Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002584

Physical Location & Seq

Genomic Coordinates Reverse (-)

31507676 .. 31513521

Gene Structure 5846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g36790.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2433 bp

ATGATTTTTTCAAGGATTGGTCGCTCCTTATCTCGATCCTCTCGCTCCAGAAATTTGATTGGTCTGAATGGGCGATCGTCGGCGGCGGCTCTGAACGGTAATGGAGTACCGGGTTCGGGTTCGTATCTGGGTCGGGTCGATGGGGATTTAGGGTTTATGAGGTCGTATATTGCTTCGGCAATAGGAGCGCATAAGACCCATGTTTCTGATGTGAGTTACATTCTAGGGAACCCTAAATTTCTGAGACTGTTTTCCAGTGAAGCCCCAAAGAAAAAGAATTTTGAGAACTTCTATCCCAAGGAAAAGAAAGAGATTCCGAAAGGGGATGATCAGAAATCCGAGTCCAAAGACGGGTCAAGCACGGATGACCAGGGCAGTTTCCAGGAAGCTTTCATAAAGCAGTTCCAGAATTTAGTCCCTTTAGTATTGATCGGACTATTTTTCTCTTCCTTTTCTTTTAGCTCCAGTGATCAGAAACAGATAAGTTTTCAAGAGTTTAAGAACAAACTTCTGGAACCTGGTTTGGTTGATCATATAGTTGTTTCTAATAAATCAGTTGCGAAAGTATTTGTACGTAGCTCACCACGCAGTCAATCACGTGATGAAGTTGTTGAAGGAACTATTAATGGTAATGCTGCTCGGGGAAAAGGGGGCGAGTATAAATACTTTTTTAATATTGGAAGTGTTGATAATTTCGAGGAGAAGTTGGAGGATGCCCAGGAAGCTTTGGGGATAGATTCTCATGATTATGTTCCTGTTACATATGTCTCTGAAATGGTATGGTATCAAGAATTGATGAGGTTTGCACCAACATTAATCCTTCTGGGAACCCTCTTGTATATGGGGAGGAGAATGCAGGGTGGACTAGGCATTGGTGGTGGTTCTGGTGGCCGGAGTGGTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACAAAAGTAGATAAAAATGCAAAGAATAAGATCTACTTTAAAGATGTTGCCGGTTGTGATGAAGCAAAGCAAGAGATTATGGAATTTGTGCATTTCCTGAAGAACCCTAAAAAGTATGAGGATTTGGGAGCCAAAATTCCCAAAGGTGCTCTATTGGTAGGTCCACCAGGTACAGGAAAGACCCTTTTAGCTAAAGCAACTGCAGGGGAATCTGGTGTTCCTTTCCTATCTATATCCGGATCAGATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAGAAGCAAGGCAATGTGCTCCGAGTATTGTATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGGGGGCGTGGAGGCTTCTCAGGGTCCAATGATGAGCGTGAAAGCACTCTAAATCAATTGCTGGTAGAAATGGATGGCTTTGGAACAACTGCTGGGGTAGTTGTGCTTGCTGGCACCAATAGGCCTGATATTTTGGACAAAGCCTTACTAAGGCCTGGTCGATTTGATCGTCAGATTAGCATTGATAAACCGGATATCAAAGGTCGTGAACAGATATTTCAGATATACTTGAAAAAACTCAAACTTGATCAAGAACCATCATATTACTCTCAAAGGCTTGCAGCTCTGACTCCAGGATTTGCTGGAGCAGACATCGCCAATGTTTGTAATGAAGGTGCTTTAATTGCTGCCAGGAACGAAAGTCCAATAATCACGATGCAGCATTTTGAGTCGGCTATAGATAGGATAATTGGTGGTCTGGAAAAGAAGAACAGGGTTATTAGCAAGCTTGAACGCCGCACTGTTGCCTACCATGAGTCAGGGCATGCTGTTGCAGGATGGTTTTTAGAGCATGCAGAACCATTGTTAAAAGTGACCATTGTTCCTCGAGGGACAGCAGCACTCGGGTTCGCCCAGTATGTTCCTAATGAAAACCTCCTCATGACCAAGGAGCAGCTTTTTGATATGACTTGCATGACCCTTGGTGGTAGAGCAGCTGAACAGGTGATGTTGGGAAAAATTTCGACGGGAGCCCAAAACGATTTGGAAAAGGTGACAAAGATGACGTATGCCCAGGTTGCAGTTTATGGTTTTAGTGACAAGGTGGGTCTTCTTTCTTTCCCTCAAAGAGATGACGGGTTTGAGATGTCAAAGCCCTACAGCAGCAAGACTGCAGCCCTTATTGACGGTGAAGTACGCGAATGGGTTGGCAAGGCTTATGCACATACAGTTGCACTCCTAGAAGAACACAAAGATCAAGTGGCTCAAATTGCAGAATTGTTGCTAGAAAAGGAAGTTCTTCACCAAGATGACCTTCTCAGGGTTTTGGGAGAGAGACCATATAAGTCGAGCGAAGTGAGCAACTATGATAGATTTAAACAAGGTTTTGAAGATGAGAAAACTGTTGAGGCCCCTGTTAGTGTCGGGCGTGAGGAAGATGGCTCTTCACCTCTAGAGCCTCAGGTTCTCCCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0042221 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

811

Amino Acids

88.93

Weight (kDa)

6.93

Isoelectric Point (pI)

34.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	139 - 248	8.8e-14	FtsH Extracellular
AAA	PF00004	362 - 494	1.3e-42	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	524 - 562	6.8e-11	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07510 AT2G29080
fragaria_vesca	FvH4_3g36790 FvH4_3g36790 FvH4_3g36790 FvH4_6g13480 FvH4_6g13480 FvH4_6g13480
malus_domestica	MD03G1088300.v1.1 MD03G1088400.v1.1 MD04G1130900.v1.1 MD11G1097400.v1.1 MD12G1144000.v1.1
prunus_persica	Prupe.6G072600_v2.0.a1 Prupe.6G257400_v2.0.a1 Prupe.6G257400_v2.0.a1
pyrus_communis	pycom03g06980 pycom03g07000 pycom04g11920 pycom11g08210 pycom12g13860
rosa_chinensis	RchiOBHm_Chr3g0466351 RchiOBHm_Chr5g0065851
rosa_laevigata	RLG00000024582 RLG00000035821
rosa_multiflora	Rmu_sc0003480.1_g000012 Rmu_sc0042868.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015310 Rroxscaffold_6G00414550
rosa_rugosa	Rorug03G0081200 Rorug05G0374100 Rorug05G0374200 Rorug05G0374300
rosa_samantha	Rh3BG148900 Rh3DG149600 Rh5BG449200 Rh5CG471400 Rh5DG462800
rosa_wichuraiana	Rw3G012050 Rw5G040600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1842
AccB1I	GGYRCC	1 cut(s)	1409
AccII	CGCG	1 cut(s)	2154
