Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001600

Physical Location & Seq

Genomic Coordinates Forward (+)

12298613 .. 12302449

Gene Structure 3837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1155000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2778 bp

ATGGATAAGGAGGAGAATGCTACTAGTGATGGTGATCATGAGGAGGCTTCTCAGTATGAACTAGCTGTGTGTTCGGAAGAAGACATGGAAGAAGATGTCGAGGATGACGAAGAGGATGACGAAGATGAGGAGGTGGAGGAGGACAATGGGGATGAGGAAGAGAATGTCTTGAGTTTTATAGATGGGATTAATCCTTTGGATCTTGTGGAAGATGATGGTGGTGACCAACTTTATCAGCGACTTCTGGGGGCGGATTATGAGGCTTTAGCTGAGAGAAAGAGAAAAGCACTTGTGGACAGCCGGCCCGAAGGTTCGGTTAAGAAGGCCAGGCGGGAGGATCTTACTGGAGCAAGCATGGAGGAAATAATGGAGGCCATGAATTATGGTATGCAAAGGAGATCAAGGAAGTCTAAGAAAAGGGGTAGGCGAAAAGGATCAATGAAGAAGCTAACCCCCGAGATTAATAGAATGCTTGGTGAAGCTAATCTTCACTATGCATTTGGCCGTTTTGAAGAGGCCATACCAATCTTGACAGAAGTTGTAAAGAAAGCACCAGATTTGCCTGACTCGTATCATACACTTGGAATTATCCATGACAATCTTGGTAATGAGTTGGATGCCTTGAATTGCTACAGAATTGCTGCATTTTTAGCACCAAGAGATCCAGCTCTTTGGGAACTGCTTTTTGACCGGTTCAATAAACGAGGCAACAGTCATGATGCGATTTATTGCCTTTCAAGAGCAATATCAGCAGATCCTAAAAATGTTAGTCTGAAATTTGATCGTGCTTCACTTTATGTTAAGCTTGGAGATTATCAGAAAGCAGCAGCATCTTATGAACAGATAGTACAAGCCTGTCCTGATAATGTTGAAGCACTCAAGACGGGAGCAATGATGTATGAAAGATGTGGTCAGCAAGAGCATTCTATACAGATTCTAGAGGACTATCTCAGAAATCATCCAACTGAAGCTGATCTTAGTGTCATTGATCTGATGGCTTCCATACTTATGGAAAATAACTCACATAAGGAAGCCCTTCAGCATATTGAGCATGCACAACTGGTATTCTGTTCAGAAAAAGAGATGCCTCTGGCAATGACAACTAAAGCAGGAATATGCCATGCTTACCTCGGAAATATGGAGAAGGCAGAAAGTATTTTTAGTGCTCTTGATGAGAAGAGTGCAGATAATGCTGACATGATTGCTAAAGTTGCAGAGTCATATATGAGTCTTGGGCATCATAGTTCTGCGTTGAAGTATTATTTGATGTTGAAAGGAAATGTCGAATTTAATAATGGCTTTATAATTATGAAAATCGCTCAATGTCATTTGTCCTTGAATGACAGAGTACAGGCAATTTTGTGCTTCTACGAAGCTTTAAAGACATTTGAAGATGATATTGAGGCCCGATTAACACTGGCTTCTATTCTTGTTGAAGAAGCCAGAGAAGATGAAGCCATTTTGTTGCTATCTCCTCCGAAAATTCTACATCGTATGGACCCCCAAACGGATAAATCAGAACCATGGTGGTGCAATGGAAAGGTGAAACTGAAGCTTTGCGACATTTACCGAGCTAAGGGGATGACCAAGGAATTTGTAGATACAATCTATCATCTGGTACATGCGTCACTGAGCATCGAATCACTTCAGCAAAAGGTGAAAGTGAAAAGGAGGCTCACAAAAACTGTCCTGTTAGAAAGAGTCAAAGTCCTGGAGGATCACCAAAAAGAGAACCTATTGTGTAGATCTAGACCAGTAGCTCCTGCTTCAGATCTGCTTAAAGCTGCAAGAGCGAAGAAGTTGCTTCAGAAGAAGGCAAAAGTAAAGGAAGATAAAAGAGCTGAGGCCATGGCTTCTGGAGTTGACTGGCAGAGTGATGATTCAGATGATGATCCTCCAGAAGAAATACATAAAGAACCTCCCCTGCCAGATCTTCTCAAGGATAAAGAGCATAACGACCTCATAATAGATTTGTGTAAGTCACTGGCCTCCTTGCAAAGATATTGCGAAGCATTGGAGATAATAAATCTTTTCTTGAAGGCGACTCGCAACATGTCTTCTGTTGCGGAAGAACTCAGGTCTCTTGGAGCTCAAATTGCATACAACACACCTGATCCTGAGCATGGGGTTAACTGTGTAAAATACATTGCAGACCAGCATCCATACAGCAATGCTGCCTGGAATTGCTATTACAAAGTAATTACCAGATTAGATGACTGGTATGCGAGGCATTACAAGTTTCTACGCAATAAGAGAGACAAACTCAAAGACTGTGCACCTCCCAGTCTCATTTCTGGGCATCATTTTACTAAAAAAAGCCGTCATCAAGATGCTGTGAGAGAATACCTTGAAGCTTATAAATTATTGCCAGAGAATCCCCTTATTAATCTCTGTGTTGGTACTGCCTTAGTCAACTTAGCCCTTGGACATAGACTTCAGAATAGGCACCAGTGTGTTGCACAAGGCTTAGCATTCCTCCACAACAACTTGCAGCTTTGTGAATTCAGCCAGGAGGCTTTTTACAACATAGCCAGGGCGTACCATCAAGTCGGCCTTGTGACTCTGGCAGCTTGGCATTATGACAAAGTTCTTGCAATGCAAGTGAAGGATTACCCCATGCCAAAGCTTCCCCATGAAAAGTCAGAGTCTGCTGAAAATAAAAAATTGGGTTACTGTGACCTTCGCAGAGAAGCAGCTTTTAATTTGCATCTCATCTACAAAAAGAGTGGAGCGGTTGATCTTGCTCGAACCATCTTAAGAGATCACTGCACTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_16 TPR_19 TPR_6 TPR_7 TPR_8

Protein Analysis

926

Amino Acids

105.41

Weight (kDa)

5.58

Isoelectric Point (pI)

46.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_16	PF13432	234 - 289	1.1e-06	Tetratricopeptide repeat
TPR_9	PF13371	237 - 294	5.5e-08	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001600)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17680 AT1G17680 AT1G17680
fragaria_vesca	FvH4_2g25610 FvH4_6g37900 FvH4_6g37900 FvH4_6g37900 FvH4_6g37900 FvH4_6g37900 FvH4_6g38030 FvH4_6g38030 FvH4_6g38030 FvH4_6g38030 FvH4_6g38030 FvH4_6g38050
malus_domestica	MD09G1155000.v1.1 MD17G1140900.v1.1 MD17G1141000.v1.1 MD17G1141100.v1.1
prunus_persica	Prupe.8G070000_v2.0.a1
pyrus_communis	pycom09g07370 pycom09g07380 pycom17g13410 pycom17g13440
rosa_chinensis	RchiOBHm_Chr2g0151071 RchiOBHm_Chr2g0151101 RchiOBHm_Chr6g0293861
rosa_laevigata	RLG00000011917 RLG00000020527 RLG00000020529
rosa_multiflora	Rmu_co8508109.1_g000001 Rmu_ssc0000470.1_g000002
rosa_roxburghii	Rroxscaffold_2G00096730 Rroxscaffold_7G00173850
