Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003616

Physical Location & Seq

Genomic Coordinates Reverse (-)

70598140 .. 70602919

Gene Structure 4780 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG509900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCCCTGAGACGCCTGCTCACTCAGGTATCTAAGCATCGATCAGAGTTGAGACAGCTGAAACAAGTTGTTTCTAGAACATATTTTCCGGTCAACAGGGTTGCAGGAGGTGCTGGAGGGAATACAATTTTTAATACTCAAGAGAGGTGTCAGTCAAGCTATGTGCGCAATTTGGCTCGCAGAGGACGTGATGTTGATGAAGCTAATGAACTTGCCTATCTAAAAGAACTGTCCATGCGAAATGACCCTGAAGAAGTGATCAGATTATTTGAAAGTCAACCATCATTGCATTCCAACTCTTCAGCGCTTTCAGAATATGTGAAAGCATTGGTAAAAGTTGGAAGGCTGGATGAGAGTGAGTTACTGAAGACATTGCAGAGAGGTGTATCCAACTCTGCAAGGGAGGATGAAAGCATGGGTGGCTTCTCAGTTCTTAGGAACGTTGGGAAGTCTACAAAAGATGGCGTTCTTGGAACTGCAAGTGCACCTATTCATATGGTGGCTAGAGAAGGAGGTCATTTTAAAGAGCAGCTGTGGCGTACAGTTCGCACAATTGCACTAGCCTTTCTTTTGATATCTGGCGTTGGAGCACTCATTGAGGATAGAGGAATAAGCAAAGGACTTGGATTAAATGAAGAGGTCCAACCTAGCATGGAATCTAGCACTAAGTTTAGCGATGTCAAAGGAGTTGATGAGGCTAAGGCGGAGCTAGAAGAAATTGTTCACTATCTTCGAGATCCCAAGGTTATGAAGGCTGATGATGTTGATTTGATGATCATTGCTAGAGGAACTCCTGGGTTCTCCGGTGCTGATCTGGCCAACTTGATCAACGTAGCTGCTCTTAAGGCTGCCATGGATGGCGCTAAAGCAGTGAGTATGGCTGATCTGGAGTATGCAAAAGACAAGATTATGATGGGAAGTGAGCGAAAGTCAGCTGTCATATCTGATGAGTCACGAAAGCTAACAGCTTTTCATGAGGGTGGCCATGCACTTGTGGCTGTTCACACTGATGGTGCCCATCCAGTTCACAAGGCAACAATAGTTCCCCGTGGTATGGCACTTGGCATGGTTGCCCAGTTGCCCGAAAAGGATGAGACAAGTGTCTCACGGAAACAGATGCTTGCGCGGCTTGATGTTTGCATGGGGGGACGGGTTGCAGAAGAGCTCATCTTTGGTGAAAGTGAAGTAACTTCTGGTGCTTCTGACGATCTCCGGCAAGCAACTGCTCTTGCCAGAGCAATGGTTACAAAGTATGGTATGAGCAAAGAAGTGGGGCTTGTCACTCACAATTATGACGACAATGGGAAGAGCATGAGCACAGAAACTAGGCTGCTTATTGAAGAAGAAGTGAAGCACCTCTTGGAAACGGCTTACAACAATGCAAAGAATATACTTACCACACATCACAAGGAGCTCCATGCTCTTGCTAATGCCTTATTGGAGCAAGAGACACTCACCGGAAAACAGATCAAGGTCTTGCTTGCTAACGTAAACTCTCAGCAGAACCAACAACCGCAACAGCAAGTTGTTGCAGAAACGTCACAGTCAAAACCAGTGCCGCCTCCATCACCACCCAATGCAGCTCAGTCGGCTGCAGCAGCAGCAGCAGCCGCCGCGGCCGCCGCTGCAACTGCTGCAGCCAAATCAAAAGGCATGGCTCCTGTGGGATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009888 GO:0009941 GO:0010073 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

