Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003616

Physical Location & Seq

Genomic Coordinates Forward (+)

35894631 .. 35899993

Gene Structure 5363 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G410800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2154 bp

ATGGCTTTGAGGCGCCTGATCACTCAGGTTTCAAGGCATCGATCAGAGTTGGGACAACTGACGAAAGTGATTACCAGAACTTATCATCCAGTCAACAGGTTAGGAGGAGGTGCTGGAGGGAATAAGTTTTTAAGTACTCAAGAGAGGTTTAAGTCGAGCTATGTTGGTAGTTTAGCTCGCAGAGTACGCGACACAGATGAAGCTAGTGAAGTTGCCCATCTAAAAGAACTTTACCATCGGAGTGATTATGAATCAGTGATAAGATTTTTTGAAAGTCAGCCATCATTACATTCTAACCCTTCAGCACTTTCTGAATACGTCAAAGCATTAGTCAGAGTTGGCAGGCTGGATGAGAGTGAGTTACTCAAGACATTACAGAGAGGTGTCGCTAACTCTGCACGGGAGGAAGAAAACATAGGTGGCTTCTCAGTTCTCAGGAGTGTCGGAAAATCATCGAAGGATGGTATTCTCGGAACTGCAAGTGCTCCTATTCATATGGTGGCCACAGAAGGAGGTCAGTTTAAAGAGCAGCTGTGGCGTACCGTTCGCACTATTGCACTAGCCTTTCTTTTGATATCTGGTATAGGAGCACTCATTGAGGATAGAGGAATAAGCAAAGGACTTGGACTAAATGAGGAGGTTCAACCTAGCATGGAATCTAACACAAAATTTAGTGACGTAAAGGGTGTTGATGAGGCTAAATCGGAGCTAGAGGAAATTGTTCACTATCTTCGAGATCCTAAGCGTTTCACTCGTCTAGGAGGCAAGCTCCCAAAAGGTGTTTTGCTTGTCGGCCCACCTGGTACTGGAAAAACAATGTTAGCAAGAGCCATTGCTGGAGAAGCAGGGGTACCATTCTTCTCATGCAGCGGCAGTGAGTTTGAAGAGATGTTTGTTGGTGTTGGAGCTCGAAGGGTGAGGGATCTTTTTGCAGCTGCAAAGAAGCGCTCCCCGTGTATAATATTTATTGATGAGATAGATGCAATAGGAGGAAGTCGAAATCCAAAGGATCAGCAGTACATGAAGATGACTCTCAATCAGTTGCTTGTTGAACTTGATGGTTTTAAGCAAAATGAAGGGATTATTGTTATTGCAGCTACTAATTTCCCAGAGTCCCTGGACAAGGCATTGGTGAGACCTGGACGGTTTGATCGGCACATTGTTGTTCCTAATCCTGATGTTGAAGGGCGGAGGCAGATTATGGAAGCGCACATGTCTAAGGTTCTGAAGGCTGAAGATGTTGATTTGAGTATCATTGCTAGAGGAACTCCGGGGTTCTCTGGCGCAGATCTTGCGAACTTGATCAACATAGCTGCTTTGAAGGCTGCCATGGACGATGCTAAAGCAGTGAATATGGCTGATCTTGAGTATGCAAAAGACAAGATTATGATGGGAAGTGAACGCAAGTCGGCTGTTATATCTGATGAGTCAAGAAAGCTAACAGCTTTTCATGAGGGTGGCCATGCACTTGTGGCCATCCACACTGATGGTGCTCATCCAGTTCACAAGGCAACAATAGTTCCTCGGGGTATGTCACTTGGCATGGTTGCCCAGTTGCCCGACAAGGATGAGACAAGTGTCTCCCGGAAACAGATGCTTGCACGGCTCGATGTTTGTATGGGAGGGCGGGTTGCAGAAGAGCTCATCTTTGGCGAAAGTGAAGTCACTTCTGGTGCATCTGATGATCTCCGGCAAGCAACTTCGCTTGCTAGAGCAATGGTTACAAAGTACGGTATGAGCAAAGAAGTTGGGCTCGTCAGCCACAATTATGATGACAACGGGAAGAGCATGAGCACAGAAACTAGGCTGCTTATCGAAGAAGAAGTGAAGAACTTCTTGGAAAGGGCATACAACAATGCAAAAACCATCCTTACGTCACATAGCAAGGAGCTCCATGCCCTTGCTAATGCTTTACTAGAGCAAGAGACGCTGACTGGAACTCAGATCAAGGCCTTGCTTGCGCAAGTAAACTCTCAGCAGCAGCAACAGCAACAACCACACCAGCAAGTAGTTGCAGCAAAGAGTAGCTCACAGTCAAAAGTGCCACCCTCAACACCCAACGCAGCTGCATCTGCTGCCGCCGCAGCCGCCGCAGCCGCAGCGGCTGCAACTGCTGCAGCCAAGTCAACAGGCATTGCTCCTGTGGGATCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009888 GO:0009941 GO:0010073 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

