Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0002584

Physical Location & Seq

Genomic Coordinates Forward (+)

5559216 .. 5563953

Gene Structure 4738 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g06980.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGATTTTTTCTCGGATTGGTCGCTCCGTTTCTCGATCTTCTCGCGCCAGGAATTTGTTGCATGGAAGTGGGCGATCGGCGGGTCTGATTGGGAATGGAGGCATTTCTGGAGTTCCGCGTTTTGGTTCGTATCTGGGTCTGGTCGATGGGGAATTAGGGTTTTTGAGGTCGTATTTTGCTGCGTCAATAGCGGCCCACAAGGCCTGCGTTTCGGATTTCAGTGGCATTCTTGCAAACCCTAAACTTAGCCGACACTTTTCGAGTGAAACCCCAAAGAAAAAGAATTATGAGAACTTCTATCCCAAGGAAAAGAAGGAAATTCCGAAAGGAGATGAGCAGAAATCGGAGTCGAAAGATGAATCAAAGACAGATGATCAGGGGAGTTTTCAGGAAACTTTCTTGAGGCAGTTTCAAAATTTAATTACCCCGCTATTGGTCATTGGGCTATTTCTTTCCTCCTTCTCCTTTGGTTCTCCTGATCAACAACAGATAAGTTTCCAAGAGTTTAAAAACAAACTTCTGGAACCAGGCTTAGTGGATCATATAGTTGTCTCTAATAAATCAGTTGCAAAAGTGTATGTGCGTAGCTCGCCACGAGGTCAGACAAGTGAGGAAGTTGTCCAAGGACCTGGTACCCCTGCTCGTGCAAATGGGGGCCAGTACAAATACTATTTCAATATTGGAAGTGTTGAATCTTTTGAGGAGAAGTTGGAGGATGCCCAAGAAGCATTGGGAATAGACAGTCATGATTTTGTTCCTGTTACATATGTCTCTGAGATGGTTTGGTACCAAGAATTGATGAGATTTGCACCAACACTACTGCTTTTGGGATCCCTCTTGTTTATGGGGCGGAGAATGCAGGGTGGACTAGGTATTGGTGGTTCTGGCGGACGAAGTGGCCGTGGAATCTTCAATATAGGAAAAGCCCAAATCGATTTTAAAGATGTTGCTGGTTGCGATGAAGCAAAGCAGGAAATCATGGAATTTGTGCACTTTCTCAAGAATCCTAAGAAATATGAGGATTTGGGAGCCAAAATTCCCAAAGGAGCTCTATTGGTAGGCCCTCCAGGCACTGGAAAGACCCTTCTAGCAAAAGCAACTGCAGGGGAATCTGGTGTTCCGTTTCTATCTATGGCTGGATCAGACTTCATGGAGATGTTCGTTGGTGTTGGACCGTCAAGAGTCAGAAACTTGTTTCAGGAAGCAAGGCAATGTGCTCCTAGTATAATATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGGGGGCGTGGGGGCTTGTCAGGTTCCAATGATGAGCGCGAGAGTACTCTAAATCAGTTGTTGGTAGAAATGGATGGCTTTGGAACAACTGCTGGAGTAGTTGTTCTTGCTGGCACCAATAGGCCTGATATTTTGGACAAAGCCTTATTAAGGCCTGGTCGATTTGATCGCCAAATCTCTATTGATAAACCCGATATTAAAGGTCGTGACCAAATATTTCAGATATACTTGAAAAAGATCAAACTTGATCATGAACCATCATATTATTCTCAAAGGCTTGCAGCCCTAACTCCAGGGTTTGCTGGGGCAGACATTGCAAATGTTTGCAATGAAGGTGCTCTAATTGCTGCAAGAAATGAGAGTGCACTGGTCACAATGCAGCATTTTGAGGCGGCTATAGACAGAATTATTGGTGGTTTGGAGAAGAAGAACAGGGTTATAAGCAAGCTCGAGCGCCGTACTGTTGCCTACCATGAGGCAGGGCATGCTGTTACCGGCTGGTTCTTAGAACATGCAGAACCGTTGTTGAAAGTGACCATTGTTCCTCGAGGTACTGCAGCACTTGGGTTTGCGCAGTATGTTCCAAATGAAAACCTCCTCATGACCAAGGAGCAGCTTTTTGATATGACCTGCATGACCCTCGGTGGTAGAGCAGCTGAACAGGTTATGTTGGGGAAAATCTCGACGGGGGCCCAAAACGATCTGGAGAAAGTGACAAAGATGACCTACGCCCAAGTTGCAGTCTATGGTTTCAGTGACAAGGTGGGTCTTCTTTCTTTCCCTCAAAGGGAAGATTCATTTGAGATGTCAAAGCCCTACAGCAGCAAGACTGGAGCCCTTATTGATGGTGAAGTGCGCGAATGGGTGGGTAAGGCGTATGCACGCACAGTTGAACTCGTAGAGGAACATAAAGAGCAAATAGCTCAAATTGCAGAACTGTTGCTTGAAAAGGAAGTTCTTCACCAAGATGACCTGCTCAAGGTGTTGGGGGAAAGACCATATAAACCGGCTGAAGCGACCAACTATGATAGATTTAAGGACGGTTTCGAAGAGAAAAATGATGAAAAAACAGTGGAGACACCGCTGGTTGGGTCCGAGGATGACGGCTCATCACCCCTTGAGCCCCAGGTTCTGCCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0042221 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

