Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Forward (+)

22375932 .. 22380024

Gene Structure 4093 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0217400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1725 bp

ATGGCCCTTTCAACCAGGCAGAGACGTCCTCAACCGTCCGATCCTTCATCTTCATCGTCGCCGTCGCCGTCGCCGTCTGTATCCTACACCAAAGTCGACAAGCAAGGCAAATCAGGTGGCGTCGGGGTTGAGAAGGGCTTCAGTTGGTTCGTTCCGCTCTTGGCTTTGGGTATGCTAAGATACATGAGCGCCACATCCAACATCATTCACGACTGCGATGAGGTCTTTAACTATTGGGAGCCTCTGCATTACCTTCTCTACAAATCTGGCTTCCAAACTTGGGAATACAGTTCTCAGTTTGCACTCAGGTCGTATTTGTACATTCTTTTCCATGAGTTGGTGGGTCGACCGGCTTCCTTGTTGTTTGGAGAGGAAAAAGTGAGGGTATTTTATGCTGTCAGGATCTTTCTTGGTCTCATTTCTGTTATCACTGAAACCATTCTGGTTTATGCTCTGTCAAGAAAGTATGGAAAACGTCTTGCCTCGTATACACTTGCCATGCTATGCTTAACCAGCGGTTGTTTCTTTGCTAGTACAAGTTTCTTGCCAAGTTCGTTCTCTATGTATGCCGTCTCTCTTTCATCGGGGCTGTTTCTTCTAGACAAACCTGCCATGGCAGTTTCAGTTGCAGCTGCTGGTGTAATCCTTGGCTGGCCTTTCTCAATCTTGGTTTTTCTGCCCCTCACATTCTATTCTCTGGCTAGAAAATTCAAACAAGCATTTATTGCTGGGGCTGCCACCTCTATTGTTGTTCTTGCACTGTCGGTTCTCGTTGACTACAGCTACTACAGAAGATGGACATCATCTGTGTTAAACTTATTCATCTACAATGTTGCAGGAGGTGGTGAGAGCCATTTGTATGGAACTGAAGGACCGCTCTTTTATCTACGGAATGGGTTTAACAATTTTAACTTCTGTTTTGTACTTGCATTGCTGTTTCTGGTAATGCTGCCAATCGCAAAGAAAAAGTATGCCCCTGACCTGCTGATTGTGGTCTCGCCTATATATATTTGGTTGGCGTTTATGTCTCTGCAGCCACATAAAGAAGAAAGGTTTCTTTATCCGATATATCCACTAATTTGTGTCGCTGCTTCAGCTGTTATTGAGAGCTTTCCTGATGTTTTTCGATCCAAGTATAATCCCCATGACAATTCTATATTGGTTATGACTGCAAAGATTCTTAGGCCAGTGGTTCTTAGTCTTATTCTGTGTGCTTCGCATGCTCGAACGTTTTCACTGATTAATGGATATTCTGCTCCAATAGAGATTTACAAGCTTTTGGAGCATCATGAAGATGCAGGACCAGGTTCTGTACTTTGTGTTGGAAGTGAATGGCACCGTTTCCCATCATCCTTCTTTGTTCCTGATTATGTGGGAGAGGTCCGTTGGATAGATGATGGGTTCCGAGGACTCCTTCCATTCCCATTCAATTCTACGTTGGGTGGAACAGCAGCGGCCCCACCATATCTTAACAATAAGAACAAAGCGTCTGACGAGCAATATCTCCGGGATCTTGAACATTGTACATTCCTTGTTGAGCTCGAGCTTAGTCGACCCTTCCCTTCTCGTGGGAGTGACTCTTCAACTTGGGAGGTGATTGCAGCATTGCCTTACCTGGACCGGGAGCTATCGCCTGCCAAGTACCGCTCATTTTTCATCCCATATGTGTGGATGCACAAGAATATATTTGGCATGTACAAGCTTCTTAGAAGAATACCGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071310 GO:0071345 GO:0071346 GO:0071704 GO:0080090 GO:0090304 GO:0097452 GO:1901360 GO:1902369 GO:1902373 GO:1902494 GO:1903311 GO:1903312 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