718

Amino Acids

77.36

Weight (kDa)

8.61

Isoelectric Point (pI)

44.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26140
fragaria_vesca	FvH4_1g07720 FvH4_2g31730 FvH4_2g31730
malus_domestica	MD08G1063300.v1.1 MD15G1058100.v1.1 MD15G1058500.v1.1
prunus_persica	Prupe.1G410800_v2.0.a1
pyrus_communis	pycom08g05200 pycom15g05470 pycom15g05500
rosa_chinensis	RchiOBHm_Chr2g0093601 RchiOBHm_Chr6g0311091
rosa_laevigata	RLG00000010436 RLG00000016420
rosa_multiflora	Rmu_co8327861.1_g000001 Rmu_co8491229.1_g000001 Rmu_sc0002126.1_g000022 Rmu_sc0008967.1_g000002 Rmu_sc0012235.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147960 Rroxscaffold_7G00158030
rosa_rugosa	Rorug02G0037800 Rorug02G0037800 Rorug06G0385300 Rorug06G0385400
rosa_samantha	Rh2AG084300 Rh2BG084900 Rh2CG087200 Rh2DG082900 Rh6AG499400 Rh6BG509900 Rh6CG515700 Rh6DG502300
rosa_wichuraiana	Rw6G043500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1962
Acc65I	GGTACC	1 cut(s)	850
AccB1I	GGYRCC	2 cut(s)	12, 850
AccII	CGCG	1 cut(s)	189
AciI	CCGC	9 cut(s)	870, 1189, 1627, 2079, 2082, 2088, 2091, 2097, 2102
AclWI	GGATC	3 cut(s)	731, 930, 1017
AcoI	YGGCCR	3 cut(s)	501, 1459, 1473
AcsI	RAATTY	1 cut(s)	668
AcuI	CTGAAG	3 cut(s)	285, 1247, 1254
AcyI	GRCGYC	1 cut(s)	13
AfaI	GTAC	7 cut(s)	136, 186, 541, 805, 852, 1019, 1730
AfeI	AGCGCT	1 cut(s)	947
AfiI	CCNNNNNNNGG	2 cut(s)	806, 1123
AflIII	ACRYGT	1 cut(s)	1212
AgsI	TTSAA	7 cut(s)	33, 272, 644, 884, 1052, 1184, 1321
AjnI	CCWGG	3 cut(s)	799, 1116, 1138
AjuI	GAANNNNNNNTTGG	2 cut(s)	1820, 1852
AloI	GAACNNNNNNTCC	2 cut(s)	70, 102
Alw21I	GWGCWC	7 cut(s)	487, 592, 910, 1495, 1644, 1796, 1893
Alw26I	GTCTC	4 cut(s)	1129, 1565, 1585, 1919
AlwI	GGATC	3 cut(s)	731, 930, 1017
AlwNI	CAGNNNCTG	1 cut(s)	2105
Ama87I	CYCGRG	1 cut(s)	1524
Aor51HI	AGCGCT	1 cut(s)	947
AoxI	GGCC	5 cut(s)	501, 793, 1459, 1473, 1950
ApoI	RAATTY	1 cut(s)	668
ArsI	GACNNNNNNTTYG	4 cut(s)	315, 347, 1647, 1679
