Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Forward (+)

30614328 .. 30617589

Gene Structure 3262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023975

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGCCGAAAACAAGGGAAAATGCTGCCAGAGATGCACCTGAAAGGCCTGTAGAATCCGAGGAGCAGGTGGACCTTGATGAAGACAATGATCCTGAGGAAACAATAGAAGAAGAGGTTGAGTATGAAGAAGTAGAGGAAGAGGAGGAAGTGGAAGAAGAAGAGGAAGAGGAAGAGGAAGATCCAGAAGAGGAGGAAGAGGATGAAAACAAGGGAGGTGATATAGAATCTAATGGGAAAAAAAGCGCAGATGGTGACGTAGAGATGAAAGTTACAGACGCAGAGGAGGAAGAGGATAAAAAGAAACACGCGGAGCTTCTTGCACTCCCTCAGCATGGGTCAGAGGTGTATCTTGGTGGCATTCCTCATGATGCATCTGAAGAGGATTTAAGGGGCTTTTGTGAATCTATTGGAGAAGTGACTGAGGTTAGAATAATGAAGGGAAAAGATTCGGGTGAGGCCAAAGGTTATGCTTTTGTAACATTCAGAAACAAGGAACTAGCTTCTAAGGCAATAGAGGAACTGAATAACTCTCAATTAAAGGGAAAAAAGATCAAGTGTTCTACATCGCAAGCCAAGCATCGTCTGTTCATTGGAAATGTTCCTAGAAATTGGGGAGAGGACGATATGAAGAAAGCTGTAACAGATACAGGGCCTGGAGTTATCTCTGTGGAACTGTTGAAGGACCCACAGAACTCCAGTCGGAACCGTGGATTTGCTTTCATCGAGTATTATAATCATGCATGTGCAGACTACTCTAGACAAAAGATGTCAACCTCAAAGTTCAAGCTTGATACTAATGCTCCAACTGTGAGTTGGGCGGATCCCAAGAATGCAGAATCCTCTGCCTCCTCTCAGGTTAAGGCAGTGTATGTCAAGAATCTACCAAAAGACATTACTCAGGATGATCTAAAAGAGCTTTTTGACCATCATGGAAAGATCACAAAGGTCGTTCTCCCACCTGCAAAAGCAGGACAGGAAAAGAGCAGATTTGGTTTTGTGCACTTTGCAGACAGGTCCAGTGCCATGAAGGCATTGAAGAACACTGAAAAATATGAAATTGGTGGTCAAGTTTTGGAGTGTTCTTTGGCAAAGCCTCAAGCAGATCAGAAATCTTCTGGTGCATCAAATCATCAGAAGTCAGCCCCACTTCCAACCTATCCGCCACATATCGGTTATGGCATGGTAGGGAGTGGGCCATATGGTCCCTTGGGTGCTGGATATGGTGGTGGTGCAGGATTTTCACAACCACTGATCTATGGGAGGGGACCCACTCCTGCTGGCATGGCGATGATGCCTATGCTTTTGCCTGATGGAAGAATTGGATATGTCCTGCAACAGCCTGGAGTACATCCTCATGCCCCTCCACCGCAGTCCCGAGGTGGAAGAAGTGGTGGCAGCTCAAGTGGTGGAAGGCGCAGCAATGACAGCAACCGTGGCCGTAGTCGCTACAACCCATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0030895 GO:0031647 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050821 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

487

Amino Acids

53.3

Weight (kDa)

4.94

Isoelectric Point (pI)

60.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	115 - 185	8.4e-19	RNA recognition motif
RRM_1	PF00076	195 - 262	9.5e-08	RNA recognition motif
