Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Reverse (-)

16980200 .. 16987093

Gene Structure 6894 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1164700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGAGAGGGTTGATCTTGATGGAGATAATGATCCTGATGAGGCAACAGATGAAGAGAGGTAGAGGAAGAGATGAAGAGGGGGAGGAGGTGGAAGAAGAGGTGGAGGATGAAGATTCTAATAATCCGACTGGAACTGATATCCAGAAATCTCAGAGTAGGTCTGGAGATGAGGACGAGAAGAAAAAGCATGCTGAATTTCTTGCCCTTCCACCACATGGTTCTGAAGTTTATATTGGTGGCATTCCTCATGATGCTTCTCAAGAGGATTTAAAGGCTTTTTGTGAGGCTGTGGGAAAAGTAATAGAGGTTCGGATTATGAGAGCCAAAGATTCAGGTGAGAACAAGGGCTTTGCATTTGTTACATTCAAAAACATGGAAATGGCTTCTGATGCCATCAATGAGTTGAATAACACTGAATTTAAGGGTAGAAGAATTAAATGTTCGACATCTAAAGCAAAGAACCGTTTATTCATTGGTAATGTTCCTAGGAGCTGGGGAGAAGATGATCTAAGGAAGGTTGTGCAGAAGATTGGGCCCGGAGTTAATGTTATAGAGCTGGTCAAGGATATGAAGAACACAGGCAACAACCGAGGCTTTGCTTTTGTCGACTACTATAACCATGCCTGTGCTGACTATTCAAGGCAGAAGATGACGGACCCAAAATTTAAGCTAGAAAATAATGCTCCCACAGTGAGTTGGGCTGACCCTAAAAATGACGAGTCTTCTACTTCTCAGGTGAAGGCAGTTTATGTGAAGAATTTACCTAAAAATGTGACCCAAGACCAGTTAAAGGAGCTATTTGAACACCACGGGAAAATCACAAAAGTTGTTCTGCCAGCTGCAAAATCCGGACAGGAAAATAGTAGAATTGGTTTTGTACATTTTGCAGAGAGGTCAAGTGCTATGAAAGCATTGAAGAACACTGAAAACTATGAACTTGATGGCCAGCTGTTGGAGTGCTCTCTTGCAAGGCCACAGGCAGACCAGAAGTCTGGTGGATCAAATTCACAGAGGTCAGGGTTGCTTCCTAGTTATCCTCCTCGTTTTGTTGGTATGGCTGGTGGTGCCTATGGTGGTATTGGTGCAGGGTATGGTGCTGCAGGTTTTCCACAGCCCTTGATGTCTGGACCGGGACCAGTTCCTGCTGGCATGGCAATGATGCCGATTCTTCTACCTGATGGACGGATTGGATACGTTATGCAACAACCGGGTGTGCAGCCACACCCCTCGCCATCATATCAAAGTAGTGGCTGGGGTAATGGTGGGAGCGGTAACAGAAGTAGTGGAAGTTCGAATAAGGGTAGGCACGTCAATGATTCTGGGCATGGACGCAGGTATAACCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071310 GO:0071345 GO:0071346 GO:0071704 GO:0080090 GO:0090304 GO:0097452 GO:1901360 GO:1902369 GO:1902373 GO:1902494 GO:1903311 GO:1903312 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

450

Amino Acids

49.17

Weight (kDa)

8.43

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	76 - 146	3.1e-20	RNA recognition motif
RRM_1	PF00076	156 - 219	2.4e-10	RNA recognition motif
RRM_10	PF22976	247 - 314	5.3e-06	RRM domain