574

Amino Acids

64.67

Weight (kDa)

9.04

Isoelectric Point (pI)

58.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_22	PF03901	53 - 455	7.9e-116	Alg9-like mannosyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	28
Acc36I	ACCTGC	2 cut(s)	616, 990
AccB1I	GGYRCC	1 cut(s)	1335
AccB7I	CCANNNNNTGG	1 cut(s)	337
AccBSI	CCGCTC	3 cut(s)	157, 877, 1647
AccI	GTMKAC	4 cut(s)	96, 346, 488, 1552
AciI	CCGC	5 cut(s)	155, 516, 875, 1454, 1645
AclI	AACGTT	1 cut(s)	1229
AclWI	GGATC	4 cut(s)	35, 410, 1122, 1518
AcsI	RAATTY	1 cut(s)	707
AcuI	CTGAAG	3 cut(s)	124, 888, 1077
AcyI	GRCGYC	2 cut(s)	25, 120
AfaI	GTAC	7 cut(s)	320, 535, 924, 1314, 1525, 1643, 1697
AfiI	CCNNNNNNNGG	4 cut(s)	280, 337, 1568, 1621
AgsI	TTSAA	5 cut(s)	12, 712, 1429, 1517, 1584
AjnI	CCWGG	3 cut(s)	14, 1303, 1614
AluBI	AGCT	9 cut(s)	632, 783, 1097, 1110, 1276, 1540, 1546, 1627, 1702
AluI	AGCT	9 cut(s)	632, 783, 1097, 1110, 1276, 1540, 1546, 1627, 1702
Alw21I	GWGCWC	1 cut(s)	1542
Alw26I	GTCTC	5 cut(s)	16, 419, 577, 1000, 1032
AlwI	GGATC	4 cut(s)	35, 410, 1122, 1518
AlwNI	CAGNNNCTG	2 cut(s)	635, 1310
Ama87I	CYCGRG	1 cut(s)	1541
AoxI	GGCC	4 cut(s)	3, 653, 1184, 1455
ApeKI	GCWGC	8 cut(s)	629, 632, 734, 949, 1033, 1088, 1451, 1601
ApoI	RAATTY	1 cut(s)	707
AseI	ATTAAT	1 cut(s)	1242
Asp700I	GAANNNNTTC	4 cut(s)	137, 438, 1053, 1231
AspLEI	GCGC	1 cut(s)	191
AspS9I	GGNCC	6 cut(s)	4, 872, 1301, 1381, 1456, 1618
AsuC2I	CCSGG	2 cut(s)	1508, 1622
AsuHPI	GGTGA	2 cut(s)	857, 1606
AvaI	CYCGRG	1 cut(s)	1541
AvaII	GGWCC	4 cut(s)	872, 1301, 1381, 1618
BanI	GGYRCC	1 cut(s)	1335
BanII	GRGCYC	1 cut(s)	1542
BauI	CACGAG	1 cut(s)	1566
Bbv12I	GWGCWC	1 cut(s)	1542
BbvI	GCAGC	8 cut(s)	619, 641, 721, 936, 1045, 1075, 1463, 1613
BccI	CCATC	3 cut(s)	789, 1354, 1391
BceAI	ACGGC	4 cut(s)	46, 52, 58, 554
BcgI	CGANNNNNNTGC	2 cut(s)	291, 325
BciT130I	CCWGG	3 cut(s)	16, 1305, 1616
BciVI	GTATCC	1 cut(s)	91
BcnI	CCSGG	2 cut(s)	1508, 1622
BcoDI	GTCTC	5 cut(s)	16, 419, 577, 1000, 1032
BfaI	CTAG	3 cut(s)	531, 599, 702
BfmI	CTRYAG	3 cut(s)	778, 787, 1031
BfoI	RGCGCY	1 cut(s)	192
BfuAI	ACCTGC	2 cut(s)	616, 990
BfuI	GTATCC	1 cut(s)	91
BisI	GCNGC	9 cut(s)	630, 633, 735, 950, 1034, 1089, 1452, 1455, 1602
