FvH4_6g13480

ATP-dependent zinc metalloprotease FTSH 10, mitochondrial-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0002584
Physical Location & Seq
Forward (+)
8176375 .. 8181452
5078 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g13480.t4

Sequence Viewer

Length: 2439 bp
ATGATTTTCTCCACCGGCGGACGCCTCCTCTCTCGCTCGGCTCGCTCCGCGTTCCAGAAGAATCTAATTTTGGTTAATAATAATGGAAACGCTGCGTTTCGGCACCAACCGCCGACGCCGCTCGCCGGCAATGCTGGCATTACCGACGGGTTAGGGCTTCTGAGGAGTTATTTAACTTACCACGGAGCTGGGAAGCAGCTCGTTTCGAATACGTACTTGTCCAATTTGAAATCGGCTATTGCAAACCCTAGGATGCGTCGCCTCTTCTCCAGCGAAAGGCCTGGCAAGAAAAATTACGAAAATTACTATCCGAAAGATAAGAAGGGAATTCCGAAAGGCGGTCAGAAATCCGGGTCGAAAGATGGCGCTGGTGATCAGGGGAGTAAGCAGGACCATTTTTTGAAGCAGATTCAGATTCAGGATTTGATCGCTCCTTTATTGTTCGTGGGATTTGTTTTGATATCGTTACTGCCACAACAACAAAAGCAGATAAGTTTCCAAGAATTTAAAAACACGCTACTTGAACCTGGGTTGGTGGATCACATTGAAGTGGCAAATAAATCAGTTGCAAAAGTGTATGTGAGGAGCTCCCCACGCACTAAAGATGAAACTAGTGAAGATTCTGTTAAGGGGCCTGATGACAGTTCTTCTGGAGGAGTTTCGAGCAAGTACAAGTACTATTTTAACATCGGGAGTGTTGACTCTTTTGAGGAAAAATTGGAGGAAGCCCAAGAAGCCCTAGGGGTTGACAGTCATGATTTTGTTCCTGTAATTTATGTAGCGCAAGTTAATTGGTTTGGAGAGCTGATGAAGTATGCGCCAACAATCTTGCTTCTGGGAGTTTTTTGGTTCATGGGGCGAAAAATGCCTGGCATTGGTGGACCAGGTGGATCAGGTGGTAAAGGATTATTCAATATAGGAAAAGCACAGATCACGAAATTGGATAAGAATGCCAAAAACAAGGTTTTCTTTAAAGATGTAGCTGGCTGTGATGAGGCTAAGCAAGAAATTATGGAATTTGTGCACTTCCTCAAGAACCCTAAGAAATACGAGGAATTGGGAGCAAAAATTCCAAAAGGTGCCCTTCTTGTTGGCCCTCCTGGAACTGGAAAAACTCTTATTGCAAAGGCAACAGCAAGTGAATCCGGGGTGCCATTTCTCTCTATGGCTGGTTCGGATTTTATGGAAATGTTTGTTGGTGTTGGGCCATCAAGGGTTCGGAGTTTATTTCAAGAGGCAAGACAATGTGCACCCAGTATAATATTTATTGATGAGATTGATGCAATTGGCCGGGCAAGAGGGCGTGGAGGCTTTTCAGGTGGCAATGATGAGCGAGAAAGTACTCTCAATCAGTTGCTTGTAGAAATGGATGGTTTTGGAACAACTTCTGGAGTTGTTGTCCTGGCTGGGACCAATAGGCCTGATATTCTGGATAAAGCACTCTTGAGGCCTGGTCGGTTTGACCGTCAAATTACTATTGATAAACCAGACATTAAAGGTCGTAACCAGATATTTCAGATATACCTGAAAAAACTCAAACTGGATCATGAACCGTCCCATTACTCAGAGAGACTTGCTGCTCTGACTCCTGGATTCGCTGGAGCAGATATAGCTAATGTCTGCAATGAAGCTGCCTTGATTGCAGCAAGGAATGAGAGTGCAAAGATCACATTGAAACATTTTGAGGCAGCTATTGATCGTGTAATTGGTGGTCTTGAAAAGAAGAATAAGGTAATAAGCAAGCTGGAAAGACGGACTGTTGCTTACCATGAAGCTGGCCATGCTGTGGCTGGTTGGTTTTTGGAACATGCAGAACCTTTGCTCAAAGTAACTATTGTTCCACGCGGCACAGCAGCATTGGGGTTTGCTCAATATGTTCCCAATGAAAACCTGCTTATGACCAAAGAGCAGCTTTTTGATATGACATGCATGACCCTTGGTGGTCGAGCTTCTGAGCAGGTTTTGTTGGGGAAGATTTCAACTGGAGCGCAGAACGACTTGGAGAAAGTGACCAAAATGACATATGCCCAAGTTGCAATATATGGCTTCAGCGACAAAGTGGGCCTTCTTTCTTTTCCTCAAAATAATGAATTTGAGATGATGAAGCCTTACAGTAGCAAGACTGGTGCAATAATCGACAGTGAAGTTAGAGAATGGGTGGCTAAAGCATATACCCGCACTATTGAGCTGATAGAGGAGCACAAGGAGCATGTAGGACAGATTGCAGAGCTGTTGCTGGAAAAGGAGGTTCTACACCAAGAAGACTTGGTCCGAGTTTTGGGAGAGCGCCCATGGAAGTCGGAGGAGCCCACGAATTATGATAAATTTAAGCAAGGGTTCCAAGAAGAAGATAAGGAGGCTAAACAGACAACGACTGAGGGTAAGAATGTGAACGACGGTCAGTCACCACCTCCTCAACCTGATCCTGCGCCTGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AAA FtsH_ext Peptidase_M41

Protein Analysis

813

Amino Acids

89.21

Weight (kDa)

8.65

Isoelectric Point (pI)

36.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FtsH_ext PF06480 146 - 252 3.8e-10 FtsH Extracellular
AAA PF00004 362 - 494 3.9e-42 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 523 - 563 1.8e-12 AAA+ lid domain
Peptidase_M41 PF01434 578 - 656 8.9e-29 Peptidase family M41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1899, 1948
AccB1I GGYRCC 3 cut(s) 102, 1079, 1150
AccB7I CCANNNNNTGG 1 cut(s) 1786
AccBSI CCGCTC 1 cut(s) 121
AccII CGCG 2 cut(s) 50, 1845
AciI CCGC 7 cut(s) 18, 48, 110, 119, 339, 1845, 2176
AclWI GGATC 4 cut(s) 546, 898, 1551, 2417
AcoI YGGCCR 2 cut(s) 1288, 1777
AcsI RAATTY 6 cut(s) 327, 503, 1016, 1068, 2090, 2324
AcuI CTGAAG 1 cut(s) 2032
AcyI GRCGYC 2 cut(s) 22, 116
AfaI GTAC 4 cut(s) 215, 671, 677, 1342
AfiI CCNNNNNNNGG 7 cut(s) 125, 276, 338, 875, 1106, 1786, 2278
AgsI TTSAA 9 cut(s) 229, 403, 524, 548, 913, 1232, 1675, 1718, 1980
AhdI GACNNNNNGTC 1 cut(s) 2401
AhlI ACTAGT 1 cut(s) 611
AjnI CCWGG 8 cut(s) 280, 526, 868, 883, 1099, 1401, 1450, 1588
AjuI GAANNNNNNNTTGG 4 cut(s) 53, 85, 1179, 1211
Alw21I GWGCWC 4 cut(s) 590, 1026, 1252, 2202
Alw26I GTCTC 1 cut(s) 1564
Alw44I GTGCAC 2 cut(s) 1022, 1248
AlwI GGATC 4 cut(s) 546, 898, 1551, 2417
AoxI GGCC 9 cut(s) 278, 632, 1093, 1205, 1288, 1418, 1448, 1777, 2062
ApaLI GTGCAC 2 cut(s) 1022, 1248