rosa_rugosa	Rorug02G0424200 Rorug02G0424300 Rorug02G0424400 Rorug02G0424500 Rorug06G0238400
rosa_samantha	Rh2AG484900 Rh2BG497200 Rh2CG471000 Rh2DG508100 Rh6AG352000 Rh6BG358800 Rh6CG366100 Rh6CG366200 Rh6DG352800
rosa_wichuraiana	Rw2G039740 Rw6G030630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1304, 2358
AccB1I	GGYRCC	1 cut(s)	2445
AccBSI	CCGCTC	1 cut(s)	2732
AciI	CCGC	4 cut(s)	251, 331, 2066, 2732
AclWI	GGATC	8 cut(s)	207, 345, 442, 656, 749, 1725, 1886, 2108
AcoI	YGGCCR	1 cut(s)	502
AcsI	RAATTY	5 cut(s)	776, 1286, 1482, 1592, 2501
AcuI	CTGAAG	7 cut(s)	987, 1022, 1571, 1631, 1752, 1790, 2420
AfaI	GTAC	5 cut(s)	849, 1350, 1620, 2401, 2540
AfiI	CCNNNNNNNGG	3 cut(s)	1507, 1576, 2123
AflII	CTTAAG	1 cut(s)	2755
AflIII	ACRYGT	1 cut(s)	2052
AgeI	ACCGGT	1 cut(s)	690
AhlI	ACTAGT	1 cut(s)	23
AjnI	CCWGG	5 cut(s)	326, 1710, 2177, 2508, 2531
AleI	CACNNNNGTG	1 cut(s)	2451
Alw21I	GWGCWC	3 cut(s)	1168, 2092, 2278
Alw26I	GTCTC	3 cut(s)	2085, 2250, 2291
Alw44I	GTGCAC	1 cut(s)	2274
AlwI	GGATC	8 cut(s)	207, 345, 442, 656, 749, 1725, 1886, 2108
AlwNI	CAGNNNCTG	1 cut(s)	2648
Ama87I	CYCGRG	1 cut(s)	455
AoxI	GGCC	9 cut(s)	302, 324, 372, 502, 516, 1404, 1845, 1986, 2551
ApaLI	GTGCAC	1 cut(s)	2274
ApeKI	GCWGC	8 cut(s)	641, 824, 827, 1784, 2174, 2491, 2567, 2693
ApoI	RAATTY	5 cut(s)	776, 1286, 1482, 1592, 2501
AseI	ATTAAT	3 cut(s)	189, 462, 2385
AsiGI	ACCGGT	1 cut(s)	690
Asp700I	GAANNNNTTC	2 cut(s)	1035, 1644
AspS9I	GGNCC	3 cut(s)	303, 1405, 1498
AsuHPI	GGTGA	6 cut(s)	44, 233, 488, 1555, 1669, 1712
AvaI	CYCGRG	1 cut(s)	455
AvaII	GGWCC	1 cut(s)	1498
BaeGI	GKGCMC	1 cut(s)	2278
BaeI	ACNNNNGTAYC	2 cut(s)	1610, 1643
BanI	GGYRCC	1 cut(s)	2445
BanII	GRGCYC	1 cut(s)	2092
BarI	GAAGNNNNNNTAC	2 cut(s)	504, 536
BbsI	GAAGAC	2 cut(s)	87, 2049
Bbv12I	GWGCWC	3 cut(s)	1168, 2092, 2278
BbvCI	CCTCAGC	1 cut(s)	1842
BbvI	GCAGC	8 cut(s)	628, 836, 839, 1771, 2161, 2503, 2579, 2705
BccI	CCATC	6 cut(s)	23, 176, 209, 988, 2550, 2759
BceAI	ACGGC	2 cut(s)	489, 2304
BcgI	CGANNNNNNTGC	2 cut(s)	1783, 1817
BciT130I	CCWGG	5 cut(s)	328, 1712, 2179, 2510, 2533
BclI	TGATCA	1 cut(s)	34
BcoDI	GTCTC	3 cut(s)	2085, 2250, 2291
