Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Reverse (-)

2155071 .. 2160447

Gene Structure 5377 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1023900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1476 bp

ATGCCGAAAACAAGGACAAATTCTGGGGATGCATCTGAAAGGCATGTAGAATCTGATGAGCGGGTGGACTTGGATGGAGACAATGATCCTGAGGAAACAATAGAAGAGGAGGTTGAGTATGAAGAAGTAGAGGAGGAGGAGGAAGTTGAGGTGGAAGAAGAGGAGGAAGAGGAAGAAGAAGATCCAGAAGAGGAGGTTGAGGAAGAGGAAGAAAATAAGCAACCTGCTACAAAATCTGATGGACAGAAAAGCTCAGATGGTGATGAAGAGATGACAGTTGCTGGTGCAGAGGATGAGGAGGAGAAAACGAAGCATGCTGAGCTTCTTGCACGGCCACCACATGGGTCAGAGGTGTATCTTGGTGGCATTCCTCATGATGCATCCGAAGAGGATTTGAGGGGATTTTGTGAATCTATTGGGGAAGTGACTGAGGTTAGAATAATGAAGGGAAAAGATTCAGGTGAGGCCAAAGGTTATGCTTTTGTAACCTTCAGAAACAAGGAATTGGCTTCTAAGGCCATCGAGGAACTGAATAATTCGGAGTTAAAGGGAAAAAGGATTAAATGTTCAACATCTCAAGCCAAGCATAGGTTGTTCATCGGAAATGTTCCAAGAAGTTGGGGAGAGGAAGATATGAAGAGGGCTGTAACAGATATTGGCCCAGGAGTCATTTCTGTGGAATTGTTGAAGGACCCACAGAATTCCAGCCGAAATCGTGGATTCGCGTTTATTGAGTATTATAATCATGCCTGCGCAGAATACTCAAGACAAAAGATGTCCACCCCAAAATTTAAGCTTGACACAAATGCTCCAACTGTGAGCTGGGCTGATCCTAAAAATACAGAATCCTCTGCTGCTTCTCAGGTTAAGGCTGTGTATGTCAAAAATTTACCAAAAGACATTACTCAGGATCAGCTGAAGGATCTGTTTGAACATCATGGAAAGATAACAAAGGTGGTTCTCCCGCCCGCCAAAGCGGGACAGGAAAAGAGCAGATTTGGTTTTGTGCACTTTGCGGAAAGGGCATGTGCCATGAAGGCATTGAAGAACACTGAAAAATATGAAATTGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAATCAGATCAGAAGTCTTCTGGATCATCAAATCATCAGAAGTCGGCCTTACTTCCAACCTACCCACCACGTCTGGGGTATGGCATGATAGGGGGTAGTCCATACGGTGGTGGCTTAGGTGCTGGATACAGCGGTCCGGGATTTGGACAACCACTGATATATGGTAGGGGACCAACTCCTGCTGGCATGGCAATGATGCCTATGCTTTTGCCTGATGGTAGGATTGGATATGTCCTGCAACAGCCCGGAGTACAACCACAGACGCCTCCACTGCAGTCCCGAGGTGGAAGAAGCGGTGGCGGTGGCAGCTCAAGTGGTGGAAGGCGAAGCGGTGAGAACAGCCGCGGCCGTCATCGCTACAACCCGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0030895 GO:0031647 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050821 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

492

Amino Acids

53.92

Weight (kDa)

4.94

Isoelectric Point (pI)

63.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	118 - 188	6.3e-19	RNA recognition motif
RRM_1	PF00076	198 - 263	4.1e-08	RNA recognition motif
RRM_1	PF00076	292 - 361	1.4e-16	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	741