RRM_1	PF00076	249 - 318	5e-16	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1091, 1323
AccB1I	GGYRCC	1 cut(s)	1064
AccB7I	CCANNNNNTGG	2 cut(s)	215, 952
AccBSI	CCGCTC	1 cut(s)	1269
AccI	GTMKAC	1 cut(s)	606
AccIII	TCCGGA	1 cut(s)	848
AciI	CCGC	1 cut(s)	1269
AclWI	GGATC	2 cut(s)	25, 1006
AcoI	YGGCCR	1 cut(s)	943
AcsI	RAATTY	5 cut(s)	194, 416, 662, 757, 1003
AcuI	CTGAAG	1 cut(s)	243
AfaI	GTAC	1 cut(s)	879
AfiI	CCNNNNNNNGG	3 cut(s)	215, 790, 952
AgsI	TTSAA	5 cut(s)	367, 406, 639, 803, 916
AhdI	GACNNNNNGTC	1 cut(s)	988
AjiI	CACGTC	1 cut(s)	1309
AjuI	GAANNNNNNNTTGG	2 cut(s)	216, 248
AluBI	AGCT	6 cut(s)	492, 556, 670, 796, 839, 949
AluI	AGCT	6 cut(s)	492, 556, 670, 796, 839, 949
Alw21I	GWGCWC	1 cut(s)	962
AlwI	GGATC	2 cut(s)	25, 1006
AlwNI	CAGNNNCTG	1 cut(s)	1142
Aor13HI	TCCGGA	1 cut(s)	848
AoxI	GGCC	3 cut(s)	533, 943, 971
ApaI	GGGCCC	1 cut(s)	537
ApeKI	GCWGC	3 cut(s)	839, 1097, 1216
ApoI	RAATTY	5 cut(s)	194, 416, 662, 757, 1003
AspA2I	CCTAGG	1 cut(s)	485
AspS9I	GGNCC	5 cut(s)	533, 534, 655, 1127, 1133
AsuC2I	CCSGG	3 cut(s)	537, 1131, 1209
AsuHPI	GGTGA	2 cut(s)	347, 748
AsuII	TTCGAA	1 cut(s)	1292
AvaII	GGWCC	3 cut(s)	655, 1127, 1133
AvrII	CCTAGG	1 cut(s)	485
BaeGI	GKGCMC	1 cut(s)	537
BalI	TGGCCA	1 cut(s)	945
BanI	GGYRCC	1 cut(s)	1064
BanII	GRGCYC	1 cut(s)	537
BbsI	GAAGAC	1 cut(s)	714
Bbv12I	GWGCWC	1 cut(s)	962
BbvI	GCAGC	3 cut(s)	826, 1084, 1228
BccI	CCATC	5 cut(s)	13, 401, 935, 1172, 1240
BciVI	GTATCC	1 cut(s)	1184
BcnI	CCSGG	3 cut(s)	537, 1131, 1209
BfaI	CTAG	3 cut(s)	486, 671, 1029
BfmI	CTRYAG	1 cut(s)	1098
BfuAI	ACCTGC	2 cut(s)	1091, 1323
BfuI	GTATCC	1 cut(s)	1184
BisI	GCNGC	3 cut(s)	840, 1098, 1217
BlnI	CCTAGG	1 cut(s)	485
BlsI	GCNGC	3 cut(s)	841, 1099, 1218
Bme1390I	CCNGG	3 cut(s)	537, 1131, 1209
Bme18I	GGWCC	3 cut(s)	655, 1127, 1133
BmeRI	GACNNNNNGTC	1 cut(s)	988
BmgBI	CACGTC	1 cut(s)	1309
BmgT120I	GGNCC	5 cut(s)	533, 534, 655, 1127, 1133
BmiI	GGNNCC	4 cut(s)	535, 657, 1066, 1134
BmrFI	CCNGG	3 cut(s)	537, 1131, 1209
BmsI	GCATC	3 cut(s)	241, 379, 1149
BpiI	GAAGAC	1 cut(s)	714