BcuI	ACTAGT	1 cut(s)	23
BfaI	CTAG	4 cut(s)	24, 62, 938, 1749
BfmI	CTRYAG	1 cut(s)	631
BfrI	CTTAAG	1 cut(s)	2755
BglII	AGATCT	3 cut(s)	1745, 1771, 1930
BisI	GCNGC	8 cut(s)	642, 825, 828, 1785, 2175, 2492, 2568, 2694
BlpI	GCTNAGC	1 cut(s)	2467
BlsI	GCNGC	8 cut(s)	643, 826, 829, 1786, 2176, 2493, 2569, 2695
Bme1390I	CCNGG	5 cut(s)	328, 1712, 2179, 2510, 2533
Bme18I	GGWCC	1 cut(s)	1498
BmeT110I	CYCGRG	1 cut(s)	455
BmgT120I	GGNCC	3 cut(s)	303, 1405, 1498
BmiI	GGNNCC	2 cut(s)	1500, 2447
BmrFI	CCNGG	5 cut(s)	328, 1712, 2179, 2510, 2533
BmrI	ACTGGG	1 cut(s)	2277
BmuI	ACTGGG	1 cut(s)	2277
BpiI	GAAGAC	2 cut(s)	87, 2049
BplI	GAGNNNNNCTC	2 cut(s)	2247, 2279
BpmI	CTGGAG	4 cut(s)	366, 1733, 1878, 1881
Bpu10I	CCTNAGC	3 cut(s)	1575, 1842, 2118
Bpu1102I	GCTNAGC	1 cut(s)	2467
BpuEI	CTTGAG	3 cut(s)	190, 863, 1922
BsaBI	GATNNNNATC	2 cut(s)	33, 1890
BsaI	GGTCTC	1 cut(s)	2085
BsaJI	CCNNGG	6 cut(s)	1129, 1523, 1587, 1848, 2422, 2532
BsaWI	WCCGGW	1 cut(s)	690
Bsc4I	CCNNNNNNNGG	3 cut(s)	1507, 1576, 2123
Bse118I	RCCGGY	2 cut(s)	300, 690
Bse1I	ACTGG	9 cut(s)	349, 1065, 1422, 1754, 1871, 1989, 2222, 2283, 2449
Bse3DI	GCAATG	6 cut(s)	897, 1101, 1540, 2145, 2176, 2601
Bse8I	GATNNNNATC	2 cut(s)	33, 1890
BseBI	CCWGG	5 cut(s)	328, 1712, 2179, 2510, 2533
BseDI	CCNNGG	6 cut(s)	1129, 1523, 1587, 1848, 2422, 2532
BseGI	GGATG	7 cut(s)	109, 121, 157, 622, 958, 1587, 2158
BseJI	GATNNNNATC	2 cut(s)	33, 1890
BseLI	CCNNNNNNNGG	3 cut(s)	1507, 1576, 2123
BseMI	GCAATG	6 cut(s)	897, 1101, 1540, 2145, 2176, 2601
BseMII	CTCAG	7 cut(s)	65, 261, 964, 1622, 1833, 2089, 2109
BseNI	ACTGG	9 cut(s)	349, 1065, 1422, 1754, 1871, 1989, 2222, 2283, 2449
BseRI	GAGGAG	5 cut(s)	26, 56, 143, 152, 1464
BseSI	GKGCMC	1 cut(s)	2278
BseXI	GCAGC	8 cut(s)	628, 836, 839, 1771, 2161, 2503, 2579, 2705
BsgI	GTGCAG	2 cut(s)	1203, 2752
BshFI	GGCC	9 cut(s)	304, 326, 374, 504, 518, 1406, 1847, 1988, 2553
BshNI	GGYRCC	1 cut(s)	2445
BshTI	ACCGGT	1 cut(s)	690
BsiHKAI	GWGCWC	3 cut(s)	1168, 2092, 2278
BsiHKCI	CYCGRG	1 cut(s)	455
BsiSI	CCGG	2 cut(s)	301, 691
BslI	CCNNNNNNNGG	3 cut(s)	1507, 1576, 2123
