Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Reverse (-)

2693029 .. 2697775

Gene Structure 4747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1025200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1479 bp

ATGCCGAAAACAAGGACAAATGTTTCTGGGGATGCATCTGAAAGGCTTGTAGAATCTGACGAGCGGGTGGATCTGGAGGGAGACAATGATCCCGAGGAAACAATAGAAGAGGAGGTTGAGTATGAAGAAGTAGAGGAGGAGGAGGAAGTCGAGGTGGAAGAAGAGGAGGAAGAGGAAGAAGAAGATCCTGAAGAGGAGGGTGAGGAAGAGGATGACAACAAGCGACCTGCTACAAAATCTAATGCACAGAAAAGCTCAGATGGTGATGAAGAGATGATTGTTGCTGATGCGGAGGACGAGGAGGAGAAAAGGAAGCATGTTGAGCTTCTTGCTCGTCCTCCGCATGGGTCAGAGGTGTATCTTGGTGGCATTCCTCATGATGCATCCGAAGTGGATTTGAGGGGATTTTGTGAATCTATTGGGGAAGTGACTGAGGTTAGAATAATGAAGGGAAAAGATTCTGGTGAGGCCAAAGGCTATGCTTTTGTAACCTTCAGAAACAAAGAATTGGCCTCTAAGGCAATTGAGGAACTGAATAATTCGGAGTTAAAGGGAAAAAGGATTAAATGTTCGACATCTCAAGCAAAGCATCGGTTGTTCATCGGAAATGTTCCAAGAAGTTGGGGAGAGGAAGATATGAAGAAGGCTGTAACAGATATTGGACCAGGAGTCATTTCTGTGGAATTGTTGAAGGACCCACAGAACTCCAGCCGAAATCGGGGATTTGCGTTCATCGAGTATTATAATCATGCCTGTGCAGAATACTCAAGACAAAAGATGTCAACCCCAAAATTTAAGCTTGACACCAATGCTCCAACTGTTAGCTGGGCTGATCCTAGAAATACAGAATCCTCTGCTGCTTCTCAGGTTAGGGCAGTGTATGTCAAGAATTTACCAAAAGACATTACTCAGGATCAGCTGAAGGATCTGTTTGAACATCATGGAAAGATCACAAAGGTGGTTCTCCCACCTGCAAAAGCGGGACAGGAAAAGAGCAGATTTGGTTTTGTGCACTTTGCGGAAAGGGCATGTGCCATGAAGGCATTGAAGAACACTGAAAAATATGAAATTGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAACCACAATCAGATCAGAAGTCTTCTGGATCATCAACTCAACAACGGTCAGCCTTACTTCCGACCTACCCACCACGTTTTGGTTATGGCATGGTAGGGGGTAGTCCTTATGGTGGTGGCTTAGGTGCTGGATATGGTGGTCCGGGAATTGCGCAACCACTGATATACGGTAGGGGACCAACTCCTGCTGGCATGGCAATGATGCCTATGCTTTTACCTGACGGAAGGATTGGATATGTCCTGCAACAGCCGGGAGTACAACCACAGATGCCTCCACTGCAATCCCGAGGTGGAAGAAGTGGTGGTGGTGGCAGCTCAAGTGGTGGAAGGCAAAGCGGTGAGAGCAGTCGTGGCCGCATTCGCTACAACCCGTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016553 GO:0016554 GO:0030895 GO:0031647 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050821 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0090304 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

493

Amino Acids

54.06

Weight (kDa)

4.9

Isoelectric Point (pI)