Acc16I	TGCGCA	1 cut(s)	754
Acc36I	ACCTGC	1 cut(s)	232
AccB7I	CCANNNNNTGG	2 cut(s)	341, 1211
AccBSI	CCGCTC	1 cut(s)	61
AccII	CGCG	2 cut(s)	725, 1449
AclWI	GGATC	6 cut(s)	80, 176, 824, 918, 930, 1135
AcoI	YGGCCR	2 cut(s)	332, 1450
AcsI	RAATTY	4 cut(s)	19, 700, 788, 886
AcuI	CTGAAG	2 cut(s)	475, 938
AcyI	GRCGYC	1 cut(s)	1367
AfaI	GTAC	1 cut(s)	1356
AfiI	CCNNNNNNNGG	5 cut(s)	341, 588, 1178, 1211, 1247
AgsI	TTSAA	4 cut(s)	570, 688, 932, 1045
AjiI	CACGTC	1 cut(s)	1175
AjnI	CCWGG	1 cut(s)	661
AloI	GAACNNNNNNTCC	2 cut(s)	550, 582
AluBI	AGCT	6 cut(s)	252, 322, 796, 822, 916, 1413
AluI	AGCT	6 cut(s)	252, 322, 796, 822, 916, 1413
Alw21I	GWGCWC	1 cut(s)	1011
Alw26I	GTCTC	1 cut(s)	72
Alw44I	GTGCAC	1 cut(s)	1007
AlwI	GGATC	6 cut(s)	80, 176, 824, 918, 930, 1135
AlwNI	CAGNNNCTG	1 cut(s)	281
Ama87I	CYCGRG	1 cut(s)	1383
AoxI	GGCC	6 cut(s)	332, 465, 516, 658, 1149, 1450
ApaLI	GTGCAC	1 cut(s)	1007
ApeKI	GCWGC	2 cut(s)	854, 1410
ApoI	RAATTY	4 cut(s)	19, 700, 788, 886
Asp700I	GAANNNNTTC	1 cut(s)	454
AspLEI	GCGC	1 cut(s)	755
AspS9I	GGNCC	4 cut(s)	659, 691, 1238, 1274
AsuC2I	CCSGG	2 cut(s)	1242, 1350
AsuHPI	GGTGA	3 cut(s)	272, 473, 1448
AvaI	CYCGRG	1 cut(s)	1383
AvaII	GGWCC	3 cut(s)	691, 1238, 1274
AxyI	CCTNAGG	1 cut(s)	90
BaeGI	GKGCMC	1 cut(s)	1011
BaeI	ACNNNNGTAYC	2 cut(s)	1222, 1255
BbsI	GAAGAC	1 cut(s)	1113
Bbv12I	GWGCWC	1 cut(s)	1011
BbvI	GCAGC	2 cut(s)	841, 1422
BccI	CCATC	6 cut(s)	68, 233, 251, 527, 1064, 1313
BceAI	ACGGC	2 cut(s)	347, 1437
BciT130I	CCWGG	1 cut(s)	663
BciVI	GTATCC	1 cut(s)	1223
BcnI	CCSGG	2 cut(s)	1242, 1350
BcoDI	GTCTC	1 cut(s)	72
BfmI	CTRYAG	1 cut(s)	1376
BfuAI	ACCTGC	1 cut(s)	232
BfuI	GTATCC	1 cut(s)	1223
BglI	GCCNNNNNGGC	1 cut(s)	1037
BisI	GCNGC	4 cut(s)	855, 1411, 1447, 1450
BlpI	GCTNAGC	1 cut(s)	318
BlsI	GCNGC	4 cut(s)	856, 1412, 1448, 1451
Bme1390I	CCNGG	3 cut(s)	663, 1242, 1350
Bme18I	GGWCC	3 cut(s)	691, 1238, 1274
BmeT110I	CYCGRG	1 cut(s)	1383
BmgBI	CACGTC	1 cut(s)	1175
BmgT120I	GGNCC	4 cut(s)	659, 691, 1238, 1274
BmiI	GGNNCC	2 cut(s)	693, 1275
BmrFI	CCNGG	3 cut(s)	663, 1242, 1350
BmsI	GCATC	5 cut(s)	19, 41, 367, 389, 1290
BpiI	GAAGAC	1 cut(s)	1113
Bpu10I	CCTNAGC	1 cut(s)	1219
Bpu1102I	GCTNAGC	1 cut(s)	318
BpuEI	CTTGAG	3 cut(s)	561, 748, 1399
