Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0001105

Physical Location & Seq

Genomic Coordinates Forward (+)

52912998 .. 52920760

Gene Structure 7763 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00036280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGCCAAGGGAAAAGACAAATGCTTCATCAGTTGAACCTGAAAAGTCAATAGCATCTGATGAGAAGGTTGGTATTGATGAAGACAATGATCCTGATGAGGCAATGGATGAAGAGGTTGAGTATGAAGAGGTTGAGGAAGAAGAAGAAGTAGAAGAAATAGAAGAAGAAGTGGAAGAAGAAGAGGAAGAAGAGGAGGAAGAGGAAGAAGAGGAGGAGGTAGAAGAAGAGGTGGATGATGAAGATGCTAATATTGCCACTGGAACTGATGTCAAGAACTCAGAGAGCAGTGAAGAGGAGAAGAAAAAACATGCTGAACTTCTTGCCCTTCCTCCACATGGTTCTGAAGTTTACATTGGTGGTATTCCTCATGATGCTATTCAGGAGGAGTTAAAGGTCTTTTGTGAAGCTGTAGGAGAAGTTACAGAGGTTCGGATTATGAAGGGAAAAGATTTAGGTGACAATAAGGGCTTTGCATTTGTGACATTCAGAGACATGGAGATGGCTTCTAATGCTATTGATGAATTGAATAATACCGAATTTAAGGGTAAAAGAATAAAATGTTCAACATCTAAAGCAAAGCACCGTTTGTTCATCGGTAATGTTCCAAGGAGTTGGGGAGAAGAAGATCTGAGGAAGGTTGTGATGGAGGTTGGTCCTGGAGTTTCTGGTATAGAACTGGTCAAGGATATGAAGAACACAAGCAATAACCGGGGGTTTGCTTTCATTGACTACTATAACCACGCCTGTGCTGACTATTCAAGGCAAAAAATGATGGACTCAAAATTTAAGCTGGATAATAATGCCCCAACAGTGAGCTGGGCAGACCCTAAAAACGCTGAGTCTTCTGCTGCTTCTCAGGTGAAGGCGGTTTATGTAAAGAATTTACCCAAAACTGTGACCCAAGAACAGTTAAAGAAGCTATTTGAACACCACGGGAAAATCACGAAAGTGGTTCTGCCAGCTTCAAAATCCGGACAGGAGAGGAATAGAATTGGTTTTGTACATTTTTCAGAGAGGTCAAGTGCTATGAAAGCATTGAAGAACACTGAAAATTATGAACTTGATGGCCAGCTGTTGGAGTGCTCTCTTGCAAGGCCACAGGCAGATCAAAAGTCTGGTGGATCGAATTCCCAGAGGTCAGGGTTGATTGCTAGTTATCCAGCTCGTGCTGTTTATGGTGTGCCTGGGGGTGCCTATGGGGCTCTTGGTGCAGGATATGGTGCTGCAGGTTTTGCACAGCCTTTGATGCCTGGACCAGGACCGGCTCCTGCTGGCATGGCAATGATGCCAATGCTTCTGCCTGATGGACGGATTGGATATGTTTTGCAACAACCAGGGCCTCAGCCATACCAACACCCACACCCACACCCGCACCCGCACCCGCACCCACACACCCCGCATGCACATCAGCGAAATAGTGGCCGGGGTGGTGGTGGGAGCGGTAGCAAGAGTAGTGGTGGTTCAAATAAGGGAAGGCACAACCATGATGCTGGGCATGGGCGCAGGTATCACCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0002376 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006417 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0008150 GO:0008152 GO:0008380 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009987 GO:0010033 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010628 GO:0010629 GO:0016070 GO:0016071 GO:0017148 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031329 GO:0031330 GO:0032268 GO:0032269 GO:0032991 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034641 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043487 GO:0043488 GO:0043489 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045934 GO:0046483 GO:0048255 GO:0048518 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051252 GO:0051253 GO:0051716 GO:0060255 GO:0061013 GO:0065007 GO:0065008 GO:0070887 GO:0070934 GO:0070937 GO:0071013 GO:0071204 GO:0071310 GO:0071345 GO:0071346 GO:0071704 GO:0080090 GO:0090304 GO:0097452 GO:1901360 GO:1902369 GO:1902373 GO:1902494 GO:1903311 GO:1903312 GO:1990904 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RRM_1 bZIP_2

Protein Analysis

506

Amino Acids

55.63

Weight (kDa)

