Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003616

Physical Location & Seq

Genomic Coordinates Reverse (-)

53068941 .. 53074018

Gene Structure 5078 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0385300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1893 bp

ATGGGGTTCTTCTTTGGACTGCTCGTCGGCATTGCTATCGGAATTGGGTTGATCATGGCTTTTGCTCGGAGCGAGAGTAGGCGATCCAAACGTCGCTCTGAATTGGTACTAATCAAATCTCGTTACATCATATACGAGTGTTCTGAATTGATTGGTTTTGATGGTTTCCCTTTTTATGTTCATGTGTTTGTTTTCAAAGGCCAAGATTATTGCAGCGCTTGCAAGGATGACAGTGCAAGATTCCAGAAAGCTTATTGCACCTCAGTATTATCCATCTTGGGTTATTTTCACGCAGCAACAGAAGTTGAGTTCATTTCACATTTTTCTCACATGCACTTCATGTTTCACATTGAAAATGTAACACATGTTACACTATTCTTAGAGCTAATATCAAGTCACTGGTTGACCTGGCTCAACCAACATCTTGACAAGATCTGGCCATACGTTAATGAAGCAGCATCGGAGCTGATAAGGAGCAATGTGGAACCAATACTCAAACAATATACCCCGGCTGTCTTGGATTCACTCAAATTCTCCACATTAACCCTTGGCACTGTGGCTCCACAATTTACAGGAATTTCCCTTGTTGAAAGTGAATGTGGAGCTGAGGGAGTCACTATGGAGTTTGAGATACAATGGGATGGTGATCCAGATATTGTAATTGACATCAATACCCATGTTGGTCTTGCACTACCTGTAGAGGTGAAAGATATTGGATTCACTGGGGTTTTCAGGTTAATCTTCAAACCACTAATTGACCAGTTTCCTTGTTTTGGAGCTGTTGCATATTCCTTAAGAGAAAAGAAAAAGCTGGACTTTGTGTTTAAAGTCTCAGGTAGTGAAATATCAGCAATTCCAGGAGTCTCCGAGGCTCTTGAGGAAACAATACGAGATGCTATTGAAGATTGTATTACTTGGCCAGTTCGTAACATTATTCCCATTATACCTGGCGATTACAGTGACTTGGAGTTGAAGCCCGTTGGAACATTAGAAGTGAAGCTTGTAGAAGCCAAGGAGTTAACGAATAAGGACATAGTAGGAAAATCAGATCCTTTTGCTGTGATATTCATACGTCCACTTCCTAACAGAACAAAAACCAGCAAAGTTATTGACAACGATTTAAACCCAATATGGAATGAGCACTATGAGTTCATAGTTGAAGATCAATCAACTCAACGCTTGACAGTAAGAATTTTCGATGATGAAGGACTTCAGGCTGCAGAATTCATTGGCTGTTGTCAAATTCCACTGAGTTCGCTTGAGCCTGGTAAAGTGAAGGATGTGTGGTTAAAACTTTTGAAGGATTTGGAGATCCAGAGAGATACCAAGTACCGGGGTCAGGTGCACTTGGAGCTGTTATACTGCCCTTATGGTACAGATGGGAACATTGTAAACCCGTTCGACCATGACTTCTCCTTGACCTCTTTGGAAAAGGCTTTGAAGATTGAAAATTTAACAAAAGCAGAGTTGAGAAAAATATCTACCAAGAAGAAGAAGGAAATGTTTATAAGAGGAGTACTATCTGTAACAGTTATATCTGCAGAAGACCTACCAAAAGTAGATTTTATGGGGAAGGCTGACCCGTATGTTGTCCTTGTTATGAAGAAATCTGAAGCAAAGCAAAAGACCAGGGTCATAACGAACAACTTGAATCCAGTTTGGAATCAGACATTTGACTTCATGGTGGAGGATGCATTACATGAAATGTTAATTGTCGAAGTTTGGGACCATGACACTTTTGGGAAGGATAGAATAGGGAGAGTGATCATGACACTCACCAGGGTCTTAATGGAAGGAGAATATCAGGAATGCTATCCCATAGACATTGCCAAATCTGGAAGGATTACTCTAAGTCTCAAATGGGTTGCACAGCATAAAGTCCGTGATTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009536 GO:0009888 GO:0009941 GO:0010073 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04139 map04139