557

Amino Acids

59.93

Weight (kDa)

6.97

Isoelectric Point (pI)

42.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_lid_3	PF17862	254 - 297	3.9e-12	AAA+ lid domain
Peptidase_M41	PF01434	313 - 491	1.8e-67	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26140
fragaria_vesca	FvH4_1g07720 FvH4_2g31730 FvH4_2g31730
malus_domestica	MD08G1063300.v1.1 MD15G1058100.v1.1 MD15G1058500.v1.1
prunus_persica	Prupe.1G410800_v2.0.a1
pyrus_communis	pycom08g05200 pycom15g05470 pycom15g05500
rosa_chinensis	RchiOBHm_Chr2g0093601 RchiOBHm_Chr6g0311091
rosa_laevigata	RLG00000010436 RLG00000016420
rosa_multiflora	Rmu_co8327861.1_g000001 Rmu_co8491229.1_g000001 Rmu_sc0002126.1_g000022 Rmu_sc0008967.1_g000002 Rmu_sc0012235.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147960 Rroxscaffold_7G00158030
rosa_rugosa	Rorug02G0037800 Rorug02G0037800 Rorug06G0385300 Rorug06G0385400
rosa_samantha	Rh2AG084300 Rh2BG084900 Rh2CG087200 Rh2DG082900 Rh6AG499400 Rh6BG509900 Rh6CG515700 Rh6DG502300
rosa_wichuraiana	Rw6G043500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	167
AccB1I	GGYRCC	1 cut(s)	1013
AccI	GTMKAC	1 cut(s)	452
AccII	CGCG	2 cut(s)	1126, 1616
AciI	CCGC	9 cut(s)	704, 1126, 1514, 1559, 1611, 1614, 1616, 1620, 1623
AclI	AACGTT	1 cut(s)	441
AclWI	GGATC	1 cut(s)	731
AcoI	YGGCCR	3 cut(s)	816, 982, 1617
AcuI	CTGAAG	3 cut(s)	270, 285, 386
AcyI	GRCGYC	1 cut(s)	13
AfaI	GTAC	1 cut(s)	541
AfeI	AGCGCT	1 cut(s)	306
AfiI	CCNNNNNNNGG	1 cut(s)	1054
AflII	CTTAAG	1 cut(s)	842
AgsI	TTSAA	2 cut(s)	272, 1340
AjiI	CACGTC	1 cut(s)	188
AjnI	CCWGG	1 cut(s)	793
AjuI	GAANNNNNNNTTGG	2 cut(s)	1343, 1375
AloI	GAACNNNNNNTCC	2 cut(s)	70, 102
Alw21I	GWGCWC	5 cut(s)	487, 592, 1167, 1319, 1416
Alw26I	GTCTC	5 cut(s)	4, 46, 1088, 1108, 1442
Alw44I	GTGCAC	1 cut(s)	483
AlwI	GGATC	1 cut(s)	731
Aor51HI	AGCGCT	1 cut(s)	306
AoxI	GGCC	4 cut(s)	3, 816, 982, 1617
ApaLI	GTGCAC	1 cut(s)	483
Asp700I	GAANNNNTTC	1 cut(s)	720
