FvH4_3g20150

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
13251235 .. 13252257
1023 bp
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UTR
Exon/CDS
Intron
FvH4_3g20150.t1

Sequence Viewer

Length: 207 bp
ATGGTTCAGAAGAACTACTGCCATATTTTCATGGTTCCCTTCATTCTATTGCTGTTGTTCTCGTCCAACATAATCCATGCTGAAGTTTCTGATGAAATGCCAACAACCAAACCGAAGGCCAGGCTACATGCGAAAATGAAGCTTATTACGGTGAGGAAGATAGGTGTACGAGTACCTTCTGCCCCGAAAGATAAAATAGGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

7.74

Weight (kDa)

10.1

Isoelectric Point (pI)

54.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 102
AfaI GTAC 2 cut(s) 168, 174
AjnI CCWGG 1 cut(s) 119
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
AoxI GGCC 1 cut(s) 117
AsuHPI GGTGA 1 cut(s) 163
BciT130I CCWGG 1 cut(s) 121
Bme1390I CCNGG 1 cut(s) 121
BmiI GGNNCC 1 cut(s) 36
BmrFI CCNGG 1 cut(s) 121
BseBI CCWGG 1 cut(s) 121
BshFI GGCC 1 cut(s) 119
BsnI GGCC 1 cut(s) 119
BspANI GGCC 1 cut(s) 119
BspLI GGNNCC 1 cut(s) 36
Bst2UI CCWGG 1 cut(s) 121
Bst4CI ACNGT 1 cut(s) 151
BstNI CCWGG 1 cut(s) 121
BstNSI RCATGY 1 cut(s) 131
BstSCI CCNGG 1 cut(s) 119
BsuRI GGCC 1 cut(s) 119
Csp6I GTAC 2 cut(s) 167, 173
CviAII CATG 3 cut(s) 31, 77, 128
CviJI RGCY 3 cut(s) 119, 124, 142
CviKI_1 RGCY 3 cut(s) 119, 124, 142
CviQI GTAC 2 cut(s) 167, 173
Eco57I CTGAAG 1 cut(s) 102
EcoRII CCWGG 1 cut(s) 119
FaeI CATG 3 cut(s) 34, 80, 131
FaiI YATR 5 cut(s) 24, 32, 71, 78, 129
FatI CATG 3 cut(s) 30, 76, 127
HaeIII GGCC 1 cut(s) 119
Hin1II CATG 3 cut(s) 34, 80, 131
HindIII AAGCTT 1 cut(s) 140
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 1 cut(s) 167
Hpy188I TCNGA 2 cut(s) 9, 91
Hpy8I GTNNAC 1 cut(s) 167
HpyAV CCTTC 3 cut(s) 49, 109, 186
HpyCH4III ACNGT 1 cut(s) 151
Hsp92II CATG 3 cut(s) 34, 80, 131
LpnPI CCDG 2 cut(s) 106, 133
MboII GAAGA 2 cut(s) 22, 169
MmeI TCCRAC 1 cut(s) 90
MnlI CCTC 1 cut(s) 147
MspR9I CCNGG 1 cut(s) 121
MvaI CCWGG 1 cut(s) 121
NlaIII CATG 3 cut(s) 34, 80, 131
NlaIV GGNNCC 1 cut(s) 36
NspI RCATGY 1 cut(s) 131
Psp6I CCWGG 1 cut(s) 119
PspGI CCWGG 1 cut(s) 119
PspN4I GGNNCC 1 cut(s) 36
RsaI GTAC 2 cut(s) 168, 174
RsaNI GTAC 2 cut(s) 167, 173
ScrFI CCNGG 1 cut(s) 121
SetI ASST 3 cut(s) 144, 166, 178
SgeI CNNG 8 cut(s) 43, 73, 89, 132, 133, 140, 182, 196
StyD4I CCNGG 1 cut(s) 119
TaaI ACNGT 1 cut(s) 151
TspDTI ATGAA 4 cut(s) 19, 31, 108, 152
XceI RCATGY 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.