RRM_10	PF22976	287 - 353	7.9e-06	RRM domain
RRM_1	PF00076	289 - 358	2.9e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	732
AarI	CACCTGC	2 cut(s)	55, 967
Acc36I	ACCTGC	2 cut(s)	55, 967
AccII	CGCG	1 cut(s)	308
AciI	CCGC	4 cut(s)	308, 818, 1160, 1367
AclWI	GGATC	4 cut(s)	83, 173, 815, 828
AcoI	YGGCCR	1 cut(s)	1435
AcuI	CTGAAG	1 cut(s)	396
AfaI	GTAC	1 cut(s)	1347
AfiI	CCNNNNNNNGG	2 cut(s)	332, 1169
AgsI	TTSAA	3 cut(s)	679, 784, 1036
AjnI	CCWGG	2 cut(s)	652, 1339
AluBI	AGCT	6 cut(s)	313, 500, 635, 787, 916, 1398
AluI	AGCT	6 cut(s)	313, 500, 635, 787, 916, 1398
Alw21I	GWGCWC	1 cut(s)	1002
Alw44I	GTGCAC	1 cut(s)	998
AlwI	GGATC	4 cut(s)	83, 173, 815, 828
AlwNI	CAGNNNCTG	1 cut(s)	653
Ama87I	CYCGRG	1 cut(s)	1374
AoxI	GGCC	5 cut(s)	44, 456, 650, 1193, 1435
ApaLI	GTGCAC	1 cut(s)	998
ApeKI	GCWGC	3 cut(s)	23, 1395, 1416
Asp700I	GAANNNNTTC	1 cut(s)	445
AspLEI	GCGC	2 cut(s)	245, 1416
AspS9I	GGNCC	7 cut(s)	70, 650, 682, 1014, 1193, 1202, 1265
AsuHPI	GGTGA	3 cut(s)	227, 263, 464
AvaI	CYCGRG	1 cut(s)	1374
AvaII	GGWCC	5 cut(s)	70, 682, 1014, 1202, 1265
AxyI	CCTNAGG	1 cut(s)	93
BaeGI	GKGCMC	1 cut(s)	1002
BamHI	GGATCC	1 cut(s)	820
BbsI	GAAGAC	1 cut(s)	87
Bbv12I	GWGCWC	1 cut(s)	1002
BbvCI	CCTCAGC	1 cut(s)	327
BbvI	GCAGC	3 cut(s)	10, 1407, 1428
BccI	CCATC	3 cut(s)	242, 933, 1304
BceAI	ACGGC	1 cut(s)	1422
BciT130I	CCWGG	2 cut(s)	654, 1341
BfaI	CTAG	3 cut(s)	497, 603, 756
BfmI	CTRYAG	1 cut(s)	48
BfuAI	ACCTGC	2 cut(s)	55, 967
BglI	GCCNNNNNGGC	1 cut(s)	1028
BisI	GCNGC	3 cut(s)	24, 1396, 1417
BlsI	GCNGC	3 cut(s)	25, 1397, 1418
Bme1390I	CCNGG	2 cut(s)	654, 1341
Bme18I	GGWCC	5 cut(s)	70, 682, 1014, 1202, 1265
BmeT110I	CYCGRG	1 cut(s)	1374
BmgT120I	GGNCC	7 cut(s)	70, 650, 682, 1014, 1193, 1202, 1265
BmiI	GGNNCC	6 cut(s)	684, 704, 822, 1204, 1266, 1267
BmrFI	CCNGG	2 cut(s)	654, 1341
BmsI	GCATC	6 cut(s)	22, 358, 380, 586, 1130, 1281
BpiI	GAAGAC	1 cut(s)	87
BpmI	CTGGAG	3 cut(s)	675, 679, 1362
Bpu10I	CCTNAGC	1 cut(s)	327
BpuEI	CTTGAG	2 cut(s)	1080, 1384
BsaJI	CCNNGG	5 cut(s)	57, 706, 1206, 1375, 1432
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	2 cut(s)	332, 1169