AspLEI	GCGC	4 cut(s)	168, 307, 863, 1126
AspS9I	GGNCC	2 cut(s)	4, 640
AsuHPI	GGTGA	3 cut(s)	1187, 1447, 1560
AvaII	GGWCC	1 cut(s)	640
BaeGI	GKGCMC	2 cut(s)	487, 1018
BaeI	ACNNNNGTAYC	2 cut(s)	12, 45
BalI	TGGCCA	2 cut(s)	818, 984
BanI	GGYRCC	1 cut(s)	1013
BanII	GRGCYC	2 cut(s)	1167, 1416
BbsI	GAAGAC	1 cut(s)	374
Bbv12I	GWGCWC	5 cut(s)	487, 592, 1167, 1319, 1416
BccI	CCATC	7 cut(s)	289, 455, 851, 907, 1004, 1026, 1573
BceAI	ACGGC	1 cut(s)	1383
BcgI	CGANNNNNNTGC	2 cut(s)	1569, 1603
BciT130I	CCWGG	1 cut(s)	795
BciVI	GTATCC	1 cut(s)	397
BclI	TGATCA	3 cut(s)	258, 774, 825
BcoDI	GTCTC	5 cut(s)	4, 46, 1088, 1108, 1442
BfaI	CTAG	8 cut(s)	75, 504, 560, 648, 660, 710, 783, 1326
BfmI	CTRYAG	2 cut(s)	1593, 1635
BfoI	RGCGCY	2 cut(s)	308, 864
BfrI	CTTAAG	1 cut(s)	842
BfuI	GTATCC	1 cut(s)	397
BglI	GCCNNNNNGGC	1 cut(s)	1616
Bme1390I	CCNGG	1 cut(s)	795
Bme18I	GGWCC	1 cut(s)	640
BmgBI	CACGTC	1 cut(s)	188
BmgT120I	GGNCC	2 cut(s)	4, 640
BmiI	GGNNCC	2 cut(s)	1015, 1659
BmrFI	CCNGG	1 cut(s)	795
BmrI	ACTGGG	1 cut(s)	1069
BmsI	GCATC	2 cut(s)	46, 1107
BmuI	ACTGGG	1 cut(s)	1069
BoxI	GACNNNNGTC	1 cut(s)	1100
BpiI	GAAGAC	1 cut(s)	374
BpmI	CTGGAG	2 cut(s)	135, 908
Bpu10I	CCTNAGC	1 cut(s)	699
BpuEI	CTTGAG	1 cut(s)	123
Bsa29I	ATCGAT	1 cut(s)	40
BsaHI	GRCGYC	1 cut(s)	13
BsaJI	CCNNGG	5 cut(s)	741, 794, 852, 1048, 1614
BsaWI	WCCGGW	3 cut(s)	88, 803, 1457
Bsc4I	CCNNNNNNNGG	1 cut(s)	1054
Bse1I	ACTGG	3 cut(s)	1022, 1075, 1553
Bse3DI	GCAATG	4 cut(s)	284, 371, 777, 1245
BseBI	CCWGG	1 cut(s)	795
BseCI	ATCGAT	1 cut(s)	40
BseDI	CCNNGG	5 cut(s)	741, 794, 852, 1048, 1614
BseGI	GGATG	5 cut(s)	355, 412, 862, 1018, 1096
BseLI	CCNNNNNNNGG	1 cut(s)	1054
BseMI	GCAATG	4 cut(s)	284, 371, 777, 1245
BseMII	CTCAG	4 cut(s)	38, 441, 1511, 1598
BseNI	ACTGG	3 cut(s)	1022, 1075, 1553
BseSI	GKGCMC	2 cut(s)	487, 1018
BseX3I	CGGCCG	1 cut(s)	1617
Bsh1236I	CGCG	2 cut(s)	1126, 1616
Bsh1285I	CGRYCG	1 cut(s)	1620
BshFI	GGCC	4 cut(s)	5, 818, 984, 1619
BshNI	GGYRCC	1 cut(s)	1013
BshVI	ATCGAT	1 cut(s)	40