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

630

Amino Acids

71.67

Weight (kDa)

5.51

Isoelectric Point (pI)

32.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_LBD	PF17047	136 - 314	7.4e-12	Synaptotagmin-like mitochondrial-lipid-binding domain
C2	PF00168	328 - 432	5.9e-25	C2 domain
C2	PF00168	505 - 606	2e-28	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003616)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26140
fragaria_vesca	FvH4_1g07720 FvH4_2g31730 FvH4_2g31730
malus_domestica	MD08G1063300.v1.1 MD15G1058100.v1.1 MD15G1058500.v1.1
prunus_persica	Prupe.1G410800_v2.0.a1
pyrus_communis	pycom08g05200 pycom15g05470 pycom15g05500
rosa_chinensis	RchiOBHm_Chr2g0093601 RchiOBHm_Chr6g0311091
rosa_laevigata	RLG00000010436 RLG00000016420
rosa_multiflora	Rmu_co8327861.1_g000001 Rmu_co8491229.1_g000001 Rmu_sc0002126.1_g000022 Rmu_sc0008967.1_g000002 Rmu_sc0012235.1_g000001
rosa_roxburghii	Rroxscaffold_2G00147960 Rroxscaffold_7G00158030
rosa_rugosa	Rorug02G0037800 Rorug02G0037800 Rorug06G0385300 Rorug06G0385400
rosa_samantha	Rh2AG084300 Rh2BG084900 Rh2CG087200 Rh2DG082900 Rh6AG499400 Rh6BG509900 Rh6CG515700 Rh6DG502300
rosa_wichuraiana	Rw6G043500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1508
AclWI	GGATC	4 cut(s)	78, 641, 1043, 1306
AcoI	YGGCCR	2 cut(s)	437, 917
AcsI	RAATTY	6 cut(s)	530, 576, 1191, 1223, 1242, 1450
AcuI	CTGAAG	2 cut(s)	1196, 1632
AfaI	GTAC	4 cut(s)	108, 1331, 1375, 1518
AfeI	AGCGCT	1 cut(s)	217
AfiI	CCNNNNNNNGG	3 cut(s)	773, 1332, 1339
AflII	CTTAAG	1 cut(s)	793
AflIII	ACRYGT	1 cut(s)	364
AhdI	GACNNNNNGTC	1 cut(s)	23
AjnI	CCWGG	6 cut(s)	407, 856, 946, 1264, 1628, 1778
AluBI	AGCT	8 cut(s)	251, 385, 466, 605, 779, 811, 1000, 1354
AluI	AGCT	8 cut(s)	251, 385, 466, 605, 779, 811, 1000, 1354
Alw21I	GWGCWC	2 cut(s)	1143, 1347
Alw26I	GTCTC	3 cut(s)	835, 868, 1859
Alw44I	GTGCAC	1 cut(s)	1343
AlwI	GGATC	4 cut(s)	78, 641, 1043, 1306
Aor51HI	AGCGCT	1 cut(s)	217
AoxI	GGCC	3 cut(s)	199, 437, 917
ApaLI	GTGCAC	1 cut(s)	1343
ApeKI	GCWGC	4 cut(s)	213, 293, 455, 1217
ApoI	RAATTY	6 cut(s)	530, 576, 1191, 1223, 1242, 1450
Asp700I	GAANNNNTTC	1 cut(s)	1209
AspLEI	GCGC	1 cut(s)	218
AspS9I	GGNCC	1 cut(s)	1726
AsuC2I	CCSGG	2 cut(s)	509, 1334
AsuHPI	GGTGA	3 cut(s)	656, 715, 1768
AvaII	GGWCC	1 cut(s)	1726
BaeGI	GKGCMC	1 cut(s)	1347
BalI	TGGCCA	2 cut(s)	439, 919