ApeKI GCWGC 8 cut(s) 92, 196, 1577, 1631, 1643, 1688, 1853, 1909
ApoI RAATTY 6 cut(s) 327, 503, 1016, 1068, 2090, 2324
Asp700I GAANNNNTTC 1 cut(s) 1384
AspA2I CCTAGG 2 cut(s) 248, 739
AspLEI GCGC 6 cut(s) 368, 784, 820, 1990, 2289, 2431
AspS9I GGNCC 8 cut(s) 391, 632, 881, 1094, 1205, 1410, 2062, 2269
AsuC2I CCSGG 3 cut(s) 352, 1147, 1292
AsuHPI GGTGA 2 cut(s) 383, 2397
AsuII TTCGAA 1 cut(s) 206
AvaII GGWCC 4 cut(s) 391, 881, 1410, 2269
AvrII CCTAGG 2 cut(s) 248, 739
BaeGI GKGCMC 3 cut(s) 1026, 1084, 1252
BalI TGGCCA 1 cut(s) 1779
BanI GGYRCC 3 cut(s) 102, 1079, 1150
BanII GRGCYC 2 cut(s) 590, 2310
BbsI GAAGAC 1 cut(s) 2268
Bbv12I GWGCWC 4 cut(s) 590, 1026, 1252, 2202
BbvI GCAGC 8 cut(s) 79, 208, 1564, 1618, 1655, 1700, 1865, 1921
BccI CCATC 3 cut(s) 356, 1216, 1364
BciT130I CCWGG 8 cut(s) 282, 528, 870, 885, 1101, 1403, 1452, 1590
BclI TGATCA 1 cut(s) 373
BcnI CCSGG 3 cut(s) 352, 1147, 1292
BcoDI GTCTC 1 cut(s) 1564
BcuI ACTAGT 1 cut(s) 611
BfaI CTAG 3 cut(s) 249, 612, 740
BfoI RGCGCY 2 cut(s) 369, 2290
BfuAI ACCTGC 2 cut(s) 1899, 1948
BlnI CCTAGG 2 cut(s) 248, 739
BlpI GCTNAGC 1 cut(s) 999
BmcAI AGTACT 2 cut(s) 677, 1342
Bme18I GGWCC 4 cut(s) 391, 881, 1410, 2269
BmeRI GACNNNNNGTC 1 cut(s) 2401
BmgT120I GGNCC 8 cut(s) 391, 632, 881, 1094, 1205, 1410, 2062, 2269
BmiI GGNNCC 7 cut(s) 104, 633, 1081, 1152, 1411, 2307, 2339
BmrI ACTGGG 1 cut(s) 1248
BmsI GCATC 2 cut(s) 243, 1270
BmuI ACTGGG 1 cut(s) 1248
BpiI GAAGAC 1 cut(s) 2268
BpmI CTGGAG 5 cut(s) 253, 672, 1410, 1620, 2004
Bpu1102I GCTNAGC 1 cut(s) 999
Bpu14I TTCGAA 1 cut(s) 206
BpuEI CTTGAG 2 cut(s) 1016, 1465
BpuMI CCSGG 3 cut(s) 352, 1147, 1292
BsaAI YACGTR 1 cut(s) 213
BsaHI GRCGYC 2 cut(s) 22, 116
BsaJI CCNNGG 7 cut(s) 181, 248, 527, 739, 1146, 1936, 2291
BsaXI ACNNNNNCTCC 2 cut(s) 1383, 1413
Bsc4I CCNNNNNNNGG 7 cut(s) 125, 276, 338, 875, 1106, 1786, 2278
Bse118I RCCGGY 2 cut(s) 14, 125
Bse1I ACTGG 5 cut(s) 1111, 1254, 1545, 1987, 2128
Bse3DI GCAATG 3 cut(s) 136, 1330, 1630
BseBI CCWGG 8 cut(s) 282, 528, 870, 885, 1101, 1403, 1452, 1590
BseDI CCNNGG 7 cut(s) 181, 248, 527, 739, 1146, 1936, 2291
BseGI GGATG 2 cut(s) 258, 1375
