Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0003616

Physical Location & Seq

Genomic Coordinates Forward (+)

24270287 .. 24275202

Gene Structure 4916 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g31730.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGGCACTGAGACGTCTGCTGACTCAGGTATCAAGGCATAGATCAGAGTTGGGACAGCTGAACAAAGTCGTTGCCAGAACATATTTTCCAGTCAACAGGGTTGCAGGAGGTGCTGGAGGGAATACAGTTTTTAATACTCAAGAGAGGTTTCAGTCAAGCTATGTGCGCAGTTTTGCTCGCAGAGCACGTGAACTTGATGAAGTTAATGAACTTGCCTATCTAAAAGAACTGTCCATGCGGAATGACCCTGAAGAAGTGATACGATTATTTGAAAGTACACCATCATTGCATTCCAACTCTTCAGCGCTTTCAGAATATGTGAAATCATTGGTAAAAGTTGGCAGGCTGGATGAGAGTGAGTTACTGAAGACATTGCAGAGAGGTGTAGCCAACTCTGCAAGGGAGGACGAAAACGTGGGCAGCTTCTCAGTTCTTAGGAATGTTGGAAAGTCTACGAAAGATGGTGTTTTGGGAACTGCAAGTGCACCTATTCATATGGTGGCTAGAGAAGGAGGTCATTTTAAAGAGCAGCTGTGGCGAACCGTTCGCACAATTGCACTAGCCTTTCTTTTAATATCTGGTGTGGGAGCACTGATTGAAGATAGAGGAATAAGCAAAGGACTTGGACTAAATGAAGAGGTTCAACCTAGCATGGAATCTAGCACAAAGTTTACTGACGTGAAGGGAGTTGATGAGGCTAAGGCAGAGCTAGAAGAAATTGTACACTATCTCCGAGATCCTAAGCGTTTCACTCGTCTTGGGGGCAAGCTTCCAAAGGGTGTTTTGCTGGTTGGCCCACCTGGCACTGGCAAGACGATGTTAGCAAGAGCAATTGCTGGAGAAGCAGGGGTACCTTTCTTTTCATGCAGCGGCAGTGAATTTGAAGAGATGTTTGTTGGTGTTGGAGCTCGAAGGGTGAGGGATCTCTTTGCAGCTGCAAAGAAGCGGTCACCATGTATAATTTTTATTGATGAGATTGATGCAATAGGAGGAAGTCGCAACCCAAAGGATCAGCAATACATGAAGATGACTCTGAATCAGTTACTTGTTGAACTTGATGGTTTTAAGCAAAATGAAGGAATTATTGTTATTGCTGCTACCAATTTCCCAGAGTCGCTGGACAAGGCATTGGTGAGACCTGGACGGTTTGATCGCCACATTGTTGTTCCCAATCCTGACGTTGAAGGGCGGAGGCAGATTATGGAAGTCCATATGTCAAAGGTTCTGAAAGCTGATGATGTTGATCTGATGATCATTGCTAGAGGAACTCCTGGGTTCTCTGGTGCCGATCTTGCCAACTTAATCAACGTAGCTGCTCTGAAGGCTGCCATGGATGGTGCTAAGGCAGTGAATATGGCTGATCTGGAGTATGCAAAAGACAAGATTATGATGGGAAGTGAACGAAAGTCGGCTGTTATATCTGATGAGTCACGAAAGCTAACAGCTTTTCATGAGGGCGGCCATGCACTTGTGGCTATCCACACTGACGGTGCGCATCCAGTTCACAAGGCAACAATAGTTCCCCGTGGTATGGCACTTGGCATGGTTGCCCAGTTGCCCGAGAAAGATGAGACAAGTGTCTCACGGAAACAGATGCTTGCGCGGCTTGACGTTTGCATGGGGGGAAGGGTTGCAGAAGAGCTCATATTTGGTGAAAGCGAAGTTACTTCAGGTGCTTCTGATGATCTCCGGCAAGCTACTTCTCTTGCCAGAGCAATGGTTACCAAGTATGGCATGAGCAAAGAAGTGGGGCTTGTTACTCACAATTATGATGACAATGGGAAGAGCATGAGCACAGAAACTAGGCTGCTTATTGAAGAAGAAGTGAGGCGCCTCTTGGAAACGGCTTACAACAATGCAAAGAATATACTTACCACTCATCACAAGGAGCTCCATGCTCTCGCTAATGCCTTGCTGGAGAAAGAGACGCTCACTGGAAAACAGATCAAGGCCTTGCTTGCTAACTTGAACTCTCAGCAAAATCAACAACCGCAACAGCAAGTCATTGCGGAAAAGAGTAGTTCACAGTCAAACCCAGTGCCTCCTCCATCAACACCCAATGCAGCTCAGTCTGCTGCTGCTGCAGCAGCCGCGGCGGCGGCGGCAGCAACCGCTGCTGCCAAATCAAAAGGCATGGCTCCTGCGTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009888 GO:0009941 GO:0010073 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