AccIII	TCCGGA	1 cut(s)	1169
AciI	CCGC	3 cut(s)	83, 86, 1753
AclWI	GGATC	2 cut(s)	30, 1180
AcoI	YGGCCR	1 cut(s)	889
AcsI	RAATTY	7 cut(s)	52, 236, 277, 409, 1016, 1068, 1974
AcuI	CTGAAG	1 cut(s)	1052
AcvI	CACGTG	1 cut(s)	599
AfaI	GTAC	4 cut(s)	108, 573, 1105, 2151
AfiI	CCNNNNNNNGG	5 cut(s)	116, 351, 1106, 1446, 2275
AgsI	TTSAA	8 cut(s)	12, 491, 614, 913, 1232, 1528, 1748, 2345
AjnI	CCWGG	9 cut(s)	369, 381, 517, 717, 1099, 1450, 1588, 1646, 2028
AjuI	GAANNNNNNNTTGG	2 cut(s)	2253, 2285
AluBI	AGCT	9 cut(s)	389, 462, 579, 725, 1124, 1580, 1744, 1912, 1952
AluI	AGCT	9 cut(s)	389, 462, 579, 725, 1124, 1580, 1744, 1912, 1952
Alw21I	GWGCWC	2 cut(s)	1084, 1252
Alw26I	GTCTC	3 cut(s)	238, 772, 2284
AlwI	GGATC	2 cut(s)	30, 1180
Ama87I	CYCGRG	3 cut(s)	639, 1842, 1859
Aor13HI	TCCGGA	1 cut(s)	1169
AoxI	GGCC	4 cut(s)	889, 1418, 1448, 2364
ApeKI	GCWGC	9 cut(s)	635, 1577, 1643, 1675, 1853, 1909, 1949, 2118, 2129
ApoI	RAATTY	7 cut(s)	52, 236, 277, 409, 1016, 1068, 1974
AseI	ATTAAT	2 cut(s)	624, 815
Asp700I	GAANNNNTTC	2 cut(s)	1975, 2253
AspLEI	GCGC	1 cut(s)	190
AspS9I	GGNCC	4 cut(s)	1094, 1205, 1320, 2365
AsuC2I	CCSGG	1 cut(s)	111
AsuHPI	GGTGA	6 cut(s)	573, 1972, 2020, 2156, 2249, 2394
AvaI	CYCGRG	3 cut(s)	639, 1842, 1859
AvaII	GGWCC	3 cut(s)	1094, 1205, 1320
AxyI	CCTNAGG	1 cut(s)	2415
BanI	GGYRCC	1 cut(s)	1409
BanII	GRGCYC	1 cut(s)	1990
BbrPI	CACGTG	1 cut(s)	599
BbsI	GAAGAC	1 cut(s)	2057
Bbv12I	GWGCWC	2 cut(s)	1084, 1252
BbvI	GCAGC	9 cut(s)	622, 1589, 1630, 1687, 1865, 1921, 1961, 2130, 2141
BccI	CCATC	5 cut(s)	134, 1364, 1561, 1788, 2387
BciT130I	CCWGG	9 cut(s)	371, 383, 519, 719, 1101, 1452, 1590, 1648, 2030
BclI	TGATCA	4 cut(s)	328, 469, 529, 1543
BcnI	CCSGG	1 cut(s)	111
BcoDI	GTCTC	3 cut(s)	238, 772, 2284
BfaI	CTAG	5 cut(s)	224, 866, 2195, 2240, 2408
BfmI	CTRYAG	4 cut(s)	1134, 1692, 2113, 2127
BglII	AGATCT	1 cut(s)	963
Bme18I	GGWCC	3 cut(s)	1094, 1205, 1320
BmeT110I	CYCGRG	3 cut(s)	639, 1842, 1859
BmgT120I	GGNCC	4 cut(s)	1094, 1205, 1320, 2365
BmiI	GGNNCC	8 cut(s)	230, 516, 829, 1063, 1321, 1411, 1987, 2367
BmrI	ACTGGG	1 cut(s)	1864
BmsI	GCATC	3 cut(s)	703, 1270, 1662
