Prupe.6G130600_v2.0.a1
BZIP Family

Heterogeneous nuclear ribonucleoprotein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
10160973 .. 10167677
6705 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G130600.2

Sequence Viewer

Length: 1491 bp
ATGCCAAGGGCAAAAGCAAATGCTTCATCACTTGATAAACCAGTTGAACCCGAAAAGCCAATAGAGTCCGATGAGAAGGTTGATCTTGATGGTGACAATGACCCTGAGGAGGCAATGGATGAAGAGGTTGAGTATGAAGAAGTAGAGGAAGAAATAGAAGAAGAGGTGGAAGAAGAAGAGGAAGAAGAAGAAGTGGAGGAGGTGGAAGAAGAGGTAGAGGATGAAGATTCTAATCATGCCACTGGAACTGATGTTGGGAAATCCCATAGCAGTGATGAGGTGATGTCTGATGATGAGGATGAGAAGAAAAAGCATGCTGGACTTCTTGCCCTTCCTCCACATGGTTCAGAAGTTTATATTGGTGGCATTCCTCATGATGCTTCTCAAGAGGATTTAAAGGTTTTTTGTGAGGCTGTAGGAAAGGTTACGGAGGTTCGGATTATGAAGGGCAAAGATTCGGGTGAGAATAAGGGCTTTGCATTTGTGACATTCAAAAACGTGGAAATGGCTTCTGATGCCATTGAGGAATTGAATAATACTGAATTTAAGGGTAAAAGAATAAAGTGTTCAACATCTAAAGCAAAGCACCGTTTGTTCATTGGTAATGTTCCAAGGAGCTGGGGAGAAGAAGATCTGAGGAAAGTTGTGATGAAGATTGGTCCTGGAGTTACTGGTGTAGAACTGGTCAAGGATATGAAGAACACAAGCAATAACCGAGGCTTTGCTTTCGTTGACTACTATAACCACGCATGTGCTGACTATTCAAGGCAGAAAATGGTGGACCCAAAATTTAAGCTAGATAACAATGCTCCAACAGTGAGCTGGGCAGATCCTAAAAATGCCGAGTCGTCTGCTGCTTCTCAGGTGAAGGCAGTTTATGTAAAGAATTTACCCCAAAATGTGACACAAGACCATTTAAAGGAGCTATTTGAACACCATGGGAAAATCACGAAAGTGGTTCTGCCAGCTGCAAAATCTGGACAGGAACAGAGTAGAATTGGTTTTGTACATTTTGCAGAGAGGTCCAGTGCCATGAAAGCATTGAAGAACACTGAAAATTATGAACTTGACGGCCAGCTGTTGGAGTGTTCTCTTGCAAGGCCACAGGCAGATCAAAAGTCTGGTGGATCAAACTCGCATAGGTCAGGGTTGCTTCCTAGTTATCCACCTCGTGTTGTTTATGGTATGGCTGGGGGTGCCTATGGTGCTCTTGGTGCAGGGTATGGTGCTGCAGGTTTTGCACAGCCTTTGATGTCTGGACCTGGACCGGCTCCTGCAGGCATGGGAATGATGCCAATGCTTCTACCTGATGGACGGATTGGATATGTTCTGCAACAACCAGGTGCACAGCCACACCCCTCACCTTCGCATCAAAGAAGTAGTAGCAGGGGTGGTGGTCGGAGCGGAAGCAGTAGCAGAAGTAGTGGTGGTCCAAACAAGGGTAGGTACAGCAATGATACTGGGCATGGACGCAGGTATAACCCGTATTGA

Protein Analysis

497

Amino Acids

54.02

Weight (kDa)

5.06

Isoelectric Point (pI)