717

Amino Acids

77.51

Weight (kDa)

8.76

Isoelectric Point (pI)

44.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TIP49	PF06068	41 - 129	3.8e-06	TIP49 P-loop domain
AAA_5	PF07728	95 - 165	2.9e-06	AAA domain (dynein-related subfamily)
AAA	PF00004	96 - 225	2.5e-46	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	248 - 291	4.3e-12	AAA+ lid domain
Peptidase_M41	PF01434	307 - 487	1.8e-68	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26140
fragaria_vesca	FvH4_1g07720 FvH4_2g31730 FvH4_2g31730
malus_domestica	MD08G1063300.v1.1 MD15G1058100.v1.1 MD15G1058500.v1.1
prunus_persica	Prupe.1G410800_v2.0.a1
pyrus_communis	pycom08g05200 pycom15g05470 pycom15g05500
rosa_chinensis	RchiOBHm_Chr2g0093601 RchiOBHm_Chr6g0311091
rosa_laevigata	RLG00000010436 RLG00000016420
rosa_multiflora	Rmu_co8327861.1_g000001 Rmu_co8491229.1_g000001 Rmu_sc0002126.1_g000022 Rmu_sc0008967.1_g000002 Rmu_sc0012235.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147960 Rroxscaffold_7G00158030
rosa_rugosa	Rorug02G0037800 Rorug02G0037800 Rorug06G0385300 Rorug06G0385400
rosa_samantha	Rh2AG084300 Rh2BG084900 Rh2CG087200 Rh2DG082900 Rh6AG499400 Rh6BG509900 Rh6CG515700 Rh6DG502300
rosa_wichuraiana	Rw6G043500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	16
Acc16I	TGCGCA	2 cut(s)	167, 1494
Acc65I	GGTACC	1 cut(s)	850
AccB1I	GGYRCC	3 cut(s)	850, 1283, 1830
AccI	GTMKAC	1 cut(s)	452
AccII	CGCG	2 cut(s)	1603, 2093
AclWI	GGATC	3 cut(s)	731, 930, 1017
AcoI	YGGCCR	1 cut(s)	1459
AcsI	RAATTY	1 cut(s)	878
AcuI	CTGAAG	5 cut(s)	270, 285, 386, 1340, 1653
AcvI	CACGTG	1 cut(s)	188
AcyI	GRCGYC	2 cut(s)	13, 1831
AfaI	GTAC	3 cut(s)	277, 723, 852
AfeI	AGCGCT	1 cut(s)	306
AfiI	CCNNNNNNNGG	2 cut(s)	806, 1531
AgsI	TTSAA	8 cut(s)	272, 599, 644, 884, 1052, 1184, 1817, 1969
AjiI	CACGTC	1 cut(s)	679
AjnI	CCWGG	3 cut(s)	799, 1138, 1270
AloI	GAACNNNNNNTCC	2 cut(s)	70, 102
