Prupe.2G064800_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
8831477 .. 8832260
784 bp
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UTR
Exon/CDS
Intron
Prupe.2G064800.1

Sequence Viewer

Length: 198 bp
ATGGTTCCCAAGGCCAACGCTGTTTACATGAGTCTCTTCATCCTATTGCTGTTGTTCTCATCCAAAGTCGTGTTTGCCAGAGTTTCCCAATTTTCAGAAACCAAAGAGAAGATCAATACGGAGTTTTCGAAGATGAAGATTATTGACCTTAGACTATACAAATGTATAAATCCGCCAGGCGCTCCAGGTTGTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

66

Amino Acids

7.38

Weight (kDa)

9.76

Isoelectric Point (pI)

45.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 173
AjnI CCWGG 2 cut(s) 175, 184
Alw26I GTCTC 1 cut(s) 38
AoxI GGCC 1 cut(s) 12
AspLEI GCGC 1 cut(s) 182
AsuII TTCGAA 1 cut(s) 128
BciT130I CCWGG 2 cut(s) 177, 186
BcoDI GTCTC 1 cut(s) 38
BfoI RGCGCY 1 cut(s) 183
Bme1390I CCNGG 2 cut(s) 177, 186
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 2 cut(s) 177, 186
BpmI CTGGAG 1 cut(s) 168
Bpu14I TTCGAA 1 cut(s) 128
BsaJI CCNNGG 1 cut(s) 9
BseBI CCWGG 2 cut(s) 177, 186
BseDI CCNNGG 1 cut(s) 9
BseGI GGATG 2 cut(s) 39, 59
BshFI GGCC 1 cut(s) 14
BsmAI GTCTC 1 cut(s) 38
BsnI GGCC 1 cut(s) 14
Bsp119I TTCGAA 1 cut(s) 128
Bsp143I GATC 1 cut(s) 111
BspACI CCGC 1 cut(s) 173
BspANI GGCC 1 cut(s) 14
BspLI GGNNCC 1 cut(s) 6
BspT104I TTCGAA 1 cut(s) 128
BssECI CCNNGG 1 cut(s) 9
BssMI GATC 1 cut(s) 111
BssT1I CCWWGG 1 cut(s) 9
Bst2UI CCWGG 2 cut(s) 177, 186
Bst6I CTCTTC 1 cut(s) 41
BstBI TTCGAA 1 cut(s) 128
BstDEI CTNAG 1 cut(s) 149
BstF5I GGATG 2 cut(s) 39, 59
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 1 cut(s) 114
BstMAI GTCTC 1 cut(s) 38
BstMBI GATC 1 cut(s) 111
BstNI CCWGG 2 cut(s) 177, 186
BstSCI CCNGG 2 cut(s) 175, 184
BsuRI GGCC 1 cut(s) 14
BtsCI GGATG 2 cut(s) 39, 59
CfoI GCGC 1 cut(s) 182
CviAII CATG 1 cut(s) 28
CviJI RGCY 1 cut(s) 14
CviKI_1 RGCY 1 cut(s) 14
DdeI CTNAG 1 cut(s) 149
DpnI GATC 1 cut(s) 113
DpnII GATC 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 41
EarI CTCTTC 1 cut(s) 41
EciI GGCGGA 1 cut(s) 162
Eco130I CCWWGG 1 cut(s) 9
EcoRII CCWGG 2 cut(s) 175, 184
EcoT14I CCWWGG 1 cut(s) 9
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 1 cut(s) 31
FaiI YATR 3 cut(s) 29, 157, 167
FatI CATG 1 cut(s) 27
FokI GGATG 2 cut(s) 26, 46
GlaI GCGC 1 cut(s) 181
GsuI CTGGAG 1 cut(s) 168
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 1 cut(s) 14
HhaI GCGC 1 cut(s) 182
Hin1II CATG 1 cut(s) 31
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HinfI GANTC 1 cut(s) 31
Hpy166II GTNNAC 1 cut(s) 25
Hpy188I TCNGA 1 cut(s) 97
Hpy8I GTNNAC 1 cut(s) 25
HpyF3I CTNAG 1 cut(s) 149
Hsp92II CATG 1 cut(s) 31
HspAI GCGC 1 cut(s) 180
Kzo9I GATC 1 cut(s) 111
LmnI GCTCC 1 cut(s) 187
LpnPI CCDG 4 cut(s) 91, 162, 171, 189
MalI GATC 1 cut(s) 113
MboI GATC 1 cut(s) 111
MboII GAAGA 4 cut(s) 28, 121, 142, 148
MluCI AATT 1 cut(s) 89
MlyI GAGTC 1 cut(s) 40
MspR9I CCNGG 2 cut(s) 177, 186
MvaI CCWGG 2 cut(s) 177, 186
NdeII GATC 1 cut(s) 111
NlaIII CATG 1 cut(s) 31
NlaIV GGNNCC 1 cut(s) 6
NspV TTCGAA 1 cut(s) 128
PcsI WCGNNNNNNNCGW 1 cut(s) 125
PleI GAGTC 1 cut(s) 39
PpsI GAGTC 1 cut(s) 39
Psp6I CCWGG 2 cut(s) 175, 184
PspGI CCWGG 2 cut(s) 175, 184
PspN4I GGNNCC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 111
SchI GAGTC 1 cut(s) 40
ScrFI CCNGG 2 cut(s) 177, 186
SetI ASST 2 cut(s) 150, 190
SfuI TTCGAA 1 cut(s) 128
SgeI CNNG 6 cut(s) 22, 40, 82, 90, 188, 189
Sse9I AATT 1 cut(s) 89
SsiI CCGC 1 cut(s) 173
StyD4I CCNGG 2 cut(s) 175, 184
StyI CCWWGG 1 cut(s) 9
TaqI TCGA 1 cut(s) 128
TasI AATT 1 cut(s) 89
TspDTI ATGAA 2 cut(s) 28, 149
TspGWI ACGGA 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.