BseLI CCNNNNNNNGG 7 cut(s) 125, 276, 338, 875, 1106, 1786, 2278
BseMI GCAATG 3 cut(s) 136, 1330, 1630
BseMII CTCAG 4 cut(s) 152, 1578, 1944, 2367
BseNI ACTGG 5 cut(s) 1111, 1254, 1545, 1987, 2128
BseRI GAGGAG 7 cut(s) 17, 178, 598, 669, 2210, 2318, 2403
BseSI GKGCMC 3 cut(s) 1026, 1084, 1252
BseXI GCAGC 8 cut(s) 79, 208, 1564, 1618, 1655, 1700, 1865, 1921
BseYI CCCAGC 2 cut(s) 188, 1406
Bsh1236I CGCG 2 cut(s) 50, 1845
BshFI GGCC 9 cut(s) 280, 634, 1095, 1207, 1290, 1420, 1450, 1779, 2064
BshNI GGYRCC 3 cut(s) 102, 1079, 1150
BsiHKAI GWGCWC 4 cut(s) 590, 1026, 1252, 2202
BsiSI CCGG 5 cut(s) 15, 126, 351, 1146, 1291
BslFI GGGAC 2 cut(s) 1423, 1540
BslI CCNNNNNNNGG 7 cut(s) 125, 276, 338, 875, 1106, 1786, 2278
BsmAI GTCTC 1 cut(s) 1564
BsmFI GGGAC 2 cut(s) 1423, 1540
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 9 cut(s) 280, 634, 1095, 1207, 1290, 1420, 1450, 1779, 2064
Bsp119I TTCGAA 1 cut(s) 206
Bsp1286I GDGCHC 6 cut(s) 590, 1026, 1084, 1252, 2202, 2310
Bsp143I GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
Bsp1720I GCTNAGC 1 cut(s) 999
Bsp19I CCATGG 1 cut(s) 2291
BspACI CCGC 7 cut(s) 18, 48, 110, 119, 339, 1845, 2176
BspANI GGCC 9 cut(s) 280, 634, 1095, 1207, 1290, 1420, 1450, 1779, 2064
BspCNI CTCAG 4 cut(s) 153, 1577, 1945, 2368
BspFNI CGCG 2 cut(s) 50, 1845
BspHI TCATGA 2 cut(s) 754, 1546
BspLI GGNNCC 7 cut(s) 104, 633, 1081, 1152, 1411, 2307, 2339
BspMI ACCTGC 2 cut(s) 1899, 1948
BspPI GGATC 4 cut(s) 546, 898, 1551, 2417
BspT104I TTCGAA 1 cut(s) 206
BspT107I GGYRCC 3 cut(s) 102, 1079, 1150
BsrBI CCGCTC 1 cut(s) 121
BsrDI GCAATG 3 cut(s) 136, 1330, 1630
BsrFI RCCGGY 2 cut(s) 14, 125
BsrI ACTGG 5 cut(s) 1111, 1254, 1545, 1987, 2128
BssAI RCCGGY 2 cut(s) 14, 125
BssECI CCNNGG 7 cut(s) 181, 248, 527, 739, 1146, 1936, 2291
BssMI GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
BssNI GRCGYC 2 cut(s) 22, 116
BssT1I CCWWGG 4 cut(s) 248, 739, 1936, 2291
Bst2UI CCWGG 8 cut(s) 282, 528, 870, 885, 1101, 1403, 1452, 1590
Bst4CI ACNGT 8 cut(s) 644, 752, 1466, 1554, 1759, 2114, 2141, 2399
Bst6I CTCTTC 1 cut(s) 269
BstACI GRCGYC 2 cut(s) 22, 116
BstBAI YACGTR 1 cut(s) 213