5.03

Isoelectric Point (pI)

51.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	116 - 186	1.8e-17	RNA recognition motif
RRM_1	PF00076	196 - 262	9.2e-09	RNA recognition motif
RRM_10	PF22976	288 - 355	5.1e-06	RRM domain
RRM_1	PF00076	290 - 359	3.7e-15	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G52660 AT3G52660 AT3G52660 AT5G28390
fragaria_vesca	FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_3g24960 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900 FvH4_6g18900
malus_domestica	MD11G1164700.v1.1 MD12G1025200.v1.1 MD14G1023900.v1.1
prunus_persica	Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.6G130600_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1 Prupe.7G108900_v2.0.a1
pyrus_communis	pycom11g13700 pycom14g02300
rosa_chinensis	RchiOBHm_Chr3g0473891 RchiOBHm_Chr5g0044751
rosa_laevigata	RLG00000023975 RLG00000034296
rosa_multiflora	Rmu_sc0000228.1_g000015 Rmu_sc0002414.1_g000043
rosa_roxburghii	Rroxscaffold_1G00036280 Rroxscaffold_6G00407690
rosa_rugosa	Rorug03G0136400 Rorug03G0136500 Rorug03G0136600 Rorug05G0217300 Rorug05G0217400 Rorug05G0217500 Rorug05G0217600 Rorug05G0217700
rosa_samantha	Rh3AG186900 Rh3BG215500 Rh3CG212200 Rh3DG211400 Rh5AG300700 Rh5BG307400 Rh5CG334500 Rh5DG317500
rosa_wichuraiana	Rw3G017090 Rw5G027820 Rw5G027860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1217, 1494
AccB1I	GGYRCC	1 cut(s)	1190
AccB7I	CCANNNNNTGG	1 cut(s)	1075
AccBSI	CCGCTC	1 cut(s)	1440
AccIII	TCCGGA	1 cut(s)	971
AciI	CCGC	6 cut(s)	866, 1370, 1376, 1382, 1397, 1440
AclWI	GGATC	2 cut(s)	83, 1129
AcoI	YGGCCR	2 cut(s)	1066, 1420
AcsI	RAATTY	4 cut(s)	536, 782, 880, 1126
AcuI	CTGAAG	1 cut(s)	363
AfaI	GTAC	1 cut(s)	1002
AfiI	CCNNNNNNNGG	3 cut(s)	335, 1075, 1256
AgsI	TTSAA	8 cut(s)	35, 526, 564, 759, 926, 966, 1039, 1464
AjnI	CCWGG	5 cut(s)	655, 1183, 1249, 1255, 1333
AjuI	GAANNNNNNNTTGG	2 cut(s)	336, 368
AleI	CACNNNNGTG	2 cut(s)	744, 947
AluBI	AGCT	7 cut(s)	407, 790, 816, 919, 962, 1072, 1163
AluI	AGCT	7 cut(s)	407, 790, 816, 919, 962, 1072, 1163
Alw21I	GWGCWC	1 cut(s)	1085
Alw26I	GTCTC	1 cut(s)	483
AlwI	GGATC	2 cut(s)	83, 1129
Aor13HI	TCCGGA	1 cut(s)	971
AoxI	GGCC	4 cut(s)	1066, 1094, 1337, 1420
ApeKI	GCWGC	2 cut(s)	848, 1223
ApoI	RAATTY	4 cut(s)	536, 782, 880, 1126
AspLEI	GCGC	1 cut(s)	1503
AspS9I	GGNCC	4 cut(s)	653, 1253, 1259, 1337
AsuC2I	CCSGG	2 cut(s)	710, 1424
AsuHPI	GGTGA	3 cut(s)	467, 871, 1502