Alw21I	GWGCWC	7 cut(s)	187, 487, 592, 910, 1644, 1796, 1893
Alw26I	GTCTC	5 cut(s)	4, 1129, 1565, 1585, 1919
Alw44I	GTGCAC	1 cut(s)	483
AlwI	GGATC	3 cut(s)	731, 930, 1017
Ama87I	CYCGRG	1 cut(s)	1559
Aor51HI	AGCGCT	1 cut(s)	306
AoxI	GGCC	3 cut(s)	793, 1459, 1950
ApaLI	GTGCAC	1 cut(s)	483
ApoI	RAATTY	1 cut(s)	878
ArsI	GACNNNNNNTTYG	2 cut(s)	932, 964
Asp700I	GAANNNNTTC	1 cut(s)	639
Asp718I	GGTACC	1 cut(s)	850
AspLEI	GCGC	5 cut(s)	168, 307, 1495, 1603, 1833
AspS9I	GGNCC	1 cut(s)	794
AsuHPI	GGTGA	4 cut(s)	928, 942, 1144, 1664
AvaI	CYCGRG	1 cut(s)	1559
BaeGI	GKGCMC	1 cut(s)	487
BaeI	ACNNNNGTAYC	2 cut(s)	12, 45
BanI	GGYRCC	3 cut(s)	850, 1283, 1830
BanII	GRGCYC	3 cut(s)	910, 1644, 1893
BarI	GAAGNNNNNNTAC	6 cut(s)	243, 275, 705, 737, 834, 866
BbrPI	CACGTG	1 cut(s)	188
BbsI	GAAGAC	1 cut(s)	374
Bbv12I	GWGCWC	7 cut(s)	187, 487, 592, 910, 1644, 1796, 1893
BccI	CCATC	6 cut(s)	289, 455, 1052, 1328, 1384, 2056
BceAI	ACGGC	1 cut(s)	1860
BciT130I	CCWGG	3 cut(s)	801, 1140, 1272
BclI	TGATCA	1 cut(s)	1251
BcoDI	GTCTC	5 cut(s)	4, 1129, 1565, 1585, 1919
BfaI	CTAG	7 cut(s)	504, 560, 648, 660, 710, 1260, 1803
BfmI	CTRYAG	1 cut(s)	2082
BfoI	RGCGCY	2 cut(s)	308, 1834
BglI	GCCNNNNNGGC	2 cut(s)	801, 2096
Bme1390I	CCNGG	3 cut(s)	801, 1140, 1272
BmeT110I	CYCGRG	1 cut(s)	1559
BmgBI	CACGTC	1 cut(s)	679
BmgT120I	GGNCC	1 cut(s)	794
BmiI	GGNNCC	4 cut(s)	852, 1285, 1832, 2139
BmrFI	CCNGG	3 cut(s)	801, 1140, 1272
BmrI	ACTGGG	2 cut(s)	1546, 2030
BmsI	GCATC	3 cut(s)	970, 1504, 1584
BmuI	ACTGGG	2 cut(s)	1546, 2030
BoxI	GACNNNNGTC	1 cut(s)	1577
BpiI	GAAGAC	1 cut(s)	374
BpmI	CTGGAG	4 cut(s)	135, 858, 1385, 1937
Bpu10I	CCTNAGC	3 cut(s)	699, 741, 1341
BpuEI	CTTGAG	1 cut(s)	123
BsaAI	YACGTR	1 cut(s)	188
BsaBI	GATNNNNATC	1 cut(s)	1242
BsaHI	GRCGYC	2 cut(s)	13, 1831
BsaI	GGTCTC	1 cut(s)	1129
BsaJI	CCNNGG	4 cut(s)	1271, 1329, 1525, 2091
BsaXI	ACNNNNNCTCC	2 cut(s)	714, 744
Bsc4I	CCNNNNNNNGG	2 cut(s)	806, 1531
Bse1I	ACTGG	6 cut(s)	89, 811, 1499, 1552, 1939, 2036
Bse3DI	GCAATG	5 cut(s)	284, 371, 1254, 1722, 2004
Bse8I	GATNNNNATC	1 cut(s)	1242
BseBI	CCWGG	3 cut(s)	801, 1140, 1272
BseDI	CCNNGG	4 cut(s)	1271, 1329, 1525, 2091
BseGI	GGATG	3 cut(s)	355, 1339, 1495
BseJI	GATNNNNATC	1 cut(s)	1242
BseLI	CCNNNNNNNGG	2 cut(s)	806, 1531
BseMI	GCAATG	5 cut(s)	284, 371, 1254, 1722, 2004