BstBI TTCGAA 1 cut(s) 206
BstC8I GCNNGC 8 cut(s) 43, 123, 127, 136, 985, 1742, 1777, 2433
BstDEI CTNAG 6 cut(s) 161, 999, 1041, 1564, 1953, 2376
BstDSI CCRYGG 2 cut(s) 181, 2291
BstF5I GGATG 2 cut(s) 258, 1375
BstFNI CGCG 2 cut(s) 50, 1845
BstH2I RGCGCY 2 cut(s) 369, 2290
BstHHI GCGC 6 cut(s) 368, 784, 820, 1990, 2289, 2431
BstKTI GATC 9 cut(s) 376, 429, 541, 893, 933, 1546, 1668, 1699, 2425
BstMAI GTCTC 1 cut(s) 1564
BstMBI GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
BstNI CCWGG 8 cut(s) 282, 528, 870, 885, 1101, 1403, 1452, 1590
BstNSI RCATGY 3 cut(s) 1811, 1929, 2213
BstSLI GKGCMC 3 cut(s) 1026, 1084, 1252
BstSNI TACGTA 1 cut(s) 213
BstUI CGCG 2 cut(s) 50, 1845
BstV1I GCAGC 8 cut(s) 79, 208, 1564, 1618, 1655, 1700, 1865, 1921
BstV2I GAAGAC 1 cut(s) 2268
BstXI CCANNNNNNTGG 2 cut(s) 188, 1775
BsuRI GGCC 9 cut(s) 280, 634, 1095, 1207, 1290, 1420, 1450, 1779, 2064
BtgI CCRYGG 2 cut(s) 181, 2291
BtsCI GGATG 2 cut(s) 258, 1375
BtsIMutI CAGTG 1 cut(s) 2146
BveI ACCTGC 2 cut(s) 1899, 1948
Cac8I GCNNGC 8 cut(s) 43, 123, 127, 136, 985, 1742, 1777, 2433
CciI TCATGA 2 cut(s) 754, 1546
CfoI GCGC 6 cut(s) 368, 784, 820, 1990, 2289, 2431
Cfr10I RCCGGY 2 cut(s) 14, 125
Cfr13I GGNCC 8 cut(s) 391, 632, 881, 1094, 1205, 1410, 2062, 2269
CseI GACGC 3 cut(s) 30, 124, 245
CsiI ACCWGGT 1 cut(s) 883
Csp6I GTAC 4 cut(s) 214, 670, 676, 1341
CviQI GTAC 4 cut(s) 214, 670, 676, 1341
DdeI CTNAG 6 cut(s) 161, 999, 1041, 1564, 1953, 2376
DpnI GATC 9 cut(s) 375, 428, 540, 892, 932, 1545, 1667, 1698, 2424
DpnII GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
DraI TTTAAA 2 cut(s) 508, 973
DriI GACNNNNNGTC 1 cut(s) 2401
EaeI YGGCCR 2 cut(s) 1288, 1777
Eam1104I CTCTTC 1 cut(s) 269
Eam1105I GACNNNNNGTC 1 cut(s) 2401
EarI CTCTTC 1 cut(s) 269
EciI GGCGGA 1 cut(s) 33
Ecl136II GAGCTC 1 cut(s) 588
Eco105I TACGTA 1 cut(s) 213
Eco130I CCWWGG 4 cut(s) 248, 739, 1936, 2291
Eco147I AGGCCT 3 cut(s) 280, 1420, 1450
Eco24I GRGCYC 2 cut(s) 590, 2310
Eco32I GATATC 1 cut(s) 462
Eco47I GGWCC 4 cut(s) 391, 881, 1410, 2269
Eco53kI GAGCTC 1 cut(s) 588
Eco57I CTGAAG 1 cut(s) 2032
EcoICRI GAGCTC 1 cut(s) 588