Asp700I	GAANNNNTTC	2 cut(s)	720, 1832
Asp718I	GGTACC	1 cut(s)	850
AspLEI	GCGC	5 cut(s)	15, 948, 1210, 1286, 1963
AspS9I	GGNCC	1 cut(s)	794
AsuC2I	CCSGG	2 cut(s)	1272, 1585
AsuHPI	GGTGA	2 cut(s)	928, 1144
AvaI	CYCGRG	1 cut(s)	1524
BalI	TGGCCA	3 cut(s)	503, 1461, 1475
BanI	GGYRCC	2 cut(s)	12, 850
BanII	GRGCYC	4 cut(s)	910, 1644, 1755, 1893
BarI	GAAGNNNNNNTAC	2 cut(s)	834, 866
Bbv12I	GWGCWC	7 cut(s)	487, 592, 910, 1495, 1644, 1796, 1893
BccI	CCATC	9 cut(s)	225, 243, 289, 455, 1052, 1384, 1481, 1484, 1874
BceAI	ACGGC	1 cut(s)	1619
BciT130I	CCWGG	3 cut(s)	801, 1118, 1140
BclI	TGATCA	2 cut(s)	18, 1302
BcnI	CCSGG	2 cut(s)	1272, 1585
BcoDI	GTCTC	4 cut(s)	1129, 1565, 1585, 1919
BfaI	CTAG	9 cut(s)	204, 560, 648, 710, 758, 1260, 1710, 1803, 1916
BfmI	CTRYAG	1 cut(s)	2115
BfoI	RGCGCY	2 cut(s)	16, 949
BglI	GCCNNNNNGGC	1 cut(s)	2102
BglII	AGATCT	1 cut(s)	1288
BmcAI	AGTACT	1 cut(s)	136
Bme1390I	CCNGG	5 cut(s)	801, 1118, 1140, 1272, 1585
BmeT110I	CYCGRG	1 cut(s)	1524
BmgT120I	GGNCC	1 cut(s)	794
BmiI	GGNNCC	2 cut(s)	14, 852
BmrFI	CCNGG	5 cut(s)	801, 1118, 1140, 1272, 1585
BmrI	ACTGGG	1 cut(s)	1546
BmsI	GCATC	6 cut(s)	46, 970, 1327, 1584, 1685, 2078
BmuI	ACTGGG	1 cut(s)	1546
BoxI	GACNNNNGTC	1 cut(s)	1577
BplI	GAGNNNNNCTC	2 cut(s)	753, 785
BpmI	CTGGAG	2 cut(s)	135, 858
Bpu10I	CCTNAGC	1 cut(s)	741
BpuEI	CTTGAG	3 cut(s)	123, 350, 1385
BpuMI	CCSGG	2 cut(s)	1272, 1585
Bsa29I	ATCGAT	1 cut(s)	40
BsaHI	GRCGYC	1 cut(s)	13
BsaI	GGTCTC	1 cut(s)	1129
BsaJI	CCNNGG	4 cut(s)	1116, 1271, 1329, 1523
BsaXI	ACNNNNNCTCC	2 cut(s)	1614, 1644
Bsc4I	CCNNNNNNNGG	2 cut(s)	806, 1123
Bse1I	ACTGG	5 cut(s)	89, 811, 1499, 1552, 1939
Bse3DI	GCAATG	4 cut(s)	831, 1254, 1722, 2133
BseBI	CCWGG	3 cut(s)	801, 1118, 1140
BseCI	ATCGAT	1 cut(s)	40
BseDI	CCNNGG	4 cut(s)	1116, 1271, 1329, 1523
BseGI	GGATG	7 cut(s)	85, 355, 466, 1476, 1495, 1573, 1866
BseLI	CCNNNNNNNGG	2 cut(s)	806, 1123
BseMI	GCAATG	4 cut(s)	831, 1254, 1722, 2133
BseMII	CTCAG	5 cut(s)	38, 441, 448, 1955, 1988
BseNI	ACTGG	5 cut(s)	89, 811, 1499, 1552, 1939
BseRI	GAGGAG	2 cut(s)	120, 650
BsgI	GTGCAG	1 cut(s)	381
Bsh1236I	CGCG	1 cut(s)	189
BshFI	GGCC	5 cut(s)	503, 795, 1461, 1475, 1952
BshNI	GGYRCC	2 cut(s)	12, 850
BshVI	ATCGAT	1 cut(s)	40
BsiHKAI	GWGCWC	7 cut(s)	487, 592, 910, 1495, 1644, 1796, 1893