BlsI	GCNGC	9 cut(s)	631, 634, 736, 951, 1035, 1090, 1453, 1456, 1603
Bme1390I	CCNGG	5 cut(s)	16, 1305, 1508, 1616, 1622
Bme18I	GGWCC	4 cut(s)	872, 1301, 1381, 1618
BmeT110I	CYCGRG	1 cut(s)	1541
BmgT120I	GGNCC	6 cut(s)	4, 872, 1301, 1381, 1456, 1618
BmiI	GGNNCC	4 cut(s)	240, 1337, 1403, 1458
BmrFI	CCNGG	5 cut(s)	16, 1305, 1508, 1616, 1622
BmsI	GCATC	3 cut(s)	1285, 1294, 1662
BplI	GAGNNNNNCTC	2 cut(s)	13, 45
BpuMI	CCSGG	2 cut(s)	1508, 1622
BsaBI	GATNNNNATC	1 cut(s)	799
BsaHI	GRCGYC	2 cut(s)	25, 120
BsaI	GGTCTC	2 cut(s)	419, 1000
BsaJI	CCNNGG	3 cut(s)	612, 646, 1405
Bsc4I	CCNNNNNNNGG	4 cut(s)	280, 337, 1568, 1621
Bse118I	RCCGGY	1 cut(s)	349
Bse1I	ACTGG	1 cut(s)	1187
Bse3DI	GCAATG	2 cut(s)	929, 1604
Bse8I	GATNNNNATC	1 cut(s)	799
BseBI	CCWGG	3 cut(s)	16, 1305, 1616
BseDI	CCNNGG	3 cut(s)	612, 646, 1405
BseGI	GGATG	4 cut(s)	194, 1349, 1656, 1677
BseJI	GATNNNNATC	1 cut(s)	799
BseLI	CCNNNNNNNGG	4 cut(s)	280, 337, 1568, 1621
BseMI	GCAATG	2 cut(s)	929, 1604
BseMII	CTCAG	2 cut(s)	308, 319
BseNI	ACTGG	1 cut(s)	1187
BseXI	GCAGC	8 cut(s)	619, 641, 721, 936, 1045, 1075, 1463, 1613
BseYI	CCCAGC	1 cut(s)	728
Bsh1285I	CGRYCG	1 cut(s)	350
BshFI	GGCC	4 cut(s)	5, 655, 1186, 1457
BshNI	GGYRCC	1 cut(s)	1335
BsiEI	CGRYCG	1 cut(s)	350
BsiHKAI	GWGCWC	1 cut(s)	1542
BsiHKCI	CYCGRG	1 cut(s)	1541
BsiSI	CCGG	3 cut(s)	350, 1507, 1621
BslI	CCNNNNNNNGG	4 cut(s)	280, 337, 1568, 1621
BsmAI	GTCTC	5 cut(s)	16, 419, 577, 1000, 1032
BsmBI	CGTCTC	2 cut(s)	16, 577
BsnI	GGCC	4 cut(s)	5, 655, 1186, 1457
Bso31I	GGTCTC	2 cut(s)	419, 1000
BsoBI	CYCGRG	1 cut(s)	1541
Bsp1286I	GDGCHC	1 cut(s)	1542
Bsp1407I	TGTACA	3 cut(s)	318, 1523, 1695
Bsp143I	GATC	4 cut(s)	40, 402, 1127, 1510
Bsp19I	CCATGG	1 cut(s)	612
BspACI	CCGC	5 cut(s)	155, 516, 875, 1454, 1645
BspANI	GGCC	4 cut(s)	5, 655, 1186, 1457
BspCNI	CTCAG	2 cut(s)	307, 318
BspHI	TCATGA	1 cut(s)	1288
BspLI	GGNNCC	4 cut(s)	240, 1337, 1403, 1458
BspMAI	CTGCAG	1 cut(s)	1035
BspMI	ACCTGC	2 cut(s)	616, 990
BspPI	GGATC	4 cut(s)	35, 410, 1122, 1518
BspT107I	GGYRCC	1 cut(s)	1335
BspTNI	GGTCTC	2 cut(s)	419, 1000
BsrBI	CCGCTC	3 cut(s)	157, 877, 1647
BsrDI	GCAATG	2 cut(s)	929, 1604
BsrFI	RCCGGY	1 cut(s)	349
BsrGI	TGTACA	3 cut(s)	318, 1523, 1695