52.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1223, 1464
AccB1I GGYRCC 1 cut(s) 1196
AccB7I CCANNNNNTGG 1 cut(s) 1081
AccBSI CCGCTC 1 cut(s) 1404
AciI CCGC 1 cut(s) 1404
AclWI GGATC 2 cut(s) 824, 1135
AcoI YGGCCR 1 cut(s) 1072
AcsI RAATTY 3 cut(s) 542, 788, 886
AdeI CACNNNGTG 1 cut(s) 1172
AfaI GTAC 2 cut(s) 1008, 1448
AfiI CCNNNNNNNGG 5 cut(s) 109, 341, 919, 1081, 1439
AgsI TTSAA 7 cut(s) 47, 493, 532, 570, 765, 932, 1045
AjnI CCWGG 3 cut(s) 661, 1261, 1339
AjuI GAANNNNNNNTTGG 2 cut(s) 342, 374
AleI CACNNNNGTG 2 cut(s) 750, 953
AluBI AGCT 6 cut(s) 618, 796, 822, 925, 968, 1078
AluI AGCT 6 cut(s) 618, 796, 822, 925, 968, 1078
Alw21I GWGCWC 2 cut(s) 1210, 1348
Alw44I GTGCAC 1 cut(s) 1344
AlwI GGATC 2 cut(s) 824, 1135
AoxI GGCC 2 cut(s) 1072, 1100
ApaLI GTGCAC 1 cut(s) 1344
ApeKI GCWGC 3 cut(s) 854, 968, 1229
ApoI RAATTY 3 cut(s) 542, 788, 886
AspS9I GGNCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
AsuHPI GGTGA 5 cut(s) 104, 292, 473, 877, 1353
AvaII GGWCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
AxyI CCTNAGG 1 cut(s) 105
BaeGI GKGCMC 1 cut(s) 1348
BanI GGYRCC 1 cut(s) 1196
BauI CACGAG 1 cut(s) 1170
Bbv12I GWGCWC 2 cut(s) 1210, 1348
BbvI GCAGC 3 cut(s) 841, 955, 1216
BccI CCATC 2 cut(s) 83, 1304
BceAI ACGGC 1 cut(s) 1087
BcgI CGANNNNNNTGC 2 cut(s) 833, 867
BciT130I CCWGG 3 cut(s) 663, 1263, 1341
BfaI CTAG 2 cut(s) 797, 1158
BfmI CTRYAG 3 cut(s) 414, 1230, 1275
BfuAI ACCTGC 2 cut(s) 1223, 1464
BglII AGATCT 1 cut(s) 631
BisI GCNGC 3 cut(s) 855, 969, 1230
BlsI GCNGC 3 cut(s) 856, 970, 1231
Bme1390I CCNGG 3 cut(s) 663, 1263, 1341
Bme18I GGWCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
BmgT120I GGNCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
BmiI GGNNCC 3 cut(s) 783, 1198, 1272
BmrFI CCNGG 3 cut(s) 663, 1263, 1341
BmrI ACTGGG 1 cut(s) 1470
BmsI GCATC 4 cut(s) 367, 505, 1281, 1378
BmuI ACTGGG 1 cut(s) 1470
BpmI CTGGAG 1 cut(s) 684
BpuEI CTTGAG 1 cut(s) 369
BsaBI GATNNNNATC 1 cut(s) 231
BsaJI CCNNGG 4 cut(s) 5, 611, 715, 937
Bsc4I CCNNNNNNNGG 5 cut(s) 109, 341, 919, 1081, 1439
Bse118I RCCGGY 1 cut(s) 1267
Bse1I ACTGG 6 cut(s) 41, 247, 676, 687, 1026, 1465
Bse21I CCTNAGG 1 cut(s) 105
Bse3DI GCAATG 2 cut(s) 120, 1459
Bse8I GATNNNNATC 1 cut(s) 231
BseBI CCWGG 3 cut(s) 663, 1263, 1341
BseDI CCNNGG 4 cut(s) 5, 611, 715, 937
BseGI GGATG 3 cut(s) 124, 226, 304
BseJI GATNNNNATC 1 cut(s) 231
BseLI CCNNNNNNNGG 5 cut(s) 109, 341, 919, 1081, 1439
BseMI GCAATG 2 cut(s) 120, 1459
BseMII CTCAG 3 cut(s) 96, 626, 875
BseNI ACTGG 6 cut(s) 41, 247, 676, 687, 1026, 1465
BseRI GAGGAG 2 cut(s) 122, 212