Bse1I	ACTGG	2 cut(s)	696, 1017
Bse21I	CCTNAGG	1 cut(s)	93
Bse3DI	GCAATG	1 cut(s)	1426
BseBI	CCWGG	2 cut(s)	654, 1341
BseDI	CCNNGG	5 cut(s)	57, 706, 1206, 1375, 1432
BseGI	GGATG	3 cut(s)	205, 907, 1348
BseLI	CCNNNNNNNGG	2 cut(s)	332, 1169
BseMI	GCAATG	1 cut(s)	1426
BseMII	CTCAG	5 cut(s)	84, 341, 411, 866, 911
BseNI	ACTGG	2 cut(s)	696, 1017
BseRI	GAGGAG	5 cut(s)	74, 155, 203, 296, 838
BseSI	GKGCMC	1 cut(s)	1002
BseXI	GCAGC	3 cut(s)	10, 1407, 1428
BsgI	GTGCAG	2 cut(s)	765, 1251
Bsh1236I	CGCG	1 cut(s)	308
BshFI	GGCC	5 cut(s)	46, 458, 652, 1195, 1437
BsiHKAI	GWGCWC	1 cut(s)	1002
BsiHKCI	CYCGRG	1 cut(s)	1374
BslFI	GGGAC	3 cut(s)	1188, 1278, 1357
BslI	CCNNNNNNNGG	2 cut(s)	332, 1169
BsmFI	GGGAC	3 cut(s)	1188, 1278, 1357
BsmI	GAATGC	2 cut(s)	357, 835
BsnI	GGCC	5 cut(s)	46, 458, 652, 1195, 1437
BsoBI	CYCGRG	1 cut(s)	1374
Bsp1286I	GDGCHC	1 cut(s)	1002
Bsp143I	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
BspACI	CCGC	4 cut(s)	308, 818, 1160, 1367
BspANI	GGCC	5 cut(s)	46, 458, 652, 1195, 1437
BspCNI	CTCAG	5 cut(s)	85, 340, 412, 865, 910
BspFNI	CGCG	1 cut(s)	308
BspHI	TCATGA	1 cut(s)	364
BspLI	GGNNCC	6 cut(s)	684, 704, 822, 1204, 1266, 1267
BspMI	ACCTGC	2 cut(s)	55, 967
BspPI	GGATC	4 cut(s)	83, 173, 815, 828
BsrDI	GCAATG	1 cut(s)	1426
BsrI	ACTGG	2 cut(s)	696, 1017
BssECI	CCNNGG	5 cut(s)	57, 706, 1206, 1375, 1432
BssMI	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
BssT1I	CCWWGG	1 cut(s)	1206
Bst2UI	CCWGG	2 cut(s)	654, 1341
Bst4CI	ACNGT	4 cut(s)	675, 707, 808, 1433
Bst6I	CTCTTC	9 cut(s)	105, 132, 153, 159, 165, 180, 189, 282, 372
BstC8I	GCNNGC	2 cut(s)	570, 1279
BstDEI	CTNAG	6 cut(s)	93, 327, 420, 504, 852, 897
BstDSI	CCRYGG	2 cut(s)	706, 1432
BstF5I	GGATG	3 cut(s)	205, 907, 1348
BstFNI	CGCG	1 cut(s)	308
BstHHI	GCGC	2 cut(s)	245, 1416
BstKTI	GATC	8 cut(s)	91, 181, 552, 823, 907, 939, 1105, 1254
BstMBI	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
BstMWI	GCNNNNNNNGC	8 cut(s)	32, 506, 574, 1028, 1283, 1425, 1434, 1443
BstNI	CCWGG	2 cut(s)	654, 1341
BstNSI	RCATGY	1 cut(s)	744
BstSCI	CCNGG	2 cut(s)	652, 1339