BsmAI	GTCTC	3 cut(s)	2085, 2250, 2291
BsmI	GAATGC	4 cut(s)	22, 474, 922, 2471
BsnI	GGCC	9 cut(s)	304, 326, 374, 504, 518, 1406, 1847, 1988, 2553
Bso31I	GGTCTC	1 cut(s)	2085
BsoBI	CYCGRG	1 cut(s)	455
Bsp1286I	GDGCHC	3 cut(s)	1168, 2092, 2278
Bsp1720I	GCTNAGC	1 cut(s)	2467
Bsp19I	CCATGG	2 cut(s)	1523, 1848
BspACI	CCGC	4 cut(s)	251, 331, 2066, 2732
BspANI	GGCC	9 cut(s)	304, 326, 374, 504, 518, 1406, 1847, 1988, 2553
BspCNI	CTCAG	7 cut(s)	64, 262, 963, 1623, 1834, 2088, 2110
BspHI	TCATGA	2 cut(s)	37, 715
BspLI	GGNNCC	2 cut(s)	1500, 2447
BspPI	GGATC	8 cut(s)	207, 345, 442, 656, 749, 1725, 1886, 2108
BspT107I	GGYRCC	1 cut(s)	2445
BspTI	CTTAAG	1 cut(s)	2755
BspTNI	GGTCTC	1 cut(s)	2085
BsrBI	CCGCTC	1 cut(s)	2732
BsrDI	GCAATG	6 cut(s)	897, 1101, 1540, 2145, 2176, 2601
BsrFI	RCCGGY	2 cut(s)	300, 690
BsrI	ACTGG	9 cut(s)	349, 1065, 1422, 1754, 1871, 1989, 2222, 2283, 2449
BssAI	RCCGGY	2 cut(s)	300, 690
BssECI	CCNNGG	6 cut(s)	1129, 1523, 1587, 1848, 2422, 2532
BssT1I	CCWWGG	4 cut(s)	1523, 1587, 1848, 2422
Bst2UI	CCWGG	5 cut(s)	328, 1712, 2179, 2510, 2533
Bst4CI	ACNGT	5 cut(s)	713, 1687, 2135, 2273, 2675
Bst6I	CTCTTC	4 cut(s)	105, 153, 507, 1172
BstAFI	CTTAAG	1 cut(s)	2755
BstAPI	GCANNNNNTGC	1 cut(s)	1190
BstC8I	GCNNGC	3 cut(s)	302, 352, 1053
BstDSI	CCRYGG	2 cut(s)	1523, 1848
BstEII	GGTNACC	1 cut(s)	221
BstF5I	GGATG	7 cut(s)	109, 121, 157, 622, 958, 1587, 2158
BstMAI	GTCTC	3 cut(s)	2085, 2250, 2291
BstMWI	GCNNNNNNNGC	7 cut(s)	650, 749, 1048, 1190, 1211, 1790, 2096
BstNI	CCWGG	5 cut(s)	328, 1712, 2179, 2510, 2533
BstNSI	RCATGY	3 cut(s)	1055, 1625, 2056
BstPI	GGTNACC	1 cut(s)	221
BstSCI	CCNGG	5 cut(s)	326, 1710, 2177, 2508, 2531
BstSFI	CTRYAG	1 cut(s)	631
BstSLI	GKGCMC	1 cut(s)	2278
BstV1I	GCAGC	8 cut(s)	628, 836, 839, 1771, 2161, 2503, 2579, 2705
BstV2I	GAAGAC	2 cut(s)	87, 2049
BstX2I	RGATCY	7 cut(s)	199, 337, 661, 754, 1745, 1771, 1930
BstXI	CCANNNNNNTGG	2 cut(s)	672, 1009
BstYI	RGATCY	7 cut(s)	199, 337, 661, 754, 1745, 1771, 1930
BsuRI	GGCC	9 cut(s)	304, 326, 374, 504, 518, 1406, 1847, 1988, 2553
BtgI	CCRYGG	2 cut(s)	1523, 1848
BtsCI	GGATG	7 cut(s)	109, 121, 157, 622, 958, 1587, 2158