BpuMI	CCSGG	2 cut(s)	1242, 1350
BsaHI	GRCGYC	1 cut(s)	1367
BsaJI	CCNNGG	3 cut(s)	661, 1384, 1447
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 793, 823
Bsc4I	CCNNNNNNNGG	5 cut(s)	341, 588, 1178, 1211, 1247
Bse21I	CCTNAGG	1 cut(s)	90
Bse3DI	GCAATG	1 cut(s)	1302
BseBI	CCWGG	1 cut(s)	663
BseDI	CCNNGG	3 cut(s)	661, 1384, 1447
BseGI	GGATG	4 cut(s)	34, 79, 298, 380
BseLI	CCNNNNNNNGG	5 cut(s)	341, 588, 1178, 1211, 1247
BseMI	GCAATG	1 cut(s)	1302
BseMII	CTCAG	6 cut(s)	81, 267, 309, 420, 875, 920
BseRI	GAGGAG	8 cut(s)	122, 146, 149, 152, 176, 206, 311, 314
BseSI	GKGCMC	1 cut(s)	1011
BseX3I	CGGCCG	1 cut(s)	1450
BseXI	GCAGC	2 cut(s)	841, 1422
BseYI	CCCAGC	1 cut(s)	822
BsgI	GTGCAG	1 cut(s)	306
Bsh1236I	CGCG	2 cut(s)	725, 1449
Bsh1285I	CGRYCG	1 cut(s)	1453
BshFI	GGCC	6 cut(s)	334, 467, 518, 660, 1151, 1452
BsiEI	CGRYCG	1 cut(s)	1453
BsiHKAI	GWGCWC	1 cut(s)	1011
BsiHKCI	CYCGRG	1 cut(s)	1383
BsiSI	CCGG	2 cut(s)	1241, 1350
BslFI	GGGAC	3 cut(s)	993, 1287, 1366
BslI	CCNNNNNNNGG	5 cut(s)	341, 588, 1178, 1211, 1247
BsmAI	GTCTC	1 cut(s)	72
BsmFI	GGGAC	3 cut(s)	993, 1287, 1366
BsmI	GAATGC	1 cut(s)	366
BsnI	GGCC	6 cut(s)	334, 467, 518, 660, 1151, 1452
BsoBI	CYCGRG	1 cut(s)	1383
Bsp1286I	GDGCHC	1 cut(s)	1011
Bsp143I	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
Bsp1720I	GCTNAGC	1 cut(s)	318
BspANI	GGCC	6 cut(s)	334, 467, 518, 660, 1151, 1452
BspCNI	CTCAG	6 cut(s)	82, 266, 310, 421, 874, 919
BspFNI	CGCG	2 cut(s)	725, 1449
BspHI	TCATGA	1 cut(s)	373
BspLI	GGNNCC	2 cut(s)	693, 1275
BspMAI	CTGCAG	1 cut(s)	1380
BspMI	ACCTGC	1 cut(s)	232
BspPI	GGATC	6 cut(s)	80, 176, 824, 918, 930, 1135
BsrBI	CCGCTC	1 cut(s)	61
BsrDI	GCAATG	1 cut(s)	1302
BssECI	CCNNGG	3 cut(s)	661, 1384, 1447
BssMI	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
BssNI	GRCGYC	1 cut(s)	1367
Bst2UI	CCWGG	1 cut(s)	663
Bst4CI	ACNGT	3 cut(s)	277, 817, 1211
Bst6I	CTCTTC	8 cut(s)	99, 153, 162, 183, 198, 261, 381, 632
BstACI	GRCGYC	1 cut(s)	1367
BstC8I	GCNNGC	4 cut(s)	315, 751, 969, 1288
BstDEI	CTNAG	8 cut(s)	90, 253, 318, 429, 513, 861, 906, 1219
BstDSI	CCRYGG	1 cut(s)	1447
BstF5I	GGATG	4 cut(s)	34, 79, 298, 380
BstFNI	CGCG	2 cut(s)	725, 1449
BstHHI	GCGC	1 cut(s)	755
BstKTI	GATC	7 cut(s)	88, 184, 832, 913, 925, 1114, 1130