BsiEI	CGRYCG	1 cut(s)	1620
BsiHKAI	GWGCWC	5 cut(s)	487, 592, 1167, 1319, 1416
BsiSI	CCGG	4 cut(s)	89, 804, 1213, 1458
BslFI	GGGAC	1 cut(s)	1161
BslI	CCNNNNNNNGG	1 cut(s)	1054
BsmAI	GTCTC	5 cut(s)	4, 46, 1088, 1108, 1442
BsmBI	CGTCTC	1 cut(s)	4
BsmFI	GGGAC	1 cut(s)	1161
BsmI	GAATGC	1 cut(s)	289
BsnI	GGCC	4 cut(s)	5, 818, 984, 1619
Bsp1286I	GDGCHC	6 cut(s)	487, 592, 1018, 1167, 1319, 1416
Bsp19I	CCATGG	1 cut(s)	852
BspACI	CCGC	9 cut(s)	704, 1126, 1514, 1559, 1611, 1614, 1616, 1620, 1623
BspANI	GGCC	4 cut(s)	5, 818, 984, 1619
BspCNI	CTCAG	4 cut(s)	37, 440, 1510, 1597
BspDI	ATCGAT	1 cut(s)	40
BspFNI	CGCG	2 cut(s)	1126, 1616
BspHI	TCATGA	1 cut(s)	973
BspLI	GGNNCC	2 cut(s)	1015, 1659
BspMAI	CTGCAG	2 cut(s)	1597, 1639
BspPI	GGATC	1 cut(s)	731
BspQI	GCTCTTC	2 cut(s)	1155, 1301
BspT107I	GGYRCC	1 cut(s)	1013
BspTI	CTTAAG	1 cut(s)	842
BsrDI	GCAATG	4 cut(s)	284, 371, 777, 1245
BsrI	ACTGG	3 cut(s)	1022, 1075, 1553
BssECI	CCNNGG	5 cut(s)	741, 794, 852, 1048, 1614
BssNI	GRCGYC	1 cut(s)	13
BssT1I	CCWWGG	2 cut(s)	741, 852
Bst2UI	CCWGG	1 cut(s)	795
Bst4CI	ACNGT	3 cut(s)	231, 544, 1545
Bst6I	CTCTTC	4 cut(s)	304, 630, 1155, 1301
BstACI	GRCGYC	1 cut(s)	13
BstAFI	CTTAAG	1 cut(s)	842
BstAPI	GCANNNNNTGC	2 cut(s)	110, 1634
BstC8I	GCNNGC	5 cut(s)	17, 178, 1122, 1218, 1482
BstDSI	CCRYGG	3 cut(s)	852, 1048, 1614
BstF5I	GGATG	5 cut(s)	355, 412, 862, 1018, 1096
BstFNI	CGCG	2 cut(s)	1126, 1616
BstH2I	RGCGCY	2 cut(s)	308, 864
BstHHI	GCGC	4 cut(s)	168, 307, 863, 1126
BstMAI	GTCTC	5 cut(s)	4, 46, 1088, 1108, 1442
BstMCI	CGRYCG	1 cut(s)	1620
BstNI	CCWGG	1 cut(s)	795
BstPAI	GACNNNNGTC	1 cut(s)	1100
BstSCI	CCNGG	1 cut(s)	793
BstSFI	CTRYAG	2 cut(s)	1593, 1635
BstSLI	GKGCMC	2 cut(s)	487, 1018
BstUI	CGCG	2 cut(s)	1126, 1616
BstV2I	GAAGAC	1 cut(s)	374
BstX2I	RGATCY	2 cut(s)	736, 1667
BstXI	CCANNNNNNTGG	1 cut(s)	1240
BstYI	RGATCY	2 cut(s)	736, 1667
BstZI	CGGCCG	1 cut(s)	1617
Bsu15I	ATCGAT	1 cut(s)	40
BsuI	GTATCC	1 cut(s)	397
BsuRI	GGCC	4 cut(s)	5, 818, 984, 1619
BsuTUI	ATCGAT	1 cut(s)	40