AvaII	GGWCC	3 cut(s)	653, 1253, 1259
BalI	TGGCCA	1 cut(s)	1068
BanI	GGYRCC	1 cut(s)	1190
BanII	GRGCYC	1 cut(s)	1204
BauI	CACGAG	1 cut(s)	1164
BbsI	GAAGAC	2 cut(s)	87, 834
Bbv12I	GWGCWC	1 cut(s)	1085
BbvCI	CCTCAGC	1 cut(s)	1341
BbvI	GCAGC	2 cut(s)	835, 1210
BccI	CCATC	5 cut(s)	493, 637, 766, 1058, 1298
BciT130I	CCWGG	5 cut(s)	657, 1185, 1251, 1257, 1335
BcnI	CCSGG	2 cut(s)	710, 1424
BcoDI	GTCTC	1 cut(s)	483
BfaI	CTAG	1 cut(s)	1152
BfmI	CTRYAG	2 cut(s)	408, 1224
BfuAI	ACCTGC	2 cut(s)	1217, 1494
BglI	GCCNNNNNGGC	1 cut(s)	1199
BglII	AGATCT	1 cut(s)	625
BisI	GCNGC	2 cut(s)	849, 1224
BlsI	GCNGC	2 cut(s)	850, 1225
Bme1390I	CCNGG	7 cut(s)	657, 710, 1185, 1251, 1257, 1335, 1424
Bme18I	GGWCC	3 cut(s)	653, 1253, 1259
BmgT120I	GGNCC	4 cut(s)	653, 1253, 1259, 1337
BmiI	GGNNCC	2 cut(s)	1192, 1266
BmrFI	CCNGG	7 cut(s)	657, 710, 1185, 1251, 1257, 1335, 1424
BmsI	GCATC	6 cut(s)	62, 232, 361, 1236, 1275, 1477
BpiI	GAAGAC	2 cut(s)	87, 834
BpmI	CTGGAG	1 cut(s)	678
Bpu10I	CCTNAGC	1 cut(s)	1341
BpuMI	CCSGG	2 cut(s)	710, 1424
BsaJI	CCNNGG	7 cut(s)	5, 605, 709, 931, 1184, 1334, 1423
BsaWI	WCCGGW	1 cut(s)	971
Bsc4I	CCNNNNNNNGG	3 cut(s)	335, 1075, 1256
Bse118I	RCCGGY	1 cut(s)	1261
Bse1I	ACTGG	2 cut(s)	262, 681
Bse3DI	GCAATG	2 cut(s)	108, 1287
BseAI	TCCGGA	1 cut(s)	971
BseBI	CCWGG	5 cut(s)	657, 1185, 1251, 1257, 1335
BseDI	CCNNGG	7 cut(s)	5, 605, 709, 931, 1184, 1334, 1423
BseGI	GGATG	2 cut(s)	112, 238
BseLI	CCNNNNNNNGG	3 cut(s)	335, 1075, 1256
BseMI	GCAATG	2 cut(s)	108, 1287
BseMII	CTCAG	5 cut(s)	291, 620, 828, 869, 1355
BseNI	ACTGG	2 cut(s)	262, 681
BseRI	GAGGAG	5 cut(s)	206, 224, 227, 308, 398
BseXI	GCAGC	2 cut(s)	835, 1210
BseYI	CCCAGC	2 cut(s)	816, 1490
BsgI	GTGCAG	1 cut(s)	1230
BshFI	GGCC	4 cut(s)	1068, 1096, 1339, 1422
BshNI	GGYRCC	1 cut(s)	1190
BsiHKAI	GWGCWC	1 cut(s)	1085
BsiSI	CCGG	4 cut(s)	709, 972, 1262, 1423
BslI	CCNNNNNNNGG	3 cut(s)	335, 1075, 1256
BsmAI	GTCTC	1 cut(s)	483
BsnI	GGCC	4 cut(s)	1068, 1096, 1339, 1422
Bsp1286I	GDGCHC	2 cut(s)	1085, 1204
Bsp13I	TCCGGA	1 cut(s)	971
Bsp1407I	TGTACA	1 cut(s)	1000
Bsp143I	GATC	4 cut(s)	88, 625, 1105, 1121
BspACI	CCGC	6 cut(s)	866, 1370, 1376, 1382, 1397, 1440
BspANI	GGCC	4 cut(s)	1068, 1096, 1339, 1422
BspCNI	CTCAG	5 cut(s)	290, 621, 829, 868, 1354
BspEI	TCCGGA	1 cut(s)	971
BspHI	TCATGA	1 cut(s)	367
BspLI	GGNNCC	2 cut(s)	1192, 1266
BspMAI	CTGCAG	1 cut(s)	1228
BspMI	ACCTGC	2 cut(s)	1217, 1494
BspPI	GGATC	2 cut(s)	83, 1129