BstMAI	GTCTC	1 cut(s)	72
BstMBI	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
BstMCI	CGRYCG	1 cut(s)	1453
BstMWI	GCNNNNNNNGC	8 cut(s)	319, 515, 1022, 1037, 1292, 1375, 1410, 1458
BstNI	CCWGG	1 cut(s)	663
BstNSI	RCATGY	3 cut(s)	47, 317, 1029
BstSCI	CCNGG	3 cut(s)	661, 1240, 1348
BstSFI	CTRYAG	1 cut(s)	1376
BstSLI	GKGCMC	1 cut(s)	1011
BstUI	CGCG	2 cut(s)	725, 1449
BstV1I	GCAGC	2 cut(s)	841, 1422
BstV2I	GAAGAC	1 cut(s)	1113
BstX2I	RGATCY	2 cut(s)	181, 922
BstXI	CCANNNNNNTGG	1 cut(s)	618
BstYI	RGATCY	2 cut(s)	181, 922
BstZI	CGGCCG	1 cut(s)	1450
Bsu36I	CCTNAGG	1 cut(s)	90
BsuI	GTATCC	1 cut(s)	1223
BsuRI	GGCC	6 cut(s)	334, 467, 518, 660, 1151, 1452
BtgI	CCRYGG	1 cut(s)	1447
BtgZI	GCGATG	1 cut(s)	1442
BtrI	CACGTC	1 cut(s)	1175
BtsCI	GGATG	4 cut(s)	34, 79, 298, 380
BtsI	GCAGTG	1 cut(s)	1373
BtsIMutI	CAGTG	3 cut(s)	1050, 1256, 1373
BveI	ACCTGC	1 cut(s)	232
Cac8I	GCNNGC	4 cut(s)	315, 751, 969, 1288
CaiI	CAGNNNCTG	1 cut(s)	281
CciI	TCATGA	1 cut(s)	373
CfoI	GCGC	1 cut(s)	755
Cfr13I	GGNCC	4 cut(s)	659, 691, 1238, 1274
Cfr42I	CCGCGG	1 cut(s)	1450
CpoI	CGGWCCG	1 cut(s)	1238
CseI	GACGC	1 cut(s)	1375
Csp6I	GTAC	1 cut(s)	1355
CspI	CGGWCCG	1 cut(s)	1238
CviQI	GTAC	1 cut(s)	1355
DdeI	CTNAG	8 cut(s)	90, 253, 318, 429, 513, 861, 906, 1219
DpnI	GATC	7 cut(s)	87, 183, 831, 912, 924, 1113, 1129
DpnII	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
EaeI	YGGCCR	2 cut(s)	332, 1450
EagI	CGGCCG	1 cut(s)	1450
Eam1104I	CTCTTC	8 cut(s)	99, 153, 162, 183, 198, 261, 381, 632
EarI	CTCTTC	8 cut(s)	99, 153, 162, 183, 198, 261, 381, 632
EclXI	CGGCCG	1 cut(s)	1450
Eco47I	GGWCC	3 cut(s)	691, 1238, 1274
Eco52I	CGGCCG	1 cut(s)	1450
Eco57I	CTGAAG	2 cut(s)	475, 938
Eco81I	CCTNAGG	1 cut(s)	90
Eco88I	CYCGRG	1 cut(s)	1383
EcoO109I	RGGNCCY	1 cut(s)	691
EcoRI	GAATTC	1 cut(s)	700
EcoRII	CCWGG	1 cut(s)	661
EcoT22I	ATGCAT	2 cut(s)	34, 382
FalI	AAGNNNNNCTT	2 cut(s)	1136, 1168
FaqI	GGGAC	3 cut(s)	993, 1287, 1366
FauI	CCCGC	4 cut(s)	54, 970, 972, 976
Fnu4HI	GCNGC	4 cut(s)	855, 1411, 1447, 1450
FokI	GGATG	4 cut(s)	41, 86, 305, 367
Fsp4HI	GCNGC	4 cut(s)	855, 1411, 1447, 1450
FspI	TGCGCA	1 cut(s)	754
GlaI	GCGC	1 cut(s)	754
GluI	GCNGC	4 cut(s)	855, 1411, 1447, 1450
GsaI	CCCAGC	1 cut(s)	826
HaeIII	GGCC	6 cut(s)	334, 467, 518, 660, 1151, 1452
