Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Reverse (-)

40206662 .. 40214418

Gene Structure 7757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ32292

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

ATGCCAAGGGAAAAGACAAATGCTTCATCAGTTGAACCTGAAAAGTCAATAGCATCTGATGAGAAGGTTGGTATTGATGAAGACAATGATCCTGATGAGGCAATGGATGAAGAGGTTGAGTATGAAGAGGTTGAGGAAGAAGAAGAAGTAGAAGAAATAGAAGAAGAAGTGGAAGAAGAAGAGGAAGAAGAGGAGGAAGAGGAAGAAGAGGAGGTAGAAGAAGAGGTGGATGATGAAGATGCTAATATTGCCTCTGGAACTGATGTCAAGAACTCAGAGAGCAGTGAAGAGGAGAAGAAAAAACATGCTGAACTTCTTGCCCTTCCTCCACATGGTTCTGAAGTTTACATTGGTGGTATTCCTCATGATGCTATGCAGGAGGAGTTAAGGGTCTTTTGTGAAGCTGTAGGAGAAGTTACAGAGGTTCGGATTATGAAGGGAAAGGATTTAGGTGACAATAAGGGCTTTGCATTTGTGACGTTCAGAAACATGGAGATGGCTTCTAATGCTATTGATGAATTGAATAATACCGAATTTAAGGGTAAAAGAATAAAATGTTCAACTTCTAAAGCAAAGCACCGTTTGTTCATCGGTAATGTTCCAAGGAGTTGGGGAGAAGAAGATCTGAGGAAGGTTGTGATGGAGGTTGGTCCTGGAGTTTCTGGTATAGAACTGGTCAAGGATATGAAGAACACAAGCAATAACCGGGGGTTTGCTTTCATTGACTACTATAACCATGCATGTGCTGACTATTCAAGGCAAAAAATGATGGACTCCAAATTTAAGCTGGATAATAATGCCCCAACAGTGAGCTGGGCAGACCCTAAAAACGCCGAGTCTTCTGCTGCTTCTCAGGTGAAGGCGGTTTATGTAAAGAATTTACCCAAAACTGTGACGCAAGAACAGTTAAAGAAGCTATTTGAACACCACGGGAAAATCATGAAAGTGGTTCTGCCAGCTTCAAAATCCGGACAGGAGAGGAATAGAATTGGTTTTGTACATTTTTCAGAGAGGTCAAGTGCTATGAAAGCATTGAAGAACACTGAAAATTATGAACTTGATGGCCAGCTGTTGGAGTGCTCTCTTGCAAGGCCACAGGCAGATCAAAAGTCCGGTGGATCGAATTCCCAGAGGTCAGGGTTGATTGCCAGTTATCCAGCTCGTGCTCTTTATGGTGTGCCTGGGGGTGCCTATGGGGCTCTTGGTGCAGGATATGGTGCTGCAGGTTTTGCACAGCCTTTGATGCCTGGACCAGGACCGGCTCCTGCTGGCATGGCAATGATGCCGATGCTTCTGCCTGATGGACGGATTGGATATGTTTTGCAACAACCAGGGCCTCAGCCATACCCACACCCACACCCACACCCGCACCCGCACCCGCACCCACACCCACACCCACACACGCCGCATGCACATCAGCGAAATAGTGGCCGGGGTGGTGGCGGGAGCGGTAGCAAGAGTAGTGGTGGTTCAAATAAGGGAAGGCACAACCATGATGCTGGGCATGGGCGCAGGTTTCACCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071310 GO:0071345 GO:0071346 GO:0071704 GO:0080090 GO:0090304 GO:0097452 GO:1901360 GO:1902369 GO:1902373 GO:1902494 GO:1903311 GO:1903312 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

509

Amino Acids

56.0

Weight (kDa)

5.14

Isoelectric Point (pI)

