Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Reverse (-)

17991604 .. 18000671

Gene Structure 9068 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g24960.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGCCAAGGGAACAGACAAATGCTTCATCAGTTGCACCAGACAAGTCAATAGCATCCGATGAGAAGGTTGGTATTGATGAAGACAATGATCCTGATGAGGCAATGGATGAAGAGGTCGAGTATGAGGAAGTTGAGGAAGAAGAAGAAGTAGAAGAAATAGAAGAAGAGGTGGAAGAAGAAGAGGAAGAAGAGGAGGAGGAGGAAGAAGAAGAGGAGGAGGAAGTTGAAGAAGAGGTGGATGATGAAGATGCTAATAATGCTAATACTGCCACTGAAATTGATGTCAAGAACTCAGTGAGCAGTGAAGAGGAGAAGAAAAAACATGCTGAACTTCTTGCCCTTCCTCCACATGGTTCTGAAGTTTACATTGGTGGCATTCCTCATGATGCTACTCAGGATGATTTAAAGGTCTTTTGTGAAGCTGTAGGAGAAGTTACACAGGTACGGATTATGAAGGGAAAAGATTTAGGTGACAGTAAGGGCTTTGCATTTGTGACATTCAGAAACATGGAGATGGCTTCTACTGCTATTGATGAGTTGAATAATACTGAATTTAAGGGCAAAAGAATAAAATGTTCAACATCTAAAGCAAAGCACCGGTTATTCATTGGTAATGTTCCAAGGAGTTGGGGAGAAGAAGATCTGAGGAAGGCTGTGATGAAGGTTGGTCCTGGAGTCACCGGTGTAGAACTGGTCAAGGATATGAAGAACACAAGCAATAACCGGGGCTTTGCTTTCATTGACTACTATAACCATGCATGTGCTGACTATTCAAGGCAGAAAATGATGGACTCAAAATTTAAGCTGGATACTAATGCTCCAACAGTGAGCTGGGCTGATCCTAAAAATGCCGAGTCTTCTGCTGCTTCACAGGTGAAGGCAGTTTATGTGAAGAATTTGCCCAAAACTGTGACCCAAGAACAGTTAAAGAAGCTTTTTGAACACCACGGGAAAATCACGAAAGTGGTTCTGCCAGCTTCAAAATCAGGACAGGAGAGGAATAGAATTGGTTTTGTACATTTTTCCGAGAGGTCAAGTGCTATGAAAGCATTGAAGAACACTGAAAATTATGAACTCGATGGTCAGCTGTTGGAGTGCTCTCTTGCAAGGCCACAGGCAGATCAAAAGTCTGGTGGATCGAATTCCCAGAGGTCAGGGTTGATTGCTAGTTATCCACCACATGCTGTTTATGGTGTGCCTGGGGGTGCCTATGGGGCTCTTGGTGCAGGATATGGTGCTGCAGGTTTTGCACAGCCATTGATGCCTGGACCAGGACCGGCTCCTCCTGGCATGGCAATGATGCCAATGCTTCTGCCTGATGGACGGATCGGATATGTTTTGCAACAACCAGGGCCTCAGCCATACCAACATCCACACCCACACTCACACCCACACCCACACGCGTCGCATCCACATCCGCGAAATAGTGGTCGGGGTGGTGGTGGGAGCGGTAGCAAGAGTAGTGGTAGTTCAAATAAGGGAAGACACCACAATGATGCTGGACATGGGCGCAGATATCACCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071310 GO:0071345 GO:0071346 GO:0071704 GO:0080090 GO:0090304 GO:0097452 GO:1901360 GO:1902369 GO:1902373 GO:1902494 GO:1903311 GO:1903312 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

510

Amino Acids

55.8

Weight (kDa)

5.04

Isoelectric Point (pI)

49.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	121 - 191	6.3e-19	RNA recognition motif
RRM_1	PF00076	201 - 267	7.3e-09	RNA recognition motif