HapII	CCGG	2 cut(s)	1241, 1350
HgaI	GACGC	1 cut(s)	1375
HhaI	GCGC	1 cut(s)	755
Hin1I	GRCGYC	1 cut(s)	1367
Hin6I	GCGC	1 cut(s)	753
HinP1I	GCGC	1 cut(s)	753
HindIII	AAGCTT	1 cut(s)	794
HinfI	GANTC	6 cut(s)	50, 410, 455, 666, 720, 845
HpaII	CCGG	2 cut(s)	1241, 1350
HphI	GGTGA	3 cut(s)	272, 473, 1448
Hpy166II	GTNNAC	3 cut(s)	67, 780, 1009
Hpy188III	TCNNGA	7 cut(s)	89, 185, 374, 765, 908, 1125, 1383
Hpy8I	GTNNAC	3 cut(s)	67, 780, 1009
HpyAV	CCTTC	6 cut(s)	439, 499, 682, 913, 1030, 1419
HpyCH4III	ACNGT	3 cut(s)	277, 817, 1211
HpyCH4IV	ACGT	1 cut(s)	1174
HpyCH4V	TGCA	8 cut(s)	32, 287, 329, 380, 1009, 1097, 1342, 1378
HpyF10VI	GCNNNNNNNGC	8 cut(s)	319, 515, 1022, 1037, 1292, 1375, 1410, 1458
HpyF3I	CTNAG	8 cut(s)	90, 253, 318, 429, 513, 861, 906, 1219
HpySE526I	ACGT	1 cut(s)	1174
Hsp92I	GRCGYC	1 cut(s)	1367
HspAI	GCGC	1 cut(s)	753
KspI	CCGCGG	1 cut(s)	1450
Kzo9I	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
LmnI	GCTCC	1 cut(s)	814
Lsp1109I	GCAGC	2 cut(s)	841, 1422
LweI	GCATC	5 cut(s)	19, 41, 367, 389, 1290
MaeII	ACGT	1 cut(s)	1174
MaeIII	GTNAC	3 cut(s)	424, 484, 646
MalI	GATC	7 cut(s)	87, 183, 831, 912, 924, 1113, 1129
MbiI	CCGCTC	1 cut(s)	61
MboI	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
MflI	RGATCY	2 cut(s)	181, 922
MhlI	GDGCHC	1 cut(s)	1011
MluCI	AATT	8 cut(s)	19, 503, 535, 680, 700, 788, 886, 1065
MlyI	GAGTC	1 cut(s)	675
MmeI	TCCRAC	2 cut(s)	836, 1184
Mph1103I	ATGCAT	2 cut(s)	34, 382
MroXI	GAANNNNTTC	1 cut(s)	454
MseI	TTAA	5 cut(s)	545, 561, 792, 867, 1474
MslI	CAYNNNNRTG	2 cut(s)	674, 1295
MspA1I	CMGCKG	3 cut(s)	916, 1236, 1449
MspI	CCGG	2 cut(s)	1241, 1350
MspR9I	CCNGG	3 cut(s)	663, 1242, 1350
Mva1269I	GAATGC	1 cut(s)	366
MvaI	CCWGG	1 cut(s)	663
MvnI	CGCG	2 cut(s)	725, 1449
MwoI	GCNNNNNNNGC	8 cut(s)	319, 515, 1022, 1037, 1292, 1375, 1410, 1458
NciI	CCSGG	2 cut(s)	1242, 1350
NdeII	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
NlaIV	GGNNCC	2 cut(s)	693, 1275
NmuCI	GTSAC	1 cut(s)	424
NsbI	TGCGCA	1 cut(s)	754
NsiI	ATGCAT	2 cut(s)	34, 382
NspI	RCATGY	3 cut(s)	47, 317, 1029
PaeI	GCATGC	1 cut(s)	317
PagI	TCATGA	1 cut(s)	373
PctI	GAATGC	1 cut(s)	366
PdmI	GAANNNNTTC	1 cut(s)	454
PfeI	GAWTC	5 cut(s)	50, 410, 455, 720, 845