EcoO109I RGGNCCY 1 cut(s) 632
EcoRI GAATTC 1 cut(s) 327
EcoRII CCWGG 8 cut(s) 280, 526, 868, 883, 1099, 1401, 1450, 1588
EcoRV GATATC 1 cut(s) 462
EcoT14I CCWWGG 4 cut(s) 248, 739, 1936, 2291
EcoT22I ATGCAT 1 cut(s) 1931
EcoT38I GRGCYC 2 cut(s) 590, 2310
ErhI CCWWGG 4 cut(s) 248, 739, 1936, 2291
FalI AAGNNNNNCTT 8 cut(s) 953, 985, 1068, 1100, 1896, 1928, 2049, 2081
FaqI GGGAC 2 cut(s) 1423, 1540
FauI CCCGC 1 cut(s) 2183
FauNDI CATATG 1 cut(s) 2023
FbaI TGATCA 1 cut(s) 373
FokI GGATG 2 cut(s) 265, 1382
FriOI GRGCYC 2 cut(s) 590, 2310
FspBI CTAG 3 cut(s) 249, 612, 740
GlaI GCGC 6 cut(s) 367, 783, 819, 1989, 2288, 2430
GsaI CCCAGC 2 cut(s) 192, 1410
GsuI CTGGAG 5 cut(s) 253, 672, 1410, 1620, 2004
HaeII RGCGCY 2 cut(s) 369, 2290
HaeIII GGCC 9 cut(s) 280, 634, 1095, 1207, 1290, 1420, 1450, 1779, 2064
HapII CCGG 5 cut(s) 15, 126, 351, 1146, 1291
HgaI GACGC 3 cut(s) 30, 124, 245
HhaI GCGC 6 cut(s) 368, 784, 820, 1990, 2289, 2431
Hin1I GRCGYC 2 cut(s) 22, 116
Hin6I GCGC 6 cut(s) 366, 782, 818, 1988, 2287, 2429
HinP1I GCGC 6 cut(s) 366, 782, 818, 1988, 2287, 2429
HincII GTYRAC 2 cut(s) 700, 748
HindII GTYRAC 2 cut(s) 700, 748
HinfI GANTC 8 cut(s) 61, 409, 415, 620, 701, 1142, 1585, 1593
HpaII CCGG 5 cut(s) 15, 126, 351, 1146, 1291
HphI GGTGA 2 cut(s) 383, 2397
Hpy166II GTNNAC 6 cut(s) 700, 748, 881, 1024, 1250, 2392
Hpy8I GTNNAC 6 cut(s) 700, 748, 881, 1024, 1250, 2392
Hpy99I CGWCG 4 cut(s) 118, 149, 261, 2399
HpyAV CCTTC 3 cut(s) 316, 1094, 2075
HpyCH4III ACNGT 8 cut(s) 644, 752, 1466, 1554, 1759, 2114, 2141, 2399
HpyCH4IV ACGT 1 cut(s) 212
HpyF3I CTNAG 6 cut(s) 161, 999, 1041, 1564, 1953, 2376
HpySE526I ACGT 1 cut(s) 212
Hsp92I GRCGYC 2 cut(s) 22, 116
HspAI GCGC 6 cut(s) 366, 782, 818, 1988, 2287, 2429
KroI GCCGGC 1 cut(s) 125
KroNI GCCGGC 1 cut(s) 127
Ksp22I TGATCA 1 cut(s) 373
Kzo9I GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
Lsp1109I GCAGC 8 cut(s) 79, 208, 1564, 1618, 1655, 1700, 1865, 1921
LweI GCATC 2 cut(s) 243, 1270
MabI ACCWGGT 1 cut(s) 883
MaeI CTAG 3 cut(s) 249, 612, 740
MaeII ACGT 1 cut(s) 212
MaeIII GTNAC 5 cut(s) 465, 1502, 1828, 2008, 2403