62.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	119 - 189	1.3e-17	RNA recognition motif
RRM_1	PF00076	199 - 264	3.8e-08	RNA recognition motif
RRM_1	PF00076	293 - 362	1.4e-16	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	744
AarI	CACCTGC	1 cut(s)	979
Acc16I	TGCGCA	1 cut(s)	1254
Acc36I	ACCTGC	2 cut(s)	235, 979
AccB7I	CCANNNNNTGG	1 cut(s)	1181
AccBSI	CCGCTC	1 cut(s)	64
AciI	CCGC	7 cut(s)	64, 290, 341, 980, 1019, 1437, 1456
AclWI	GGATC	7 cut(s)	78, 83, 179, 827, 921, 933, 1138
AcoI	YGGCCR	1 cut(s)	1453
AcsI	RAATTY	2 cut(s)	791, 889
AcuI	CTGAAG	3 cut(s)	210, 478, 941
AfaI	GTAC	1 cut(s)	1359
AfiI	CCNNNNNNNGG	4 cut(s)	344, 718, 1181, 1214
AgsI	TTSAA	3 cut(s)	691, 935, 1048
AhdI	GACNNNNNGTC	1 cut(s)	668
AjnI	CCWGG	1 cut(s)	664
AleI	CACNNNNGTG	1 cut(s)	956
AloI	GAACNNNNNNTCC	2 cut(s)	553, 585
AluBI	AGCT	6 cut(s)	255, 325, 799, 825, 919, 1416
AluI	AGCT	6 cut(s)	255, 325, 799, 825, 919, 1416
Alw21I	GWGCWC	1 cut(s)	1014
Alw26I	GTCTC	1 cut(s)	75
Alw44I	GTGCAC	1 cut(s)	1010
AlwI	GGATC	7 cut(s)	78, 83, 179, 827, 921, 933, 1138
Ama87I	CYCGRG	2 cut(s)	92, 1386
AoxI	GGCC	3 cut(s)	468, 510, 1453
ApaLI	GTGCAC	1 cut(s)	1010
ApeKI	GCWGC	2 cut(s)	857, 1413
ApoI	RAATTY	2 cut(s)	791, 889
Asp700I	GAANNNNTTC	1 cut(s)	457
AspLEI	GCGC	1 cut(s)	1255
AspS9I	GGNCC	4 cut(s)	662, 694, 1241, 1277
AsuC2I	CCSGG	2 cut(s)	1245, 1353
AsuHPI	GGTGA	4 cut(s)	212, 275, 476, 1451
AvaI	CYCGRG	2 cut(s)	92, 1386
AvaII	GGWCC	4 cut(s)	662, 694, 1241, 1277
BaeGI	GKGCMC	1 cut(s)	1014
BbsI	GAAGAC	1 cut(s)	1116
Bbv12I	GWGCWC	1 cut(s)	1014
BbvI	GCAGC	2 cut(s)	844, 1425
BccI	CCATC	2 cut(s)	254, 1067
BciT130I	CCWGG	1 cut(s)	666
BcnI	CCSGG	2 cut(s)	1245, 1353
BcoDI	GTCTC	1 cut(s)	75
BfaI	CTAG	1 cut(s)	837
BfuAI	ACCTGC	2 cut(s)	235, 979
BglI	GCCNNNNNGGC	2 cut(s)	518, 1040
BisI	GCNGC	3 cut(s)	858, 1414, 1456
BlsI	GCNGC	3 cut(s)	859, 1415, 1457
Bme1390I	CCNGG	3 cut(s)	666, 1245, 1353
Bme18I	GGWCC	4 cut(s)	662, 694, 1241, 1277
BmeRI	GACNNNNNGTC	1 cut(s)	668
BmeT110I	CYCGRG	2 cut(s)	92, 1386
BmgT120I	GGNCC	4 cut(s)	662, 694, 1241, 1277
BmiI	GGNNCC	2 cut(s)	696, 1278
BmrFI	CCNGG	3 cut(s)	666, 1245, 1353