52.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	115 - 185	9.7e-18	RNA recognition motif
RRM_1	PF00076	195 - 261	9.3e-09	RNA recognition motif
RRM_10	PF22976	287 - 354	5.9e-06	RRM domain
RRM_1	PF00076	289 - 358	6.2e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1214, 1503
AccB1I	GGYRCC	1 cut(s)	1187
AccB7I	CCANNNNNTGG	1 cut(s)	1072
AccBSI	CCGCTC	1 cut(s)	1449
AccIII	TCCGGA	1 cut(s)	968
AciI	CCGC	7 cut(s)	863, 1367, 1373, 1379, 1406, 1443, 1449
AclWI	GGATC	2 cut(s)	83, 1126
AcoI	YGGCCR	2 cut(s)	1063, 1429
AcsI	RAATTY	4 cut(s)	533, 779, 877, 1123
AcuI	CTGAAG	1 cut(s)	360
AfaI	GTAC	1 cut(s)	999
AfiI	CCNNNNNNNGG	3 cut(s)	332, 1072, 1253
AgsI	TTSAA	8 cut(s)	35, 523, 561, 756, 923, 963, 1036, 1473
AjnI	CCWGG	5 cut(s)	652, 1180, 1246, 1252, 1330
AjuI	GAANNNNNNNTTGG	2 cut(s)	333, 365
AluBI	AGCT	7 cut(s)	404, 787, 813, 916, 959, 1069, 1160
AluI	AGCT	7 cut(s)	404, 787, 813, 916, 959, 1069, 1160
Alw21I	GWGCWC	2 cut(s)	1082, 1168
AlwI	GGATC	2 cut(s)	83, 1126
Aor13HI	TCCGGA	1 cut(s)	968
AoxI	GGCC	4 cut(s)	1063, 1091, 1334, 1429
ApeKI	GCWGC	2 cut(s)	845, 1220
ApoI	RAATTY	4 cut(s)	533, 779, 877, 1123
AspLEI	GCGC	1 cut(s)	1512
AspS9I	GGNCC	4 cut(s)	650, 1250, 1256, 1334
AsuC2I	CCSGG	2 cut(s)	707, 1433
AsuHPI	GGTGA	3 cut(s)	464, 868, 1511
AvaII	GGWCC	3 cut(s)	650, 1250, 1256
BalI	TGGCCA	1 cut(s)	1065
BanI	GGYRCC	1 cut(s)	1187
BanII	GRGCYC	1 cut(s)	1201
BauI	CACGAG	1 cut(s)	1161
BbsI	GAAGAC	2 cut(s)	87, 831
Bbv12I	GWGCWC	2 cut(s)	1082, 1168
BbvCI	CCTCAGC	1 cut(s)	1338
BbvI	GCAGC	2 cut(s)	832, 1207
BccI	CCATC	5 cut(s)	490, 634, 763, 1055, 1295
BcgI	CGANNNNNNTGC	4 cut(s)	824, 858, 1276, 1310
BciT130I	CCWGG	5 cut(s)	654, 1182, 1248, 1254, 1332
BcnI	CCSGG	2 cut(s)	707, 1433
BfmI	CTRYAG	2 cut(s)	405, 1221
BfuAI	ACCTGC	2 cut(s)	1214, 1503
BglI	GCCNNNNNGGC	1 cut(s)	1196
BglII	AGATCT	1 cut(s)	622
BisI	GCNGC	3 cut(s)	846, 1221, 1406
BlsI	GCNGC	3 cut(s)	847, 1222, 1407
Bme1390I	CCNGG	7 cut(s)	654, 707, 1182, 1248, 1254, 1332, 1433
Bme18I	GGWCC	3 cut(s)	650, 1250, 1256
BmgT120I	GGNCC	4 cut(s)	650, 1250, 1256, 1334
BmiI	GGNNCC	2 cut(s)	1189, 1263
BmrFI	CCNGG	7 cut(s)	654, 707, 1182, 1248, 1254, 1332, 1433