BseMII	CTCAG	4 cut(s)	38, 441, 1988, 2081
BseNI	ACTGG	6 cut(s)	89, 811, 1499, 1552, 1939, 2036
BseRI	GAGGAG	1 cut(s)	2034
BseSI	GKGCMC	1 cut(s)	487
Bsh1236I	CGCG	2 cut(s)	1603, 2093
BshFI	GGCC	3 cut(s)	795, 1461, 1952
BshNI	GGYRCC	3 cut(s)	850, 1283, 1830
BsiHKAI	GWGCWC	7 cut(s)	187, 487, 592, 910, 1644, 1796, 1893
BsiHKCI	CYCGRG	1 cut(s)	1559
BsiSI	CCGG	1 cut(s)	1690
BslFI	GGGAC	1 cut(s)	66
BslI	CCNNNNNNNGG	2 cut(s)	806, 1531
BsmAI	GTCTC	5 cut(s)	4, 1129, 1565, 1585, 1919
BsmBI	CGTCTC	2 cut(s)	4, 1919
BsmFI	GGGAC	1 cut(s)	66
BsmI	GAATGC	1 cut(s)	289
BsnI	GGCC	3 cut(s)	795, 1461, 1952
Bso31I	GGTCTC	1 cut(s)	1129
BsoBI	CYCGRG	1 cut(s)	1559
Bsp1286I	GDGCHC	7 cut(s)	187, 487, 592, 910, 1644, 1796, 1893
Bsp1407I	TGTACA	1 cut(s)	721
Bsp19I	CCATGG	1 cut(s)	1329
BspANI	GGCC	3 cut(s)	795, 1461, 1952
BspCNI	CTCAG	4 cut(s)	37, 440, 1987, 2080
BspFNI	CGCG	2 cut(s)	1603, 2093
BspHI	TCATGA	1 cut(s)	1450
BspLI	GGNNCC	4 cut(s)	852, 1285, 1832, 2139
BspMAI	CTGCAG	1 cut(s)	2086
BspPI	GGATC	3 cut(s)	731, 930, 1017
BspQI	GCTCTTC	2 cut(s)	1632, 1778
BspT107I	GGYRCC	3 cut(s)	850, 1283, 1830
BspTNI	GGTCTC	1 cut(s)	1129
BsrDI	GCAATG	5 cut(s)	284, 371, 1254, 1722, 2004
BsrGI	TGTACA	1 cut(s)	721
BsrI	ACTGG	6 cut(s)	89, 811, 1499, 1552, 1939, 2036
BssECI	CCNNGG	4 cut(s)	1271, 1329, 1525, 2091
BssNI	GRCGYC	2 cut(s)	13, 1831
BssT1I	CCWWGG	1 cut(s)	1329
Bst2UI	CCWGG	3 cut(s)	801, 1140, 1272
Bst4CI	ACNGT	6 cut(s)	127, 231, 544, 1146, 1490, 2028
Bst6I	CTCTTC	5 cut(s)	304, 630, 879, 1632, 1778
BstACI	GRCGYC	2 cut(s)	13, 1831
BstAPI	GCANNNNNTGC	2 cut(s)	110, 2114
BstAUI	TGTACA	1 cut(s)	721
BstBAI	YACGTR	1 cut(s)	188
BstC8I	GCNNGC	6 cut(s)	178, 344, 767, 1599, 1695, 1959
BstDSI	CCRYGG	3 cut(s)	1329, 1525, 2091
BstEII	GGTNACC	2 cut(s)	948, 1720
BstF5I	GGATG	3 cut(s)	355, 1339, 1495
BstFNI	CGCG	2 cut(s)	1603, 2093
BstH2I	RGCGCY	2 cut(s)	308, 1834
BstHHI	GCGC	5 cut(s)	168, 307, 1495, 1603, 1833
BstMAI	GTCTC	5 cut(s)	4, 1129, 1565, 1585, 1919
BstNI	CCWGG	3 cut(s)	801, 1140, 1272
BstPAI	GACNNNNGTC	1 cut(s)	1577
BstPI	GGTNACC	2 cut(s)	948, 1720
BstSCI	CCNGG	3 cut(s)	799, 1138, 1270
BstSFI	CTRYAG	1 cut(s)	2082
BstSLI	GKGCMC	1 cut(s)	487
BstUI	CGCG	2 cut(s)	1603, 2093
BstV2I	GAAGAC	1 cut(s)	374
BstX2I	RGATCY	2 cut(s)	736, 922