BmsI	GCATC	8 cut(s)	22, 44, 277, 370, 392, 598, 1293, 1359
BpiI	GAAGAC	1 cut(s)	1116
BpmI	CTGGAG	2 cut(s)	95, 691
Bpu10I	CCTNAGC	1 cut(s)	1222
BpuEI	CTTGAG	3 cut(s)	564, 751, 1402
BpuMI	CCSGG	2 cut(s)	1245, 1353
BsaJI	CCNNGG	2 cut(s)	93, 1387
BsaXI	ACNNNNNCTCC	4 cut(s)	104, 134, 796, 826
Bsc4I	CCNNNNNNNGG	4 cut(s)	344, 718, 1181, 1214
Bse3DI	GCAATG	1 cut(s)	1305
BseBI	CCWGG	1 cut(s)	666
BseDI	CCNNGG	2 cut(s)	93, 1387
BseGI	GGATG	3 cut(s)	37, 217, 383
BseLI	CCNNNNNNNGG	4 cut(s)	344, 718, 1181, 1214
BseMI	GCAATG	1 cut(s)	1305
BseMII	CTCAG	4 cut(s)	270, 423, 878, 923
BseRI	GAGGAG	8 cut(s)	125, 149, 152, 155, 179, 209, 314, 317
BseSI	GKGCMC	1 cut(s)	1014
BseXI	GCAGC	2 cut(s)	844, 1425
BseYI	CCCAGC	1 cut(s)	825
BsgI	GTGCAG	1 cut(s)	777
BshFI	GGCC	3 cut(s)	470, 512, 1455
BsiHKAI	GWGCWC	1 cut(s)	1014
BsiHKCI	CYCGRG	2 cut(s)	92, 1386
BsiSI	CCGG	2 cut(s)	1244, 1352
BslFI	GGGAC	2 cut(s)	996, 1290
BslI	CCNNNNNNNGG	4 cut(s)	344, 718, 1181, 1214
BsmAI	GTCTC	1 cut(s)	75
BsmFI	GGGAC	2 cut(s)	996, 1290
BsmI	GAATGC	2 cut(s)	369, 1458
BsnI	GGCC	3 cut(s)	470, 512, 1455
BsoBI	CYCGRG	2 cut(s)	92, 1386
Bsp1286I	GDGCHC	1 cut(s)	1014
Bsp143I	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
BspACI	CCGC	7 cut(s)	64, 290, 341, 980, 1019, 1437, 1456
BspANI	GGCC	3 cut(s)	470, 512, 1455
BspCNI	CTCAG	4 cut(s)	269, 424, 877, 922
BspHI	TCATGA	1 cut(s)	376
BspLI	GGNNCC	2 cut(s)	696, 1278
BspMI	ACCTGC	2 cut(s)	235, 979
BspPI	GGATC	7 cut(s)	78, 83, 179, 827, 921, 933, 1138
BsrBI	CCGCTC	1 cut(s)	64
BsrDI	GCAATG	1 cut(s)	1305
BssECI	CCNNGG	2 cut(s)	93, 1387
BssMI	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
Bst2UI	CCWGG	1 cut(s)	666
Bst4CI	ACNGT	3 cut(s)	820, 1149, 1271
Bst6I	CTCTTC	6 cut(s)	102, 156, 165, 186, 201, 264
BstC8I	GCNNGC	1 cut(s)	1291
BstDEI	CTNAG	6 cut(s)	256, 432, 516, 864, 909, 1222
BstF5I	GGATG	3 cut(s)	37, 217, 383
BstHHI	GCGC	1 cut(s)	1255
BstKTI	GATC	9 cut(s)	73, 91, 187, 835, 916, 928, 951, 1117, 1133
BstMAI	GTCTC	1 cut(s)	75
BstMBI	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
BstMWI	GCNNNNNNNGC	9 cut(s)	322, 518, 1025, 1040, 1295, 1378, 1443, 1452, 1461
BstNI	CCWGG	1 cut(s)	666