BmsI	GCATC	7 cut(s)	62, 229, 358, 1233, 1272, 1278, 1486
BpiI	GAAGAC	2 cut(s)	87, 831
BpmI	CTGGAG	1 cut(s)	675
Bpu10I	CCTNAGC	1 cut(s)	1338
BpuMI	CCSGG	2 cut(s)	707, 1433
BsaJI	CCNNGG	7 cut(s)	5, 602, 706, 928, 1181, 1331, 1432
BsaWI	WCCGGW	2 cut(s)	968, 1112
Bsc4I	CCNNNNNNNGG	3 cut(s)	332, 1072, 1253
Bse118I	RCCGGY	1 cut(s)	1258
Bse1I	ACTGG	2 cut(s)	678, 1149
Bse3DI	GCAATG	2 cut(s)	108, 1284
BseAI	TCCGGA	1 cut(s)	968
BseBI	CCWGG	5 cut(s)	654, 1182, 1248, 1254, 1332
BseDI	CCNNGG	7 cut(s)	5, 602, 706, 928, 1181, 1331, 1432
BseGI	GGATG	2 cut(s)	112, 235
BseLI	CCNNNNNNNGG	3 cut(s)	332, 1072, 1253
BseMI	GCAATG	2 cut(s)	108, 1284
BseMII	CTCAG	4 cut(s)	288, 617, 866, 1352
BseNI	ACTGG	2 cut(s)	678, 1149
BseRI	GAGGAG	4 cut(s)	206, 224, 305, 395
BseXI	GCAGC	2 cut(s)	832, 1207
BseYI	CCCAGC	2 cut(s)	813, 1499
BsgI	GTGCAG	1 cut(s)	1227
BshFI	GGCC	4 cut(s)	1065, 1093, 1336, 1431
BshNI	GGYRCC	1 cut(s)	1187
BsiHKAI	GWGCWC	2 cut(s)	1082, 1168
BsiSI	CCGG	5 cut(s)	706, 969, 1113, 1259, 1432
BslI	CCNNNNNNNGG	3 cut(s)	332, 1072, 1253
BsnI	GGCC	4 cut(s)	1065, 1093, 1336, 1431
Bsp1286I	GDGCHC	3 cut(s)	1082, 1168, 1201
Bsp13I	TCCGGA	1 cut(s)	968
Bsp1407I	TGTACA	1 cut(s)	997
Bsp143I	GATC	4 cut(s)	88, 622, 1102, 1118
BspACI	CCGC	7 cut(s)	863, 1367, 1373, 1379, 1406, 1443, 1449
BspANI	GGCC	4 cut(s)	1065, 1093, 1336, 1431
BspCNI	CTCAG	4 cut(s)	287, 618, 865, 1351
BspEI	TCCGGA	1 cut(s)	968
BspHI	TCATGA	2 cut(s)	364, 939
BspLI	GGNNCC	2 cut(s)	1189, 1263
BspMAI	CTGCAG	1 cut(s)	1225
BspMI	ACCTGC	2 cut(s)	1214, 1503
BspPI	GGATC	2 cut(s)	83, 1126
BspT107I	GGYRCC	1 cut(s)	1187
BsrBI	CCGCTC	1 cut(s)	1449
BsrDI	GCAATG	2 cut(s)	108, 1284
BsrFI	RCCGGY	1 cut(s)	1258
BsrGI	TGTACA	1 cut(s)	997
BsrI	ACTGG	2 cut(s)	678, 1149
BssAI	RCCGGY	1 cut(s)	1258
BssECI	CCNNGG	7 cut(s)	5, 602, 706, 928, 1181, 1331, 1432
BssMI	GATC	4 cut(s)	88, 622, 1102, 1118
BssSI	CACGAG	1 cut(s)	1161
BssT1I	CCWWGG	2 cut(s)	5, 602
Bst2BI	CACGAG	1 cut(s)	1161
Bst2UI	CCWGG	5 cut(s)	654, 1182, 1248, 1254, 1332
Bst4CI	ACNGT	4 cut(s)	581, 808, 892, 906
Bst6I	CTCTTC	8 cut(s)	105, 120, 174, 183, 192, 201, 216, 282
BstAPI	GCANNNNNTGC	1 cut(s)	1229