BtsI	GCAGTG	1 cut(s)	2764
BtsIMutI	CAGTG	5 cut(s)	1415, 1628, 1982, 2456, 2764
Cac8I	GCNNGC	3 cut(s)	302, 352, 1053
CaiI	CAGNNNCTG	1 cut(s)	2648
CciI	TCATGA	2 cut(s)	37, 715
Cfr10I	RCCGGY	2 cut(s)	300, 690
Cfr13I	GGNCC	3 cut(s)	303, 1405, 1498
CseI	GACGC	1 cut(s)	1614
Csp6I	GTAC	5 cut(s)	848, 1349, 1619, 2400, 2539
CspAI	ACCGGT	1 cut(s)	690
CspCI	CAANNNNNGTGG	2 cut(s)	2707, 2742
CviQI	GTAC	5 cut(s)	848, 1349, 1619, 2400, 2539
DraI	TTTAAA	1 cut(s)	1380
EaeI	YGGCCR	1 cut(s)	502
Eam1104I	CTCTTC	4 cut(s)	105, 153, 507, 1172
EarI	CTCTTC	4 cut(s)	105, 153, 507, 1172
EciI	GGCGGA	1 cut(s)	266
Ecl136II	GAGCTC	1 cut(s)	2090
Eco130I	CCWWGG	4 cut(s)	1523, 1587, 1848, 2422
Eco24I	GRGCYC	1 cut(s)	2092
Eco31I	GGTCTC	1 cut(s)	2085
Eco47I	GGWCC	1 cut(s)	1498
Eco53kI	GAGCTC	1 cut(s)	2090
Eco57I	CTGAAG	7 cut(s)	987, 1022, 1571, 1631, 1752, 1790, 2420
Eco88I	CYCGRG	1 cut(s)	455
Eco91I	GGTNACC	1 cut(s)	221
EcoICRI	GAGCTC	1 cut(s)	2090
EcoO65I	GGTNACC	1 cut(s)	221
EcoRI	GAATTC	1 cut(s)	2501
EcoRII	CCWGG	5 cut(s)	326, 1710, 2177, 2508, 2531
EcoT14I	CCWWGG	4 cut(s)	1523, 1587, 1848, 2422
EcoT22I	ATGCAT	1 cut(s)	499
EcoT38I	GRGCYC	1 cut(s)	2092
ErhI	CCWWGG	4 cut(s)	1523, 1587, 1848, 2422
FalI	AAGNNNNNCTT	6 cut(s)	471, 503, 960, 992, 2538, 2570
FauI	CCCGC	1 cut(s)	324
FbaI	TGATCA	1 cut(s)	34
Fnu4HI	GCNGC	8 cut(s)	642, 825, 828, 1785, 2175, 2492, 2568, 2694
FokI	GGATG	7 cut(s)	116, 128, 164, 629, 945, 1594, 2145
FriOI	GRGCYC	1 cut(s)	2092
Fsp4HI	GCNGC	8 cut(s)	642, 825, 828, 1785, 2175, 2492, 2568, 2694
FspBI	CTAG	4 cut(s)	24, 62, 938, 1749
GluI	GCNGC	8 cut(s)	642, 825, 828, 1785, 2175, 2492, 2568, 2694
GsuI	CTGGAG	4 cut(s)	366, 1733, 1878, 1881
HaeIII	GGCC	9 cut(s)	304, 326, 374, 504, 518, 1406, 1847, 1988, 2553
HapII	CCGG	2 cut(s)	301, 691
HgaI	GACGC	1 cut(s)	1614
HincII	GTYRAC	3 cut(s)	1864, 2131, 2413
HindII	GTYRAC	3 cut(s)	1864, 2131, 2413
HindIII	AAGCTT	5 cut(s)	803, 1374, 1553, 2352, 2624
HpaI	GTTAAC	1 cut(s)	2131
HpaII	CCGG	2 cut(s)	301, 691
HphI	GGTGA	6 cut(s)	44, 233, 488, 1555, 1669, 1712
Hpy166II	GTNNAC	5 cut(s)	295, 1864, 2131, 2276, 2413