BtgI	CCRYGG	3 cut(s)	852, 1048, 1614
BtgZI	GCGATG	1 cut(s)	690
BtrI	CACGTC	1 cut(s)	188
BtsCI	GGATG	5 cut(s)	355, 412, 862, 1018, 1096
BtsI	GCAGTG	1 cut(s)	876
BtsIMutI	CAGTG	3 cut(s)	876, 1005, 1560
Cac8I	GCNNGC	5 cut(s)	17, 178, 1122, 1218, 1482
CciI	TCATGA	1 cut(s)	973
CciNI	GCGGCCGC	1 cut(s)	1617
CfoI	GCGC	4 cut(s)	168, 307, 863, 1126
Cfr13I	GGNCC	2 cut(s)	4, 640
Cfr42I	CCGCGG	1 cut(s)	1617
ClaI	ATCGAT	1 cut(s)	40
CseI	GACGC	1 cut(s)	21
Csp6I	GTAC	1 cut(s)	540
CviQI	GTAC	1 cut(s)	540
DraI	TTTAAA	1 cut(s)	523
EaeI	YGGCCR	3 cut(s)	816, 982, 1617
EagI	CGGCCG	1 cut(s)	1617
Eam1104I	CTCTTC	4 cut(s)	304, 630, 1155, 1301
EarI	CTCTTC	4 cut(s)	304, 630, 1155, 1301
EciI	GGCGGA	1 cut(s)	719
Ecl136II	GAGCTC	2 cut(s)	1165, 1414
EclXI	CGGCCG	1 cut(s)	1617
Eco130I	CCWWGG	2 cut(s)	741, 852
Eco24I	GRGCYC	2 cut(s)	1167, 1416
Eco32I	GATATC	1 cut(s)	576
Eco47I	GGWCC	1 cut(s)	640
Eco47III	AGCGCT	1 cut(s)	306
Eco52I	CGGCCG	1 cut(s)	1617
Eco53kI	GAGCTC	2 cut(s)	1165, 1414
Eco57I	CTGAAG	3 cut(s)	270, 285, 386
EcoICRI	GAGCTC	2 cut(s)	1165, 1414
EcoRII	CCWGG	1 cut(s)	793
EcoRV	GATATC	1 cut(s)	576
EcoT14I	CCWWGG	2 cut(s)	741, 852
EcoT38I	GRGCYC	2 cut(s)	1167, 1416
ErhI	CCWWGG	2 cut(s)	741, 852
Esp3I	CGTCTC	1 cut(s)	4
FalI	AAGNNNNNCTT	4 cut(s)	1260, 1292, 1343, 1375
FaqI	GGGAC	1 cut(s)	1161
FauNDI	CATATG	1 cut(s)	495
FbaI	TGATCA	3 cut(s)	258, 774, 825
FblI	GTMKAC	1 cut(s)	452
FokI	GGATG	5 cut(s)	362, 419, 869, 1005, 1103
FriOI	GRGCYC	2 cut(s)	1167, 1416
FspBI	CTAG	8 cut(s)	75, 504, 560, 648, 660, 710, 783, 1326
FspI	TGCGCA	1 cut(s)	167
GlaI	GCGC	4 cut(s)	167, 306, 862, 1125
GsuI	CTGGAG	2 cut(s)	135, 908
HaeII	RGCGCY	2 cut(s)	308, 864
HaeIII	GGCC	4 cut(s)	5, 818, 984, 1619
HapII	CCGG	4 cut(s)	89, 804, 1213, 1458
HgaI	GACGC	1 cut(s)	21
HhaI	GCGC	4 cut(s)	168, 307, 863, 1126
Hin1I	GRCGYC	1 cut(s)	13
Hin6I	GCGC	4 cut(s)	166, 305, 861, 1124
HinP1I	GCGC	4 cut(s)	166, 305, 861, 1124
HincII	GTYRAC	2 cut(s)	94, 278
HindII	GTYRAC	2 cut(s)	94, 278
HinfI	GANTC	2 cut(s)	656, 950