BbsI	GAAGAC	1 cut(s)	1551
Bbv12I	GWGCWC	2 cut(s)	1143, 1347
BbvCI	CCTCAGC	1 cut(s)	606
BbvI	GCAGC	4 cut(s)	225, 305, 467, 1204
BccI	CCATC	4 cut(s)	155, 281, 635, 1373
BcgI	CGANNNNNNTGC	2 cut(s)	19, 53
BciT130I	CCWGG	6 cut(s)	409, 858, 948, 1266, 1630, 1780
BclI	TGATCA	2 cut(s)	51, 1764
BcnI	CCSGG	2 cut(s)	509, 1334
BcoDI	GTCTC	3 cut(s)	835, 868, 1859
BfmI	CTRYAG	3 cut(s)	696, 1218, 1539
BfoI	RGCGCY	1 cut(s)	219
BfrI	CTTAAG	1 cut(s)	793
BglII	AGATCT	1 cut(s)	432
BisI	GCNGC	4 cut(s)	214, 294, 456, 1218
BlsI	GCNGC	4 cut(s)	215, 295, 457, 1219
BmcAI	AGTACT	1 cut(s)	1518
Bme1390I	CCNGG	8 cut(s)	409, 509, 858, 948, 1266, 1334, 1630, 1780
Bme18I	GGWCC	1 cut(s)	1726
BmeRI	GACNNNNNGTC	1 cut(s)	23
BmgT120I	GGNCC	1 cut(s)	1726
BmiI	GGNNCC	3 cut(s)	486, 561, 1727
BmrFI	CCNGG	8 cut(s)	409, 509, 858, 948, 1266, 1334, 1630, 1780
BmrI	ACTGGG	1 cut(s)	732
BmsI	GCATC	3 cut(s)	467, 883, 1681
BmuI	ACTGGG	1 cut(s)	732
BoxI	GACNNNNGTC	1 cut(s)	1631
BpiI	GAAGAC	1 cut(s)	1551
Bpu10I	CCTNAGC	1 cut(s)	606
BpuEI	CTTGAG	2 cut(s)	896, 1280
BpuMI	CCSGG	2 cut(s)	509, 1334
BsaBI	GATNNNNATC	1 cut(s)	645
BsaJI	CCNNGG	7 cut(s)	507, 547, 867, 1011, 1333, 1629, 1779
BsaXI	ACNNNNNCTCC	4 cut(s)	61, 91, 544, 574
Bsc4I	CCNNNNNNNGG	3 cut(s)	773, 1332, 1339
Bse1I	ACTGG	5 cut(s)	404, 727, 760, 920, 1655
Bse3DI	GCAATG	3 cut(s)	30, 484, 1824
Bse8I	GATNNNNATC	1 cut(s)	645
BseBI	CCWGG	6 cut(s)	409, 858, 948, 1266, 1630, 1780
BseDI	CCNNGG	7 cut(s)	507, 547, 867, 1011, 1333, 1629, 1779
BseGI	GGATG	4 cut(s)	232, 646, 1285, 1696
BseJI	GATNNNNATC	1 cut(s)	645
BseLI	CCNNNNNNNGG	3 cut(s)	773, 1332, 1339
BseMI	GCAATG	3 cut(s)	30, 484, 1824
BseMII	CTCAG	4 cut(s)	276, 597, 846, 1241
BseNI	ACTGG	5 cut(s)	404, 727, 760, 920, 1655
BseRI	GAGGAG	1 cut(s)	1527
BseSI	GKGCMC	1 cut(s)	1347
BseXI	GCAGC	4 cut(s)	225, 305, 467, 1204
BshFI	GGCC	3 cut(s)	201, 439, 919
BsiHKAI	GWGCWC	2 cut(s)	1143, 1347
BsiSI	CCGG	2 cut(s)	509, 1333
BslFI	GGGAC	1 cut(s)	1739
BslI	CCNNNNNNNGG	3 cut(s)	773, 1332, 1339
BsmAI	GTCTC	3 cut(s)	835, 868, 1859
BsmFI	GGGAC	1 cut(s)	1739
BsmI	GAATGC	1 cut(s)	1814
BsnI	GGCC	3 cut(s)	201, 439, 919
Bsp1286I	GDGCHC	2 cut(s)	1143, 1347
Bsp143I	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
BspANI	GGCC	3 cut(s)	201, 439, 919
BspCNI	CTCAG	4 cut(s)	275, 598, 845, 1242
BspHI	TCATGA	1 cut(s)	1767