BstNSI	RCATGY	2 cut(s)	320, 1032
BstSCI	CCNGG	3 cut(s)	664, 1243, 1351
BstSLI	GKGCMC	1 cut(s)	1014
BstV1I	GCAGC	2 cut(s)	844, 1425
BstV2I	GAAGAC	1 cut(s)	1116
BstX2I	RGATCY	3 cut(s)	70, 184, 925
BstXI	CCANNNNNNTGG	1 cut(s)	621
BstYI	RGATCY	3 cut(s)	70, 184, 925
BsuRI	GGCC	3 cut(s)	470, 512, 1455
BtsCI	GGATG	3 cut(s)	37, 217, 383
BtsI	GCAGTG	2 cut(s)	882, 1376
BtsIMutI	CAGTG	4 cut(s)	882, 1053, 1259, 1376
BveI	ACCTGC	2 cut(s)	235, 979
Cac8I	GCNNGC	1 cut(s)	1291
CciI	TCATGA	1 cut(s)	376
CfoI	GCGC	1 cut(s)	1255
Cfr13I	GGNCC	4 cut(s)	662, 694, 1241, 1277
Csp6I	GTAC	1 cut(s)	1358
CviAII	CATG	9 cut(s)	317, 344, 377, 749, 941, 1029, 1036, 1192, 1294
CviQI	GTAC	1 cut(s)	1358
DdeI	CTNAG	6 cut(s)	256, 432, 516, 864, 909, 1222
DpnI	GATC	9 cut(s)	72, 90, 186, 834, 915, 927, 950, 1116, 1132
DpnII	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
DriI	GACNNNNNGTC	1 cut(s)	668
EaeI	YGGCCR	1 cut(s)	1453
Eam1104I	CTCTTC	6 cut(s)	102, 156, 165, 186, 201, 264
Eam1105I	GACNNNNNGTC	1 cut(s)	668
EarI	CTCTTC	6 cut(s)	102, 156, 165, 186, 201, 264
Eco47I	GGWCC	4 cut(s)	662, 694, 1241, 1277
Eco57I	CTGAAG	3 cut(s)	210, 478, 941
Eco88I	CYCGRG	2 cut(s)	92, 1386
EcoO109I	RGGNCCY	1 cut(s)	694
EcoRII	CCWGG	1 cut(s)	664
EcoT22I	ATGCAT	2 cut(s)	37, 385
FaeI	CATG	9 cut(s)	320, 347, 380, 752, 944, 1032, 1039, 1195, 1297
FaqI	GGGAC	2 cut(s)	996, 1290
FatI	CATG	9 cut(s)	316, 343, 376, 748, 940, 1028, 1035, 1191, 1293
FauI	CCCGC	2 cut(s)	57, 973
Fnu4HI	GCNGC	3 cut(s)	858, 1414, 1456
FokI	GGATG	3 cut(s)	44, 224, 370
Fsp4HI	GCNGC	3 cut(s)	858, 1414, 1456
FspBI	CTAG	1 cut(s)	837
FspI	TGCGCA	1 cut(s)	1254
GlaI	GCGC	1 cut(s)	1254
GluI	GCNGC	3 cut(s)	858, 1414, 1456
GsaI	CCCAGC	1 cut(s)	829
GsuI	CTGGAG	2 cut(s)	95, 691
HaeIII	GGCC	3 cut(s)	470, 512, 1455
HapII	CCGG	2 cut(s)	1244, 1352
HhaI	GCGC	1 cut(s)	1255
Hin1II	CATG	9 cut(s)	320, 347, 380, 752, 944, 1032, 1039, 1195, 1297
Hin6I	GCGC	1 cut(s)	1253
HinP1I	GCGC	1 cut(s)	1253
HincII	GTYRAC	1 cut(s)	783
HindII	GTYRAC	1 cut(s)	783
HindIII	AAGCTT	1 cut(s)	797
HinfI	GANTC	5 cut(s)	53, 413, 458, 669, 848
HpaII	CCGG	2 cut(s)	1244, 1352
HphI	GGTGA	4 cut(s)	212, 275, 476, 1451