BsrI	ACTGG	1 cut(s)	1187
BssAI	RCCGGY	1 cut(s)	349
BssECI	CCNNGG	3 cut(s)	612, 646, 1405
BssMI	GATC	4 cut(s)	40, 402, 1127, 1510
BssNAI	GTATAC	1 cut(s)	489
BssNI	GRCGYC	2 cut(s)	25, 120
BssSI	CACGAG	1 cut(s)	1566
BssT1I	CCWWGG	2 cut(s)	612, 646
Bst1107I	GTATAC	1 cut(s)	489
Bst2BI	CACGAG	1 cut(s)	1566
Bst2UI	CCWGG	3 cut(s)	16, 1305, 1616
Bst4CI	ACNGT	4 cut(s)	36, 290, 762, 1340
Bst6I	CTCTTC	1 cut(s)	1585
BstACI	GRCGYC	2 cut(s)	25, 120
BstAPI	GCANNNNNTGC	1 cut(s)	725
BstAUI	TGTACA	3 cut(s)	318, 1523, 1695
BstC8I	GCNNGC	3 cut(s)	653, 1221, 1635
BstDEI	CTNAG	7 cut(s)	176, 294, 305, 1181, 1196, 1547, 1706
BstDSI	CCRYGG	1 cut(s)	612
BstF5I	GGATG	4 cut(s)	194, 1349, 1656, 1677
BstH2I	RGCGCY	1 cut(s)	192
BstHHI	GCGC	1 cut(s)	191
BstKTI	GATC	4 cut(s)	43, 405, 1130, 1513
BstMAI	GTCTC	5 cut(s)	16, 419, 577, 1000, 1032
BstMBI	GATC	4 cut(s)	40, 402, 1127, 1510
BstMCI	CGRYCG	1 cut(s)	350
BstMWI	GCNNNNNNNGC	6 cut(s)	513, 725, 734, 1094, 1220, 1282
BstNI	CCWGG	3 cut(s)	16, 1305, 1616
BstNSI	RCATGY	2 cut(s)	1223, 1696
BstSCI	CCNGG	5 cut(s)	14, 1303, 1506, 1614, 1620
BstSFI	CTRYAG	3 cut(s)	778, 787, 1031
BstV1I	GCAGC	8 cut(s)	619, 641, 721, 936, 1045, 1075, 1463, 1613
BstX2I	RGATCY	2 cut(s)	402, 1510
BstXI	CCANNNNNNTGG	2 cut(s)	860, 1668
BstYI	RGATCY	2 cut(s)	402, 1510
BstZ17I	GTATAC	1 cut(s)	489
BsuI	GTATCC	1 cut(s)	91
BsuRI	GGCC	4 cut(s)	5, 655, 1186, 1457
BtgI	CCRYGG	1 cut(s)	612
BtgZI	GCGATG	1 cut(s)	231
BtsCI	GGATG	4 cut(s)	194, 1349, 1656, 1677
BtsIMutI	CAGTG	4 cut(s)	429, 758, 1194, 1235
BveI	ACCTGC	2 cut(s)	616, 990
Cac8I	GCNNGC	3 cut(s)	653, 1221, 1635
CaiI	CAGNNNCTG	2 cut(s)	635, 1310
CciI	TCATGA	1 cut(s)	1288
CfoI	GCGC	1 cut(s)	191
Cfr10I	RCCGGY	1 cut(s)	349
Cfr13I	GGNCC	6 cut(s)	4, 872, 1301, 1381, 1456, 1618
CseI	GACGC	2 cut(s)	109, 1476
CsiI	ACCWGGT	1 cut(s)	1303
Csp6I	GTAC	7 cut(s)	319, 534, 923, 1313, 1524, 1642, 1696
CspCI	CAANNNNNGTGG	4 cut(s)	97, 132, 727, 762
CviAII	CATG	8 cut(s)	184, 332, 499, 613, 1145, 1220, 1289, 1693
CviQI	GTAC	7 cut(s)	319, 534, 923, 1313, 1524, 1642, 1696
DdeI	CTNAG	7 cut(s)	176, 294, 305, 1181, 1196, 1547, 1706
DpnI	GATC	4 cut(s)	42, 404, 1129, 1512
DpnII	GATC	4 cut(s)	40, 402, 1127, 1510
Eam1104I	CTCTTC	1 cut(s)	1585