BspLI	GGNNCC	3 cut(s)	486, 561, 1727
BspMAI	CTGCAG	2 cut(s)	1222, 1543
BspPI	GGATC	4 cut(s)	78, 641, 1043, 1306
BspTI	CTTAAG	1 cut(s)	793
BsrDI	GCAATG	3 cut(s)	30, 484, 1824
BsrI	ACTGG	5 cut(s)	404, 727, 760, 920, 1655
BssECI	CCNNGG	7 cut(s)	507, 547, 867, 1011, 1333, 1629, 1779
BssMI	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
BssT1I	CCWWGG	2 cut(s)	547, 1011
Bst2UI	CCWGG	6 cut(s)	409, 858, 948, 1266, 1630, 1780
Bst4CI	ACNGT	5 cut(s)	233, 556, 959, 1186, 1531
BstAFI	CTTAAG	1 cut(s)	793
BstAPI	GCANNNNNTGC	1 cut(s)	219
BstC8I	GCNNGC	1 cut(s)	220
BstDEI	CTNAG	6 cut(s)	262, 379, 606, 832, 1250, 1850
BstF5I	GGATG	4 cut(s)	232, 646, 1285, 1696
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	1 cut(s)	218
BstKTI	GATC	8 cut(s)	54, 86, 435, 649, 1051, 1165, 1314, 1767
BstMAI	GTCTC	3 cut(s)	835, 868, 1859
BstMBI	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
BstMWI	GCNNNNNNNGC	2 cut(s)	219, 1351
BstNI	CCWGG	6 cut(s)	409, 858, 948, 1266, 1630, 1780
BstNSI	RCATGY	2 cut(s)	334, 368
BstPAI	GACNNNNGTC	1 cut(s)	1631
BstSCI	CCNGG	8 cut(s)	407, 507, 856, 946, 1264, 1332, 1628, 1778
BstSFI	CTRYAG	3 cut(s)	696, 1218, 1539
BstSLI	GKGCMC	1 cut(s)	1347
BstV1I	GCAGC	4 cut(s)	225, 305, 467, 1204
BstV2I	GAAGAC	1 cut(s)	1551
BstX2I	RGATCY	3 cut(s)	432, 1048, 1311
BstYI	RGATCY	3 cut(s)	432, 1048, 1311
BsuRI	GGCC	3 cut(s)	201, 439, 919
BtsCI	GGATG	4 cut(s)	232, 646, 1285, 1696
BtsIMutI	CAGTG	6 cut(s)	238, 397, 552, 720, 964, 1247
Cac8I	GCNNGC	1 cut(s)	220
CciI	TCATGA	1 cut(s)	1767
CfoI	GCGC	1 cut(s)	218
Cfr13I	GGNCC	1 cut(s)	1726
Csp6I	GTAC	4 cut(s)	107, 1330, 1374, 1517
CviQI	GTAC	4 cut(s)	107, 1330, 1374, 1517
DdeI	CTNAG	6 cut(s)	262, 379, 606, 832, 1250, 1850
DpnI	GATC	8 cut(s)	53, 85, 434, 648, 1050, 1164, 1313, 1766
DpnII	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
DraI	TTTAAA	2 cut(s)	826, 1122
DriI	GACNNNNNGTC	1 cut(s)	23
EaeI	YGGCCR	2 cut(s)	437, 917
Eam1105I	GACNNNNNGTC	1 cut(s)	23
Eco130I	CCWWGG	2 cut(s)	547, 1011
Eco47I	GGWCC	1 cut(s)	1726
Eco47III	AGCGCT	1 cut(s)	217
Eco57I	CTGAAG	2 cut(s)	1196, 1632
EcoRI	GAATTC	1 cut(s)	1223
EcoRII	CCWGG	6 cut(s)	407, 856, 946, 1264, 1628, 1778
EcoT14I	CCWWGG	2 cut(s)	547, 1011
EcoT22I	ATGCAT	1 cut(s)	1696
ErhI	CCWWGG	2 cut(s)	547, 1011
FalI	AAGNNNNNCTT	4 cut(s)	800, 832, 984, 1016
FaqI	GGGAC	1 cut(s)	1739
FbaI	TGATCA	2 cut(s)	51, 1764