BstXI	CCANNNNNNTGG	1 cut(s)	1717
BstYI	RGATCY	2 cut(s)	736, 922
BsuRI	GGCC	3 cut(s)	795, 1461, 1952
BtgI	CCRYGG	3 cut(s)	1329, 1525, 2091
BtrI	CACGTC	1 cut(s)	679
BtsCI	GGATG	3 cut(s)	355, 1339, 1495
BtsI	GCAGTG	2 cut(s)	880, 1353
BtsIMutI	CAGTG	8 cut(s)	5, 590, 804, 880, 1353, 1482, 1932, 2043
Cac8I	GCNNGC	6 cut(s)	178, 344, 767, 1599, 1695, 1959
CciI	TCATGA	1 cut(s)	1450
CfoI	GCGC	5 cut(s)	168, 307, 1495, 1603, 1833
Cfr13I	GGNCC	1 cut(s)	794
Cfr42I	CCGCGG	1 cut(s)	2094
CseI	GACGC	2 cut(s)	1936, 2133
Csp6I	GTAC	3 cut(s)	276, 722, 851
CviQI	GTAC	3 cut(s)	276, 722, 851
DinI	GGCGCC	1 cut(s)	1832
DraI	TTTAAA	1 cut(s)	523
EaeI	YGGCCR	1 cut(s)	1459
Eam1104I	CTCTTC	5 cut(s)	304, 630, 879, 1632, 1778
EarI	CTCTTC	5 cut(s)	304, 630, 879, 1632, 1778
EciI	GGCGGA	1 cut(s)	1204
Ecl136II	GAGCTC	3 cut(s)	908, 1642, 1891
Eco130I	CCWWGG	1 cut(s)	1329
Eco147I	AGGCCT	1 cut(s)	1952
Eco24I	GRGCYC	3 cut(s)	910, 1644, 1893
Eco31I	GGTCTC	1 cut(s)	1129
Eco47III	AGCGCT	1 cut(s)	306
Eco53kI	GAGCTC	3 cut(s)	908, 1642, 1891
Eco57I	CTGAAG	5 cut(s)	270, 285, 386, 1340, 1653
Eco72I	CACGTG	1 cut(s)	188
Eco88I	CYCGRG	1 cut(s)	1559
Eco91I	GGTNACC	2 cut(s)	948, 1720
EcoICRI	GAGCTC	3 cut(s)	908, 1642, 1891
EcoO65I	GGTNACC	2 cut(s)	948, 1720
EcoRII	CCWGG	3 cut(s)	799, 1138, 1270
EcoT14I	CCWWGG	1 cut(s)	1329
EcoT38I	GRGCYC	3 cut(s)	910, 1644, 1893
EgeI	GGCGCC	1 cut(s)	1832
EheI	GGCGCC	1 cut(s)	1832
ErhI	CCWWGG	1 cut(s)	1329
Esp3I	CGTCTC	2 cut(s)	4, 1919
FalI	AAGNNNNNCTT	2 cut(s)	1737, 1769
FaqI	GGGAC	1 cut(s)	66
FauNDI	CATATG	2 cut(s)	495, 1212
FbaI	TGATCA	1 cut(s)	1251
FblI	GTMKAC	1 cut(s)	452
FokI	GGATG	3 cut(s)	362, 1346, 1482
FriOI	GRGCYC	3 cut(s)	910, 1644, 1893
FspAI	RTGCGCAY	1 cut(s)	1494
FspBI	CTAG	7 cut(s)	504, 560, 648, 660, 710, 1260, 1803
FspI	TGCGCA	2 cut(s)	167, 1494
GlaI	GCGC	5 cut(s)	167, 306, 1494, 1602, 1832
GsuI	CTGGAG	4 cut(s)	135, 858, 1385, 1937
HaeII	RGCGCY	2 cut(s)	308, 1834
HaeIII	GGCC	3 cut(s)	795, 1461, 1952
HapII	CCGG	1 cut(s)	1690
HgaI	GACGC	2 cut(s)	1936, 2133
HhaI	GCGC	5 cut(s)	168, 307, 1495, 1603, 1833
Hin1I	GRCGYC	2 cut(s)	13, 1831
Hin6I	GCGC	5 cut(s)	166, 305, 1493, 1601, 1831
HinP1I	GCGC	5 cut(s)	166, 305, 1493, 1601, 1831
HincII	GTYRAC	1 cut(s)	94
HindII	GTYRAC	1 cut(s)	94
