FvH4_3g14410

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
8899017 .. 8899682
666 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g14410.t1

Sequence Viewer

Length: 222 bp
ATGGTTCACCGCAAAGCAGGCTCCGCTGTTTACATGATTCCCTTCATCCTTTTGCTAGTTTTTTCATCAGACATAGCTTTTGCTAGAGAATTGAAGAGCACTGGGAATCATGAAATGGAGTACAGGAAGACTAATAATCAAGCAAGGAACTTAAACATAAGGAAACTGCTACCATCCATTGACGTACCAAAGCCACCTGCTATTCCAGCGCCTCATGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

74

Amino Acids

8.18

Weight (kDa)

10.11

Isoelectric Point (pI)

35.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 205
AciI CCGC 2 cut(s) 10, 24
AfaI GTAC 2 cut(s) 122, 186
AgsI TTSAA 1 cut(s) 94
AluBI AGCT 1 cut(s) 77
AluI AGCT 1 cut(s) 77
Alw21I GWGCWC 1 cut(s) 101
ArsI GACNNNNNNTTYG 2 cut(s) 62, 94
AspLEI GCGC 1 cut(s) 211
BbsI GAAGAC 1 cut(s) 134
Bbv12I GWGCWC 1 cut(s) 101
BccI CCATC 1 cut(s) 181
BfaI CTAG 2 cut(s) 56, 84
BfoI RGCGCY 1 cut(s) 212
BfuAI ACCTGC 1 cut(s) 205
BmiI GGNNCC 1 cut(s) 22
BmrI ACTGGG 1 cut(s) 111
BmuI ACTGGG 1 cut(s) 111
BpiI GAAGAC 1 cut(s) 134
Bse1I ACTGG 1 cut(s) 106
BseGI GGATG 2 cut(s) 45, 173
BseNI ACTGG 1 cut(s) 106
BsiHKAI GWGCWC 1 cut(s) 101
Bsp1286I GDGCHC 1 cut(s) 101
BspACI CCGC 2 cut(s) 10, 24
BspHI TCATGA 1 cut(s) 109
BspLI GGNNCC 1 cut(s) 22
BspMI ACCTGC 1 cut(s) 205
BspQI GCTCTTC 1 cut(s) 89
BsrI ACTGG 1 cut(s) 106
Bst6I CTCTTC 1 cut(s) 89
BstC8I GCNNGC 1 cut(s) 19
BstF5I GGATG 2 cut(s) 45, 173
BstH2I RGCGCY 1 cut(s) 212
BstHHI GCGC 1 cut(s) 211
BstMWI GCNNNNNNNGC 3 cut(s) 18, 23, 206
BstV2I GAAGAC 1 cut(s) 134
BtsCI GGATG 2 cut(s) 45, 173
BtsIMutI CAGTG 1 cut(s) 99
BveI ACCTGC 1 cut(s) 205
Cac8I GCNNGC 1 cut(s) 19
CciI TCATGA 1 cut(s) 109
CfoI GCGC 1 cut(s) 211
Csp6I GTAC 2 cut(s) 121, 185
CviAII CATG 3 cut(s) 34, 110, 215
CviJI RGCY 3 cut(s) 21, 77, 193
CviKI_1 RGCY 3 cut(s) 21, 77, 193
CviQI GTAC 2 cut(s) 121, 185
Eam1104I CTCTTC 1 cut(s) 89
EarI CTCTTC 1 cut(s) 89
FaeI CATG 3 cut(s) 37, 113, 218
FaiI YATR 5 cut(s) 35, 74, 111, 158, 216
FatI CATG 3 cut(s) 33, 109, 214
FokI GGATG 2 cut(s) 32, 160
FspBI CTAG 2 cut(s) 56, 84
GlaI GCGC 1 cut(s) 210
HaeII RGCGCY 1 cut(s) 212
HhaI GCGC 1 cut(s) 211
Hin1II CATG 3 cut(s) 37, 113, 218
Hin6I GCGC 1 cut(s) 209
HinP1I GCGC 1 cut(s) 209
HinfI GANTC 2 cut(s) 37, 106
Hpy166II GTNNAC 2 cut(s) 7, 31
Hpy188I TCNGA 1 cut(s) 70
Hpy188III TCNNGA 1 cut(s) 110
Hpy8I GTNNAC 2 cut(s) 7, 31
HpyAV CCTTC 1 cut(s) 52
HpyCH4IV ACGT 1 cut(s) 183
HpyF10VI GCNNNNNNNGC 3 cut(s) 18, 23, 206
HpySE526I ACGT 1 cut(s) 183
Hsp92II CATG 3 cut(s) 37, 113, 218
HspAI GCGC 1 cut(s) 209
LguI GCTCTTC 1 cut(s) 89
LmnI GCTCC 1 cut(s) 26
LpnPI CCDG 4 cut(s) 3, 87, 109, 210
MaeI CTAG 2 cut(s) 56, 84
MaeII ACGT 1 cut(s) 183
MboII GAAGA 2 cut(s) 106, 139
MhlI GDGCHC 1 cut(s) 101
MluCI AATT 1 cut(s) 89
MnlI CCTC 1 cut(s) 222
MseI TTAA 1 cut(s) 152
MspA1I CMGCKG 1 cut(s) 26
MwoI GCNNNNNNNGC 3 cut(s) 18, 23, 206
NlaIII CATG 3 cut(s) 37, 113, 218
NlaIV GGNNCC 1 cut(s) 22
PagI TCATGA 1 cut(s) 109
PaqCI CACCTGC 1 cut(s) 205
PciSI GCTCTTC 1 cut(s) 89
PfeI GAWTC 2 cut(s) 37, 106
PspN4I GGNNCC 1 cut(s) 22
RsaI GTAC 2 cut(s) 122, 186
RsaNI GTAC 2 cut(s) 121, 185
SapI GCTCTTC 1 cut(s) 89
SaqAI TTAA 1 cut(s) 152
SduI GDGCHC 1 cut(s) 101
SetI ASST 3 cut(s) 79, 186, 199
Sse9I AATT 1 cut(s) 89
SsiI CCGC 2 cut(s) 10, 24
SspMI CTAG 2 cut(s) 56, 84
TaiI ACGT 1 cut(s) 186
TasI AATT 1 cut(s) 89
TatI WGTACW 1 cut(s) 120
TfiI GAWTC 2 cut(s) 37, 106
Tru1I TTAA 1 cut(s) 152
Tru9I TTAA 1 cut(s) 152
TscAI CASTG 1 cut(s) 106
TspDTI ATGAA 3 cut(s) 34, 54, 126
TspRI CASTG 1 cut(s) 106
XspI CTAG 2 cut(s) 56, 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.