BmuI	ACTGGG	1 cut(s)	1864
BpiI	GAAGAC	1 cut(s)	2057
BpmI	CTGGAG	4 cut(s)	31, 448, 1572, 1620
BpuMI	CCSGG	1 cut(s)	111
BsaAI	YACGTR	2 cut(s)	575, 599
BsaI	GGTCTC	1 cut(s)	2284
BsaJI	CCNNGG	6 cut(s)	297, 370, 717, 1902, 1936, 2028
BsaWI	WCCGGW	2 cut(s)	1169, 1486
BsaXI	ACNNNNNCTCC	2 cut(s)	886, 916
Bsc4I	CCNNNNNNNGG	5 cut(s)	116, 351, 1106, 1446, 2275
Bse118I	RCCGGY	1 cut(s)	983
Bse1I	ACTGG	3 cut(s)	255, 465, 1870
Bse21I	CCTNAGG	1 cut(s)	2415
Bse3DI	GCAATG	1 cut(s)	1250
BseAI	TCCGGA	1 cut(s)	1169
BseBI	CCWGG	9 cut(s)	371, 383, 519, 719, 1101, 1452, 1590, 1648, 2030
BseDI	CCNNGG	6 cut(s)	297, 370, 717, 1902, 1936, 2028
BseGI	GGATG	5 cut(s)	331, 370, 718, 1375, 1799
BseLI	CCNNNNNNNGG	5 cut(s)	116, 351, 1106, 1446, 2275
BseMI	GCAATG	1 cut(s)	1250
BseMII	CTCAG	4 cut(s)	233, 1329, 2287, 2429
BseNI	ACTGG	3 cut(s)	255, 465, 1870
BseRI	GAGGAG	3 cut(s)	713, 862, 1883
BseXI	GCAGC	9 cut(s)	622, 1589, 1630, 1687, 1865, 1921, 1961, 2130, 2141
BseYI	CCCAGC	1 cut(s)	1388
Bsh1236I	CGCG	1 cut(s)	2154
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	4 cut(s)	891, 1420, 1450, 2366
BshNI	GGYRCC	1 cut(s)	1409
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	2 cut(s)	1084, 1252
BsiHKCI	CYCGRG	3 cut(s)	639, 1842, 1859
BsiSI	CCGG	5 cut(s)	110, 892, 984, 1170, 1487
BslFI	GGGAC	2 cut(s)	401, 1861
BslI	CCNNNNNNNGG	5 cut(s)	116, 351, 1106, 1446, 2275
BsmAI	GTCTC	3 cut(s)	238, 772, 2284
BsmFI	GGGAC	2 cut(s)	401, 1861
BsmI	GAATGC	1 cut(s)	858
BsnI	GGCC	4 cut(s)	891, 1420, 1450, 2366
Bso31I	GGTCTC	1 cut(s)	2284
BsoBI	CYCGRG	3 cut(s)	639, 1842, 1859
Bsp1286I	GDGCHC	3 cut(s)	1084, 1252, 1990
Bsp13I	TCCGGA	1 cut(s)	1169
BspACI	CCGC	3 cut(s)	83, 86, 1753
BspANI	GGCC	4 cut(s)	891, 1420, 1450, 2366
BspCNI	CTCAG	4 cut(s)	234, 1328, 2286, 2428
BspEI	TCCGGA	1 cut(s)	1169
BspFNI	CGCG	1 cut(s)	2154
BspHI	TCATGA	2 cut(s)	742, 1896
BspLI	GGNNCC	8 cut(s)	230, 516, 829, 1063, 1321, 1411, 1987, 2367
BspMAI	CTGCAG	2 cut(s)	1138, 2131
BspPI	GGATC	2 cut(s)	30, 1180
BspQI	GCTCTTC	1 cut(s)	2404
BspT107I	GGYRCC	1 cut(s)	1409
BspTNI	GGTCTC	1 cut(s)	2284