BpmI	CTGGAG	1 cut(s)	183
Bpu14I	TTCGAA	1 cut(s)	1292
BpuEI	CTTGAG	1 cut(s)	243
BpuMI	CCSGG	3 cut(s)	537, 1131, 1209
BsaBI	GATNNNNATC	1 cut(s)	29
BsaJI	CCNNGG	3 cut(s)	485, 589, 808
BsaWI	WCCGGW	1 cut(s)	848
BsaXI	ACNNNNNCTCC	2 cut(s)	531, 561
Bsc4I	CCNNNNNNNGG	3 cut(s)	215, 790, 952
Bse1I	ACTGG	3 cut(s)	133, 784, 1136
Bse3DI	GCAATG	1 cut(s)	1161
Bse8I	GATNNNNATC	1 cut(s)	29
BseAI	TCCGGA	1 cut(s)	848
BseDI	CCNNGG	3 cut(s)	485, 589, 808
BseGI	GGATG	1 cut(s)	112
BseJI	GATNNNNATC	1 cut(s)	29
BseLI	CCNNNNNNNGG	3 cut(s)	215, 790, 952
BseMI	GCAATG	1 cut(s)	1161
BseMII	CTCAG	2 cut(s)	164, 746
BseNI	ACTGG	3 cut(s)	133, 784, 1136
BseRI	GAGGAG	2 cut(s)	98, 1029
BseSI	GKGCMC	1 cut(s)	537
BseXI	GCAGC	3 cut(s)	826, 1084, 1228
BseYI	CCCAGC	2 cut(s)	492, 1251
BsgI	GTGCAG	3 cut(s)	542, 1104, 1235
BshFI	GGCC	3 cut(s)	535, 945, 973
BshNI	GGYRCC	1 cut(s)	1064
BsiHKAI	GWGCWC	1 cut(s)	962
BsiSI	CCGG	4 cut(s)	537, 849, 1130, 1208
BslFI	GGGAC	1 cut(s)	1146
BslI	CCNNNNNNNGG	3 cut(s)	215, 790, 952
BsmFI	GGGAC	1 cut(s)	1146
BsmI	GAATGC	1 cut(s)	240
BsnI	GGCC	3 cut(s)	535, 945, 973
Bsp119I	TTCGAA	1 cut(s)	1292
Bsp120I	GGGCCC	1 cut(s)	533
Bsp1286I	GDGCHC	2 cut(s)	537, 962
Bsp13I	TCCGGA	1 cut(s)	848
Bsp1407I	TGTACA	1 cut(s)	877
Bsp143I	GATC	4 cut(s)	12, 30, 505, 998
BspACI	CCGC	1 cut(s)	1269
BspANI	GGCC	3 cut(s)	535, 945, 973
BspCNI	CTCAG	2 cut(s)	163, 745
BspEI	TCCGGA	1 cut(s)	848
BspHI	TCATGA	1 cut(s)	247
BspLI	GGNNCC	4 cut(s)	535, 657, 1066, 1134
BspMAI	CTGCAG	1 cut(s)	1102
BspMI	ACCTGC	2 cut(s)	1091, 1323
BspPI	GGATC	2 cut(s)	25, 1006
BspT104I	TTCGAA	1 cut(s)	1292
BspT107I	GGYRCC	1 cut(s)	1064
BsrBI	CCGCTC	1 cut(s)	1269
BsrDI	GCAATG	1 cut(s)	1161
BsrGI	TGTACA	1 cut(s)	877
BsrI	ACTGG	3 cut(s)	133, 784, 1136
BssECI	CCNNGG	3 cut(s)	485, 589, 808
BssMI	GATC	4 cut(s)	12, 30, 505, 998
BssT1I	CCWWGG	1 cut(s)	485
Bst4CI	ACNGT	2 cut(s)	464, 691
Bst6I	CTCTTC	4 cut(s)	47, 61, 69, 90
BstAUI	TGTACA	1 cut(s)	877
BstBI	TTCGAA	1 cut(s)	1292
BstC8I	GCNNGC	4 cut(s)	189, 837, 947, 1147
BstDEI	CTNAG	3 cut(s)	150, 509, 732
BstDSI	CCRYGG	1 cut(s)	808