BstSFI	CTRYAG	1 cut(s)	48
BstSLI	GKGCMC	1 cut(s)	1002
BstUI	CGCG	1 cut(s)	308
BstV1I	GCAGC	3 cut(s)	10, 1407, 1428
BstV2I	GAAGAC	1 cut(s)	87
BstX2I	RGATCY	2 cut(s)	178, 820
BstYI	RGATCY	2 cut(s)	178, 820
Bsu36I	CCTNAGG	1 cut(s)	93
BsuRI	GGCC	5 cut(s)	46, 458, 652, 1195, 1437
BtgI	CCRYGG	2 cut(s)	706, 1432
BtgZI	GCGATG	2 cut(s)	549, 1301
BtsCI	GGATG	3 cut(s)	205, 907, 1348
BtsI	GCAGTG	1 cut(s)	870
BtsIMutI	CAGTG	4 cut(s)	870, 1024, 1041, 1247
BveI	ACCTGC	2 cut(s)	55, 967
Cac8I	GCNNGC	2 cut(s)	570, 1279
CaiI	CAGNNNCTG	1 cut(s)	653
CciI	TCATGA	1 cut(s)	364
CfoI	GCGC	2 cut(s)	245, 1416
Cfr13I	GGNCC	7 cut(s)	70, 650, 682, 1014, 1193, 1202, 1265
CseI	GACGC	1 cut(s)	284
Csp6I	GTAC	1 cut(s)	1346
CviAII	CATG	9 cut(s)	332, 365, 737, 741, 929, 1024, 1180, 1282, 1355
CviQI	GTAC	1 cut(s)	1346
DdeI	CTNAG	6 cut(s)	93, 327, 420, 504, 852, 897
DpnI	GATC	8 cut(s)	90, 180, 551, 822, 906, 938, 1104, 1253
DpnII	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
EaeI	YGGCCR	1 cut(s)	1435
Eam1104I	CTCTTC	9 cut(s)	105, 132, 153, 159, 165, 180, 189, 282, 372
EarI	CTCTTC	9 cut(s)	105, 132, 153, 159, 165, 180, 189, 282, 372
EciI	GGCGGA	2 cut(s)	833, 1149
Eco130I	CCWWGG	1 cut(s)	1206
Eco147I	AGGCCT	1 cut(s)	46
Eco47I	GGWCC	5 cut(s)	70, 682, 1014, 1202, 1265
Eco57I	CTGAAG	1 cut(s)	396
Eco81I	CCTNAGG	1 cut(s)	93
Eco88I	CYCGRG	1 cut(s)	1374
EcoO109I	RGGNCCY	3 cut(s)	650, 682, 1265
EcoRII	CCWGG	2 cut(s)	652, 1339
EcoT14I	CCWWGG	1 cut(s)	1206
EcoT22I	ATGCAT	2 cut(s)	373, 742
ErhI	CCWWGG	1 cut(s)	1206
FaeI	CATG	9 cut(s)	335, 368, 740, 744, 932, 1027, 1183, 1285, 1358
FaqI	GGGAC	3 cut(s)	1188, 1278, 1357
FatI	CATG	9 cut(s)	331, 364, 736, 740, 928, 1023, 1179, 1281, 1354
FauNDI	CATATG	1 cut(s)	1198
Fnu4HI	GCNGC	3 cut(s)	24, 1396, 1417
FokI	GGATG	3 cut(s)	212, 914, 1335
Fsp4HI	GCNGC	3 cut(s)	24, 1396, 1417
FspBI	CTAG	3 cut(s)	497, 603, 756
GlaI	GCGC	2 cut(s)	244, 1415
GluI	GCNGC	3 cut(s)	24, 1396, 1417
GsuI	CTGGAG	3 cut(s)	675, 679, 1362
HaeIII	GGCC	5 cut(s)	46, 458, 652, 1195, 1437
HgaI	GACGC	1 cut(s)	284
HhaI	GCGC	2 cut(s)	245, 1416
Hin1II	CATG	9 cut(s)	335, 368, 740, 744, 932, 1027, 1183, 1285, 1358