BsrDI	GCAATG	1 cut(s)	1250
BsrFI	RCCGGY	1 cut(s)	983
BsrI	ACTGG	3 cut(s)	255, 465, 1870
BssAI	RCCGGY	1 cut(s)	983
BssECI	CCNNGG	6 cut(s)	297, 370, 717, 1902, 1936, 2028
BssT1I	CCWWGG	3 cut(s)	297, 1902, 1936
Bst2UI	CCWGG	9 cut(s)	371, 383, 519, 719, 1101, 1452, 1590, 1648, 2030
Bst4CI	ACNGT	6 cut(s)	98, 249, 1759, 2144, 2185, 2359
Bst6I	CTCTTC	2 cut(s)	451, 2404
BstBAI	YACGTR	2 cut(s)	575, 599
BstC8I	GCNNGC	6 cut(s)	1404, 1408, 1575, 1742, 1782, 1809
BstDEI	CTNAG	6 cut(s)	242, 1315, 1445, 2273, 2415, 2430
BstENI	CCTNNNNNAGG	1 cut(s)	1444
BstF5I	GGATG	5 cut(s)	331, 370, 718, 1375, 1799
BstFNI	CGCG	1 cut(s)	2154
BstHHI	GCGC	1 cut(s)	190
BstMAI	GTCTC	3 cut(s)	238, 772, 2284
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	8 cut(s)	185, 585, 722, 1610, 1640, 2033, 2225, 2313
BstNI	CCWGG	9 cut(s)	371, 383, 519, 719, 1101, 1452, 1590, 1648, 2030
BstNSI	RCATGY	2 cut(s)	1784, 1811
BstSFI	CTRYAG	4 cut(s)	1134, 1692, 2113, 2127
BstSNI	TACGTA	1 cut(s)	575
BstUI	CGCG	1 cut(s)	2154
BstV1I	GCAGC	9 cut(s)	622, 1589, 1630, 1687, 1865, 1921, 1961, 2130, 2141
BstV2I	GAAGAC	1 cut(s)	2057
BstX2I	RGATCY	1 cut(s)	963
BstYI	RGATCY	1 cut(s)	963
Bsu36I	CCTNAGG	1 cut(s)	2415
BsuRI	GGCC	4 cut(s)	891, 1420, 1450, 2366
BtgZI	GCGATG	1 cut(s)	1594
BtsCI	GGATG	5 cut(s)	331, 370, 718, 1375, 1799
BtsIMutI	CAGTG	3 cut(s)	262, 472, 1755
Cac8I	GCNNGC	6 cut(s)	1404, 1408, 1575, 1742, 1782, 1809
CciI	TCATGA	2 cut(s)	742, 1896
CfoI	GCGC	1 cut(s)	190
Cfr10I	RCCGGY	1 cut(s)	983
Cfr13I	GGNCC	4 cut(s)	1094, 1205, 1320, 2365
CsiI	ACCWGGT	2 cut(s)	517, 1099
Csp6I	GTAC	4 cut(s)	107, 572, 1104, 2150
CviAII	CATG	9 cut(s)	200, 743, 929, 1183, 1769, 1781, 1808, 1897, 1930
CviQI	GTAC	4 cut(s)	107, 572, 1104, 2150
DdeI	CTNAG	6 cut(s)	242, 1315, 1445, 2273, 2415, 2430
DraI	TTTAAA	2 cut(s)	973, 2332
EaeI	YGGCCR	1 cut(s)	889
Eam1104I	CTCTTC	2 cut(s)	451, 2404
EarI	CTCTTC	2 cut(s)	451, 2404
Eco105I	TACGTA	1 cut(s)	575
Eco130I	CCWWGG	3 cut(s)	297, 1902, 1936
Eco147I	AGGCCT	2 cut(s)	1420, 1450
Eco24I	GRGCYC	1 cut(s)	1990
Eco31I	GGTCTC	1 cut(s)	2284
Eco32I	GATATC	1 cut(s)	1492