HindIII	AAGCTT	1 cut(s)	767
HinfI	GANTC	6 cut(s)	22, 656, 1030, 1036, 1112, 1427
HpaII	CCGG	1 cut(s)	1690
HphI	GGTGA	4 cut(s)	928, 942, 1144, 1664
Hpy188I	TCNGA	9 cut(s)	46, 313, 734, 1035, 1227, 1248, 1320, 1423, 1681
Hpy188III	TCNNGA	5 cut(s)	140, 1175, 1364, 1431, 1451
HpyAV	CCTTC	7 cut(s)	503, 676, 906, 1070, 1178, 1315, 1620
HpyCH4III	ACNGT	6 cut(s)	127, 231, 544, 1146, 1490, 2028
HpyCH4IV	ACGT	7 cut(s)	13, 187, 414, 678, 1179, 1308, 1611
HpySE526I	ACGT	7 cut(s)	13, 187, 414, 678, 1179, 1308, 1611
Hsp92I	GRCGYC	2 cut(s)	13, 1831
HspAI	GCGC	5 cut(s)	166, 305, 1493, 1601, 1831
KasI	GGCGCC	1 cut(s)	1830
KpnI	GGTACC	1 cut(s)	854
Ksp22I	TGATCA	1 cut(s)	1251
KspI	CCGCGG	1 cut(s)	2094
LguI	GCTCTTC	2 cut(s)	1632, 1778
LmnI	GCTCC	5 cut(s)	587, 905, 1888, 1896, 2143
LweI	GCATC	3 cut(s)	970, 1504, 1584
MaeI	CTAG	7 cut(s)	504, 560, 648, 660, 710, 1260, 1803
MaeII	ACGT	7 cut(s)	13, 187, 414, 678, 1179, 1308, 1611
MaeIII	GTNAC	7 cut(s)	360, 948, 1041, 1428, 1663, 1720, 1756
MfeI	CAATTG	2 cut(s)	552, 831
MflI	RGATCY	2 cut(s)	736, 922
MhlI	GDGCHC	7 cut(s)	187, 487, 592, 910, 1644, 1796, 1893
MluCI	AATT	8 cut(s)	552, 717, 831, 878, 960, 1080, 1102, 1765
Mly113I	GGCGCC	1 cut(s)	1831
MlyI	GAGTC	4 cut(s)	16, 1024, 1121, 1436
MmeI	TCCRAC	3 cut(s)	318, 424, 883
MroXI	GAANNNNTTC	1 cut(s)	639
MseI	TTAA	6 cut(s)	132, 204, 522, 572, 1065, 1301
MslI	CAYNNNNRTG	2 cut(s)	1025, 1767
MspA1I	CMGCKG	6 cut(s)	58, 532, 870, 935, 2093, 2114
MspI	CCGG	1 cut(s)	1690
MspR9I	CCNGG	3 cut(s)	801, 1140, 1272
MunI	CAATTG	2 cut(s)	552, 831
Mva1269I	GAATGC	1 cut(s)	289
MvaI	CCWGG	3 cut(s)	801, 1140, 1272
MvnI	CGCG	2 cut(s)	1603, 2093
NarI	GGCGCC	1 cut(s)	1831
NcoI	CCATGG	1 cut(s)	1329
NdeI	CATATG	2 cut(s)	495, 1212
NlaIV	GGNNCC	4 cut(s)	852, 1285, 1832, 2139
NmuCI	GTSAC	2 cut(s)	948, 1428
NsbI	TGCGCA	2 cut(s)	167, 1494
PagI	TCATGA	1 cut(s)	1450
PceI	AGGCCT	1 cut(s)	1952
PciSI	GCTCTTC	2 cut(s)	1632, 1778
PcsI	WCGNNNNNNNCGW	1 cut(s)	184
PctI	GAATGC	1 cut(s)	289
PdmI	GAANNNNTTC	1 cut(s)	639
PfeI	GAWTC	2 cut(s)	656, 1036
PleI	GAGTC	4 cut(s)	16, 1024, 1120, 1435
PluTI	GGCGCC	1 cut(s)	1834
PmaCI	CACGTG	1 cut(s)	188
PmlI	CACGTG	1 cut(s)	188
PpsI	GAGTC	4 cut(s)	16, 1024, 1120, 1435
Ppu21I	YACGTR	1 cut(s)	188
PshAI	GACNNNNGTC	1 cut(s)	1577
