Rw0G001590

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00045
Physical Location & Seq
Forward (+)
34002 .. 34629
628 bp
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UTR
Exon/CDS
Intron
Rw0G001590.1

Sequence Viewer

Length: 210 bp
ATGGTTCATAAGGCCTGTACTATTTACGTGATTCCCTTGATCCTGTTGCTATTCTTCTTCTCATCCAACGTCGTTTCTGCTGGAATTTCTTACATTCCAATAACCAAAGAGAAAAGGAATCACCATGTGAATATGGATATTATTAAAGGAAGGAAAATAGGCGTACCAGTACCTTCTACACCTGGAGATAGCCATGGTAACGTAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

69

Amino Acids

7.53

Weight (kDa)

9.65

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 34
AcsI RAATTY 1 cut(s) 84
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 3 cut(s) 19, 165, 171
AjnI CCWGG 1 cut(s) 181
AlwI GGATC 1 cut(s) 34
AoxI GGCC 1 cut(s) 12
ApoI RAATTY 1 cut(s) 84
AsuHPI GGTGA 1 cut(s) 113
BciT130I CCWGG 1 cut(s) 183
Bme1390I CCNGG 1 cut(s) 183
BmrFI CCNGG 1 cut(s) 183
BpmI CTGGAG 1 cut(s) 204
BsaAI YACGTR 1 cut(s) 28
BsaJI CCNNGG 1 cut(s) 193
Bse1I ACTGG 1 cut(s) 167
BseBI CCWGG 1 cut(s) 183
BseDI CCNNGG 1 cut(s) 193
BseGI GGATG 1 cut(s) 62
BseNI ACTGG 1 cut(s) 167
BshFI GGCC 1 cut(s) 14
BsnI GGCC 1 cut(s) 14
Bsp143I GATC 1 cut(s) 39
Bsp19I CCATGG 1 cut(s) 193
BspANI GGCC 1 cut(s) 14
BspPI GGATC 1 cut(s) 34
BsrI ACTGG 1 cut(s) 167
BssECI CCNNGG 1 cut(s) 193
BssMI GATC 1 cut(s) 39
BssT1I CCWWGG 1 cut(s) 193
Bst2UI CCWGG 1 cut(s) 183
BstBAI YACGTR 1 cut(s) 28
BstDSI CCRYGG 1 cut(s) 193
BstF5I GGATG 1 cut(s) 62
BstKTI GATC 1 cut(s) 42
BstMBI GATC 1 cut(s) 39
BstNI CCWGG 1 cut(s) 183
BstSCI CCNGG 1 cut(s) 181
BsuRI GGCC 1 cut(s) 14
BtgI CCRYGG 1 cut(s) 193
BtsCI GGATG 1 cut(s) 62
Csp6I GTAC 3 cut(s) 18, 164, 170
CviAII CATG 2 cut(s) 125, 194
CviJI RGCY 2 cut(s) 14, 192
CviKI_1 RGCY 2 cut(s) 14, 192
CviQI GTAC 3 cut(s) 18, 164, 170
DpnI GATC 1 cut(s) 41
DpnII GATC 1 cut(s) 39
DraIII CACNNNGTG 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 193
Eco147I AGGCCT 1 cut(s) 14
EcoRII CCWGG 1 cut(s) 181
EcoT14I CCWWGG 1 cut(s) 193
ErhI CCWWGG 1 cut(s) 193
FaeI CATG 2 cut(s) 128, 197
FaiI YATR 4 cut(s) 9, 126, 134, 195
FatI CATG 2 cut(s) 124, 193
FokI GGATG 1 cut(s) 49
GsuI CTGGAG 1 cut(s) 204
HaeIII GGCC 1 cut(s) 14
Hin1II CATG 2 cut(s) 128, 197
HinfI GANTC 2 cut(s) 31, 118
HphI GGTGA 1 cut(s) 113
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 2 cut(s) 144, 183
HpyCH4IV ACGT 3 cut(s) 27, 69, 201
HpySE526I ACGT 3 cut(s) 27, 69, 201
Hsp92II CATG 2 cut(s) 128, 197
Kzo9I GATC 1 cut(s) 39
LpnPI CCDG 6 cut(s) 28, 56, 66, 168, 180, 195
MaeII ACGT 3 cut(s) 27, 69, 201
MaeIII GTNAC 1 cut(s) 197
MalI GATC 1 cut(s) 41
MboI GATC 1 cut(s) 39
MboII GAAGA 2 cut(s) 46, 49
MluCI AATT 1 cut(s) 84
MmeI TCCRAC 1 cut(s) 90
MseI TTAA 1 cut(s) 144
MspR9I CCNGG 1 cut(s) 183
MvaI CCWGG 1 cut(s) 183
NcoI CCATGG 1 cut(s) 193
NdeII GATC 1 cut(s) 39
NlaIII CATG 2 cut(s) 128, 197
PceI AGGCCT 1 cut(s) 14
PfeI GAWTC 2 cut(s) 31, 118
Ppu21I YACGTR 1 cut(s) 28
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
RsaI GTAC 3 cut(s) 19, 165, 171
RsaNI GTAC 3 cut(s) 18, 164, 170
SaqAI TTAA 1 cut(s) 144
Sau3AI GATC 1 cut(s) 39
ScrFI CCNGG 1 cut(s) 183
SetI ASST 6 cut(s) 30, 72, 175, 184, 204, 208
Sse9I AATT 1 cut(s) 84
SseBI AGGCCT 1 cut(s) 14
StuI AGGCCT 1 cut(s) 14
StyD4I CCNGG 1 cut(s) 181
StyI CCWWGG 1 cut(s) 193
TaiI ACGT 3 cut(s) 30, 72, 204
TasI AATT 1 cut(s) 84
TatI WGTACW 1 cut(s) 17
TfiI GAWTC 2 cut(s) 31, 118
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
XapI RAATTY 1 cut(s) 84
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.