Hpy166II	GTNNAC	2 cut(s)	783, 1012
Hpy188III	TCNNGA	9 cut(s)	74, 92, 188, 377, 768, 886, 911, 1128, 1386
Hpy8I	GTNNAC	2 cut(s)	783, 1012
HpyAV	CCTTC	8 cut(s)	442, 502, 637, 685, 916, 1033, 1320, 1422
HpyCH4III	ACNGT	3 cut(s)	820, 1149, 1271
HpyCH4IV	ACGT	1 cut(s)	1177
HpyCH4V	TGCA	9 cut(s)	35, 245, 383, 758, 974, 1012, 1100, 1345, 1381
HpyF10VI	GCNNNNNNNGC	9 cut(s)	322, 518, 1025, 1040, 1295, 1378, 1443, 1452, 1461
HpyF3I	CTNAG	6 cut(s)	256, 432, 516, 864, 909, 1222
HpySE526I	ACGT	1 cut(s)	1177
Hsp92II	CATG	9 cut(s)	320, 347, 380, 752, 944, 1032, 1039, 1195, 1297
HspAI	GCGC	1 cut(s)	1253
Kzo9I	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
LmnI	GCTCC	1 cut(s)	817
Lsp1109I	GCAGC	2 cut(s)	844, 1425
LweI	GCATC	8 cut(s)	22, 44, 277, 370, 392, 598, 1293, 1359
MaeI	CTAG	1 cut(s)	837
MaeII	ACGT	1 cut(s)	1177
MaeIII	GTNAC	3 cut(s)	427, 487, 649
MalI	GATC	9 cut(s)	72, 90, 186, 834, 915, 927, 950, 1116, 1132
MbiI	CCGCTC	1 cut(s)	64
MboI	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
MfeI	CAATTG	1 cut(s)	522
MflI	RGATCY	3 cut(s)	70, 184, 925
MhlI	GDGCHC	1 cut(s)	1014
MluCI	AATT	8 cut(s)	506, 522, 538, 683, 791, 889, 1068, 1248
MlyI	GAGTC	1 cut(s)	678
MmeI	TCCRAC	2 cut(s)	839, 1187
Mph1103I	ATGCAT	2 cut(s)	37, 385
MroXI	GAANNNNTTC	1 cut(s)	457
MseI	TTAA	4 cut(s)	548, 564, 795, 1477
MslI	CAYNNNNRTG	4 cut(s)	677, 753, 956, 1298
MspA1I	CMGCKG	1 cut(s)	919
MspI	CCGG	2 cut(s)	1244, 1352
MspR9I	CCNGG	3 cut(s)	666, 1245, 1353
MunI	CAATTG	1 cut(s)	522
Mva1269I	GAATGC	2 cut(s)	369, 1458
MvaI	CCWGG	1 cut(s)	666
MwoI	GCNNNNNNNGC	9 cut(s)	322, 518, 1025, 1040, 1295, 1378, 1443, 1452, 1461
NciI	CCSGG	2 cut(s)	1245, 1353
NdeII	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
NlaIII	CATG	9 cut(s)	320, 347, 380, 752, 944, 1032, 1039, 1195, 1297
NlaIV	GGNNCC	2 cut(s)	696, 1278
NmuCI	GTSAC	1 cut(s)	427
NsbI	TGCGCA	1 cut(s)	1254
NsiI	ATGCAT	2 cut(s)	37, 385
NspI	RCATGY	2 cut(s)	320, 1032
OliI	CACNNNNGTG	1 cut(s)	956
PagI	TCATGA	1 cut(s)	376
PaqCI	CACCTGC	1 cut(s)	979
PctI	GAATGC	2 cut(s)	369, 1458
PdmI	GAANNNNTTC	1 cut(s)	457
PfeI	GAWTC	4 cut(s)	53, 413, 458, 848
PflMI	CCANNNNNTGG	1 cut(s)	1181