HpaII	CCGG	4 cut(s)	89, 804, 1213, 1458
HphI	GGTGA	3 cut(s)	1187, 1447, 1560
Hpy166II	GTNNAC	8 cut(s)	94, 278, 453, 485, 724, 1003, 1027, 1492
Hpy188I	TCNGA	5 cut(s)	46, 263, 313, 946, 1204
Hpy188III	TCNNGA	6 cut(s)	75, 140, 734, 887, 954, 974
Hpy8I	GTNNAC	8 cut(s)	94, 278, 453, 485, 724, 1003, 1027, 1492
HpyAV	CCTTC	3 cut(s)	336, 503, 745
HpyCH4III	ACNGT	3 cut(s)	231, 544, 1545
HpyCH4IV	ACGT	5 cut(s)	187, 441, 831, 1488, 1538
HpySE526I	ACGT	5 cut(s)	187, 441, 831, 1488, 1538
Hsp92I	GRCGYC	1 cut(s)	13
HspAI	GCGC	4 cut(s)	166, 305, 861, 1124
Ksp22I	TGATCA	3 cut(s)	258, 774, 825
KspI	CCGCGG	1 cut(s)	1617
LguI	GCTCTTC	2 cut(s)	1155, 1301
LmnI	GCTCC	6 cut(s)	587, 706, 1411, 1419, 1441, 1663
LweI	GCATC	2 cut(s)	46, 1107
MaeI	CTAG	8 cut(s)	75, 504, 560, 648, 660, 710, 783, 1326
MaeII	ACGT	5 cut(s)	187, 441, 831, 1488, 1538
MaeIII	GTNAC	6 cut(s)	360, 951, 1186, 1243, 1279, 1539
MfeI	CAATTG	1 cut(s)	552
MflI	RGATCY	2 cut(s)	736, 1667
MhlI	GDGCHC	6 cut(s)	487, 592, 1018, 1167, 1319, 1416
MlsI	TGGCCA	2 cut(s)	818, 984
MluCI	AATT	5 cut(s)	126, 169, 552, 717, 1288
MluNI	TGGCCA	2 cut(s)	818, 984
MlyI	GAGTC	1 cut(s)	959
MmeI	TCCRAC	5 cut(s)	318, 319, 414, 565, 667
Mox20I	TGGCCA	2 cut(s)	818, 984
MroXI	GAANNNNTTC	1 cut(s)	720
MscI	TGGCCA	2 cut(s)	818, 984
MseI	TTAA	4 cut(s)	132, 522, 629, 843
MslI	CAYNNNNRTG	3 cut(s)	978, 1008, 1290
Msp20I	TGGCCA	2 cut(s)	818, 984
MspA1I	CMGCKG	5 cut(s)	58, 532, 935, 1616, 1625
MspCI	CTTAAG	1 cut(s)	842
MspI	CCGG	4 cut(s)	89, 804, 1213, 1458
MspR9I	CCNGG	1 cut(s)	795
MunI	CAATTG	1 cut(s)	552
Mva1269I	GAATGC	1 cut(s)	289
MvaI	CCWGG	1 cut(s)	795
MvnI	CGCG	2 cut(s)	1126, 1616
NcoI	CCATGG	1 cut(s)	852
NdeI	CATATG	1 cut(s)	495
NlaIV	GGNNCC	2 cut(s)	1015, 1659
NmuCI	GTSAC	3 cut(s)	951, 1279, 1539
NotI	GCGGCCGC	1 cut(s)	1617
NsbI	TGCGCA	1 cut(s)	167
PagI	TCATGA	1 cut(s)	973
PciSI	GCTCTTC	2 cut(s)	1155, 1301
PcsI	WCGNNNNNNNCGW	1 cut(s)	184
PctI	GAATGC	1 cut(s)	289
PdmI	GAANNNNTTC	1 cut(s)	720
PfeI	GAWTC	1 cut(s)	656
PleI	GAGTC	1 cut(s)	958
PpsI	GAGTC	1 cut(s)	958