RRM_10	PF22976	293 - 360	5.1e-06	RRM domain
RRM_1	PF00076	295 - 364	3.7e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1232
AccB1I	GGYRCC	1 cut(s)	1205
AccBSI	CCGCTC	1 cut(s)	1449
AccII	CGCG	2 cut(s)	1403, 1420
AciI	CCGC	2 cut(s)	1418, 1449
AclWI	GGATC	4 cut(s)	83, 833, 1144, 1334
AcsI	RAATTY	4 cut(s)	551, 797, 895, 1141
AcuI	CTGAAG	1 cut(s)	378
AfaI	GTAC	2 cut(s)	444, 1017
AfiI	CCNNNNNNNGG	2 cut(s)	350, 1271
AflIII	ACRYGT	1 cut(s)	1401
AgeI	ACCGGT	2 cut(s)	597, 680
AgsI	TTSAA	8 cut(s)	227, 541, 579, 774, 941, 981, 1054, 1473
AjnI	CCWGG	6 cut(s)	670, 1198, 1264, 1270, 1285, 1348
AjuI	GAANNNNNNNTTGG	2 cut(s)	351, 383
AleI	CACNNNNGTG	1 cut(s)	962
AluBI	AGCT	6 cut(s)	422, 805, 831, 934, 977, 1087
AluI	AGCT	6 cut(s)	422, 805, 831, 934, 977, 1087
Alw21I	GWGCWC	1 cut(s)	1100
AlwI	GGATC	4 cut(s)	83, 833, 1144, 1334
AoxI	GGCC	2 cut(s)	1109, 1352
ApeKI	GCWGC	2 cut(s)	863, 1238
ApoI	RAATTY	4 cut(s)	551, 797, 895, 1141
ArsI	GACNNNNNNTTYG	2 cut(s)	1414, 1446
AsiGI	ACCGGT	2 cut(s)	597, 680
AspLEI	GCGC	1 cut(s)	1512
AspS9I	GGNCC	4 cut(s)	668, 1268, 1274, 1352
AsuC2I	CCSGG	1 cut(s)	725
AsuHPI	GGTGA	4 cut(s)	482, 670, 886, 1511
AvaII	GGWCC	3 cut(s)	668, 1268, 1274
BanI	GGYRCC	1 cut(s)	1205
BanII	GRGCYC	1 cut(s)	1219
BbsI	GAAGAC	3 cut(s)	87, 849, 1489
Bbv12I	GWGCWC	1 cut(s)	1100
BbvCI	CCTCAGC	1 cut(s)	1356
BbvI	GCAGC	2 cut(s)	850, 1225
BccI	CCATC	4 cut(s)	508, 781, 1073, 1313
BcgI	CGANNNNNNTGC	2 cut(s)	842, 876
BciT130I	CCWGG	6 cut(s)	672, 1200, 1266, 1272, 1287, 1350
BciVI	GTATCC	1 cut(s)	802
BcnI	CCSGG	1 cut(s)	725
BfaI	CTAG	1 cut(s)	1167
BfmI	CTRYAG	2 cut(s)	423, 1239
BfuAI	ACCTGC	1 cut(s)	1232
BfuI	GTATCC	1 cut(s)	802
BglI	GCCNNNNNGGC	1 cut(s)	1214
BglII	AGATCT	1 cut(s)	640
BisI	GCNGC	2 cut(s)	864, 1239
BlsI	GCNGC	2 cut(s)	865, 1240
Bme1390I	CCNGG	7 cut(s)	672, 725, 1200, 1266, 1272, 1287, 1350
Bme18I	GGWCC	3 cut(s)	668, 1268, 1274
BmgT120I	GGNCC	4 cut(s)	668, 1268, 1274, 1352
BmiI	GGNNCC	2 cut(s)	1207, 1281
BmrFI	CCNGG	7 cut(s)	672, 725, 1200, 1266, 1272, 1287, 1350
BmsI	GCATC	7 cut(s)	62, 238, 376, 1251, 1290, 1417, 1486
BpiI	GAAGAC	3 cut(s)	87, 849, 1489
BpmI	CTGGAG	1 cut(s)	693
Bpu10I	CCTNAGC	1 cut(s)	1356
BpuMI	CCSGG	1 cut(s)	725
BsaJI	CCNNGG	6 cut(s)	5, 620, 724, 946, 1199, 1349
BsaWI	WCCGGW	2 cut(s)	597, 680
