Rh1AG336000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
57015679 .. 57016365
687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG336000.1

Sequence Viewer

Length: 213 bp
ATGGTTCAGAAGGCCTGCGTTGTTTTCATGATTCCCTTCATCTTATTGTTATTGTTCTCGTCCAACATAGTCCATGCTGAAGTTTTCGATATTCCAAAAACCAGCAAAGAGAAGGCGAAGCTGCATGTGGACATGGAGGTTATTAGGGTGAAGAGAATAGGCGTACCAGTACCTCCTACACCTAGAGCGGGTCAAGGCCGGCATGGACGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

7.85

Weight (kDa)

10.29

Isoelectric Point (pI)

41.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 188
AciI CCGC 1 cut(s) 188
AcuI CTGAAG 1 cut(s) 99
AfaI GTAC 2 cut(s) 165, 171
AfiI CCNNNNNNNGG 1 cut(s) 188
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
AoxI GGCC 2 cut(s) 12, 196
ApeKI GCWGC 1 cut(s) 121
AsuHPI GGTGA 1 cut(s) 160
BbvI GCAGC 1 cut(s) 108
BfaI CTAG 1 cut(s) 183
BisI GCNGC 1 cut(s) 122
BlsI GCNGC 1 cut(s) 123
Bsc4I CCNNNNNNNGG 1 cut(s) 188
Bse118I RCCGGY 1 cut(s) 198
Bse1I ACTGG 1 cut(s) 167
BseLI CCNNNNNNNGG 1 cut(s) 188
BseNI ACTGG 1 cut(s) 167
BseXI GCAGC 1 cut(s) 108
BshFI GGCC 2 cut(s) 14, 198
BsiSI CCGG 1 cut(s) 199
BslI CCNNNNNNNGG 1 cut(s) 188
BsnI GGCC 2 cut(s) 14, 198
BspACI CCGC 1 cut(s) 188
BspANI GGCC 2 cut(s) 14, 198
BspHI TCATGA 1 cut(s) 27
BsrBI CCGCTC 1 cut(s) 188
BsrFI RCCGGY 1 cut(s) 198
BsrI ACTGG 1 cut(s) 167
BssAI RCCGGY 1 cut(s) 198
Bst6I CTCTTC 1 cut(s) 146
BstC8I GCNNGC 2 cut(s) 16, 200
BstNSI RCATGY 1 cut(s) 128
BstV1I GCAGC 1 cut(s) 108
BsuRI GGCC 2 cut(s) 14, 198
Cac8I GCNNGC 2 cut(s) 16, 200
CciI TCATGA 1 cut(s) 27
Cfr10I RCCGGY 1 cut(s) 198
Csp6I GTAC 2 cut(s) 164, 170
CviAII CATG 5 cut(s) 28, 74, 125, 133, 203
CviJI RGCY 3 cut(s) 14, 121, 198
CviKI_1 RGCY 3 cut(s) 14, 121, 198
CviQI GTAC 2 cut(s) 164, 170
Eam1104I CTCTTC 1 cut(s) 146
EarI CTCTTC 1 cut(s) 146
Eco147I AGGCCT 1 cut(s) 14
Eco57I CTGAAG 1 cut(s) 99
FaeI CATG 5 cut(s) 31, 77, 128, 136, 206
FaiI YATR 6 cut(s) 29, 68, 75, 126, 134, 204
FatI CATG 5 cut(s) 27, 73, 124, 132, 202
FauI CCCGC 1 cut(s) 181
Fnu4HI GCNGC 1 cut(s) 122
Fsp4HI GCNGC 1 cut(s) 122
FspBI CTAG 1 cut(s) 183
GluI GCNGC 1 cut(s) 122
HaeIII GGCC 2 cut(s) 14, 198
HapII CCGG 1 cut(s) 199
Hin1II CATG 5 cut(s) 31, 77, 128, 136, 206
HinfI GANTC 1 cut(s) 31
HpaII CCGG 1 cut(s) 199
HphI GGTGA 1 cut(s) 160
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 1 cut(s) 9
Hpy188III TCNNGA 1 cut(s) 28
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 3 cut(s) 4, 46, 106
HpyCH4IV ACGT 1 cut(s) 208
HpyCH4V TGCA 1 cut(s) 124
HpySE526I ACGT 1 cut(s) 208
Hsp92II CATG 5 cut(s) 31, 77, 128, 136, 206
KroI GCCGGC 1 cut(s) 198
KroNI GCCGGC 1 cut(s) 200
LpnPI CCDG 3 cut(s) 28, 115, 180
Lsp1109I GCAGC 1 cut(s) 108
MaeI CTAG 1 cut(s) 183
MaeII ACGT 1 cut(s) 208
MbiI CCGCTC 1 cut(s) 188
MboII GAAGA 1 cut(s) 163
MmeI TCCRAC 1 cut(s) 87
MnlI CCTC 2 cut(s) 130, 183
MroNI GCCGGC 1 cut(s) 198
MspI CCGG 1 cut(s) 199
NaeI GCCGGC 1 cut(s) 200
NgoMIV GCCGGC 1 cut(s) 198
NlaIII CATG 5 cut(s) 31, 77, 128, 136, 206
NspI RCATGY 1 cut(s) 128
PagI TCATGA 1 cut(s) 27
PceI AGGCCT 1 cut(s) 14
PdiI GCCGGC 1 cut(s) 200
PfeI GAWTC 1 cut(s) 31
PkrI GCNGC 1 cut(s) 123
RsaI GTAC 2 cut(s) 165, 171
RsaNI GTAC 2 cut(s) 164, 170
SatI GCNGC 1 cut(s) 122
SetI ASST 5 cut(s) 123, 141, 175, 184, 211
SseBI AGGCCT 1 cut(s) 14
SsiI CCGC 1 cut(s) 188
SspMI CTAG 1 cut(s) 183
StuI AGGCCT 1 cut(s) 14
TaiI ACGT 1 cut(s) 211
TaqI TCGA 1 cut(s) 87
TfiI GAWTC 1 cut(s) 31
TseI GCWGC 1 cut(s) 121
TspDTI ATGAA 2 cut(s) 16, 28
XceI RCATGY 1 cut(s) 128
XspI CTAG 1 cut(s) 183
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.