PshAI	GACNNNNGTC	1 cut(s)	1100
Psp124BI	GAGCTC	2 cut(s)	1167, 1416
Psp1406I	AACGTT	1 cut(s)	441
Psp6I	CCWGG	1 cut(s)	793
PspGI	CCWGG	1 cut(s)	793
PspN4I	GGNNCC	2 cut(s)	1015, 1659
PspPI	GGNCC	2 cut(s)	4, 640
PstI	CTGCAG	2 cut(s)	1597, 1639
PsuI	RGATCY	2 cut(s)	736, 1667
PvuII	CAGCTG	3 cut(s)	58, 532, 935
RsaI	GTAC	1 cut(s)	541
RsaNI	GTAC	1 cut(s)	540
RseI	CAYNNNNRTG	3 cut(s)	978, 1008, 1290
SacI	GAGCTC	2 cut(s)	1167, 1416
SacII	CCGCGG	1 cut(s)	1617
SapI	GCTCTTC	2 cut(s)	1155, 1301
SaqAI	TTAA	4 cut(s)	132, 522, 629, 843
Sau96I	GGNCC	2 cut(s)	4, 640
SchI	GAGTC	1 cut(s)	959
ScrFI	CCNGG	1 cut(s)	795
SduI	GDGCHC	6 cut(s)	487, 592, 1018, 1167, 1319, 1416
SfaNI	GCATC	2 cut(s)	46, 1107
SfcI	CTRYAG	2 cut(s)	1593, 1635
Sfr303I	CCGCGG	1 cut(s)	1617
SgrBI	CCGCGG	1 cut(s)	1617
SinI	GGWCC	1 cut(s)	640
SmiMI	CAYNNNNRTG	3 cut(s)	978, 1008, 1290
SmlI	CTYRAG	2 cut(s)	138, 842
SmoI	CTYRAG	2 cut(s)	138, 842
Sse9I	AATT	5 cut(s)	126, 169, 552, 717, 1288
SsiI	CCGC	9 cut(s)	704, 1126, 1514, 1559, 1611, 1614, 1616, 1620, 1623
SspMI	CTAG	8 cut(s)	75, 504, 560, 648, 660, 710, 783, 1326
SstI	GAGCTC	2 cut(s)	1167, 1416
StyD4I	CCNGG	1 cut(s)	793
StyI	CCWWGG	2 cut(s)	741, 852
TaaI	ACNGT	3 cut(s)	231, 544, 1545
TaiI	ACGT	5 cut(s)	190, 444, 834, 1491, 1541
TaqI	TCGA	2 cut(s)	40, 733
TasI	AATT	5 cut(s)	126, 169, 552, 717, 1288
TauI	GCSGC	7 cut(s)	1129, 1561, 1613, 1616, 1619, 1622, 1625
TfiI	GAWTC	1 cut(s)	656
Tru1I	TTAA	4 cut(s)	132, 522, 629, 843
Tru9I	TTAA	4 cut(s)	132, 522, 629, 843
TscAI	CASTG	3 cut(s)	876, 1012, 1560
TseFI	GTSAC	3 cut(s)	951, 1279, 1539
Tsp45I	GTSAC	3 cut(s)	951, 1279, 1539
TspDTI	ATGAA	7 cut(s)	213, 222, 423, 482, 648, 764, 962
TspGWI	ACGGA	1 cut(s)	1123
TspRI	CASTG	3 cut(s)	876, 1012, 1560
Vha464I	CTTAAG	1 cut(s)	842
VneI	GTGCAC	1 cut(s)	483
VpaK11BI	GGWCC	1 cut(s)	640
XbaI	TCTAGA	1 cut(s)	74
XmiI	GTMKAC	1 cut(s)	452
XmnI	GAANNNNTTC	1 cut(s)	720
XspI	CTAG	8 cut(s)	75, 504, 560, 648, 660, 710, 783, 1326

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.