EarI	CTCTTC	1 cut(s)	1585
Ecl136II	GAGCTC	1 cut(s)	1540
Eco130I	CCWWGG	2 cut(s)	612, 646
Eco24I	GRGCYC	1 cut(s)	1542
Eco31I	GGTCTC	2 cut(s)	419, 1000
Eco47I	GGWCC	4 cut(s)	872, 1301, 1381, 1618
Eco53kI	GAGCTC	1 cut(s)	1540
Eco57I	CTGAAG	3 cut(s)	124, 888, 1077
Eco88I	CYCGRG	1 cut(s)	1541
EcoICRI	GAGCTC	1 cut(s)	1540
EcoRII	CCWGG	3 cut(s)	14, 1303, 1614
EcoT14I	CCWWGG	2 cut(s)	612, 646
EcoT38I	GRGCYC	1 cut(s)	1542
ErhI	CCWWGG	2 cut(s)	612, 646
Esp3I	CGTCTC	2 cut(s)	16, 577
FaeI	CATG	8 cut(s)	187, 335, 502, 616, 1148, 1223, 1292, 1696
FatI	CATG	8 cut(s)	183, 331, 498, 612, 1144, 1219, 1288, 1692
FauNDI	CATATG	1 cut(s)	1663
FblI	GTMKAC	4 cut(s)	96, 346, 488, 1552
Fnu4HI	GCNGC	9 cut(s)	630, 633, 735, 950, 1034, 1089, 1452, 1455, 1602
FokI	GGATG	4 cut(s)	181, 1336, 1643, 1684
FriOI	GRGCYC	1 cut(s)	1542
Fsp4HI	GCNGC	9 cut(s)	630, 633, 735, 950, 1034, 1089, 1452, 1455, 1602
FspBI	CTAG	3 cut(s)	531, 599, 702
GlaI	GCGC	1 cut(s)	190
GluI	GCNGC	9 cut(s)	630, 633, 735, 950, 1034, 1089, 1452, 1455, 1602
GsaI	CCCAGC	1 cut(s)	732
HaeII	RGCGCY	1 cut(s)	192
HaeIII	GGCC	4 cut(s)	5, 655, 1186, 1457
HapII	CCGG	3 cut(s)	350, 1507, 1621
HgaI	GACGC	2 cut(s)	109, 1476
HhaI	GCGC	1 cut(s)	191
Hin1I	GRCGYC	2 cut(s)	25, 120
Hin1II	CATG	8 cut(s)	187, 335, 502, 616, 1148, 1223, 1292, 1696
Hin6I	GCGC	1 cut(s)	189
HinP1I	GCGC	1 cut(s)	189
HincII	GTYRAC	4 cut(s)	97, 347, 775, 1553
HindII	GTYRAC	4 cut(s)	97, 347, 775, 1553
HindIII	AAGCTT	2 cut(s)	1274, 1700
HinfI	GANTC	3 cut(s)	1177, 1410, 1577
HpaII	CCGG	3 cut(s)	350, 1507, 1621
HphI	GGTGA	2 cut(s)	857, 1606
Hpy166II	GTNNAC	5 cut(s)	97, 347, 489, 775, 1553
Hpy188I	TCNGA	4 cut(s)	40, 1065, 1406, 1492
Hpy188III	TCNNGA	8 cut(s)	209, 400, 459, 599, 1115, 1289, 1364, 1514
Hpy8I	GTNNAC	5 cut(s)	97, 347, 489, 775, 1553
Hpy99I	CGWCG	4 cut(s)	61, 67, 73, 125
HpyAV	CCTTC	8 cut(s)	54, 127, 263, 863, 1363, 1424, 1567, 1572
HpyCH4III	ACNGT	4 cut(s)	36, 290, 762, 1340
HpyCH4IV	ACGT	4 cut(s)	25, 475, 1229, 1436
HpyF10VI	GCNNNNNNNGC	6 cut(s)	513, 725, 734, 1094, 1220, 1282
HpyF3I	CTNAG	7 cut(s)	176, 294, 305, 1181, 1196, 1547, 1706
HpySE526I	ACGT	4 cut(s)	25, 475, 1229, 1436
Hsp92I	GRCGYC	2 cut(s)	25, 120