BsaXI	ACNNNNNCTCC	2 cut(s)	802, 832
Bsc4I	CCNNNNNNNGG	2 cut(s)	350, 1271
Bse118I	RCCGGY	3 cut(s)	597, 680, 1276
Bse1I	ACTGG	1 cut(s)	696
Bse3DI	GCAATG	2 cut(s)	108, 1302
BseBI	CCWGG	6 cut(s)	672, 1200, 1266, 1272, 1287, 1350
BseDI	CCNNGG	6 cut(s)	5, 620, 724, 946, 1199, 1349
BseGI	GGATG	7 cut(s)	53, 112, 244, 403, 1369, 1408, 1414
BseLI	CCNNNNNNNGG	2 cut(s)	350, 1271
BseMI	GCAATG	2 cut(s)	108, 1302
BseMII	CTCAG	4 cut(s)	306, 407, 635, 1370
BseNI	ACTGG	1 cut(s)	696
BseRI	GAGGAG	7 cut(s)	206, 209, 212, 227, 230, 323, 1272
BseXI	GCAGC	2 cut(s)	850, 1225
BseYI	CCCAGC	1 cut(s)	831
BsgI	GTGCAG	1 cut(s)	1245
Bsh1236I	CGCG	2 cut(s)	1403, 1420
BshFI	GGCC	2 cut(s)	1111, 1354
BshNI	GGYRCC	1 cut(s)	1205
BshTI	ACCGGT	2 cut(s)	597, 680
BsiHKAI	GWGCWC	1 cut(s)	1100
BsiSI	CCGG	4 cut(s)	598, 681, 724, 1277
BslI	CCNNNNNNNGG	2 cut(s)	350, 1271
BsmI	GAATGC	1 cut(s)	375
BsnI	GGCC	2 cut(s)	1111, 1354
Bsp1286I	GDGCHC	2 cut(s)	1100, 1219
Bsp1407I	TGTACA	1 cut(s)	1015
Bsp143I	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
BspACI	CCGC	2 cut(s)	1418, 1449
BspANI	GGCC	2 cut(s)	1111, 1354
BspCNI	CTCAG	4 cut(s)	305, 406, 636, 1369
BspFNI	CGCG	2 cut(s)	1403, 1420
BspHI	TCATGA	1 cut(s)	382
BspLI	GGNNCC	2 cut(s)	1207, 1281
BspMAI	CTGCAG	1 cut(s)	1243
BspMI	ACCTGC	1 cut(s)	1232
BspPI	GGATC	4 cut(s)	83, 833, 1144, 1334
BspT107I	GGYRCC	1 cut(s)	1205
BsrBI	CCGCTC	1 cut(s)	1449
BsrDI	GCAATG	2 cut(s)	108, 1302
BsrFI	RCCGGY	3 cut(s)	597, 680, 1276
BsrGI	TGTACA	1 cut(s)	1015
BsrI	ACTGG	1 cut(s)	696
BssAI	RCCGGY	3 cut(s)	597, 680, 1276
BssECI	CCNNGG	6 cut(s)	5, 620, 724, 946, 1199, 1349
BssMI	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
BssT1I	CCWWGG	2 cut(s)	5, 620
Bst2UI	CCWGG	6 cut(s)	672, 1200, 1266, 1272, 1287, 1350
Bst4CI	ACNGT	4 cut(s)	476, 826, 910, 924
Bst6I	CTCTTC	7 cut(s)	105, 159, 174, 183, 204, 225, 300
BstAPI	GCANNNNNTGC	1 cut(s)	1247
BstAUI	TGTACA	1 cut(s)	1015
BstC8I	GCNNGC	1 cut(s)	975
BstDEI	CTNAG	4 cut(s)	292, 393, 644, 1356
BstDSI	CCRYGG	1 cut(s)	946
BstENI	CCTNNNNNAGG	1 cut(s)	1269
BstF5I	GGATG	7 cut(s)	53, 112, 244, 403, 1369, 1408, 1414
BstFNI	CGCG	2 cut(s)	1403, 1420
BstHHI	GCGC	1 cut(s)	1512
BstKTI	GATC	6 cut(s)	91, 643, 841, 1123, 1139, 1329
BstMBI	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