BstAUI	TGTACA	1 cut(s)	997
BstC8I	GCNNGC	4 cut(s)	957, 1067, 1270, 1410
BstDEI	CTNAG	4 cut(s)	274, 626, 852, 1338
BstDSI	CCRYGG	1 cut(s)	928
BstENI	CCTNNNNNAGG	1 cut(s)	1251
BstF5I	GGATG	2 cut(s)	112, 235
BstHHI	GCGC	1 cut(s)	1512
BstKTI	GATC	4 cut(s)	91, 625, 1105, 1121
BstMBI	GATC	4 cut(s)	88, 622, 1102, 1118
BstMWI	GCNNNNNNNGC	8 cut(s)	248, 506, 1028, 1196, 1205, 1229, 1243, 1274
BstNI	CCWGG	5 cut(s)	654, 1182, 1248, 1254, 1332
BstNSI	RCATGY	3 cut(s)	308, 744, 1412
BstSCI	CCNGG	7 cut(s)	652, 705, 1180, 1246, 1252, 1330, 1431
BstSFI	CTRYAG	2 cut(s)	405, 1221
BstV1I	GCAGC	2 cut(s)	832, 1207
BstV2I	GAAGAC	2 cut(s)	87, 831
BstX2I	RGATCY	1 cut(s)	622
BstXI	CCANNNNNNTGG	2 cut(s)	609, 1499
BstYI	RGATCY	1 cut(s)	622
BsuRI	GGCC	4 cut(s)	1065, 1093, 1336, 1431
BtgI	CCRYGG	1 cut(s)	928
BtsCI	GGATG	2 cut(s)	112, 235
BtsI	GCAGTG	1 cut(s)	289
BtsIMutI	CAGTG	3 cut(s)	289, 813, 1041
BveI	ACCTGC	2 cut(s)	1214, 1503
Cac8I	GCNNGC	4 cut(s)	957, 1067, 1270, 1410
CciI	TCATGA	2 cut(s)	364, 939
CfoI	GCGC	1 cut(s)	1512
Cfr10I	RCCGGY	1 cut(s)	1258
Cfr13I	GGNCC	4 cut(s)	650, 1250, 1256, 1334
CseI	GACGC	1 cut(s)	904
Csp6I	GTAC	1 cut(s)	998
CspCI	CAANNNNNGTGG	2 cut(s)	1444, 1479
CviQI	GTAC	1 cut(s)	998
DdeI	CTNAG	4 cut(s)	274, 626, 852, 1338
DpnI	GATC	4 cut(s)	90, 624, 1104, 1120
DpnII	GATC	4 cut(s)	88, 622, 1102, 1118
EaeI	YGGCCR	2 cut(s)	1063, 1429
Eam1104I	CTCTTC	8 cut(s)	105, 120, 174, 183, 192, 201, 216, 282
EarI	CTCTTC	8 cut(s)	105, 120, 174, 183, 192, 201, 216, 282
Eco130I	CCWWGG	2 cut(s)	5, 602
Eco24I	GRGCYC	1 cut(s)	1201
Eco47I	GGWCC	3 cut(s)	650, 1250, 1256
Eco57I	CTGAAG	1 cut(s)	360
EcoNI	CCTNNNNNAGG	1 cut(s)	1251
EcoO109I	RGGNCCY	1 cut(s)	1334
EcoRI	GAATTC	1 cut(s)	1123
EcoRII	CCWGG	5 cut(s)	652, 1180, 1246, 1252, 1330
EcoT14I	CCWWGG	2 cut(s)	5, 602
EcoT22I	ATGCAT	1 cut(s)	742
EcoT38I	GRGCYC	1 cut(s)	1201
ErhI	CCWWGG	2 cut(s)	5, 602
FauI	CCCGC	4 cut(s)	1374, 1380, 1386, 1436
Fnu4HI	GCNGC	3 cut(s)	846, 1221, 1406
FokI	GGATG	2 cut(s)	119, 242
FriOI	GRGCYC	1 cut(s)	1201
Fsp4HI	GCNGC	3 cut(s)	846, 1221, 1406
GlaI	GCGC	1 cut(s)	1511
GluI	GCNGC	3 cut(s)	846, 1221, 1406
GsaI	CCCAGC	2 cut(s)	817, 1503
GsuI	CTGGAG	1 cut(s)	675