Hpy8I	GTNNAC	5 cut(s)	295, 1864, 2131, 2276, 2413
HpyAV	CCTTC	8 cut(s)	302, 316, 1046, 1138, 1807, 2032, 2599, 2690
HpyCH4III	ACNGT	5 cut(s)	713, 1687, 2135, 2273, 2675
HpyF10VI	GCNNNNNNNGC	7 cut(s)	650, 749, 1048, 1190, 1211, 1790, 2096
KroI	GCCGGC	1 cut(s)	300
KroNI	GCCGGC	1 cut(s)	302
Ksp22I	TGATCA	1 cut(s)	34
KspAI	GTTAAC	1 cut(s)	2131
LmnI	GCTCC	5 cut(s)	347, 887, 1765, 2087, 2729
Lsp1109I	GCAGC	8 cut(s)	628, 836, 839, 1771, 2161, 2503, 2579, 2705
MaeI	CTAG	4 cut(s)	24, 62, 938, 1749
MaeIII	GTNAC	6 cut(s)	221, 1626, 1980, 2557, 2669, 2675
MbiI	CCGCTC	1 cut(s)	2732
MflI	RGATCY	7 cut(s)	199, 337, 661, 754, 1745, 1771, 1930
MhlI	GDGCHC	3 cut(s)	1168, 2092, 2278
MlyI	GAGTC	7 cut(s)	560, 1226, 1237, 1710, 2038, 2554, 2654
MmeI	TCCRAC	2 cut(s)	594, 986
Mph1103I	ATGCAT	1 cut(s)	499
MroNI	GCCGGC	1 cut(s)	300
MroXI	GAANNNNTTC	2 cut(s)	1035, 1644
MslI	CAYNNNNRTG	4 cut(s)	1007, 1528, 2328, 2451
MspCI	CTTAAG	1 cut(s)	2755
MspI	CCGG	2 cut(s)	301, 691
MspR9I	CCNGG	5 cut(s)	328, 1712, 2179, 2510, 2533
Mva1269I	GAATGC	4 cut(s)	22, 474, 922, 2471
MvaI	CCWGG	5 cut(s)	328, 1712, 2179, 2510, 2533
MwoI	GCNNNNNNNGC	7 cut(s)	650, 749, 1048, 1190, 1211, 1790, 2096
NaeI	GCCGGC	1 cut(s)	302
NcoI	CCATGG	2 cut(s)	1523, 1848
NgoMIV	GCCGGC	1 cut(s)	300
NlaIV	GGNNCC	2 cut(s)	1500, 2447
NmuCI	GTSAC	5 cut(s)	221, 1626, 1980, 2557, 2675
NsiI	ATGCAT	1 cut(s)	499
NspI	RCATGY	3 cut(s)	1055, 1625, 2056
OliI	CACNNNNGTG	1 cut(s)	2451
PaeI	GCATGC	1 cut(s)	1055
PagI	TCATGA	2 cut(s)	37, 715
PciI	ACATGT	1 cut(s)	2052
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PctI	GAATGC	4 cut(s)	22, 474, 922, 2471
PdiI	GCCGGC	1 cut(s)	302
PdmI	GAANNNNTTC	2 cut(s)	1035, 1644
PfeI	GAWTC	4 cut(s)	934, 1640, 1880, 2374
PfoI	TCCNGGA	1 cut(s)	1710
PinAI	ACCGGT	1 cut(s)	690
PkrI	GCNGC	8 cut(s)	643, 826, 829, 1786, 2176, 2493, 2569, 2695
PleI	GAGTC	7 cut(s)	560, 1225, 1236, 1709, 2038, 2554, 2653
PpsI	GAGTC	7 cut(s)	560, 1225, 1236, 1709, 2038, 2554, 2653
PscI	ACATGT	1 cut(s)	2052
PshBI	ATTAAT	3 cut(s)	189, 462, 2385
PsiI	TTATAA	2 cut(s)	1304, 2358
Psp124BI	GAGCTC	1 cut(s)	2092
Psp6I	CCWGG	5 cut(s)	326, 1710, 2177, 2508, 2531