BsiHKCI	CYCGRG	1 cut(s)	1524
BsiSI	CCGG	3 cut(s)	1271, 1585, 1690
BslFI	GGGAC	2 cut(s)	66, 1099
BslI	CCNNNNNNNGG	2 cut(s)	806, 1123
BsmAI	GTCTC	4 cut(s)	1129, 1565, 1585, 1919
BsmBI	CGTCTC	1 cut(s)	1919
BsmFI	GGGAC	2 cut(s)	66, 1099
BsnI	GGCC	5 cut(s)	503, 795, 1461, 1475, 1952
Bso31I	GGTCTC	1 cut(s)	1129
BsoBI	CYCGRG	1 cut(s)	1524
Bsp1286I	GDGCHC	8 cut(s)	487, 592, 910, 1495, 1644, 1755, 1796, 1893
Bsp19I	CCATGG	1 cut(s)	1329
BspACI	CCGC	9 cut(s)	870, 1189, 1627, 2079, 2082, 2088, 2091, 2097, 2102
BspANI	GGCC	5 cut(s)	503, 795, 1461, 1475, 1952
BspCNI	CTCAG	5 cut(s)	37, 440, 447, 1954, 1987
BspDI	ATCGAT	1 cut(s)	40
BspFNI	CGCG	1 cut(s)	189
BspHI	TCATGA	1 cut(s)	1450
BspLI	GGNNCC	2 cut(s)	14, 852
BspMAI	CTGCAG	1 cut(s)	2119
BspPI	GGATC	3 cut(s)	731, 930, 1017
BspQI	GCTCTTC	2 cut(s)	1632, 1778
BspT107I	GGYRCC	2 cut(s)	12, 850
BspTNI	GGTCTC	1 cut(s)	1129
BsrDI	GCAATG	4 cut(s)	831, 1254, 1722, 2133
BsrI	ACTGG	5 cut(s)	89, 811, 1499, 1552, 1939
BssECI	CCNNGG	4 cut(s)	1116, 1271, 1329, 1523
BssNI	GRCGYC	1 cut(s)	13
BssT1I	CCWWGG	1 cut(s)	1329
Bst2UI	CCWGG	3 cut(s)	801, 1118, 1140
Bst4CI	ACNGT	4 cut(s)	544, 1146, 1733, 2034
Bst6I	CTCTTC	3 cut(s)	879, 1632, 1778
BstACI	GRCGYC	1 cut(s)	13
BstAPI	GCANNNNNTGC	4 cut(s)	1292, 2075, 2105, 2114
BstC8I	GCNNGC	7 cut(s)	178, 344, 767, 1599, 1695, 1707, 1959
BstDEI	CTNAG	8 cut(s)	24, 427, 434, 741, 1218, 1941, 1974, 2151
BstDSI	CCRYGG	1 cut(s)	1329
BstENI	CCTNNNNNAGG	1 cut(s)	1121
BstF5I	GGATG	7 cut(s)	85, 355, 466, 1476, 1495, 1573, 1866
BstFNI	CGCG	1 cut(s)	189
BstH2I	RGCGCY	2 cut(s)	16, 949
BstHHI	GCGC	5 cut(s)	15, 948, 1210, 1286, 1963
BstMAI	GTCTC	4 cut(s)	1129, 1565, 1585, 1919
BstNI	CCWGG	3 cut(s)	801, 1118, 1140
BstNSI	RCATGY	1 cut(s)	1216
BstPAI	GACNNNNGTC	1 cut(s)	1577
BstSCI	CCNGG	5 cut(s)	799, 1116, 1138, 1270, 1583
BstSFI	CTRYAG	1 cut(s)	2115
BstUI	CGCG	1 cut(s)	189
BstX2I	RGATCY	4 cut(s)	736, 922, 1288, 2147
BstXI	CCANNNNNNTGG	1 cut(s)	1487
BstYI	RGATCY	4 cut(s)	736, 922, 1288, 2147
Bsu15I	ATCGAT	1 cut(s)	40
BsuRI	GGCC	5 cut(s)	503, 795, 1461, 1475, 1952
BsuTUI	ATCGAT	1 cut(s)	40
BtgI	CCRYGG	1 cut(s)	1329
BtsCI	GGATG	7 cut(s)	85, 355, 466, 1476, 1495, 1573, 1866
BtsI	GCAGTG	2 cut(s)	880, 1353
BtsIMutI	CAGTG	4 cut(s)	261, 880, 1353, 1482