BstMWI	GCNNNNNNNGC	8 cut(s)	257, 266, 524, 1046, 1214, 1223, 1247, 1261
BstNI	CCWGG	6 cut(s)	672, 1200, 1266, 1272, 1287, 1350
BstNSI	RCATGY	3 cut(s)	326, 762, 1184
BstSCI	CCNGG	7 cut(s)	670, 723, 1198, 1264, 1270, 1285, 1348
BstSFI	CTRYAG	2 cut(s)	423, 1239
BstUI	CGCG	2 cut(s)	1403, 1420
BstV1I	GCAGC	2 cut(s)	850, 1225
BstV2I	GAAGAC	3 cut(s)	87, 849, 1489
BstX2I	RGATCY	1 cut(s)	640
BstXI	CCANNNNNNTGG	1 cut(s)	627
BstYI	RGATCY	1 cut(s)	640
BsuI	GTATCC	1 cut(s)	802
BsuRI	GGCC	2 cut(s)	1111, 1354
BtgI	CCRYGG	1 cut(s)	946
BtsCI	GGATG	7 cut(s)	53, 112, 244, 403, 1369, 1408, 1414
BtsI	GCAGTG	1 cut(s)	307
BtsIMutI	CAGTG	5 cut(s)	270, 300, 307, 831, 1059
BveI	ACCTGC	1 cut(s)	1232
Cac8I	GCNNGC	1 cut(s)	975
CciI	TCATGA	1 cut(s)	382
CfoI	GCGC	1 cut(s)	1512
Cfr10I	RCCGGY	3 cut(s)	597, 680, 1276
Cfr13I	GGNCC	4 cut(s)	668, 1268, 1274, 1352
CseI	GACGC	1 cut(s)	1392
Csp6I	GTAC	2 cut(s)	443, 1016
CspAI	ACCGGT	2 cut(s)	597, 680
CspCI	CAANNNNNGTGG	4 cut(s)	259, 294, 1444, 1479
CviAII	CATG	9 cut(s)	323, 350, 383, 508, 755, 759, 1181, 1291, 1505
CviQI	GTAC	2 cut(s)	443, 1016
DdeI	CTNAG	4 cut(s)	292, 393, 644, 1356
DpnI	GATC	6 cut(s)	90, 642, 840, 1122, 1138, 1328
DpnII	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
DraI	TTTAAA	1 cut(s)	405
Eam1104I	CTCTTC	7 cut(s)	105, 159, 174, 183, 204, 225, 300
EarI	CTCTTC	7 cut(s)	105, 159, 174, 183, 204, 225, 300
Eco130I	CCWWGG	2 cut(s)	5, 620
Eco24I	GRGCYC	1 cut(s)	1219
Eco32I	GATATC	1 cut(s)	1517
Eco47I	GGWCC	3 cut(s)	668, 1268, 1274
Eco57I	CTGAAG	1 cut(s)	378
EcoNI	CCTNNNNNAGG	1 cut(s)	1269
EcoO109I	RGGNCCY	1 cut(s)	1352
EcoRI	GAATTC	1 cut(s)	1141
EcoRII	CCWGG	6 cut(s)	670, 1198, 1264, 1270, 1285, 1348
EcoRV	GATATC	1 cut(s)	1517
EcoT14I	CCWWGG	2 cut(s)	5, 620
EcoT22I	ATGCAT	1 cut(s)	760
EcoT38I	GRGCYC	1 cut(s)	1219
ErhI	CCWWGG	2 cut(s)	5, 620
FaeI	CATG	9 cut(s)	326, 353, 386, 511, 758, 762, 1184, 1294, 1508
FatI	CATG	9 cut(s)	322, 349, 382, 507, 754, 758, 1180, 1290, 1504
Fnu4HI	GCNGC	2 cut(s)	864, 1239
FokI	GGATG	7 cut(s)	40, 119, 251, 410, 1356, 1395, 1401
FriOI	GRGCYC	1 cut(s)	1219
Fsp4HI	GCNGC	2 cut(s)	864, 1239
FspBI	CTAG	1 cut(s)	1167
GlaI	GCGC	1 cut(s)	1511
GluI	GCNGC	2 cut(s)	864, 1239
GsaI	CCCAGC	1 cut(s)	835