Hsp92II	CATG	8 cut(s)	187, 335, 502, 616, 1148, 1223, 1292, 1696
HspAI	GCGC	1 cut(s)	189
Kzo9I	GATC	4 cut(s)	40, 402, 1127, 1510
LmnI	GCTCC	4 cut(s)	238, 1261, 1282, 1624
Lsp1109I	GCAGC	8 cut(s)	619, 641, 721, 936, 1045, 1075, 1463, 1613
LweI	GCATC	3 cut(s)	1285, 1294, 1662
MabI	ACCWGGT	1 cut(s)	1303
MaeI	CTAG	3 cut(s)	531, 599, 702
MaeII	ACGT	4 cut(s)	25, 475, 1229, 1436
MaeIII	GTNAC	1 cut(s)	1574
MalI	GATC	4 cut(s)	42, 404, 1129, 1512
MbiI	CCGCTC	3 cut(s)	157, 877, 1647
MboI	GATC	4 cut(s)	40, 402, 1127, 1510
MboII	GAAGA	7 cut(s)	42, 587, 804, 1058, 1304, 1572, 1722
MflI	RGATCY	2 cut(s)	402, 1510
MhlI	GDGCHC	1 cut(s)	1542
MluCI	AATT	5 cut(s)	707, 904, 1077, 1150, 1429
MlyI	GAGTC	2 cut(s)	1404, 1571
MmeI	TCCRAC	3 cut(s)	222, 1303, 1367
MroXI	GAANNNNTTC	4 cut(s)	137, 438, 1053, 1231
MseI	TTAA	7 cut(s)	228, 509, 812, 900, 909, 1242, 1470
MslI	CAYNNNNRTG	3 cut(s)	858, 1293, 1666
MspA1I	CMGCKG	4 cut(s)	516, 632, 1097, 1454
MspI	CCGG	3 cut(s)	350, 1507, 1621
MspR9I	CCNGG	5 cut(s)	16, 1305, 1508, 1616, 1622
MvaI	CCWGG	3 cut(s)	16, 1305, 1616
MwoI	GCNNNNNNNGC	6 cut(s)	513, 725, 734, 1094, 1220, 1282
NciI	CCSGG	2 cut(s)	1508, 1622
NcoI	CCATGG	1 cut(s)	612
NdeI	CATATG	1 cut(s)	1663
NdeII	GATC	4 cut(s)	40, 402, 1127, 1510
NlaIII	CATG	8 cut(s)	187, 335, 502, 616, 1148, 1223, 1292, 1696
NlaIV	GGNNCC	4 cut(s)	240, 1337, 1403, 1458
NmuCI	GTSAC	1 cut(s)	1574
NspI	RCATGY	2 cut(s)	1223, 1696
PaeI	GCATGC	1 cut(s)	1223
PaeR7I	CTCGAG	1 cut(s)	1541
PagI	TCATGA	1 cut(s)	1288
PcsI	WCGNNNNNNNCGW	2 cut(s)	65, 71
PdmI	GAANNNNTTC	4 cut(s)	137, 438, 1053, 1231
PfeI	GAWTC	1 cut(s)	1177
PflMI	CCANNNNNTGG	1 cut(s)	337
PfoI	TCCNGGA	1 cut(s)	1506
PkrI	GCNGC	9 cut(s)	631, 634, 736, 951, 1035, 1090, 1453, 1456, 1603
PleI	GAGTC	2 cut(s)	1404, 1571
PpsI	GAGTC	2 cut(s)	1404, 1571
PshBI	ATTAAT	1 cut(s)	1242
Psp124BI	GAGCTC	1 cut(s)	1542
Psp1406I	AACGTT	1 cut(s)	1229
Psp6I	CCWGG	3 cut(s)	14, 1303, 1614
PspFI	CCCAGC	1 cut(s)	728
PspGI	CCWGG	3 cut(s)	14, 1303, 1614
PspN4I	GGNNCC	4 cut(s)	240, 1337, 1403, 1458
PspPI	GGNCC	6 cut(s)	4, 872, 1301, 1381, 1456, 1618
PspXI	VCTCGAGB	1 cut(s)	1541
PstI	CTGCAG	1 cut(s)	1035
PstNI	CAGNNNCTG	2 cut(s)	635, 1310
PsuI	RGATCY	2 cut(s)	402, 1510
PvuII	CAGCTG	2 cut(s)	632, 1097