Fnu4HI	GCNGC	4 cut(s)	214, 294, 456, 1218
FokI	GGATG	4 cut(s)	239, 653, 1292, 1703
Fsp4HI	GCNGC	4 cut(s)	214, 294, 456, 1218
GlaI	GCGC	1 cut(s)	217
GluI	GCNGC	4 cut(s)	214, 294, 456, 1218
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	3 cut(s)	201, 439, 919
HapII	CCGG	2 cut(s)	509, 1333
HhaI	GCGC	1 cut(s)	218
Hin6I	GCGC	1 cut(s)	216
HinP1I	GCGC	1 cut(s)	216
HincII	GTYRAC	2 cut(s)	405, 1020
HindII	GTYRAC	2 cut(s)	405, 1020
HindIII	AAGCTT	2 cut(s)	249, 998
HinfI	GANTC	8 cut(s)	240, 521, 612, 717, 861, 1651, 1663, 1886
HpaI	GTTAAC	1 cut(s)	1020
HpaII	CCGG	2 cut(s)	509, 1333
HphI	GGTGA	3 cut(s)	656, 715, 1768
Hpy166II	GTNNAC	5 cut(s)	405, 1020, 1076, 1345, 1393
Hpy188I	TCNGA	9 cut(s)	41, 69, 100, 145, 463, 868, 1048, 1612, 1668
Hpy188III	TCNNGA	9 cut(s)	244, 425, 650, 875, 1315, 1768, 1805, 1836, 1890
Hpy8I	GTNNAC	5 cut(s)	405, 1020, 1076, 1345, 1393
Hpy99I	CGWCG	2 cut(s)	29, 96
HpyAV	CCTTC	8 cut(s)	1199, 1270, 1294, 1489, 1567, 1738, 1787, 1833
HpyCH4III	ACNGT	5 cut(s)	233, 556, 959, 1186, 1531
HpyCH4IV	ACGT	3 cut(s)	91, 444, 1072
HpyF10VI	GCNNNNNNNGC	2 cut(s)	219, 1351
HpyF3I	CTNAG	6 cut(s)	262, 379, 606, 832, 1250, 1850
HpySE526I	ACGT	3 cut(s)	91, 444, 1072
HspAI	GCGC	1 cut(s)	216
Ksp22I	TGATCA	2 cut(s)	51, 1764
KspAI	GTTAAC	1 cut(s)	1020
Kzo9I	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
LmnI	GCTCC	7 cut(s)	69, 463, 474, 565, 602, 776, 1351
Lsp1109I	GCAGC	4 cut(s)	225, 305, 467, 1204
LweI	GCATC	3 cut(s)	467, 883, 1681
MaeII	ACGT	3 cut(s)	91, 444, 1072
MaeIII	GTNAC	8 cut(s)	122, 358, 367, 395, 613, 926, 959, 1525
MalI	GATC	8 cut(s)	53, 85, 434, 648, 1050, 1164, 1313, 1766
MboI	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
MboII	GAAGA	8 cut(s)	733, 914, 1172, 1453, 1501, 1504, 1556, 1615
MflI	RGATCY	3 cut(s)	432, 1048, 1311
MhlI	GDGCHC	2 cut(s)	1143, 1347
MlsI	TGGCCA	2 cut(s)	439, 919
MluNI	TGGCCA	2 cut(s)	439, 919
MlyI	GAGTC	2 cut(s)	621, 870
MmeI	TCCRAC	1 cut(s)	961
MnlI	CCTC	8 cut(s)	271, 601, 694, 862, 871, 1432, 1505, 1681
Mox20I	TGGCCA	2 cut(s)	439, 919
Mph1103I	ATGCAT	1 cut(s)	1696
MroXI	GAANNNNTTC	1 cut(s)	1209
MscI	TGGCCA	2 cut(s)	439, 919
Msp20I	TGGCCA	2 cut(s)	439, 919
MspCI	CTTAAG	1 cut(s)	793
MspI	CCGG	2 cut(s)	509, 1333
MspR9I	CCNGG	8 cut(s)	409, 509, 858, 948, 1266, 1334, 1630, 1780
Mva1269I	GAATGC	1 cut(s)	1814
MvaI	CCWGG	6 cut(s)	409, 858, 948, 1266, 1630, 1780