Cac8I	GCNNGC	7 cut(s)	178, 344, 767, 1599, 1695, 1707, 1959
CaiI	CAGNNNCTG	1 cut(s)	2105
CciI	TCATGA	1 cut(s)	1450
CfoI	GCGC	5 cut(s)	15, 948, 1210, 1286, 1963
Cfr13I	GGNCC	1 cut(s)	794
ClaI	ATCGAT	1 cut(s)	40
CseI	GACGC	1 cut(s)	1936
CsiI	ACCWGGT	1 cut(s)	799
Csp6I	GTAC	7 cut(s)	135, 185, 540, 804, 851, 1018, 1729
CviQI	GTAC	7 cut(s)	135, 185, 540, 804, 851, 1018, 1729
DdeI	CTNAG	8 cut(s)	24, 427, 434, 741, 1218, 1941, 1974, 2151
DinI	GGCGCC	1 cut(s)	14
DraI	TTTAAA	1 cut(s)	523
EaeI	YGGCCR	3 cut(s)	501, 1459, 1473
Eam1104I	CTCTTC	3 cut(s)	879, 1632, 1778
EarI	CTCTTC	3 cut(s)	879, 1632, 1778
EciI	GGCGGA	1 cut(s)	1204
Ecl136II	GAGCTC	3 cut(s)	908, 1642, 1891
Eco130I	CCWWGG	1 cut(s)	1329
Eco147I	AGGCCT	1 cut(s)	1952
Eco24I	GRGCYC	4 cut(s)	910, 1644, 1755, 1893
Eco31I	GGTCTC	1 cut(s)	1129
Eco32I	GATATC	1 cut(s)	576
Eco47III	AGCGCT	1 cut(s)	947
Eco53kI	GAGCTC	3 cut(s)	908, 1642, 1891
Eco57I	CTGAAG	3 cut(s)	285, 1247, 1254
Eco88I	CYCGRG	1 cut(s)	1524
EcoICRI	GAGCTC	3 cut(s)	908, 1642, 1891
EcoNI	CCTNNNNNAGG	1 cut(s)	1121
EcoRII	CCWGG	3 cut(s)	799, 1116, 1138
EcoRV	GATATC	1 cut(s)	576
EcoT14I	CCWWGG	1 cut(s)	1329
EcoT38I	GRGCYC	4 cut(s)	910, 1644, 1755, 1893
EgeI	GGCGCC	1 cut(s)	14
EheI	GGCGCC	1 cut(s)	14
ErhI	CCWWGG	1 cut(s)	1329
Esp3I	CGTCTC	1 cut(s)	1919
FalI	AAGNNNNNCTT	2 cut(s)	1820, 1852
FaqI	GGGAC	2 cut(s)	66, 1099
FauI	CCCGC	1 cut(s)	1620
FauNDI	CATATG	1 cut(s)	495
FbaI	TGATCA	2 cut(s)	18, 1302
FokI	GGATG	7 cut(s)	72, 362, 473, 1463, 1482, 1580, 1853
FriOI	GRGCYC	4 cut(s)	910, 1644, 1755, 1893
FspBI	CTAG	9 cut(s)	204, 560, 648, 710, 758, 1260, 1710, 1803, 1916
FspI	TGCGCA	1 cut(s)	1962
GlaI	GCGC	5 cut(s)	14, 947, 1209, 1285, 1962
GsuI	CTGGAG	2 cut(s)	135, 858
HaeII	RGCGCY	2 cut(s)	16, 949
HaeIII	GGCC	5 cut(s)	503, 795, 1461, 1475, 1952
HapII	CCGG	3 cut(s)	1271, 1585, 1690
HgaI	GACGC	1 cut(s)	1936
HhaI	GCGC	5 cut(s)	15, 948, 1210, 1286, 1963
Hin1I	GRCGYC	1 cut(s)	13
Hin6I	GCGC	5 cut(s)	13, 946, 1208, 1284, 1961
HinP1I	GCGC	5 cut(s)	13, 946, 1208, 1284, 1961
HincII	GTYRAC	2 cut(s)	94, 2127
HindII	GTYRAC	2 cut(s)	94, 2127
HinfI	GANTC	5 cut(s)	251, 656, 1030, 1112, 1427
HpaII	CCGG	3 cut(s)	1271, 1585, 1690
HphI	GGTGA	2 cut(s)	928, 1144
Hpy166II	GTNNAC	6 cut(s)	94, 724, 1400, 1504, 1969, 2127