BstF5I	GGATG	1 cut(s)	112
BstKTI	GATC	4 cut(s)	15, 33, 508, 1001
BstMBI	GATC	4 cut(s)	12, 30, 505, 998
BstMWI	GCNNNNNNNGC	4 cut(s)	389, 908, 1064, 1151
BstNSI	RCATGY	1 cut(s)	191
BstSCI	CCNGG	3 cut(s)	535, 1129, 1207
BstSFI	CTRYAG	1 cut(s)	1098
BstSLI	GKGCMC	1 cut(s)	537
BstV1I	GCAGC	3 cut(s)	826, 1084, 1228
BstV2I	GAAGAC	1 cut(s)	714
BstXI	CCANNNNNNTGG	1 cut(s)	992
BsuI	GTATCC	1 cut(s)	1184
BsuRI	GGCC	3 cut(s)	535, 945, 973
BtgI	CCRYGG	1 cut(s)	808
BtrI	CACGTC	1 cut(s)	1309
BtsCI	GGATG	1 cut(s)	112
BtsIMutI	CAGTG	3 cut(s)	411, 696, 921
BveI	ACCTGC	2 cut(s)	1091, 1323
Cac8I	GCNNGC	4 cut(s)	189, 837, 947, 1147
CaiI	CAGNNNCTG	1 cut(s)	1142
CciI	TCATGA	1 cut(s)	247
Cfr13I	GGNCC	5 cut(s)	533, 534, 655, 1127, 1133
CseI	GACGC	1 cut(s)	1338
Csp6I	GTAC	1 cut(s)	878
CspCI	CAANNNNNGTGG	2 cut(s)	1098, 1133
CviAII	CATG	7 cut(s)	188, 215, 248, 373, 620, 1150, 1325
CviQI	GTAC	1 cut(s)	878
DdeI	CTNAG	3 cut(s)	150, 509, 732
DpnI	GATC	4 cut(s)	14, 32, 507, 1000
DpnII	GATC	4 cut(s)	12, 30, 505, 998
DraI	TTTAAA	1 cut(s)	270
DriI	GACNNNNNGTC	1 cut(s)	988
EaeI	YGGCCR	1 cut(s)	943
Eam1104I	CTCTTC	4 cut(s)	47, 61, 69, 90
Eam1105I	GACNNNNNGTC	1 cut(s)	988
EarI	CTCTTC	4 cut(s)	47, 61, 69, 90
Eco130I	CCWWGG	1 cut(s)	485
Eco24I	GRGCYC	1 cut(s)	537
Eco32I	GATATC	1 cut(s)	139
Eco47I	GGWCC	3 cut(s)	655, 1127, 1133
Eco57I	CTGAAG	1 cut(s)	243
EcoRV	GATATC	1 cut(s)	139
EcoT14I	CCWWGG	1 cut(s)	485
EcoT38I	GRGCYC	1 cut(s)	537
ErhI	CCWWGG	1 cut(s)	485
FaeI	CATG	7 cut(s)	191, 218, 251, 376, 623, 1153, 1328
FaqI	GGGAC	1 cut(s)	1146
FatI	CATG	7 cut(s)	187, 214, 247, 372, 619, 1149, 1324
FblI	GTMKAC	1 cut(s)	606
Fnu4HI	GCNGC	3 cut(s)	840, 1098, 1217
FokI	GGATG	1 cut(s)	119
FriOI	GRGCYC	1 cut(s)	537
Fsp4HI	GCNGC	3 cut(s)	840, 1098, 1217
FspBI	CTAG	3 cut(s)	486, 671, 1029
GluI	GCNGC	3 cut(s)	840, 1098, 1217
GsaI	CCCAGC	2 cut(s)	496, 1255
GsuI	CTGGAG	1 cut(s)	183
HaeIII	GGCC	3 cut(s)	535, 945, 973
HapII	CCGG	4 cut(s)	537, 849, 1130, 1208
HgaI	GACGC	1 cut(s)	1338
Hin1II	CATG	7 cut(s)	191, 218, 251, 376, 623, 1153, 1328
HincII	GTYRAC	1 cut(s)	607