HaeIII	GGCC	4 cut(s)	1065, 1093, 1336, 1431
HapII	CCGG	5 cut(s)	706, 969, 1113, 1259, 1432
HgaI	GACGC	1 cut(s)	904
HhaI	GCGC	1 cut(s)	1512
Hin6I	GCGC	1 cut(s)	1510
HinP1I	GCGC	1 cut(s)	1510
HinfI	GANTC	2 cut(s)	773, 836
HpaII	CCGG	5 cut(s)	706, 969, 1113, 1259, 1432
HphI	GGTGA	3 cut(s)	464, 868, 1511
Hpy166II	GTNNAC	1 cut(s)	346
Hpy188I	TCNGA	7 cut(s)	58, 277, 340, 429, 485, 627, 1009
Hpy188III	TCNNGA	6 cut(s)	92, 255, 268, 365, 940, 969
Hpy8I	GTNNAC	1 cut(s)	346
HpyAV	CCTTC	6 cut(s)	58, 332, 430, 625, 853, 1476
HpyCH4III	ACNGT	4 cut(s)	581, 808, 892, 906
HpyCH4IV	ACGT	1 cut(s)	479
HpyCH4V	TGCA	9 cut(s)	376, 470, 740, 1088, 1208, 1223, 1232, 1324, 1412
HpyF10VI	GCNNNNNNNGC	8 cut(s)	248, 506, 1028, 1196, 1205, 1229, 1243, 1274
HpyF3I	CTNAG	4 cut(s)	274, 626, 852, 1338
HpySE526I	ACGT	1 cut(s)	479
HspAI	GCGC	1 cut(s)	1510
Kpn2I	TCCGGA	1 cut(s)	968
Kzo9I	GATC	4 cut(s)	88, 622, 1102, 1118
LmnI	GCTCC	2 cut(s)	1267, 1446
Lsp1109I	GCAGC	2 cut(s)	832, 1207
LweI	GCATC	7 cut(s)	62, 229, 358, 1233, 1272, 1278, 1486
MaeII	ACGT	1 cut(s)	479
MaeIII	GTNAC	4 cut(s)	415, 452, 475, 892
MalI	GATC	4 cut(s)	90, 624, 1104, 1120
MbiI	CCGCTC	1 cut(s)	1449
MboI	GATC	4 cut(s)	88, 622, 1102, 1118
MflI	RGATCY	1 cut(s)	622
MhlI	GDGCHC	3 cut(s)	1082, 1168, 1201
MlsI	TGGCCA	1 cut(s)	1065
MluCI	AATT	7 cut(s)	518, 533, 779, 877, 987, 1048, 1123
MluNI	TGGCCA	1 cut(s)	1065
MlyI	GAGTC	2 cut(s)	767, 845
MmeI	TCCRAC	1 cut(s)	1053
Mox20I	TGGCCA	1 cut(s)	1065
Mph1103I	ATGCAT	1 cut(s)	742
MroI	TCCGGA	1 cut(s)	968
MscI	TGGCCA	1 cut(s)	1065
MseI	TTAA	4 cut(s)	386, 537, 783, 908
MslI	CAYNNNNRTG	5 cut(s)	494, 741, 944, 1277, 1491
Msp20I	TGGCCA	1 cut(s)	1065
MspA1I	CMGCKG	1 cut(s)	1069
MspI	CCGG	5 cut(s)	706, 969, 1113, 1259, 1432
MspR9I	CCNGG	7 cut(s)	654, 707, 1182, 1248, 1254, 1332, 1433
MvaI	CCWGG	5 cut(s)	654, 1182, 1248, 1254, 1332
MwoI	GCNNNNNNNGC	8 cut(s)	248, 506, 1028, 1196, 1205, 1229, 1243, 1274
NciI	CCSGG	2 cut(s)	707, 1433
NdeII	GATC	4 cut(s)	88, 622, 1102, 1118
NlaIV	GGNNCC	2 cut(s)	1189, 1263
NmeAIII	GCCGAG	1 cut(s)	859
NmuCI	GTSAC	3 cut(s)	452, 475, 892
NsiI	ATGCAT	1 cut(s)	742
NspI	RCATGY	3 cut(s)	308, 744, 1412