Eco47I	GGWCC	3 cut(s)	1094, 1205, 1320
Eco57I	CTGAAG	1 cut(s)	1052
Eco72I	CACGTG	1 cut(s)	599
Eco81I	CCTNAGG	1 cut(s)	2415
Eco88I	CYCGRG	3 cut(s)	639, 1842, 1859
EcoNI	CCTNNNNNAGG	1 cut(s)	1444
EcoO109I	RGGNCCY	1 cut(s)	2365
EcoRII	CCWGG	9 cut(s)	369, 381, 517, 717, 1099, 1450, 1588, 1646, 2028
EcoRV	GATATC	1 cut(s)	1492
EcoT14I	CCWWGG	3 cut(s)	297, 1902, 1936
EcoT38I	GRGCYC	1 cut(s)	1990
ErhI	CCWWGG	3 cut(s)	297, 1902, 1936
FaeI	CATG	9 cut(s)	203, 746, 932, 1186, 1772, 1784, 1811, 1900, 1933
FalI	AAGNNNNNCTT	4 cut(s)	953, 985, 2253, 2285
FaqI	GGGAC	2 cut(s)	401, 1861
FatI	CATG	9 cut(s)	199, 742, 928, 1182, 1768, 1780, 1807, 1896, 1929
FauNDI	CATATG	1 cut(s)	763
FbaI	TGATCA	4 cut(s)	328, 469, 529, 1543
FokI	GGATG	5 cut(s)	338, 377, 725, 1382, 1806
FriOI	GRGCYC	1 cut(s)	1990
FspBI	CTAG	5 cut(s)	224, 866, 2195, 2240, 2408
GlaI	GCGC	1 cut(s)	189
GsaI	CCCAGC	1 cut(s)	1392
GsuI	CTGGAG	4 cut(s)	31, 448, 1572, 1620
HaeIII	GGCC	4 cut(s)	891, 1420, 1450, 2366
HapII	CCGG	5 cut(s)	110, 892, 984, 1170, 1487
HhaI	GCGC	1 cut(s)	190
Hin1II	CATG	9 cut(s)	203, 746, 932, 1186, 1772, 1784, 1811, 1900, 1933
Hin6I	GCGC	1 cut(s)	188
HinP1I	GCGC	1 cut(s)	188
HindIII	AAGCTT	3 cut(s)	387, 723, 1742
HinfI	GANTC	7 cut(s)	313, 341, 737, 1142, 1585, 1685, 1772
HpaII	CCGG	5 cut(s)	110, 892, 984, 1170, 1487
HphI	GGTGA	6 cut(s)	573, 1972, 2020, 2156, 2249, 2394
Hpy166II	GTNNAC	3 cut(s)	863, 1097, 1505
Hpy8I	GTNNAC	3 cut(s)	863, 1097, 1505
Hpy99I	CGWCG	2 cut(s)	82, 1984
HpyAV	CCTTC	5 cut(s)	608, 830, 1218, 1622, 2279
HpyCH4III	ACNGT	6 cut(s)	98, 249, 1759, 2144, 2185, 2359
HpyCH4IV	ACGT	3 cut(s)	574, 598, 2021
HpyF10VI	GCNNNNNNNGC	8 cut(s)	185, 585, 722, 1610, 1640, 2033, 2225, 2313
HpyF3I	CTNAG	6 cut(s)	242, 1315, 1445, 2273, 2415, 2430
HpySE526I	ACGT	3 cut(s)	574, 598, 2021
Hsp92II	CATG	9 cut(s)	203, 746, 932, 1186, 1772, 1784, 1811, 1900, 1933
HspAI	GCGC	1 cut(s)	188
Kpn2I	TCCGGA	1 cut(s)	1169
Ksp22I	TGATCA	4 cut(s)	328, 469, 529, 1543
LguI	GCTCTTC	1 cut(s)	2404
LmnI	GCTCC	9 cut(s)	29, 50, 185, 467, 1061, 1255, 1601, 1906, 1985