Hpy188III	TCNNGA	8 cut(s)	140, 367, 436, 734, 1175, 1364, 1431, 1451
Hpy8I	GTNNAC	6 cut(s)	94, 724, 1400, 1504, 1969, 2127
HpyAV	CCTTC	8 cut(s)	309, 451, 503, 906, 1070, 1178, 1222, 1315
HpyCH4III	ACNGT	4 cut(s)	544, 1146, 1733, 2034
HpyCH4IV	ACGT	3 cut(s)	318, 678, 1874
HpyF3I	CTNAG	8 cut(s)	24, 427, 434, 741, 1218, 1941, 1974, 2151
HpySE526I	ACGT	3 cut(s)	318, 678, 1874
Hsp92I	GRCGYC	1 cut(s)	13
HspAI	GCGC	5 cut(s)	13, 946, 1208, 1284, 1961
KasI	GGCGCC	1 cut(s)	12
KpnI	GGTACC	1 cut(s)	854
Ksp22I	TGATCA	2 cut(s)	18, 1302
LguI	GCTCTTC	2 cut(s)	1632, 1778
LmnI	GCTCC	9 cut(s)	490, 587, 706, 774, 905, 953, 1888, 1896, 2143
LweI	GCATC	6 cut(s)	46, 970, 1327, 1584, 1685, 2078
MabI	ACCWGGT	1 cut(s)	799
MaeI	CTAG	9 cut(s)	204, 560, 648, 710, 758, 1260, 1710, 1803, 1916
MaeII	ACGT	3 cut(s)	318, 678, 1874
MaeIII	GTNAC	6 cut(s)	360, 674, 1533, 1663, 1720, 1875
MflI	RGATCY	4 cut(s)	736, 922, 1288, 2147
MhlI	GDGCHC	8 cut(s)	487, 592, 910, 1495, 1644, 1755, 1796, 1893
MlsI	TGGCCA	3 cut(s)	503, 1461, 1475
MluCI	AATT	4 cut(s)	668, 717, 1102, 1765
MluNI	TGGCCA	3 cut(s)	503, 1461, 1475
Mly113I	GGCGCC	1 cut(s)	13
MlyI	GAGTC	3 cut(s)	1024, 1121, 1436
MmeI	TCCRAC	2 cut(s)	424, 883
Mox20I	TGGCCA	3 cut(s)	503, 1461, 1475
MroXI	GAANNNNTTC	2 cut(s)	720, 1832
MscI	TGGCCA	3 cut(s)	503, 1461, 1475
MseI	TTAA	4 cut(s)	131, 150, 522, 1065
MslI	CAYNNNNRTG	5 cut(s)	240, 1025, 1455, 1485, 1767
Msp20I	TGGCCA	3 cut(s)	503, 1461, 1475
MspA1I	CMGCKG	5 cut(s)	532, 870, 935, 2066, 2102
MspI	CCGG	3 cut(s)	1271, 1585, 1690
MspR9I	CCNGG	5 cut(s)	801, 1118, 1140, 1272, 1585
MvaI	CCWGG	3 cut(s)	801, 1118, 1140
MvnI	CGCG	1 cut(s)	189
NarI	GGCGCC	1 cut(s)	13
NciI	CCSGG	2 cut(s)	1272, 1585
NcoI	CCATGG	1 cut(s)	1329
NdeI	CATATG	1 cut(s)	495
NlaIV	GGNNCC	2 cut(s)	14, 852
NmuCI	GTSAC	4 cut(s)	674, 1533, 1663, 1875
NsbI	TGCGCA	1 cut(s)	1962
NspI	RCATGY	1 cut(s)	1216
PagI	TCATGA	1 cut(s)	1450
PceI	AGGCCT	1 cut(s)	1952
PciI	ACATGT	1 cut(s)	1212
PciSI	GCTCTTC	2 cut(s)	1632, 1778
PdmI	GAANNNNTTC	2 cut(s)	720, 1832
PfeI	GAWTC	2 cut(s)	251, 656
PfoI	TCCNGGA	1 cut(s)	1583
PleI	GAGTC	3 cut(s)	1024, 1120, 1435
PluTI	GGCGCC	1 cut(s)	16
PpsI	GAGTC	3 cut(s)	1024, 1120, 1435
PscI	ACATGT	1 cut(s)	1212
PshAI	GACNNNNGTC	1 cut(s)	1577
Psp124BI	GAGCTC	3 cut(s)	910, 1644, 1893