PaeI	GCATGC	1 cut(s)	1412
PagI	TCATGA	2 cut(s)	364, 939
PflMI	CCANNNNNTGG	1 cut(s)	1072
PfoI	TCCNGGA	1 cut(s)	652
PkrI	GCNGC	3 cut(s)	847, 1222, 1407
PleI	GAGTC	2 cut(s)	767, 844
PpsI	GAGTC	2 cut(s)	767, 844
Psp6I	CCWGG	5 cut(s)	652, 1180, 1246, 1252, 1330
PspFI	CCCAGC	2 cut(s)	813, 1499
PspGI	CCWGG	5 cut(s)	652, 1180, 1246, 1252, 1330
PspN4I	GGNNCC	2 cut(s)	1189, 1263
PspPI	GGNCC	4 cut(s)	650, 1250, 1256, 1334
PsrI	GAACNNNNNNTAC	2 cut(s)	1453, 1485
PstI	CTGCAG	1 cut(s)	1225
PsuI	RGATCY	1 cut(s)	622
PvuII	CAGCTG	1 cut(s)	1069
RsaI	GTAC	1 cut(s)	999
RsaNI	GTAC	1 cut(s)	998
RseI	CAYNNNNRTG	5 cut(s)	494, 741, 944, 1277, 1491
SaqAI	TTAA	4 cut(s)	386, 537, 783, 908
SatI	GCNGC	3 cut(s)	846, 1221, 1406
Sau3AI	GATC	4 cut(s)	88, 622, 1102, 1118
Sau96I	GGNCC	4 cut(s)	650, 1250, 1256, 1334
SchI	GAGTC	2 cut(s)	767, 845
ScrFI	CCNGG	7 cut(s)	654, 707, 1182, 1248, 1254, 1332, 1433
SduI	GDGCHC	3 cut(s)	1082, 1168, 1201
SfaNI	GCATC	7 cut(s)	62, 229, 358, 1233, 1272, 1278, 1486
SfcI	CTRYAG	2 cut(s)	405, 1221
SinI	GGWCC	3 cut(s)	650, 1250, 1256
SmiMI	CAYNNNNRTG	5 cut(s)	494, 741, 944, 1277, 1491
SphI	GCATGC	1 cut(s)	1412
Sse9I	AATT	7 cut(s)	518, 533, 779, 877, 987, 1048, 1123
SsiI	CCGC	7 cut(s)	863, 1367, 1373, 1379, 1406, 1443, 1449
SspI	AATATT	1 cut(s)	247
StyD4I	CCNGG	7 cut(s)	652, 705, 1180, 1246, 1252, 1330, 1431
StyI	CCWWGG	2 cut(s)	5, 602
TaaI	ACNGT	4 cut(s)	581, 808, 892, 906
TaiI	ACGT	1 cut(s)	482
TaqI	TCGA	1 cut(s)	1121
TasI	AATT	7 cut(s)	518, 533, 779, 877, 987, 1048, 1123
TatI	WGTACW	1 cut(s)	997
TauI	GCSGC	1 cut(s)	1408
Tru1I	TTAA	4 cut(s)	386, 537, 783, 908
Tru9I	TTAA	4 cut(s)	386, 537, 783, 908
TscAI	CASTG	3 cut(s)	289, 813, 1048
TseFI	GTSAC	3 cut(s)	452, 475, 892
TseI	GCWGC	2 cut(s)	845, 1220
Tsp45I	GTSAC	3 cut(s)	452, 475, 892
TspGWI	ACGGA	1 cut(s)	1321
TspRI	CASTG	3 cut(s)	289, 813, 1048
Van91I	CCANNNNNTGG	1 cut(s)	1072
VpaK11BI	GGWCC	3 cut(s)	650, 1250, 1256
XagI	CCTNNNNNAGG	1 cut(s)	1251
XapI	RAATTY	4 cut(s)	533, 779, 877, 1123
XceI	RCATGY	3 cut(s)	308, 744, 1412
XcmI	CCANNNNNNNNNTGG	2 cut(s)	784, 810
Zsp2I	ATGCAT	1 cut(s)	742

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.