BseSI GKGCMC 1 cut(s) 1348
BseXI GCAGC 3 cut(s) 841, 955, 1216
BseYI CCCAGC 3 cut(s) 618, 822, 1190
BsgI GTGCAG 1 cut(s) 1236
BshFI GGCC 2 cut(s) 1074, 1102
BshNI GGYRCC 1 cut(s) 1196
BsiHKAI GWGCWC 2 cut(s) 1210, 1348
BsiSI CCGG 1 cut(s) 1268
BslI CCNNNNNNNGG 5 cut(s) 109, 341, 919, 1081, 1439
BsmI GAATGC 1 cut(s) 366
BsnI GGCC 2 cut(s) 1074, 1102
Bsp1286I GDGCHC 2 cut(s) 1210, 1348
Bsp1407I TGTACA 1 cut(s) 1006
Bsp143I GATC 5 cut(s) 82, 631, 829, 1111, 1127
Bsp19I CCATGG 1 cut(s) 937
BspACI CCGC 1 cut(s) 1404
BspANI GGCC 2 cut(s) 1074, 1102
BspCNI CTCAG 3 cut(s) 97, 627, 874
BspHI TCATGA 1 cut(s) 373
BspLI GGNNCC 3 cut(s) 783, 1198, 1272
BspMAI CTGCAG 2 cut(s) 1234, 1279
BspMI ACCTGC 2 cut(s) 1223, 1464
BspPI GGATC 2 cut(s) 824, 1135
BspT107I GGYRCC 1 cut(s) 1196
BsrBI CCGCTC 1 cut(s) 1404
BsrDI GCAATG 2 cut(s) 120, 1459
BsrFI RCCGGY 1 cut(s) 1267
BsrGI TGTACA 1 cut(s) 1006
BsrI ACTGG 6 cut(s) 41, 247, 676, 687, 1026, 1465
BssAI RCCGGY 1 cut(s) 1267
BssECI CCNNGG 4 cut(s) 5, 611, 715, 937
BssMI GATC 5 cut(s) 82, 631, 829, 1111, 1127
BssSI CACGAG 1 cut(s) 1170
BssT1I CCWWGG 3 cut(s) 5, 611, 937
Bst2BI CACGAG 1 cut(s) 1170
Bst2UI CCWGG 3 cut(s) 663, 1263, 1341
Bst4CI ACNGT 2 cut(s) 590, 817
Bst6I CTCTTC 4 cut(s) 117, 156, 171, 204
BstAPI GCANNNNNTGC 1 cut(s) 1238
BstAUI TGTACA 1 cut(s) 1006
BstC8I GCNNGC 4 cut(s) 315, 966, 1076, 1279
BstDEI CTNAG 3 cut(s) 105, 635, 861
BstDSI CCRYGG 1 cut(s) 937
BstF5I GGATG 3 cut(s) 124, 226, 304
BstKTI GATC 5 cut(s) 85, 634, 832, 1114, 1130
BstMBI GATC 5 cut(s) 82, 631, 829, 1111, 1127
BstMWI GCNNNNNNNGC 6 cut(s) 515, 1037, 1196, 1205, 1214, 1238
BstNI CCWGG 3 cut(s) 663, 1263, 1341
BstNSI RCATGY 2 cut(s) 317, 753
BstSCI CCNGG 3 cut(s) 661, 1261, 1339
BstSFI CTRYAG 3 cut(s) 414, 1230, 1275
BstSLI GKGCMC 1 cut(s) 1348
BstV1I GCAGC 3 cut(s) 841, 955, 1216
BstX2I RGATCY 2 cut(s) 631, 829
BstXI CCANNNNNNTGG 1 cut(s) 618
BstYI RGATCY 2 cut(s) 631, 829
Bsu36I CCTNAGG 1 cut(s) 105
BsuRI GGCC 2 cut(s) 1074, 1102
BtgI CCRYGG 1 cut(s) 937
BtsCI GGATG 3 cut(s) 124, 226, 304
BtsI GCAGTG 1 cut(s) 277
BtsIMutI CAGTG 5 cut(s) 240, 277, 822, 1033, 1050
BveI ACCTGC 2 cut(s) 1223, 1464
Cac8I GCNNGC 4 cut(s) 315, 966, 1076, 1279
CciI TCATGA 1 cut(s) 373
Cfr10I RCCGGY 1 cut(s) 1267
Cfr13I GGNCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
CseI GACGC 1 cut(s) 1479
CsiI ACCWGGT 1 cut(s) 1339
Csp6I GTAC 2 cut(s) 1007, 1447
CviAII CATG 9 cut(s) 236, 314, 341, 374, 750, 938, 1033, 1282, 1466
CviQI GTAC 2 cut(s) 1007, 1447
DdeI CTNAG 3 cut(s) 105, 635, 861