BspT107I	GGYRCC	1 cut(s)	1190
BsrBI	CCGCTC	1 cut(s)	1440
BsrDI	GCAATG	2 cut(s)	108, 1287
BsrFI	RCCGGY	1 cut(s)	1261
BsrGI	TGTACA	1 cut(s)	1000
BsrI	ACTGG	2 cut(s)	262, 681
BssAI	RCCGGY	1 cut(s)	1261
BssECI	CCNNGG	7 cut(s)	5, 605, 709, 931, 1184, 1334, 1423
BssMI	GATC	4 cut(s)	88, 625, 1105, 1121
BssSI	CACGAG	1 cut(s)	1164
BssT1I	CCWWGG	2 cut(s)	5, 605
Bst2BI	CACGAG	1 cut(s)	1164
Bst2UI	CCWGG	5 cut(s)	657, 1185, 1251, 1257, 1335
Bst4CI	ACNGT	4 cut(s)	584, 811, 895, 909
Bst6I	CTCTTC	8 cut(s)	105, 120, 174, 183, 192, 201, 219, 285
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstAUI	TGTACA	1 cut(s)	1000
BstC8I	GCNNGC	4 cut(s)	960, 1070, 1273, 1401
BstDEI	CTNAG	5 cut(s)	277, 629, 837, 855, 1341
BstDSI	CCRYGG	1 cut(s)	931
BstENI	CCTNNNNNAGG	1 cut(s)	1254
BstF5I	GGATG	2 cut(s)	112, 238
BstHHI	GCGC	1 cut(s)	1503
BstKTI	GATC	4 cut(s)	91, 628, 1108, 1124
BstMAI	GTCTC	1 cut(s)	483
BstMBI	GATC	4 cut(s)	88, 625, 1105, 1121
BstMWI	GCNNNNNNNGC	8 cut(s)	251, 509, 1031, 1199, 1208, 1232, 1246, 1277
BstNI	CCWGG	5 cut(s)	657, 1185, 1251, 1257, 1335
BstNSI	RCATGY	2 cut(s)	311, 1403
BstSCI	CCNGG	7 cut(s)	655, 708, 1183, 1249, 1255, 1333, 1422
BstSFI	CTRYAG	2 cut(s)	408, 1224
BstV1I	GCAGC	2 cut(s)	835, 1210
BstV2I	GAAGAC	2 cut(s)	87, 834
BstX2I	RGATCY	1 cut(s)	625
BstXI	CCANNNNNNTGG	2 cut(s)	612, 1490
BstYI	RGATCY	1 cut(s)	625
BsuRI	GGCC	4 cut(s)	1068, 1096, 1339, 1422
BtgI	CCRYGG	1 cut(s)	931
BtsCI	GGATG	2 cut(s)	112, 238
BtsI	GCAGTG	1 cut(s)	292
BtsIMutI	CAGTG	4 cut(s)	255, 292, 816, 1044
BveI	ACCTGC	2 cut(s)	1217, 1494
Cac8I	GCNNGC	4 cut(s)	960, 1070, 1273, 1401
CciI	TCATGA	1 cut(s)	367
CfoI	GCGC	1 cut(s)	1503
Cfr10I	RCCGGY	1 cut(s)	1261
Cfr13I	GGNCC	4 cut(s)	653, 1253, 1259, 1337
Csp6I	GTAC	1 cut(s)	1001
CspCI	CAANNNNNGTGG	2 cut(s)	1435, 1470
CviAII	CATG	8 cut(s)	308, 335, 368, 493, 1276, 1400, 1484, 1496
CviQI	GTAC	1 cut(s)	1001
DdeI	CTNAG	5 cut(s)	277, 629, 837, 855, 1341
DpnI	GATC	4 cut(s)	90, 627, 1107, 1123
DpnII	GATC	4 cut(s)	88, 625, 1105, 1121
EaeI	YGGCCR	2 cut(s)	1066, 1420
Eam1104I	CTCTTC	8 cut(s)	105, 120, 174, 183, 192, 201, 219, 285
EarI	CTCTTC	8 cut(s)	105, 120, 174, 183, 192, 201, 219, 285
Eco130I	CCWWGG	2 cut(s)	5, 605
Eco24I	GRGCYC	1 cut(s)	1204
Eco47I	GGWCC	3 cut(s)	653, 1253, 1259
Eco57I	CTGAAG	1 cut(s)	363
EcoNI	CCTNNNNNAGG	1 cut(s)	1254
EcoO109I	RGGNCCY	1 cut(s)	1337
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	5 cut(s)	655, 1183, 1249, 1255, 1333