GsuI	CTGGAG	1 cut(s)	693
HaeIII	GGCC	2 cut(s)	1111, 1354
HapII	CCGG	4 cut(s)	598, 681, 724, 1277
HgaI	GACGC	1 cut(s)	1392
HhaI	GCGC	1 cut(s)	1512
Hin1II	CATG	9 cut(s)	326, 353, 386, 511, 758, 762, 1184, 1294, 1508
Hin6I	GCGC	1 cut(s)	1510
HinP1I	GCGC	1 cut(s)	1510
HindIII	AAGCTT	1 cut(s)	932
HinfI	GANTC	3 cut(s)	675, 791, 854
HpaII	CCGG	4 cut(s)	598, 681, 724, 1277
HphI	GGTGA	4 cut(s)	482, 670, 886, 1511
Hpy166II	GTNNAC	1 cut(s)	364
Hpy188I	TCNGA	6 cut(s)	58, 358, 503, 645, 1027, 1331
Hpy188III	TCNNGA	6 cut(s)	92, 286, 383, 395, 958, 987
Hpy8I	GTNNAC	1 cut(s)	364
Hpy99I	CGWCG	1 cut(s)	1408
HpyAV	CCTTC	6 cut(s)	58, 350, 448, 643, 655, 871
HpyCH4III	ACNGT	4 cut(s)	476, 826, 910, 924
HpyCH4V	TGCA	8 cut(s)	35, 488, 758, 1106, 1226, 1241, 1250, 1342
HpyF10VI	GCNNNNNNNGC	8 cut(s)	257, 266, 524, 1046, 1214, 1223, 1247, 1261
HpyF3I	CTNAG	4 cut(s)	292, 393, 644, 1356
Hsp92II	CATG	9 cut(s)	326, 353, 386, 511, 758, 762, 1184, 1294, 1508
HspAI	GCGC	1 cut(s)	1510
Kzo9I	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
LmnI	GCTCC	3 cut(s)	823, 1285, 1446
Lsp1109I	GCAGC	2 cut(s)	850, 1225
LweI	GCATC	7 cut(s)	62, 238, 376, 1251, 1290, 1417, 1486
MaeI	CTAG	1 cut(s)	1167
MaeIII	GTNAC	5 cut(s)	433, 470, 493, 676, 910
MalI	GATC	6 cut(s)	90, 642, 840, 1122, 1138, 1328
MbiI	CCGCTC	1 cut(s)	1449
MboI	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
MflI	RGATCY	1 cut(s)	640
MhlI	GDGCHC	2 cut(s)	1100, 1219
MluCI	AATT	7 cut(s)	276, 551, 797, 895, 1005, 1066, 1141
MluI	ACGCGT	1 cut(s)	1401
MlyI	GAGTC	3 cut(s)	684, 785, 863
MmeI	TCCRAC	2 cut(s)	845, 1071
Mph1103I	ATGCAT	1 cut(s)	760
MseI	TTAA	4 cut(s)	404, 555, 801, 926
MslI	CAYNNNNRTG	6 cut(s)	512, 759, 962, 1295, 1491, 1494
MspA1I	CMGCKG	1 cut(s)	1087
MspI	CCGG	4 cut(s)	598, 681, 724, 1277
MspR9I	CCNGG	7 cut(s)	672, 725, 1200, 1266, 1272, 1287, 1350
Mva1269I	GAATGC	1 cut(s)	375
MvaI	CCWGG	6 cut(s)	672, 1200, 1266, 1272, 1287, 1350
MvnI	CGCG	2 cut(s)	1403, 1420
MwoI	GCNNNNNNNGC	8 cut(s)	257, 266, 524, 1046, 1214, 1223, 1247, 1261
NciI	CCSGG	1 cut(s)	725
NdeII	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
NlaIII	CATG	9 cut(s)	326, 353, 386, 511, 758, 762, 1184, 1294, 1508
NlaIV	GGNNCC	2 cut(s)	1207, 1281
NmeAIII	GCCGAG	1 cut(s)	877
NmuCI	GTSAC	4 cut(s)	470, 493, 676, 910