Hin6I	GCGC	2 cut(s)	243, 1414
HinP1I	GCGC	2 cut(s)	243, 1414
HincII	GTYRAC	1 cut(s)	771
HindII	GTYRAC	1 cut(s)	771
HindIII	AAGCTT	1 cut(s)	785
HinfI	GANTC	6 cut(s)	53, 224, 401, 446, 836, 877
HphI	GGTGA	3 cut(s)	227, 263, 464
Hpy166II	GTNNAC	3 cut(s)	70, 771, 1000
Hpy188I	TCNGA	7 cut(s)	58, 340, 376, 485, 702, 1107, 1134
Hpy188III	TCNNGA	7 cut(s)	92, 182, 365, 756, 874, 899, 1374
Hpy8I	GTNNAC	3 cut(s)	70, 771, 1000
HpyAV	CCTTC	4 cut(s)	430, 673, 1021, 1404
HpyCH4III	ACNGT	4 cut(s)	675, 707, 808, 1433
HpyCH4IV	ACGT	1 cut(s)	255
HpyF10VI	GCNNNNNNNGC	8 cut(s)	32, 506, 574, 1028, 1283, 1425, 1434, 1443
HpyF3I	CTNAG	6 cut(s)	93, 327, 420, 504, 852, 897
HpySE526I	ACGT	1 cut(s)	255
Hsp92II	CATG	9 cut(s)	335, 368, 740, 744, 932, 1027, 1183, 1285, 1358
HspAI	GCGC	2 cut(s)	243, 1414
KflI	GGGWCCC	1 cut(s)	1265
Kzo9I	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
LmnI	GCTCC	3 cut(s)	61, 310, 805
Lsp1109I	GCAGC	3 cut(s)	10, 1407, 1428
LweI	GCATC	6 cut(s)	22, 358, 380, 586, 1130, 1281
MaeI	CTAG	3 cut(s)	497, 603, 756
MaeII	ACGT	1 cut(s)	255
MaeIII	GTNAC	5 cut(s)	251, 268, 415, 475, 637
MalI	GATC	8 cut(s)	90, 180, 551, 822, 906, 938, 1104, 1253
MboI	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
MflI	RGATCY	2 cut(s)	178, 820
MhlI	GDGCHC	1 cut(s)	1002
MluCI	AATT	4 cut(s)	533, 607, 1056, 1317
MmeI	TCCRAC	3 cut(s)	680, 827, 1175
Mph1103I	ATGCAT	2 cut(s)	373, 742
MroXI	GAANNNNTTC	1 cut(s)	445
MseI	TTAA	4 cut(s)	386, 536, 858, 1459
MslI	CAYNNNNRTG	3 cut(s)	741, 1286, 1353
MspR9I	CCNGG	2 cut(s)	654, 1341
Mva1269I	GAATGC	2 cut(s)	357, 835
MvaI	CCWGG	2 cut(s)	654, 1341
MvnI	CGCG	1 cut(s)	308
MwoI	GCNNNNNNNGC	8 cut(s)	32, 506, 574, 1028, 1283, 1425, 1434, 1443
NdeI	CATATG	1 cut(s)	1198
NdeII	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
NlaIII	CATG	9 cut(s)	335, 368, 740, 744, 932, 1027, 1183, 1285, 1358
NlaIV	GGNNCC	6 cut(s)	684, 704, 822, 1204, 1266, 1267
NmuCI	GTSAC	2 cut(s)	251, 415
NsiI	ATGCAT	2 cut(s)	373, 742
NspI	RCATGY	1 cut(s)	744
PagI	TCATGA	1 cut(s)	364
PaqCI	CACCTGC	2 cut(s)	55, 967
PceI	AGGCCT	1 cut(s)	46