EcoT14I	CCWWGG	2 cut(s)	5, 605
EcoT38I	GRGCYC	1 cut(s)	1204
ErhI	CCWWGG	2 cut(s)	5, 605
FaeI	CATG	8 cut(s)	311, 338, 371, 496, 1279, 1403, 1487, 1499
FatI	CATG	8 cut(s)	307, 334, 367, 492, 1275, 1399, 1483, 1495
FauI	CCCGC	4 cut(s)	1377, 1383, 1389, 1404
Fnu4HI	GCNGC	2 cut(s)	849, 1224
FokI	GGATG	2 cut(s)	119, 245
FriOI	GRGCYC	1 cut(s)	1204
Fsp4HI	GCNGC	2 cut(s)	849, 1224
FspBI	CTAG	1 cut(s)	1152
GlaI	GCGC	1 cut(s)	1502
GluI	GCNGC	2 cut(s)	849, 1224
GsaI	CCCAGC	2 cut(s)	820, 1494
GsuI	CTGGAG	1 cut(s)	678
HaeIII	GGCC	4 cut(s)	1068, 1096, 1339, 1422
HapII	CCGG	4 cut(s)	709, 972, 1262, 1423
HhaI	GCGC	1 cut(s)	1503
Hin1II	CATG	8 cut(s)	311, 338, 371, 496, 1279, 1403, 1487, 1499
Hin6I	GCGC	1 cut(s)	1501
HinP1I	GCGC	1 cut(s)	1501
HinfI	GANTC	2 cut(s)	776, 839
HpaII	CCGG	4 cut(s)	709, 972, 1262, 1423
HphI	GGTGA	3 cut(s)	467, 871, 1502
Hpy166II	GTNNAC	1 cut(s)	349
Hpy188I	TCNGA	7 cut(s)	58, 280, 343, 432, 488, 630, 1012
Hpy188III	TCNNGA	6 cut(s)	92, 271, 368, 380, 943, 972
Hpy8I	GTNNAC	1 cut(s)	349
HpyAV	CCTTC	6 cut(s)	58, 335, 433, 628, 856, 1467
HpyCH4III	ACNGT	4 cut(s)	584, 811, 895, 909
HpyCH4V	TGCA	7 cut(s)	473, 1091, 1211, 1226, 1235, 1327, 1403
HpyF10VI	GCNNNNNNNGC	8 cut(s)	251, 509, 1031, 1199, 1208, 1232, 1246, 1277
HpyF3I	CTNAG	5 cut(s)	277, 629, 837, 855, 1341
Hsp92II	CATG	8 cut(s)	311, 338, 371, 496, 1279, 1403, 1487, 1499
HspAI	GCGC	1 cut(s)	1501
Kpn2I	TCCGGA	1 cut(s)	971
Kzo9I	GATC	4 cut(s)	88, 625, 1105, 1121
LmnI	GCTCC	2 cut(s)	1270, 1437
Lsp1109I	GCAGC	2 cut(s)	835, 1210
LweI	GCATC	6 cut(s)	62, 232, 361, 1236, 1275, 1477
MaeI	CTAG	1 cut(s)	1152
MaeIII	GTNAC	4 cut(s)	418, 455, 478, 895
MalI	GATC	4 cut(s)	90, 627, 1107, 1123
MbiI	CCGCTC	1 cut(s)	1440
MboI	GATC	4 cut(s)	88, 625, 1105, 1121
MflI	RGATCY	1 cut(s)	625
MhlI	GDGCHC	2 cut(s)	1085, 1204
MlsI	TGGCCA	1 cut(s)	1068
MluCI	AATT	7 cut(s)	521, 536, 782, 880, 990, 1051, 1126
MluNI	TGGCCA	1 cut(s)	1068
MlyI	GAGTC	2 cut(s)	770, 848
MmeI	TCCRAC	1 cut(s)	1056
Mox20I	TGGCCA	1 cut(s)	1068
MroI	TCCGGA	1 cut(s)	971
MscI	TGGCCA	1 cut(s)	1068
MseI	TTAA	4 cut(s)	389, 540, 786, 911
MslI	CAYNNNNRTG	5 cut(s)	497, 744, 947, 1280, 1482
Msp20I	TGGCCA	1 cut(s)	1068
MspA1I	CMGCKG	1 cut(s)	1072
MspI	CCGG	4 cut(s)	709, 972, 1262, 1423
MspR9I	CCNGG	7 cut(s)	657, 710, 1185, 1251, 1257, 1335, 1424
MvaI	CCWGG	5 cut(s)	657, 1185, 1251, 1257, 1335