Lsp1109I	GCAGC	9 cut(s)	622, 1589, 1630, 1687, 1865, 1921, 1961, 2130, 2141
LweI	GCATC	3 cut(s)	703, 1270, 1662
MabI	ACCWGGT	2 cut(s)	517, 1099
MaeI	CTAG	5 cut(s)	224, 866, 2195, 2240, 2408
MaeII	ACGT	3 cut(s)	574, 598, 2021
MaeIII	GTNAC	6 cut(s)	215, 757, 931, 1828, 2008, 2051
MboII	GAAGA	9 cut(s)	438, 1045, 1735, 2057, 2210, 2246, 2357, 2391, 2402
MfeI	CAATTG	2 cut(s)	1284, 1352
MflI	RGATCY	1 cut(s)	963
MhlI	GDGCHC	3 cut(s)	1084, 1252, 1990
MlyI	GAGTC	4 cut(s)	350, 1579, 1694, 1781
MmeI	TCCRAC	2 cut(s)	687, 1183
MroI	TCCGGA	1 cut(s)	1169
MroXI	GAANNNNTTC	2 cut(s)	1975, 2253
MseI	TTAA	8 cut(s)	498, 624, 672, 815, 972, 1637, 1823, 2331
MslI	CAYNNNNRTG	3 cut(s)	747, 1187, 2262
MspA1I	CMGCKG	1 cut(s)	1952
MspI	CCGG	5 cut(s)	110, 892, 984, 1170, 1487
MunI	CAATTG	2 cut(s)	1284, 1352
Mva1269I	GAATGC	1 cut(s)	858
MvaI	CCWGG	9 cut(s)	371, 383, 519, 719, 1101, 1452, 1590, 1648, 2030
MvnI	CGCG	1 cut(s)	2154
MwoI	GCNNNNNNNGC	8 cut(s)	185, 585, 722, 1610, 1640, 2033, 2225, 2313
NciI	CCSGG	1 cut(s)	111
NdeI	CATATG	1 cut(s)	763
NlaIII	CATG	9 cut(s)	203, 746, 932, 1186, 1772, 1784, 1811, 1900, 1933
NlaIV	GGNNCC	8 cut(s)	230, 516, 829, 1063, 1321, 1411, 1987, 2367
NmuCI	GTSAC	3 cut(s)	1828, 2008, 2051
NspI	RCATGY	2 cut(s)	1784, 1811
PaeI	GCATGC	2 cut(s)	1784, 1811
PaeR7I	CTCGAG	1 cut(s)	1842
PagI	TCATGA	2 cut(s)	742, 1896
PceI	AGGCCT	2 cut(s)	1420, 1450
PciSI	GCTCTTC	1 cut(s)	2404
PcsI	WCGNNNNNNNCGW	1 cut(s)	1462
PctI	GAATGC	1 cut(s)	858
PdmI	GAANNNNTTC	2 cut(s)	1975, 2253
PfeI	GAWTC	3 cut(s)	313, 737, 1142
PfoI	TCCNGGA	2 cut(s)	381, 1588
Ple19I	CGATCG	1 cut(s)	77
PleI	GAGTC	4 cut(s)	349, 1579, 1693, 1780
PmaCI	CACGTG	1 cut(s)	599
PmlI	CACGTG	1 cut(s)	599
PpsI	GAGTC	4 cut(s)	349, 1579, 1693, 1780
Ppu21I	YACGTR	2 cut(s)	575, 599
PshBI	ATTAAT	2 cut(s)	624, 815
Psp6I	CCWGG	9 cut(s)	369, 381, 517, 717, 1099, 1450, 1588, 1646, 2028
PspCI	CACGTG	1 cut(s)	599
PspFI	CCCAGC	1 cut(s)	1388
PspGI	CCWGG	9 cut(s)	369, 381, 517, 717, 1099, 1450, 1588, 1646, 2028
PspN4I	GGNNCC	8 cut(s)	230, 516, 829, 1063, 1321, 1411, 1987, 2367
PspPI	GGNCC	4 cut(s)	1094, 1205, 1320, 2365