PctI	GAATGC	2 cut(s)	357, 835
PdmI	GAANNNNTTC	1 cut(s)	445
PfeI	GAWTC	6 cut(s)	53, 224, 401, 446, 836, 877
PkrI	GCNGC	3 cut(s)	25, 1397, 1418
PpuMI	RGGWCCY	2 cut(s)	682, 1265
PsiI	TTATAA	1 cut(s)	732
Psp5II	RGGWCCY	2 cut(s)	682, 1265
Psp6I	CCWGG	2 cut(s)	652, 1339
PspGI	CCWGG	2 cut(s)	652, 1339
PspN4I	GGNNCC	6 cut(s)	684, 704, 822, 1204, 1266, 1267
PspPI	GGNCC	7 cut(s)	70, 650, 682, 1014, 1193, 1202, 1265
PspPPI	RGGWCCY	2 cut(s)	682, 1265
PstNI	CAGNNNCTG	1 cut(s)	653
PsuI	RGATCY	2 cut(s)	178, 820
RsaI	GTAC	1 cut(s)	1347
RsaNI	GTAC	1 cut(s)	1346
RseI	CAYNNNNRTG	3 cut(s)	741, 1286, 1353
SaqAI	TTAA	4 cut(s)	386, 536, 858, 1459
SatI	GCNGC	3 cut(s)	24, 1396, 1417
Sau3AI	GATC	8 cut(s)	88, 178, 549, 820, 904, 936, 1102, 1251
Sau96I	GGNCC	7 cut(s)	70, 650, 682, 1014, 1193, 1202, 1265
ScrFI	CCNGG	2 cut(s)	654, 1341
SduI	GDGCHC	1 cut(s)	1002
SfaNI	GCATC	6 cut(s)	22, 358, 380, 586, 1130, 1281
SfcI	CTRYAG	1 cut(s)	48
SinI	GGWCC	5 cut(s)	70, 682, 1014, 1202, 1265
SmiMI	CAYNNNNRTG	3 cut(s)	741, 1286, 1353
SmlI	CTYRAG	2 cut(s)	1095, 1399
SmoI	CTYRAG	2 cut(s)	1095, 1399
Sse9I	AATT	4 cut(s)	533, 607, 1056, 1317
SseBI	AGGCCT	1 cut(s)	46
SsiI	CCGC	4 cut(s)	308, 818, 1160, 1367
SspMI	CTAG	3 cut(s)	497, 603, 756
StuI	AGGCCT	1 cut(s)	46
StyD4I	CCNGG	2 cut(s)	652, 1339
StyI	CCWWGG	1 cut(s)	1206
TaaI	ACNGT	4 cut(s)	675, 707, 808, 1433
TaiI	ACGT	1 cut(s)	258
TaqI	TCGA	1 cut(s)	723
TasI	AATT	4 cut(s)	533, 607, 1056, 1317
TatI	WGTACW	1 cut(s)	1345
TfiI	GAWTC	6 cut(s)	53, 224, 401, 446, 836, 877
Tru1I	TTAA	4 cut(s)	386, 536, 858, 1459
Tru9I	TTAA	4 cut(s)	386, 536, 858, 1459
TscAI	CASTG	4 cut(s)	870, 1024, 1048, 1254
TseFI	GTSAC	2 cut(s)	251, 415
TseI	GCWGC	3 cut(s)	23, 1395, 1416
Tsp45I	GTSAC	2 cut(s)	251, 415
TspRI	CASTG	4 cut(s)	870, 1024, 1048, 1254
VneI	GTGCAC	1 cut(s)	998
VpaK11BI	GGWCC	5 cut(s)	70, 682, 1014, 1202, 1265
XbaI	TCTAGA	1 cut(s)	755
XceI	RCATGY	1 cut(s)	744
XcmI	CCANNNNNNNNNTGG	1 cut(s)	810
XmnI	GAANNNNTTC	1 cut(s)	445
XspI	CTAG	3 cut(s)	497, 603, 756
Zsp2I	ATGCAT	2 cut(s)	373, 742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.