Prupe.4G129100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
7128363 .. 7129354
992 bp
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UTR
Exon/CDS
Intron
Prupe.4G129100.1

Sequence Viewer

Length: 207 bp
ATGGTTCCCAGGGCTAATTACGTGATGAGTCTCTTCATCCTAGTGTTGTTGTTCTCATCCGAAACAACGTTTGCCAGAGTTTCTTATTTTTCAGAAACCAAGGACAACAAAGGTAGCGAGCTTCTGAGGATGAATAATATTAACATGGCAAAGAAAATACGCGGAAATTCAGGCCGAGCTACCGTGCCTTCAGGCATCATCTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

7.57

Weight (kDa)

10.27

Isoelectric Point (pI)

48.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 162
AciI CCGC 1 cut(s) 162
AclI AACGTT 1 cut(s) 68
AcsI RAATTY 1 cut(s) 166
AcuI CTGAAG 1 cut(s) 174
AjnI CCWGG 1 cut(s) 8
AluBI AGCT 2 cut(s) 121, 179
AluI AGCT 2 cut(s) 121, 179
Alw26I GTCTC 1 cut(s) 35
AoxI GGCC 1 cut(s) 172
ApoI RAATTY 1 cut(s) 166
BciT130I CCWGG 1 cut(s) 10
BcoDI GTCTC 1 cut(s) 35
BfaI CTAG 1 cut(s) 41
Bme1390I CCNGG 1 cut(s) 10
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 10
BsaAI YACGTR 1 cut(s) 22
BsaJI CCNNGG 3 cut(s) 8, 9, 99
BseBI CCWGG 1 cut(s) 10
BseDI CCNNGG 3 cut(s) 8, 9, 99
BseGI GGATG 3 cut(s) 36, 56, 135
BseMII CTCAG 1 cut(s) 116
Bsh1236I CGCG 1 cut(s) 162
BshFI GGCC 1 cut(s) 174
BsmAI GTCTC 1 cut(s) 35
BsnI GGCC 1 cut(s) 174
BspACI CCGC 1 cut(s) 162
BspANI GGCC 1 cut(s) 174
BspCNI CTCAG 1 cut(s) 117
BspFNI CGCG 1 cut(s) 162
BspLI GGNNCC 1 cut(s) 6
BssECI CCNNGG 3 cut(s) 8, 9, 99
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 10
Bst4CI ACNGT 1 cut(s) 184
Bst6I CTCTTC 1 cut(s) 38
BstBAI YACGTR 1 cut(s) 22
BstC8I GCNNGC 1 cut(s) 119
BstDEI CTNAG 1 cut(s) 125
BstF5I GGATG 3 cut(s) 36, 56, 135
BstFNI CGCG 1 cut(s) 162
BstMAI GTCTC 1 cut(s) 35
BstNI CCWGG 1 cut(s) 10
BstSCI CCNGG 1 cut(s) 8
BstUI CGCG 1 cut(s) 162
BsuRI GGCC 1 cut(s) 174
BtsCI GGATG 3 cut(s) 36, 56, 135
Cac8I GCNNGC 1 cut(s) 119
CviAII CATG 1 cut(s) 145
CviJI RGCY 4 cut(s) 14, 121, 174, 179
CviKI_1 RGCY 4 cut(s) 14, 121, 174, 179
DdeI CTNAG 1 cut(s) 125
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
Eco130I CCWWGG 1 cut(s) 99
Eco57I CTGAAG 1 cut(s) 174
EcoRII CCWGG 1 cut(s) 8
EcoT14I CCWWGG 1 cut(s) 99
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 1 cut(s) 148
FaiI YATR 2 cut(s) 146, 205
FatI CATG 1 cut(s) 144
FokI GGATG 3 cut(s) 23, 43, 142
FspBI CTAG 1 cut(s) 41
HaeIII GGCC 1 cut(s) 174
Hin1II CATG 1 cut(s) 148
HinfI GANTC 1 cut(s) 28
Hpy188I TCNGA 3 cut(s) 61, 94, 126
HpyAV CCTTC 1 cut(s) 198
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 2 cut(s) 21, 68
HpyF3I CTNAG 1 cut(s) 125
HpySE526I ACGT 2 cut(s) 21, 68
Hsp92II CATG 1 cut(s) 148
LpnPI CCDG 4 cut(s) 22, 88, 156, 177
MaeI CTAG 1 cut(s) 41
MaeII ACGT 2 cut(s) 21, 68
MboII GAAGA 1 cut(s) 25
MluCI AATT 2 cut(s) 16, 166
MlyI GAGTC 1 cut(s) 37
MnlI CCTC 1 cut(s) 120
MseI TTAA 1 cut(s) 141
MslI CAYNNNNRTG 1 cut(s) 41
MspR9I CCNGG 1 cut(s) 10
MvaI CCWGG 1 cut(s) 10
MvnI CGCG 1 cut(s) 162
NlaIII CATG 1 cut(s) 148
NlaIV GGNNCC 1 cut(s) 6
NmeAIII GCCGAG 1 cut(s) 200
PasI CCCWGGG 1 cut(s) 9
PleI GAGTC 1 cut(s) 36
PpsI GAGTC 1 cut(s) 36
Ppu21I YACGTR 1 cut(s) 22
Psp1406I AACGTT 1 cut(s) 68
Psp6I CCWGG 1 cut(s) 8
PspGI CCWGG 1 cut(s) 8
PspN4I GGNNCC 1 cut(s) 6
RseI CAYNNNNRTG 1 cut(s) 41
SaqAI TTAA 1 cut(s) 141
SchI GAGTC 1 cut(s) 37
ScrFI CCNGG 1 cut(s) 10
SetI ASST 5 cut(s) 24, 71, 115, 123, 181
SmiMI CAYNNNNRTG 1 cut(s) 41
Sse9I AATT 2 cut(s) 16, 166
SsiI CCGC 1 cut(s) 162
SspI AATATT 1 cut(s) 139
SspMI CTAG 1 cut(s) 41
StyD4I CCNGG 1 cut(s) 8
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 2 cut(s) 24, 71
TasI AATT 2 cut(s) 16, 166
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
TspDTI ATGAA 2 cut(s) 25, 146
XapI RAATTY 1 cut(s) 166
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.