MD05G1237600.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
Physical Location & Seq
Forward (+)
36868367 .. 36869139
773 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1237600.v1.1.491

Sequence Viewer

Length: 228 bp
ATGGTTCACAATCACAAGGCCTGCGGTGTTTACATGATTCCCTTCTTTCTATTGCTATTGTTCTCATCAAAATTAGTCTTTGCCAATGTTTCTGAACATCCAGTACACAGGAAGCTGATGATTAGCAGGTCGCATCTGCAAATGGAGATCAGTTTAGCAAGGAAAGTGCAGTCAATAGACGTACCAATAGGTTCTAAGCCACCTGGAATAGGAAGGGAAGCCCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

76

Amino Acids

8.41

Weight (kDa)

10.01

Isoelectric Point (pI)

58.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 117
AciI CCGC 1 cut(s) 24
AfaI GTAC 2 cut(s) 105, 183
AfiI CCNNNNNNNGG 1 cut(s) 209
AjnI CCWGG 1 cut(s) 202
AluBI AGCT 1 cut(s) 115
AluI AGCT 1 cut(s) 115
AoxI GGCC 1 cut(s) 18
BciT130I CCWGG 1 cut(s) 204
BfuAI ACCTGC 1 cut(s) 117
Bme1390I CCNGG 1 cut(s) 204
BmrFI CCNGG 1 cut(s) 204
BmsI GCATC 1 cut(s) 142
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse1I ACTGG 1 cut(s) 101
BseBI CCWGG 1 cut(s) 204
BseGI GGATG 1 cut(s) 97
BseLI CCNNNNNNNGG 1 cut(s) 209
BseNI ACTGG 1 cut(s) 101
BsgI GTGCAG 1 cut(s) 188
BshFI GGCC 1 cut(s) 20
BslI CCNNNNNNNGG 1 cut(s) 209
BsnI GGCC 1 cut(s) 20
Bsp143I GATC 1 cut(s) 147
BspACI CCGC 1 cut(s) 24
BspANI GGCC 1 cut(s) 20
BspMI ACCTGC 1 cut(s) 117
BsrI ACTGG 1 cut(s) 101
BssMI GATC 1 cut(s) 147
Bst2UI CCWGG 1 cut(s) 204
BstC8I GCNNGC 1 cut(s) 22
BstDEI CTNAG 1 cut(s) 195
BstENI CCTNNNNNAGG 1 cut(s) 207
BstF5I GGATG 1 cut(s) 97
BstKTI GATC 1 cut(s) 150
BstMBI GATC 1 cut(s) 147
BstNI CCWGG 1 cut(s) 204
BstSCI CCNGG 1 cut(s) 202
BsuRI GGCC 1 cut(s) 20
BtsCI GGATG 1 cut(s) 97
BveI ACCTGC 1 cut(s) 117
Cac8I GCNNGC 1 cut(s) 22
Csp6I GTAC 2 cut(s) 104, 182
CviAII CATG 2 cut(s) 34, 225
CviJI RGCY 4 cut(s) 20, 115, 199, 221
CviKI_1 RGCY 4 cut(s) 20, 115, 199, 221
CviQI GTAC 2 cut(s) 104, 182
DdeI CTNAG 1 cut(s) 195
DpnI GATC 1 cut(s) 149
DpnII GATC 1 cut(s) 147
Eco147I AGGCCT 1 cut(s) 20
EcoNI CCTNNNNNAGG 1 cut(s) 207
EcoRII CCWGG 1 cut(s) 202
FaeI CATG 2 cut(s) 37, 228
FaiI YATR 2 cut(s) 35, 226
FatI CATG 2 cut(s) 33, 224
FokI GGATG 1 cut(s) 84
HaeIII GGCC 1 cut(s) 20
Hin1II CATG 2 cut(s) 37, 228
HinfI GANTC 1 cut(s) 37
Hpy166II GTNNAC 3 cut(s) 7, 31, 106
Hpy188I TCNGA 1 cut(s) 94
Hpy8I GTNNAC 3 cut(s) 7, 31, 106
HpyAV CCTTC 2 cut(s) 52, 207
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 2 cut(s) 139, 169
HpyF3I CTNAG 1 cut(s) 195
HpySE526I ACGT 1 cut(s) 180
Hsp92II CATG 2 cut(s) 37, 228
Kzo9I GATC 1 cut(s) 147
LpnPI CCDG 6 cut(s) 34, 94, 112, 114, 189, 216
LweI GCATC 1 cut(s) 142
MaeII ACGT 1 cut(s) 180
MalI GATC 1 cut(s) 149
MboI GATC 1 cut(s) 147
MluCI AATT 1 cut(s) 71
MspR9I CCNGG 1 cut(s) 204
MvaI CCWGG 1 cut(s) 204
NdeII GATC 1 cut(s) 147
NlaIII CATG 2 cut(s) 37, 228
PceI AGGCCT 1 cut(s) 20
PfeI GAWTC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 202
PspGI CCWGG 1 cut(s) 202
PsrI GAACNNNNNNTAC 2 cut(s) 87, 119
RsaI GTAC 2 cut(s) 105, 183
RsaNI GTAC 2 cut(s) 104, 182
Sau3AI GATC 1 cut(s) 147
ScrFI CCNGG 1 cut(s) 204
SetI ASST 5 cut(s) 117, 131, 183, 193, 205
SfaNI GCATC 1 cut(s) 142
SgeI CNNG 9 cut(s) 28, 33, 46, 113, 121, 139, 171, 215, 216
Sse9I AATT 1 cut(s) 71
SseBI AGGCCT 1 cut(s) 20
SsiI CCGC 1 cut(s) 24
StuI AGGCCT 1 cut(s) 20
StyD4I CCNGG 1 cut(s) 202
TaiI ACGT 1 cut(s) 183
TasI AATT 1 cut(s) 71
TatI WGTACW 1 cut(s) 103
TfiI GAWTC 1 cut(s) 37
XagI CCTNNNNNAGG 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.