RsaI	GTAC	7 cut(s)	320, 535, 924, 1314, 1525, 1643, 1697
RsaNI	GTAC	7 cut(s)	319, 534, 923, 1313, 1524, 1642, 1696
RseI	CAYNNNNRTG	3 cut(s)	858, 1293, 1666
SacI	GAGCTC	1 cut(s)	1542
SalI	GTCGAC	3 cut(s)	95, 345, 1551
SaqAI	TTAA	7 cut(s)	228, 509, 812, 900, 909, 1242, 1470
SatI	GCNGC	9 cut(s)	630, 633, 735, 950, 1034, 1089, 1452, 1455, 1602
Sau3AI	GATC	4 cut(s)	40, 402, 1127, 1510
Sau96I	GGNCC	6 cut(s)	4, 872, 1301, 1381, 1456, 1618
SchI	GAGTC	2 cut(s)	1404, 1571
ScrFI	CCNGG	5 cut(s)	16, 1305, 1508, 1616, 1622
SduI	GDGCHC	1 cut(s)	1542
SexAI	ACCWGGT	1 cut(s)	1303
SfaNI	GCATC	3 cut(s)	1285, 1294, 1662
SfcI	CTRYAG	3 cut(s)	778, 787, 1031
Sfr274I	CTCGAG	1 cut(s)	1541
SinI	GGWCC	4 cut(s)	872, 1301, 1381, 1618
SlaI	CTCGAG	1 cut(s)	1541
SmiMI	CAYNNNNRTG	3 cut(s)	858, 1293, 1666
SmlI	CTYRAG	1 cut(s)	1541
SmoI	CTYRAG	1 cut(s)	1541
SphI	GCATGC	1 cut(s)	1223
Sse9I	AATT	5 cut(s)	707, 904, 1077, 1150, 1429
SsiI	CCGC	5 cut(s)	155, 516, 875, 1454, 1645
SspMI	CTAG	3 cut(s)	531, 599, 702
SstI	GAGCTC	1 cut(s)	1542
StyD4I	CCNGG	5 cut(s)	14, 1303, 1506, 1614, 1620
StyI	CCWWGG	2 cut(s)	612, 646
TaaI	ACNGT	4 cut(s)	36, 290, 762, 1340
TaiI	ACGT	4 cut(s)	28, 478, 1232, 1439
TaqI	TCGA	6 cut(s)	96, 346, 1126, 1225, 1542, 1552
TasI	AATT	5 cut(s)	707, 904, 1077, 1150, 1429
TatI	WGTACW	6 cut(s)	318, 533, 922, 1312, 1523, 1695
TauI	GCSGC	1 cut(s)	1457
TfiI	GAWTC	1 cut(s)	1177
Tru1I	TTAA	7 cut(s)	228, 509, 812, 900, 909, 1242, 1470
Tru9I	TTAA	7 cut(s)	228, 509, 812, 900, 909, 1242, 1470
TscAI	CASTG	4 cut(s)	436, 765, 1194, 1242
TseFI	GTSAC	1 cut(s)	1574
TseI	GCWGC	8 cut(s)	629, 632, 734, 949, 1033, 1088, 1451, 1601
Tsp45I	GTSAC	1 cut(s)	1574
TspDTI	ATGAA	6 cut(s)	36, 42, 570, 811, 1305, 1645
TspGWI	ACGGA	2 cut(s)	904, 1373
TspRI	CASTG	4 cut(s)	436, 765, 1194, 1242
Van91I	CCANNNNNTGG	1 cut(s)	337
VpaK11BI	GGWCC	4 cut(s)	872, 1301, 1381, 1618
VspI	ATTAAT	1 cut(s)	1242
XapI	RAATTY	1 cut(s)	707
XbaI	TCTAGA	1 cut(s)	598
XceI	RCATGY	2 cut(s)	1223, 1696
XhoI	CTCGAG	1 cut(s)	1541
XmiI	GTMKAC	4 cut(s)	96, 346, 488, 1552
XmnI	GAANNNNTTC	4 cut(s)	137, 438, 1053, 1231
XspI	CTAG	3 cut(s)	531, 599, 702
ZraI	GACGTC	1 cut(s)	26

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.