MwoI	GCNNNNNNNGC	2 cut(s)	219, 1351
NciI	CCSGG	2 cut(s)	509, 1334
NdeII	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
NlaIV	GGNNCC	3 cut(s)	486, 561, 1727
NmuCI	GTSAC	3 cut(s)	395, 613, 959
NsiI	ATGCAT	1 cut(s)	1696
NspI	RCATGY	2 cut(s)	334, 368
PagI	TCATGA	1 cut(s)	1767
PciI	ACATGT	1 cut(s)	364
PctI	GAATGC	1 cut(s)	1814
PdmI	GAANNNNTTC	1 cut(s)	1209
PfeI	GAWTC	6 cut(s)	240, 521, 717, 1651, 1663, 1886
PfoI	TCCNGGA	1 cut(s)	856
PkrI	GCNGC	4 cut(s)	215, 295, 457, 1219
PleI	GAGTC	2 cut(s)	620, 869
PpsI	GAGTC	2 cut(s)	620, 869
PscI	ACATGT	1 cut(s)	364
PshAI	GACNNNNGTC	1 cut(s)	1631
PsiI	TTATAA	1 cut(s)	1508
Psp6I	CCWGG	6 cut(s)	407, 856, 946, 1264, 1628, 1778
PspGI	CCWGG	6 cut(s)	407, 856, 946, 1264, 1628, 1778
PspN4I	GGNNCC	3 cut(s)	486, 561, 1727
PspPI	GGNCC	1 cut(s)	1726
PstI	CTGCAG	2 cut(s)	1222, 1543
PsuI	RGATCY	3 cut(s)	432, 1048, 1311
RsaI	GTAC	4 cut(s)	108, 1331, 1375, 1518
RsaNI	GTAC	4 cut(s)	107, 1330, 1374, 1517
SatI	GCNGC	4 cut(s)	214, 294, 456, 1218
Sau3AI	GATC	8 cut(s)	51, 83, 432, 646, 1048, 1162, 1311, 1764
Sau96I	GGNCC	1 cut(s)	1726
ScaI	AGTACT	1 cut(s)	1518
SchI	GAGTC	2 cut(s)	621, 870
ScrFI	CCNGG	8 cut(s)	409, 509, 858, 948, 1266, 1334, 1630, 1780
SduI	GDGCHC	2 cut(s)	1143, 1347
SfaNI	GCATC	3 cut(s)	467, 883, 1681
SfcI	CTRYAG	3 cut(s)	696, 1218, 1539
SinI	GGWCC	1 cut(s)	1726
SmlI	CTYRAG	3 cut(s)	793, 875, 1259
SmoI	CTYRAG	3 cut(s)	793, 875, 1259
StyD4I	CCNGG	8 cut(s)	407, 507, 856, 946, 1264, 1332, 1628, 1778
StyI	CCWWGG	2 cut(s)	547, 1011
TaaI	ACNGT	5 cut(s)	233, 556, 959, 1186, 1531
TaiI	ACGT	3 cut(s)	94, 447, 1075
TaqI	TCGA	3 cut(s)	1197, 1401, 1716
TatI	WGTACW	1 cut(s)	1516
TfiI	GAWTC	6 cut(s)	240, 521, 717, 1651, 1663, 1886
TscAI	CASTG	6 cut(s)	238, 404, 559, 727, 964, 1254
TseFI	GTSAC	3 cut(s)	395, 613, 959
TseI	GCWGC	4 cut(s)	213, 293, 455, 1217
Tsp45I	GTSAC	3 cut(s)	395, 613, 959
TspGWI	ACGGA	1 cut(s)	1871
TspRI	CASTG	6 cut(s)	238, 404, 559, 727, 964, 1254
Vha464I	CTTAAG	1 cut(s)	793
VneI	GTGCAC	1 cut(s)	1343
VpaK11BI	GGWCC	1 cut(s)	1726
XapI	RAATTY	6 cut(s)	530, 576, 1191, 1223, 1242, 1450
XceI	RCATGY	2 cut(s)	334, 368
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1736, 1786
XmnI	GAANNNNTTC	1 cut(s)	1209
ZrmI	AGTACT	1 cut(s)	1518
Zsp2I	ATGCAT	1 cut(s)	1696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.