MwoI	GCNNNNNNNGC	8 cut(s)	251, 509, 1031, 1199, 1208, 1232, 1246, 1277
NciI	CCSGG	2 cut(s)	710, 1424
NdeII	GATC	4 cut(s)	88, 625, 1105, 1121
NlaIII	CATG	8 cut(s)	311, 338, 371, 496, 1279, 1403, 1487, 1499
NlaIV	GGNNCC	2 cut(s)	1192, 1266
NmuCI	GTSAC	3 cut(s)	455, 478, 895
NspI	RCATGY	2 cut(s)	311, 1403
OliI	CACNNNNGTG	2 cut(s)	744, 947
PaeI	GCATGC	1 cut(s)	1403
PagI	TCATGA	1 cut(s)	367
PflMI	CCANNNNNTGG	1 cut(s)	1075
PfoI	TCCNGGA	1 cut(s)	655
PkrI	GCNGC	2 cut(s)	850, 1225
PleI	GAGTC	2 cut(s)	770, 847
PpsI	GAGTC	2 cut(s)	770, 847
Psp6I	CCWGG	5 cut(s)	655, 1183, 1249, 1255, 1333
PspFI	CCCAGC	2 cut(s)	816, 1490
PspGI	CCWGG	5 cut(s)	655, 1183, 1249, 1255, 1333
PspN4I	GGNNCC	2 cut(s)	1192, 1266
PspPI	GGNCC	4 cut(s)	653, 1253, 1259, 1337
PsrI	GAACNNNNNNTAC	2 cut(s)	1444, 1476
PstI	CTGCAG	1 cut(s)	1228
PsuI	RGATCY	1 cut(s)	625
PvuII	CAGCTG	1 cut(s)	1072
RsaI	GTAC	1 cut(s)	1002
RsaNI	GTAC	1 cut(s)	1001
RseI	CAYNNNNRTG	5 cut(s)	497, 744, 947, 1280, 1482
SaqAI	TTAA	4 cut(s)	389, 540, 786, 911
SatI	GCNGC	2 cut(s)	849, 1224
Sau3AI	GATC	4 cut(s)	88, 625, 1105, 1121
Sau96I	GGNCC	4 cut(s)	653, 1253, 1259, 1337
SchI	GAGTC	2 cut(s)	770, 848
ScrFI	CCNGG	7 cut(s)	657, 710, 1185, 1251, 1257, 1335, 1424
SduI	GDGCHC	2 cut(s)	1085, 1204
SfaNI	GCATC	6 cut(s)	62, 232, 361, 1236, 1275, 1477
SfcI	CTRYAG	2 cut(s)	408, 1224
SinI	GGWCC	3 cut(s)	653, 1253, 1259
SmiMI	CAYNNNNRTG	5 cut(s)	497, 744, 947, 1280, 1482
SphI	GCATGC	1 cut(s)	1403
Sse9I	AATT	7 cut(s)	521, 536, 782, 880, 990, 1051, 1126
SsiI	CCGC	6 cut(s)	866, 1370, 1376, 1382, 1397, 1440
SspI	AATATT	1 cut(s)	250
SspMI	CTAG	1 cut(s)	1152
StyD4I	CCNGG	7 cut(s)	655, 708, 1183, 1249, 1255, 1333, 1422
StyI	CCWWGG	2 cut(s)	5, 605
TaaI	ACNGT	4 cut(s)	584, 811, 895, 909
TaqI	TCGA	1 cut(s)	1124
TasI	AATT	7 cut(s)	521, 536, 782, 880, 990, 1051, 1126
TatI	WGTACW	1 cut(s)	1000
Tru1I	TTAA	4 cut(s)	389, 540, 786, 911
Tru9I	TTAA	4 cut(s)	389, 540, 786, 911
TscAI	CASTG	4 cut(s)	262, 292, 816, 1051
TseFI	GTSAC	3 cut(s)	455, 478, 895
TseI	GCWGC	2 cut(s)	848, 1223
Tsp45I	GTSAC	3 cut(s)	455, 478, 895
TspGWI	ACGGA	1 cut(s)	1324
TspRI	CASTG	4 cut(s)	262, 292, 816, 1051
Van91I	CCANNNNNTGG	1 cut(s)	1075
VpaK11BI	GGWCC	3 cut(s)	653, 1253, 1259
XagI	CCTNNNNNAGG	1 cut(s)	1254
XapI	RAATTY	4 cut(s)	536, 782, 880, 1126
XceI	RCATGY	2 cut(s)	311, 1403
XcmI	CCANNNNNNNNNTGG	1 cut(s)	813
XspI	CTAG	1 cut(s)	1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.