DpnI GATC 5 cut(s) 84, 633, 831, 1113, 1129
DpnII GATC 5 cut(s) 82, 631, 829, 1111, 1127
DraI TTTAAA 2 cut(s) 396, 918
DraIII CACNNNGTG 1 cut(s) 1172
EaeI YGGCCR 1 cut(s) 1072
Eam1104I CTCTTC 4 cut(s) 117, 156, 171, 204
EarI CTCTTC 4 cut(s) 117, 156, 171, 204
Eco130I CCWWGG 3 cut(s) 5, 611, 937
Eco47I GGWCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
Eco81I CCTNAGG 1 cut(s) 105
EcoRII CCWGG 3 cut(s) 661, 1261, 1339
EcoT14I CCWWGG 3 cut(s) 5, 611, 937
ErhI CCWWGG 3 cut(s) 5, 611, 937
FaeI CATG 9 cut(s) 239, 317, 344, 377, 753, 941, 1036, 1285, 1469
FatI CATG 9 cut(s) 235, 313, 340, 373, 749, 937, 1032, 1281, 1465
Fnu4HI GCNGC 3 cut(s) 855, 969, 1230
FokI GGATG 3 cut(s) 131, 233, 311
Fsp4HI GCNGC 3 cut(s) 855, 969, 1230
FspBI CTAG 2 cut(s) 797, 1158
GluI GCNGC 3 cut(s) 855, 969, 1230
GsaI CCCAGC 3 cut(s) 622, 826, 1194
GsuI CTGGAG 1 cut(s) 684
HaeIII GGCC 2 cut(s) 1074, 1102
HapII CCGG 1 cut(s) 1268
HgaI GACGC 1 cut(s) 1479
Hin1II CATG 9 cut(s) 239, 317, 344, 377, 753, 941, 1036, 1285, 1469
HincII GTYRAC 1 cut(s) 733
HindII GTYRAC 1 cut(s) 733
HinfI GANTC 4 cut(s) 65, 227, 455, 845
HpaII CCGG 1 cut(s) 1268
HphI GGTGA 5 cut(s) 104, 292, 473, 877, 1353
Hpy166II GTNNAC 3 cut(s) 733, 781, 1346
Hpy188I TCNGA 7 cut(s) 70, 289, 349, 438, 514, 636, 1401
Hpy188III TCNNGA 6 cut(s) 86, 374, 386, 949, 978, 1257
Hpy8I GTNNAC 3 cut(s) 733, 781, 1346
HpyAV CCTTC 5 cut(s) 70, 341, 439, 862, 1374
HpyCH4III ACNGT 2 cut(s) 590, 817
HpyCH4IV ACGT 1 cut(s) 498
HpyF10VI GCNNNNNNNGC 6 cut(s) 515, 1037, 1196, 1205, 1214, 1238
HpyF3I CTNAG 3 cut(s) 105, 635, 861
HpySE526I ACGT 1 cut(s) 498
Hsp92II CATG 9 cut(s) 239, 317, 344, 377, 753, 941, 1036, 1285, 1469
Kzo9I GATC 5 cut(s) 82, 631, 829, 1111, 1127
LmnI GCTCC 5 cut(s) 615, 814, 922, 1276, 1401
Lsp1109I GCAGC 3 cut(s) 841, 955, 1216
LweI GCATC 4 cut(s) 367, 505, 1281, 1378
MabI ACCWGGT 1 cut(s) 1339
MaeI CTAG 2 cut(s) 797, 1158
MaeII ACGT 1 cut(s) 498
MaeIII GTNAC 5 cut(s) 92, 424, 484, 667, 901
MalI GATC 5 cut(s) 84, 633, 831, 1113, 1129
MbiI CCGCTC 1 cut(s) 1404
MboI GATC 5 cut(s) 82, 631, 829, 1111, 1127
MflI RGATCY 2 cut(s) 631, 829
MhlI GDGCHC 2 cut(s) 1210, 1348
MluCI AATT 6 cut(s) 527, 542, 788, 886, 996, 1057
MlyI GAGTC 2 cut(s) 74, 854
MmeI TCCRAC 3 cut(s) 836, 1062, 1379
MseI TTAA 4 cut(s) 395, 546, 792, 917
MslI CAYNNNNRTG 4 cut(s) 270, 750, 953, 1286
MspA1I CMGCKG 2 cut(s) 968, 1078
MspI CCGG 1 cut(s) 1268
MspR9I CCNGG 3 cut(s) 663, 1263, 1341
Mva1269I GAATGC 1 cut(s) 366
MvaI CCWGG 3 cut(s) 663, 1263, 1341
MwoI GCNNNNNNNGC 6 cut(s) 515, 1037, 1196, 1205, 1214, 1238