PfoI	TCCNGGA	1 cut(s)	1243
PkrI	GCNGC	3 cut(s)	859, 1415, 1457
PleI	GAGTC	1 cut(s)	677
PpsI	GAGTC	1 cut(s)	677
PpuMI	RGGWCCY	1 cut(s)	694
PsiI	TTATAA	1 cut(s)	744
Psp5II	RGGWCCY	1 cut(s)	694
Psp6I	CCWGG	1 cut(s)	664
PspFI	CCCAGC	1 cut(s)	825
PspGI	CCWGG	1 cut(s)	664
PspN4I	GGNNCC	2 cut(s)	696, 1278
PspPI	GGNCC	4 cut(s)	662, 694, 1241, 1277
PspPPI	RGGWCCY	1 cut(s)	694
PsuI	RGATCY	3 cut(s)	70, 184, 925
PvuII	CAGCTG	1 cut(s)	919
RsaI	GTAC	1 cut(s)	1359
RsaNI	GTAC	1 cut(s)	1358
RseI	CAYNNNNRTG	4 cut(s)	677, 753, 956, 1298
SaqAI	TTAA	4 cut(s)	548, 564, 795, 1477
SatI	GCNGC	3 cut(s)	858, 1414, 1456
Sau3AI	GATC	9 cut(s)	70, 88, 184, 832, 913, 925, 948, 1114, 1130
Sau96I	GGNCC	4 cut(s)	662, 694, 1241, 1277
SchI	GAGTC	1 cut(s)	678
ScrFI	CCNGG	3 cut(s)	666, 1245, 1353
SduI	GDGCHC	1 cut(s)	1014
SfaNI	GCATC	8 cut(s)	22, 44, 277, 370, 392, 598, 1293, 1359
SinI	GGWCC	4 cut(s)	662, 694, 1241, 1277
SmiMI	CAYNNNNRTG	4 cut(s)	677, 753, 956, 1298
SmlI	CTYRAG	3 cut(s)	579, 766, 1417
SmoI	CTYRAG	3 cut(s)	579, 766, 1417
Sse9I	AATT	8 cut(s)	506, 522, 538, 683, 791, 889, 1068, 1248
SsiI	CCGC	7 cut(s)	64, 290, 341, 980, 1019, 1437, 1456
SspMI	CTAG	1 cut(s)	837
StyD4I	CCNGG	3 cut(s)	664, 1243, 1351
TaaI	ACNGT	3 cut(s)	820, 1149, 1271
TaiI	ACGT	1 cut(s)	1180
TaqI	TCGA	3 cut(s)	150, 572, 735
TasI	AATT	8 cut(s)	506, 522, 538, 683, 791, 889, 1068, 1248
TatI	WGTACW	1 cut(s)	1357
TauI	GCSGC	1 cut(s)	1458
TfiI	GAWTC	4 cut(s)	53, 413, 458, 848
Tru1I	TTAA	4 cut(s)	548, 564, 795, 1477
Tru9I	TTAA	4 cut(s)	548, 564, 795, 1477
TscAI	CASTG	4 cut(s)	882, 1060, 1266, 1383
TseFI	GTSAC	1 cut(s)	427
TseI	GCWGC	2 cut(s)	857, 1413
Tsp45I	GTSAC	1 cut(s)	427
TspDTI	ATGAA	8 cut(s)	138, 282, 461, 589, 653, 721, 1052, 1080
TspGWI	ACGGA	1 cut(s)	1338
TspRI	CASTG	4 cut(s)	882, 1060, 1266, 1383
Van91I	CCANNNNNTGG	1 cut(s)	1181
VneI	GTGCAC	1 cut(s)	1010
VpaK11BI	GGWCC	4 cut(s)	662, 694, 1241, 1277
XapI	RAATTY	2 cut(s)	791, 889
XceI	RCATGY	2 cut(s)	320, 1032
XcmI	CCANNNNNNNNNTGG	1 cut(s)	822
XmnI	GAANNNNTTC	1 cut(s)	457
XspI	CTAG	1 cut(s)	837
Zsp2I	ATGCAT	2 cut(s)	37, 385

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.