NsiI	ATGCAT	1 cut(s)	760
NspI	RCATGY	3 cut(s)	326, 762, 1184
OliI	CACNNNNGTG	1 cut(s)	962
PagI	TCATGA	1 cut(s)	382
PctI	GAATGC	1 cut(s)	375
PfoI	TCCNGGA	1 cut(s)	670
PinAI	ACCGGT	2 cut(s)	597, 680
PkrI	GCNGC	2 cut(s)	865, 1240
PleI	GAGTC	3 cut(s)	683, 785, 862
PpsI	GAGTC	3 cut(s)	683, 785, 862
Psp6I	CCWGG	6 cut(s)	670, 1198, 1264, 1270, 1285, 1348
PspFI	CCCAGC	1 cut(s)	831
PspGI	CCWGG	6 cut(s)	670, 1198, 1264, 1270, 1285, 1348
PspN4I	GGNNCC	2 cut(s)	1207, 1281
PspPI	GGNCC	4 cut(s)	668, 1268, 1274, 1352
PsrI	GAACNNNNNNTAC	2 cut(s)	1453, 1485
PstI	CTGCAG	1 cut(s)	1243
PsuI	RGATCY	1 cut(s)	640
PvuII	CAGCTG	1 cut(s)	1087
RsaI	GTAC	2 cut(s)	444, 1017
RsaNI	GTAC	2 cut(s)	443, 1016
RseI	CAYNNNNRTG	6 cut(s)	512, 759, 962, 1295, 1491, 1494
SaqAI	TTAA	4 cut(s)	404, 555, 801, 926
SatI	GCNGC	2 cut(s)	864, 1239
Sau3AI	GATC	6 cut(s)	88, 640, 838, 1120, 1136, 1326
Sau96I	GGNCC	4 cut(s)	668, 1268, 1274, 1352
SchI	GAGTC	3 cut(s)	684, 785, 863
ScrFI	CCNGG	7 cut(s)	672, 725, 1200, 1266, 1272, 1287, 1350
SduI	GDGCHC	2 cut(s)	1100, 1219
SfaNI	GCATC	7 cut(s)	62, 238, 376, 1251, 1290, 1417, 1486
SfcI	CTRYAG	2 cut(s)	423, 1239
SgrAI	CRCCGGYG	1 cut(s)	680
SinI	GGWCC	3 cut(s)	668, 1268, 1274
SmiMI	CAYNNNNRTG	6 cut(s)	512, 759, 962, 1295, 1491, 1494
Sse9I	AATT	7 cut(s)	276, 551, 797, 895, 1005, 1066, 1141
SsiI	CCGC	2 cut(s)	1418, 1449
SspMI	CTAG	1 cut(s)	1167
StyD4I	CCNGG	7 cut(s)	670, 723, 1198, 1264, 1270, 1285, 1348
StyI	CCWWGG	2 cut(s)	5, 620
TaaI	ACNGT	4 cut(s)	476, 826, 910, 924
TaqI	TCGA	3 cut(s)	117, 1077, 1139
TasI	AATT	7 cut(s)	276, 551, 797, 895, 1005, 1066, 1141
TatI	WGTACW	1 cut(s)	1015
Tru1I	TTAA	4 cut(s)	404, 555, 801, 926
Tru9I	TTAA	4 cut(s)	404, 555, 801, 926
TscAI	CASTG	5 cut(s)	277, 300, 307, 831, 1066
TseFI	GTSAC	4 cut(s)	470, 493, 676, 910
TseI	GCWGC	2 cut(s)	863, 1238
Tsp45I	GTSAC	4 cut(s)	470, 493, 676, 910
TspGWI	ACGGA	2 cut(s)	460, 1339
TspRI	CASTG	5 cut(s)	277, 300, 307, 831, 1066
VpaK11BI	GGWCC	3 cut(s)	668, 1268, 1274
XagI	CCTNNNNNAGG	1 cut(s)	1269
XapI	RAATTY	4 cut(s)	551, 797, 895, 1141
XceI	RCATGY	3 cut(s)	326, 762, 1184
XcmI	CCANNNNNNNNNTGG	2 cut(s)	828, 1496
XspI	CTAG	1 cut(s)	1167
Zsp2I	ATGCAT	1 cut(s)	760

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.