PspXI	VCTCGAGB	1 cut(s)	1842
PstI	CTGCAG	2 cut(s)	1138, 2131
PsuI	RGATCY	1 cut(s)	963
PvuI	CGATCG	1 cut(s)	77
PvuII	CAGCTG	1 cut(s)	1952
RsaI	GTAC	4 cut(s)	108, 573, 1105, 2151
RsaNI	GTAC	4 cut(s)	107, 572, 1104, 2150
RseI	CAYNNNNRTG	3 cut(s)	747, 1187, 2262
SapI	GCTCTTC	1 cut(s)	2404
SaqAI	TTAA	8 cut(s)	498, 624, 672, 815, 972, 1637, 1823, 2331
Sau96I	GGNCC	4 cut(s)	1094, 1205, 1320, 2365
SchI	GAGTC	4 cut(s)	350, 1579, 1694, 1781
SduI	GDGCHC	3 cut(s)	1084, 1252, 1990
SexAI	ACCWGGT	2 cut(s)	517, 1099
SfaNI	GCATC	3 cut(s)	703, 1270, 1662
SfcI	CTRYAG	4 cut(s)	1134, 1692, 2113, 2127
Sfr274I	CTCGAG	1 cut(s)	1842
SinI	GGWCC	3 cut(s)	1094, 1205, 1320
SlaI	CTCGAG	1 cut(s)	1842
SmiMI	CAYNNNNRTG	3 cut(s)	747, 1187, 2262
SmlI	CTYRAG	1 cut(s)	1842
SmoI	CTYRAG	1 cut(s)	1842
SnaBI	TACGTA	1 cut(s)	575
SphI	GCATGC	2 cut(s)	1784, 1811
SseBI	AGGCCT	2 cut(s)	1420, 1450
SsiI	CCGC	3 cut(s)	83, 86, 1753
SspI	AATATT	2 cut(s)	676, 909
SspMI	CTAG	5 cut(s)	224, 866, 2195, 2240, 2408
StuI	AGGCCT	2 cut(s)	1420, 1450
StyI	CCWWGG	3 cut(s)	297, 1902, 1936
TaaI	ACNGT	6 cut(s)	98, 249, 1759, 2144, 2185, 2359
TaiI	ACGT	3 cut(s)	577, 601, 2024
TaqI	TCGA	8 cut(s)	34, 138, 696, 1291, 1456, 1843, 1979, 2303
TauI	GCSGC	3 cut(s)	86, 89, 1755
TfiI	GAWTC	3 cut(s)	313, 737, 1142
Tru1I	TTAA	8 cut(s)	498, 624, 672, 815, 972, 1637, 1823, 2331
Tru9I	TTAA	8 cut(s)	498, 624, 672, 815, 972, 1637, 1823, 2331
TscAI	CASTG	3 cut(s)	262, 472, 1762
TseFI	GTSAC	3 cut(s)	1828, 2008, 2051
TseI	GCWGC	9 cut(s)	635, 1577, 1643, 1675, 1853, 1909, 1949, 2118, 2129
Tsp45I	GTSAC	3 cut(s)	1828, 2008, 2051
TspDTI	ATGAA	6 cut(s)	382, 618, 1008, 1171, 1641, 1899
TspGWI	ACGGA	1 cut(s)	377
TspRI	CASTG	3 cut(s)	262, 472, 1762
VpaK11BI	GGWCC	3 cut(s)	1094, 1205, 1320
VspI	ATTAAT	2 cut(s)	624, 815
XagI	CCTNNNNNAGG	1 cut(s)	1444
XapI	RAATTY	7 cut(s)	52, 236, 277, 409, 1016, 1068, 1974
XbaI	TCTAGA	1 cut(s)	2407
XceI	RCATGY	2 cut(s)	1784, 1811
XhoI	CTCGAG	1 cut(s)	1842
XmnI	GAANNNNTTC	2 cut(s)	1975, 2253
XspI	CTAG	5 cut(s)	224, 866, 2195, 2240, 2408

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.