MalI GATC 9 cut(s) 375, 428, 540, 892, 932, 1545, 1667, 1698, 2424
MbiI CCGCTC 1 cut(s) 121
MboI GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
MboII GAAGA 9 cut(s) 70, 256, 629, 639, 1735, 1984, 2273, 2357, 2360
MfeI CAATTG 1 cut(s) 1284
MhlI GDGCHC 6 cut(s) 590, 1026, 1084, 1252, 2202, 2310
MlsI TGGCCA 1 cut(s) 1779
MluNI TGGCCA 1 cut(s) 1779
MlyI GAGTC 2 cut(s) 695, 1579
MmeI TCCRAC 1 cut(s) 2280
Mox20I TGGCCA 1 cut(s) 1779
Mph1103I ATGCAT 1 cut(s) 1931
MroNI GCCGGC 1 cut(s) 125
MroXI GAANNNNTTC 1 cut(s) 1384
MscI TGGCCA 1 cut(s) 1779
MseI TTAA 9 cut(s) 75, 173, 507, 627, 684, 789, 972, 1494, 2328
MslI CAYNNNNRTG 1 cut(s) 548
Msp20I TGGCCA 1 cut(s) 1779
MspI CCGG 5 cut(s) 15, 126, 351, 1146, 1291
MunI CAATTG 1 cut(s) 1284
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 8 cut(s) 282, 528, 870, 885, 1101, 1403, 1452, 1590
MvnI CGCG 2 cut(s) 50, 1845
NaeI GCCGGC 1 cut(s) 127
NciI CCSGG 3 cut(s) 352, 1147, 1292
NcoI CCATGG 1 cut(s) 2291
NdeI CATATG 1 cut(s) 2023
NdeII GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
NgoMIV GCCGGC 1 cut(s) 125
NlaIV GGNNCC 7 cut(s) 104, 633, 1081, 1152, 1411, 2307, 2339
NmeAIII GCCGAG 1 cut(s) 17
NmuCI GTSAC 2 cut(s) 2008, 2403
NsiI ATGCAT 1 cut(s) 1931
NspI RCATGY 3 cut(s) 1811, 1929, 2213
NspV TTCGAA 1 cut(s) 206
PagI TCATGA 2 cut(s) 754, 1546
PceI AGGCCT 3 cut(s) 280, 1420, 1450
PcsI WCGNNNNNNNCGW 1 cut(s) 1462
PctI GAATGC 1 cut(s) 955
PdiI GCCGGC 1 cut(s) 127
PdmI GAANNNNTTC 1 cut(s) 1384
PfeI GAWTC 6 cut(s) 61, 409, 415, 620, 1142, 1593
PflFI GACNNNGTC 1 cut(s) 2267
PflMI CCANNNNNTGG 1 cut(s) 1786
PfoI TCCNGGA 2 cut(s) 1099, 1588
PleI GAGTC 2 cut(s) 695, 1579
PpsI GAGTC 2 cut(s) 695, 1579
Ppu21I YACGTR 1 cut(s) 213
Psp124BI GAGCTC 1 cut(s) 590
Psp6I CCWGG 8 cut(s) 280, 526, 868, 883, 1099, 1401, 1450, 1588
PspFI CCCAGC 2 cut(s) 188, 1406
PspGI CCWGG 8 cut(s) 280, 526, 868, 883, 1099, 1401, 1450, 1588
PspN4I GGNNCC 7 cut(s) 104, 633, 1081, 1152, 1411, 2307, 2339
PspPI GGNCC 8 cut(s) 391, 632, 881, 1094, 1205, 1410, 2062, 2269
PsrI GAACNNNNNNTAC 2 cut(s) 1821, 1853
PsyI GACNNNGTC 1 cut(s) 2267
RsaI GTAC 4 cut(s) 215, 671, 677, 1342