HindII	GTYRAC	1 cut(s)	607
HinfI	GANTC	5 cut(s)	113, 329, 719, 1165, 1316
HpaII	CCGG	4 cut(s)	537, 849, 1130, 1208
HphI	GGTGA	2 cut(s)	347, 748
Hpy166II	GTNNAC	1 cut(s)	607
Hpy188I	TCNGA	5 cut(s)	126, 153, 223, 312, 388
Hpy188III	TCNNGA	8 cut(s)	16, 34, 142, 162, 248, 260, 849, 1125
Hpy8I	GTNNAC	1 cut(s)	607
HpyAV	CCTTC	3 cut(s)	215, 508, 733
HpyCH4III	ACNGT	2 cut(s)	464, 691
HpyCH4IV	ACGT	2 cut(s)	1194, 1308
HpyCH4V	TGCA	9 cut(s)	353, 523, 842, 887, 968, 1085, 1100, 1201, 1216
HpyF10VI	GCNNNNNNNGC	4 cut(s)	389, 908, 1064, 1151
HpyF3I	CTNAG	3 cut(s)	150, 509, 732
HpySE526I	ACGT	2 cut(s)	1194, 1308
Hsp92II	CATG	7 cut(s)	191, 218, 251, 376, 623, 1153, 1328
Kpn2I	TCCGGA	1 cut(s)	848
Kzo9I	GATC	4 cut(s)	12, 30, 505, 998
LmnI	GCTCC	4 cut(s)	489, 688, 793, 1266
Lsp1109I	GCAGC	3 cut(s)	826, 1084, 1228
LweI	GCATC	3 cut(s)	241, 379, 1149
MaeI	CTAG	3 cut(s)	486, 671, 1029
MaeII	ACGT	2 cut(s)	1194, 1308
MaeIII	GTNAC	3 cut(s)	358, 772, 1271
MalI	GATC	4 cut(s)	14, 32, 507, 1000
MbiI	CCGCTC	1 cut(s)	1269
MboI	GATC	4 cut(s)	12, 30, 505, 998
MhlI	GDGCHC	2 cut(s)	537, 962
MlsI	TGGCCA	1 cut(s)	945
MluCI	AATT	7 cut(s)	194, 416, 432, 662, 757, 867, 1003
MluNI	TGGCCA	1 cut(s)	945
MlyI	GAGTC	1 cut(s)	728
MmeI	TCCRAC	2 cut(s)	149, 933
Mox20I	TGGCCA	1 cut(s)	945
MroI	TCCGGA	1 cut(s)	848
MscI	TGGCCA	1 cut(s)	945
MseI	TTAA	6 cut(s)	269, 420, 435, 543, 666, 788
MslI	CAYNNNNRTG	4 cut(s)	377, 624, 1154, 1311
Msp20I	TGGCCA	1 cut(s)	945
MspA1I	CMGCKG	2 cut(s)	839, 949
MspI	CCGG	4 cut(s)	537, 849, 1130, 1208
MspR9I	CCNGG	3 cut(s)	537, 1131, 1209
Mva1269I	GAATGC	1 cut(s)	240
MwoI	GCNNNNNNNGC	4 cut(s)	389, 908, 1064, 1151
NciI	CCSGG	3 cut(s)	537, 1131, 1209
NdeII	GATC	4 cut(s)	12, 30, 505, 998
NlaIII	CATG	7 cut(s)	191, 218, 251, 376, 623, 1153, 1328
NlaIV	GGNNCC	4 cut(s)	535, 657, 1066, 1134
NmuCI	GTSAC	1 cut(s)	772
NspI	RCATGY	1 cut(s)	191
NspV	TTCGAA	1 cut(s)	1292
PaeI	GCATGC	1 cut(s)	191
PagI	TCATGA	1 cut(s)	247
PctI	GAATGC	1 cut(s)	240
PfeI	GAWTC	4 cut(s)	113, 329, 1165, 1316
PflMI	CCANNNNNTGG	2 cut(s)	215, 952