PflMI	CCANNNNNTGG	2 cut(s)	341, 1211
PfoI	TCCNGGA	1 cut(s)	1240
PkrI	GCNGC	4 cut(s)	856, 1412, 1448, 1451
PleI	GAGTC	1 cut(s)	674
PpsI	GAGTC	1 cut(s)	674
PpuMI	RGGWCCY	1 cut(s)	691
PsiI	TTATAA	1 cut(s)	741
Psp5II	RGGWCCY	1 cut(s)	691
Psp6I	CCWGG	1 cut(s)	661
PspFI	CCCAGC	1 cut(s)	822
PspGI	CCWGG	1 cut(s)	661
PspN4I	GGNNCC	2 cut(s)	693, 1275
PspPI	GGNCC	4 cut(s)	659, 691, 1238, 1274
PspPPI	RGGWCCY	1 cut(s)	691
PstI	CTGCAG	1 cut(s)	1380
PstNI	CAGNNNCTG	1 cut(s)	281
PsuI	RGATCY	2 cut(s)	181, 922
PvuII	CAGCTG	1 cut(s)	916
RsaI	GTAC	1 cut(s)	1356
RsaNI	GTAC	1 cut(s)	1355
RseI	CAYNNNNRTG	2 cut(s)	674, 1295
Rsr2I	CGGWCCG	1 cut(s)	1238
RsrII	CGGWCCG	1 cut(s)	1238
SacII	CCGCGG	1 cut(s)	1450
SaqAI	TTAA	5 cut(s)	545, 561, 792, 867, 1474
SatI	GCNGC	4 cut(s)	855, 1411, 1447, 1450
Sau3AI	GATC	7 cut(s)	85, 181, 829, 910, 922, 1111, 1127
Sau96I	GGNCC	4 cut(s)	659, 691, 1238, 1274
SchI	GAGTC	1 cut(s)	675
ScrFI	CCNGG	3 cut(s)	663, 1242, 1350
SduI	GDGCHC	1 cut(s)	1011
SfaNI	GCATC	5 cut(s)	19, 41, 367, 389, 1290
SfcI	CTRYAG	1 cut(s)	1376
Sfr303I	CCGCGG	1 cut(s)	1450
SgrBI	CCGCGG	1 cut(s)	1450
SinI	GGWCC	3 cut(s)	691, 1238, 1274
SmiMI	CAYNNNNRTG	2 cut(s)	674, 1295
SmlI	CTYRAG	3 cut(s)	576, 763, 1414
SmoI	CTYRAG	3 cut(s)	576, 763, 1414
SphI	GCATGC	1 cut(s)	317
Sse9I	AATT	8 cut(s)	19, 503, 535, 680, 700, 788, 886, 1065
StyD4I	CCNGG	3 cut(s)	661, 1240, 1348
TaaI	ACNGT	3 cut(s)	277, 817, 1211
TaiI	ACGT	1 cut(s)	1177
TaqI	TCGA	1 cut(s)	522
TasI	AATT	8 cut(s)	19, 503, 535, 680, 700, 788, 886, 1065
TatI	WGTACW	1 cut(s)	1354
TauI	GCSGC	2 cut(s)	1449, 1452
TfiI	GAWTC	5 cut(s)	50, 410, 455, 720, 845
Tru1I	TTAA	5 cut(s)	545, 561, 792, 867, 1474
Tru9I	TTAA	5 cut(s)	545, 561, 792, 867, 1474
TscAI	CASTG	3 cut(s)	1057, 1263, 1380
TseFI	GTSAC	1 cut(s)	424
TseI	GCWGC	2 cut(s)	854, 1410
Tsp45I	GTSAC	1 cut(s)	424
TspDTI	ATGAA	7 cut(s)	135, 279, 458, 586, 650, 1049, 1077
TspRI	CASTG	3 cut(s)	1057, 1263, 1380
Van91I	CCANNNNNTGG	2 cut(s)	341, 1211
VneI	GTGCAC	1 cut(s)	1007
VpaK11BI	GGWCC	3 cut(s)	691, 1238, 1274
XapI	RAATTY	4 cut(s)	19, 700, 788, 886
XceI	RCATGY	3 cut(s)	47, 317, 1029
XcmI	CCANNNNNNNNNTGG	1 cut(s)	819
XmnI	GAANNNNTTC	1 cut(s)	454
Zsp2I	ATGCAT	2 cut(s)	34, 382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.