RsaNI GTAC 4 cut(s) 214, 670, 676, 1341
RseI CAYNNNNRTG 1 cut(s) 548
SacI GAGCTC 1 cut(s) 590
SaqAI TTAA 9 cut(s) 75, 173, 507, 627, 684, 789, 972, 1494, 2328
Sau3AI GATC 9 cut(s) 373, 426, 538, 890, 930, 1543, 1665, 1696, 2422
Sau96I GGNCC 8 cut(s) 391, 632, 881, 1094, 1205, 1410, 2062, 2269
ScaI AGTACT 2 cut(s) 677, 1342
SchI GAGTC 2 cut(s) 695, 1579
SduI GDGCHC 6 cut(s) 590, 1026, 1084, 1252, 2202, 2310
SexAI ACCWGGT 1 cut(s) 883
SfaNI GCATC 2 cut(s) 243, 1270
SfuI TTCGAA 1 cut(s) 206
SgrAI CRCCGGYG 1 cut(s) 14
SinI GGWCC 4 cut(s) 391, 881, 1410, 2269
SmiMI CAYNNNNRTG 1 cut(s) 548
SmlI CTYRAG 2 cut(s) 1031, 1444
SmoI CTYRAG 2 cut(s) 1031, 1444
SnaBI TACGTA 1 cut(s) 213
SpeI ACTAGT 1 cut(s) 611
SseBI AGGCCT 3 cut(s) 280, 1420, 1450
SsiI CCGC 7 cut(s) 18, 48, 110, 119, 339, 1845, 2176
SspI AATATT 1 cut(s) 1263
SspMI CTAG 3 cut(s) 249, 612, 740
SstI GAGCTC 1 cut(s) 590
StuI AGGCCT 3 cut(s) 280, 1420, 1450
StyI CCWWGG 4 cut(s) 248, 739, 1936, 2291
TaaI ACNGT 8 cut(s) 644, 752, 1466, 1554, 1759, 2114, 2141, 2399
TaiI ACGT 1 cut(s) 215
TaqI TCGA 5 cut(s) 206, 356, 662, 1945, 2136
TatI WGTACW 3 cut(s) 669, 675, 1340
TauI GCSGC 2 cut(s) 121, 1848
TfiI GAWTC 6 cut(s) 61, 409, 415, 620, 1142, 1593
Tru1I TTAA 9 cut(s) 75, 173, 507, 627, 684, 789, 972, 1494, 2328
Tru9I TTAA 9 cut(s) 75, 173, 507, 627, 684, 789, 972, 1494, 2328
TscAI CASTG 1 cut(s) 2146
TseFI GTSAC 2 cut(s) 2008, 2403
TseI GCWGC 8 cut(s) 92, 196, 1577, 1631, 1643, 1688, 1853, 1909
Tsp45I GTSAC 2 cut(s) 2008, 2403
TspDTI ATGAA 9 cut(s) 621, 824, 841, 1563, 1641, 1785, 1899, 2103, 2117
TspGWI ACGGA 2 cut(s) 198, 1768
TspRI CASTG 1 cut(s) 2146
Tth111I GACNNNGTC 1 cut(s) 2267
Van91I CCANNNNNTGG 1 cut(s) 1786
VneI GTGCAC 2 cut(s) 1022, 1248
VpaK11BI GGWCC 4 cut(s) 391, 881, 1410, 2269
XapI RAATTY 6 cut(s) 327, 503, 1016, 1068, 2090, 2324
XceI RCATGY 3 cut(s) 1811, 1929, 2213
XcmI CCANNNNNNNNNTGG 1 cut(s) 1787
XmaJI CCTAGG 2 cut(s) 248, 739
XmnI GAANNNNTTC 1 cut(s) 1384
XspI CTAG 3 cut(s) 249, 612, 740
ZrmI AGTACT 2 cut(s) 677, 1342
Zsp2I ATGCAT 1 cut(s) 1931
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.