PkrI	GCNGC	3 cut(s)	841, 1099, 1218
PleI	GAGTC	1 cut(s)	727
PpsI	GAGTC	1 cut(s)	727
PspFI	CCCAGC	2 cut(s)	492, 1251
PspN4I	GGNNCC	4 cut(s)	535, 657, 1066, 1134
PspOMI	GGGCCC	1 cut(s)	533
PspPI	GGNCC	5 cut(s)	533, 534, 655, 1127, 1133
PsrI	GAACNNNNNNTAC	4 cut(s)	291, 323, 1273, 1305
PstI	CTGCAG	1 cut(s)	1102
PstNI	CAGNNNCTG	1 cut(s)	1142
PvuII	CAGCTG	2 cut(s)	839, 949
RsaI	GTAC	1 cut(s)	879
RsaNI	GTAC	1 cut(s)	878
RseI	CAYNNNNRTG	4 cut(s)	377, 624, 1154, 1311
SalI	GTCGAC	1 cut(s)	605
SaqAI	TTAA	6 cut(s)	269, 420, 435, 543, 666, 788
SatI	GCNGC	3 cut(s)	840, 1098, 1217
Sau3AI	GATC	4 cut(s)	12, 30, 505, 998
Sau96I	GGNCC	5 cut(s)	533, 534, 655, 1127, 1133
SchI	GAGTC	1 cut(s)	728
ScrFI	CCNGG	3 cut(s)	537, 1131, 1209
SduI	GDGCHC	2 cut(s)	537, 962
SfaNI	GCATC	3 cut(s)	241, 379, 1149
SfcI	CTRYAG	1 cut(s)	1098
SfuI	TTCGAA	1 cut(s)	1292
SinI	GGWCC	3 cut(s)	655, 1127, 1133
SmiMI	CAYNNNNRTG	4 cut(s)	377, 624, 1154, 1311
SmlI	CTYRAG	1 cut(s)	258
SmoI	CTYRAG	1 cut(s)	258
SphI	GCATGC	1 cut(s)	191
Sse9I	AATT	7 cut(s)	194, 416, 432, 662, 757, 867, 1003
SsiI	CCGC	1 cut(s)	1269
SspMI	CTAG	3 cut(s)	486, 671, 1029
StyD4I	CCNGG	3 cut(s)	535, 1129, 1207
StyI	CCWWGG	1 cut(s)	485
TaaI	ACNGT	2 cut(s)	464, 691
TaiI	ACGT	2 cut(s)	1197, 1311
TaqI	TCGA	3 cut(s)	443, 606, 1292
TasI	AATT	7 cut(s)	194, 416, 432, 662, 757, 867, 1003
TatI	WGTACW	1 cut(s)	877
TfiI	GAWTC	4 cut(s)	113, 329, 1165, 1316
Tru1I	TTAA	6 cut(s)	269, 420, 435, 543, 666, 788
Tru9I	TTAA	6 cut(s)	269, 420, 435, 543, 666, 788
TscAI	CASTG	3 cut(s)	418, 696, 928
TseFI	GTSAC	1 cut(s)	772
TseI	GCWGC	3 cut(s)	839, 1097, 1216
Tsp45I	GTSAC	1 cut(s)	772
TspDTI	ATGAA	7 cut(s)	65, 87, 123, 460, 584, 920, 948
TspGWI	ACGGA	2 cut(s)	668, 1198
TspRI	CASTG	3 cut(s)	418, 696, 928
Van91I	CCANNNNNTGG	2 cut(s)	215, 952
VpaK11BI	GGWCC	3 cut(s)	655, 1127, 1133
XapI	RAATTY	5 cut(s)	194, 416, 662, 757, 1003
XceI	RCATGY	1 cut(s)	191
XcmI	CCANNNNNNNNNTGG	1 cut(s)	992
XmaJI	CCTAGG	1 cut(s)	485
XmiI	GTMKAC	1 cut(s)	606
XspI	CTAG	3 cut(s)	486, 671, 1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.