Psp6I	CCWGG	3 cut(s)	799, 1116, 1138
PspGI	CCWGG	3 cut(s)	799, 1116, 1138
PspN4I	GGNNCC	2 cut(s)	14, 852
PspPI	GGNCC	1 cut(s)	794
PstI	CTGCAG	1 cut(s)	2119
PstNI	CAGNNNCTG	1 cut(s)	2105
PsuI	RGATCY	4 cut(s)	736, 922, 1288, 2147
PvuII	CAGCTG	3 cut(s)	532, 935, 2066
RsaI	GTAC	7 cut(s)	136, 186, 541, 805, 852, 1019, 1730
RsaNI	GTAC	7 cut(s)	135, 185, 540, 804, 851, 1018, 1729
RseI	CAYNNNNRTG	5 cut(s)	240, 1025, 1455, 1485, 1767
SacI	GAGCTC	3 cut(s)	910, 1644, 1893
SapI	GCTCTTC	2 cut(s)	1632, 1778
SaqAI	TTAA	4 cut(s)	131, 150, 522, 1065
Sau96I	GGNCC	1 cut(s)	794
ScaI	AGTACT	1 cut(s)	136
SchI	GAGTC	3 cut(s)	1024, 1121, 1436
ScrFI	CCNGG	5 cut(s)	801, 1118, 1140, 1272, 1585
SduI	GDGCHC	8 cut(s)	487, 592, 910, 1495, 1644, 1755, 1796, 1893
SexAI	ACCWGGT	1 cut(s)	799
SfaNI	GCATC	6 cut(s)	46, 970, 1327, 1584, 1685, 2078
SfcI	CTRYAG	1 cut(s)	2115
SfoI	GGCGCC	1 cut(s)	14
SmiMI	CAYNNNNRTG	5 cut(s)	240, 1025, 1455, 1485, 1767
SmlI	CTYRAG	3 cut(s)	138, 365, 1364
SmoI	CTYRAG	3 cut(s)	138, 365, 1364
Sse9I	AATT	4 cut(s)	668, 717, 1102, 1765
SseBI	AGGCCT	1 cut(s)	1952
SsiI	CCGC	9 cut(s)	870, 1189, 1627, 2079, 2082, 2088, 2091, 2097, 2102
SspDI	GGCGCC	1 cut(s)	12
SspI	AATATT	1 cut(s)	963
SspMI	CTAG	9 cut(s)	204, 560, 648, 710, 758, 1260, 1710, 1803, 1916
SstI	GAGCTC	3 cut(s)	910, 1644, 1893
StuI	AGGCCT	1 cut(s)	1952
StyD4I	CCNGG	5 cut(s)	799, 1116, 1138, 1270, 1583
StyI	CCWWGG	1 cut(s)	1329
TaaI	ACNGT	4 cut(s)	544, 1146, 1733, 2034
TaiI	ACGT	3 cut(s)	321, 681, 1877
TaqI	TCGA	8 cut(s)	40, 155, 455, 733, 910, 997, 1608, 1815
TasI	AATT	4 cut(s)	668, 717, 1102, 1765
TatI	WGTACW	2 cut(s)	134, 1017
TauI	GCSGC	7 cut(s)	873, 2081, 2084, 2090, 2093, 2099, 2105
TfiI	GAWTC	2 cut(s)	251, 656
Tru1I	TTAA	4 cut(s)	131, 150, 522, 1065
Tru9I	TTAA	4 cut(s)	131, 150, 522, 1065
TscAI	CASTG	4 cut(s)	261, 880, 1353, 1489
TseFI	GTSAC	4 cut(s)	674, 1533, 1663, 1875
Tsp45I	GTSAC	4 cut(s)	674, 1533, 1663, 1875
TspDTI	ATGAA	6 cut(s)	213, 264, 482, 1037, 1089, 1439
TspRI	CASTG	4 cut(s)	261, 880, 1353, 1489
XagI	CCTNNNNNAGG	1 cut(s)	1121
XapI	RAATTY	1 cut(s)	668
XceI	RCATGY	1 cut(s)	1216
XmnI	GAANNNNTTC	2 cut(s)	720, 1832
XspI	CTAG	9 cut(s)	204, 560, 648, 710, 758, 1260, 1710, 1803, 1916
ZrmI	AGTACT	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.