NcoI CCATGG 1 cut(s) 937
NdeII GATC 5 cut(s) 82, 631, 829, 1111, 1127
NlaIII CATG 9 cut(s) 239, 317, 344, 377, 753, 941, 1036, 1285, 1469
NlaIV GGNNCC 3 cut(s) 783, 1198, 1272
NmeAIII GCCGAG 1 cut(s) 868
NmuCI GTSAC 3 cut(s) 92, 484, 901
NspI RCATGY 2 cut(s) 317, 753
OliI CACNNNNGTG 2 cut(s) 750, 953
PaeI GCATGC 1 cut(s) 317
PagI TCATGA 1 cut(s) 373
PctI GAATGC 1 cut(s) 366
PfeI GAWTC 2 cut(s) 227, 455
PflMI CCANNNNNTGG 1 cut(s) 1081
PfoI TCCNGGA 1 cut(s) 661
PkrI GCNGC 3 cut(s) 856, 970, 1231
PleI GAGTC 2 cut(s) 73, 853
PpsI GAGTC 2 cut(s) 73, 853
Psp6I CCWGG 3 cut(s) 661, 1261, 1339
PspFI CCCAGC 3 cut(s) 618, 822, 1190
PspGI CCWGG 3 cut(s) 661, 1261, 1339
PspN4I GGNNCC 3 cut(s) 783, 1198, 1272
PspPI GGNCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
PstI CTGCAG 2 cut(s) 1234, 1279
PsuI RGATCY 2 cut(s) 631, 829
PvuII CAGCTG 2 cut(s) 968, 1078
RsaI GTAC 2 cut(s) 1008, 1448
RsaNI GTAC 2 cut(s) 1007, 1447
RseI CAYNNNNRTG 4 cut(s) 270, 750, 953, 1286
SaqAI TTAA 4 cut(s) 395, 546, 792, 917
SatI GCNGC 3 cut(s) 855, 969, 1230
Sau3AI GATC 5 cut(s) 82, 631, 829, 1111, 1127
Sau96I GGNCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
SbfI CCTGCAGG 1 cut(s) 1279
SchI GAGTC 2 cut(s) 74, 854
ScrFI CCNGG 3 cut(s) 663, 1263, 1341
SdaI CCTGCAGG 1 cut(s) 1279
SduI GDGCHC 2 cut(s) 1210, 1348
SexAI ACCWGGT 1 cut(s) 1339
SfaNI GCATC 4 cut(s) 367, 505, 1281, 1378
SfcI CTRYAG 3 cut(s) 414, 1230, 1275
SinI GGWCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
SmiMI CAYNNNNRTG 4 cut(s) 270, 750, 953, 1286
SmlI CTYRAG 1 cut(s) 384
SmoI CTYRAG 1 cut(s) 384
SphI GCATGC 1 cut(s) 317
Sse8387I CCTGCAGG 1 cut(s) 1279
Sse9I AATT 6 cut(s) 527, 542, 788, 886, 996, 1057
SsiI CCGC 1 cut(s) 1404
SspMI CTAG 2 cut(s) 797, 1158
StyD4I CCNGG 3 cut(s) 661, 1261, 1339
StyI CCWWGG 3 cut(s) 5, 611, 937
TaaI ACNGT 2 cut(s) 590, 817
TaiI ACGT 1 cut(s) 501
TasI AATT 6 cut(s) 527, 542, 788, 886, 996, 1057
TatI WGTACW 1 cut(s) 1006
TfiI GAWTC 2 cut(s) 227, 455
Tru1I TTAA 4 cut(s) 395, 546, 792, 917
Tru9I TTAA 4 cut(s) 395, 546, 792, 917
TscAI CASTG 5 cut(s) 247, 277, 822, 1033, 1057
TseFI GTSAC 3 cut(s) 92, 484, 901
TseI GCWGC 3 cut(s) 854, 968, 1229
Tsp45I GTSAC 3 cut(s) 92, 484, 901
TspGWI ACGGA 2 cut(s) 443, 1330
TspRI CASTG 5 cut(s) 247, 277, 822, 1033, 1057
Van91I CCANNNNNTGG 1 cut(s) 1081
VneI GTGCAC 1 cut(s) 1344
VpaK11BI GGWCC 6 cut(s) 659, 781, 1023, 1259, 1265, 1430
XapI RAATTY 3 cut(s) 542, 788, 886
XceI RCATGY 2 cut(s) 317, 753
XcmI CCANNNNNNNNNTGG 1 cut(s) 819
XspI CTAG 2 cut(s) 797, 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.