PspEI	GGTNACC	1 cut(s)	221
PspGI	CCWGG	5 cut(s)	326, 1710, 2177, 2508, 2531
PspN4I	GGNNCC	2 cut(s)	1500, 2447
PspPI	GGNCC	3 cut(s)	303, 1405, 1498
PsrI	GAACNNNNNNTAC	2 cut(s)	831, 863
PstNI	CAGNNNCTG	1 cut(s)	2648
PsuI	RGATCY	7 cut(s)	199, 337, 661, 754, 1745, 1771, 1930
RsaI	GTAC	5 cut(s)	849, 1350, 1620, 2401, 2540
RsaNI	GTAC	5 cut(s)	848, 1349, 1619, 2400, 2539
RseI	CAYNNNNRTG	4 cut(s)	1007, 1528, 2328, 2451
SacI	GAGCTC	1 cut(s)	2092
SatI	GCNGC	8 cut(s)	642, 825, 828, 1785, 2175, 2492, 2568, 2694
Sau96I	GGNCC	3 cut(s)	303, 1405, 1498
SchI	GAGTC	7 cut(s)	560, 1226, 1237, 1710, 2038, 2554, 2654
ScrFI	CCNGG	5 cut(s)	328, 1712, 2179, 2510, 2533
SduI	GDGCHC	3 cut(s)	1168, 2092, 2278
SfcI	CTRYAG	1 cut(s)	631
SinI	GGWCC	1 cut(s)	1498
SmiMI	CAYNNNNRTG	4 cut(s)	1007, 1528, 2328, 2451
SmlI	CTYRAG	4 cut(s)	169, 878, 1937, 2755
SmoI	CTYRAG	4 cut(s)	169, 878, 1937, 2755
SpeI	ACTAGT	1 cut(s)	23
SphI	GCATGC	1 cut(s)	1055
SsiI	CCGC	4 cut(s)	251, 331, 2066, 2732
SspMI	CTAG	4 cut(s)	24, 62, 938, 1749
SstI	GAGCTC	1 cut(s)	2092
StyD4I	CCNGG	5 cut(s)	326, 1710, 2177, 2508, 2531
StyI	CCWWGG	4 cut(s)	1523, 1587, 1848, 2422
TaaI	ACNGT	5 cut(s)	713, 1687, 2135, 2273, 2675
TaqI	TCGA	4 cut(s)	99, 1284, 1638, 2746
TatI	WGTACW	2 cut(s)	847, 1348
TfiI	GAWTC	4 cut(s)	934, 1640, 1880, 2374
TscAI	CASTG	5 cut(s)	1422, 1635, 1989, 2456, 2771
TseFI	GTSAC	5 cut(s)	221, 1626, 1980, 2557, 2675
TseI	GCWGC	8 cut(s)	641, 824, 827, 1784, 2174, 2491, 2567, 2693
Tsp45I	GTSAC	5 cut(s)	221, 1626, 1980, 2557, 2675
TspDTI	ATGAA	8 cut(s)	72, 392, 455, 852, 915, 1325, 1467, 2649
TspGWI	ACGGA	1 cut(s)	1523
TspRI	CASTG	5 cut(s)	1422, 1635, 1989, 2456, 2771
Vha464I	CTTAAG	1 cut(s)	2755
VneI	GTGCAC	1 cut(s)	2274
VpaK11BI	GGWCC	1 cut(s)	1498
VspI	ATTAAT	3 cut(s)	189, 462, 2385
XapI	RAATTY	5 cut(s)	776, 1286, 1482, 1592, 2501
XbaI	TCTAGA	2 cut(s)	937, 1748
XceI	RCATGY	3 cut(s)	1055, 1625, 2056
XcmI	CCANNNNNNNNNTGG	1 cut(s)	599
XmnI	GAANNNNTTC	2 cut(s)	1035, 1644
XspI	CTAG	4 cut(s)	24, 62, 938, 1749
Zsp2I	ATGCAT	1 cut(s)	499

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.