Psp124BI	GAGCTC	3 cut(s)	910, 1644, 1893
Psp6I	CCWGG	3 cut(s)	799, 1138, 1270
PspCI	CACGTG	1 cut(s)	188
PspEI	GGTNACC	2 cut(s)	948, 1720
PspGI	CCWGG	3 cut(s)	799, 1138, 1270
PspN4I	GGNNCC	4 cut(s)	852, 1285, 1832, 2139
PspPI	GGNCC	1 cut(s)	794
PstI	CTGCAG	1 cut(s)	2086
PsuI	RGATCY	2 cut(s)	736, 922
PvuII	CAGCTG	3 cut(s)	58, 532, 935
RsaI	GTAC	3 cut(s)	277, 723, 852
RsaNI	GTAC	3 cut(s)	276, 722, 851
RseI	CAYNNNNRTG	2 cut(s)	1025, 1767
SacI	GAGCTC	3 cut(s)	910, 1644, 1893
SacII	CCGCGG	1 cut(s)	2094
SapI	GCTCTTC	2 cut(s)	1632, 1778
SaqAI	TTAA	6 cut(s)	132, 204, 522, 572, 1065, 1301
Sau96I	GGNCC	1 cut(s)	794
SchI	GAGTC	4 cut(s)	16, 1024, 1121, 1436
ScrFI	CCNGG	3 cut(s)	801, 1140, 1272
SduI	GDGCHC	7 cut(s)	187, 487, 592, 910, 1644, 1796, 1893
SfaNI	GCATC	3 cut(s)	970, 1504, 1584
SfcI	CTRYAG	1 cut(s)	2082
SfoI	GGCGCC	1 cut(s)	1832
Sfr303I	CCGCGG	1 cut(s)	2094
SgrBI	CCGCGG	1 cut(s)	2094
SmiMI	CAYNNNNRTG	2 cut(s)	1025, 1767
SmlI	CTYRAG	1 cut(s)	138
SmoI	CTYRAG	1 cut(s)	138
Sse9I	AATT	8 cut(s)	552, 717, 831, 878, 960, 1080, 1102, 1765
SseBI	AGGCCT	1 cut(s)	1952
SspDI	GGCGCC	1 cut(s)	1830
SspMI	CTAG	7 cut(s)	504, 560, 648, 660, 710, 1260, 1803
SstI	GAGCTC	3 cut(s)	910, 1644, 1893
StuI	AGGCCT	1 cut(s)	1952
StyD4I	CCNGG	3 cut(s)	799, 1138, 1270
StyI	CCWWGG	1 cut(s)	1329
TaaI	ACNGT	6 cut(s)	127, 231, 544, 1146, 1490, 2028
TaiI	ACGT	7 cut(s)	16, 190, 417, 681, 1182, 1311, 1614
TaqI	TCGA	1 cut(s)	910
TasI	AATT	8 cut(s)	552, 717, 831, 878, 960, 1080, 1102, 1765
TatI	WGTACW	2 cut(s)	275, 721
TauI	GCSGC	8 cut(s)	873, 1461, 1606, 2093, 2096, 2099, 2102, 2105
TfiI	GAWTC	2 cut(s)	656, 1036
Tru1I	TTAA	6 cut(s)	132, 204, 522, 572, 1065, 1301
Tru9I	TTAA	6 cut(s)	132, 204, 522, 572, 1065, 1301
TscAI	CASTG	8 cut(s)	12, 597, 811, 880, 1353, 1489, 1939, 2043
TseFI	GTSAC	2 cut(s)	948, 1428
Tsp45I	GTSAC	2 cut(s)	948, 1428
TspDTI	ATGAA	8 cut(s)	213, 222, 482, 648, 852, 1037, 1089, 1439
TspGWI	ACGGA	1 cut(s)	1600
TspRI	CASTG	8 cut(s)	12, 597, 811, 880, 1353, 1489, 1939, 2043
VneI	GTGCAC	1 cut(s)	483
XapI	RAATTY	1 cut(s)	878
XmiI	GTMKAC	1 cut(s)	452
XmnI	GAANNNNTTC	1 cut(s)	639
XspI	CTAG	7 cut(s)	504, 560, 648, 660, 710, 1260, 1803
ZraI	GACGTC	1 cut(s)	14

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.