802

Amino Acids

87.93

Weight (kDa)

6.03

Isoelectric Point (pI)

32.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07510 AT2G29080
fragaria_vesca	FvH4_3g36790 FvH4_3g36790 FvH4_3g36790 FvH4_6g13480 FvH4_6g13480 FvH4_6g13480
malus_domestica	MD03G1088300.v1.1 MD03G1088400.v1.1 MD04G1130900.v1.1 MD11G1097400.v1.1 MD12G1144000.v1.1
prunus_persica	Prupe.6G072600_v2.0.a1 Prupe.6G257400_v2.0.a1 Prupe.6G257400_v2.0.a1
pyrus_communis	pycom03g06980 pycom03g07000 pycom04g11920 pycom11g08210 pycom12g13860
rosa_chinensis	RchiOBHm_Chr3g0466351 RchiOBHm_Chr5g0065851
rosa_laevigata	RLG00000024582 RLG00000035821
rosa_multiflora	Rmu_sc0003480.1_g000012 Rmu_sc0042868.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015310 Rroxscaffold_6G00414550
rosa_rugosa	Rorug03G0081200 Rorug05G0374100 Rorug05G0374200 Rorug05G0374300
rosa_samantha	Rh3BG148900 Rh3DG149600 Rh5BG449200 Rh5CG471400 Rh5DG462800
rosa_wichuraiana	Rw3G012050 Rw5G040600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1703
AbsI	CCTCGAGG	1 cut(s)	1809
Acc16I	TGCGCA	1 cut(s)	1836
Acc36I	ACCTGC	2 cut(s)	1901, 2244
Acc65I	GGTACC	2 cut(s)	632, 786
AccB1I	GGYRCC	3 cut(s)	632, 786, 1376
AccB7I	CCANNNNNTGG	1 cut(s)	1073
AccII	CGCG	4 cut(s)	45, 118, 1302, 2121
AciI	CCGC	8 cut(s)	80, 116, 191, 428, 850, 888, 1655, 2345
AclWI	GGATC	4 cut(s)	546, 825, 838, 1147
AcoI	YGGCCR	1 cut(s)	898
AcsI	RAATTY	5 cut(s)	52, 318, 415, 983, 1035
AcuI	CTGAAG	1 cut(s)	2295
AfaI	GTAC	6 cut(s)	634, 662, 788, 1309, 1723, 1816
AfiI	CCNNNNNNNGG	7 cut(s)	122, 433, 1073, 1413, 2050, 2242, 2351
AgsI	TTSAA	8 cut(s)	413, 676, 692, 913, 1495, 1792, 2156, 2210
AjnI	CCWGG	7 cut(s)	47, 526, 628, 1066, 1417, 1555, 2388
AloI	GAACNNNNNNTCC	2 cut(s)	1350, 1382
AluBI	AGCT	6 cut(s)	588, 1049, 1711, 1879, 1919, 2186
AluI	AGCT	6 cut(s)	588, 1049, 1711, 1879, 1919, 2186
Alw21I	GWGCWC	5 cut(s)	993, 1051, 1219, 1603, 1630
Alw26I	GTCTC	3 cut(s)	556, 775, 2333
Alw44I	GTGCAC	2 cut(s)	989, 1626
AlwI	GGATC	4 cut(s)	546, 825, 838, 1147
AlwNI	CAGNNNCTG	2 cut(s)	1073, 2395
Ama87I	CYCGRG	2 cut(s)	1712, 1809
AoxI	GGCC	8 cut(s)	192, 201, 655, 898, 1060, 1385, 1415, 1953
ApaI	GGGCCC	1 cut(s)	1957
ApaLI	GTGCAC	2 cut(s)	989, 1626
ApeKI	GCWGC	8 cut(s)	179, 1544, 1610, 1642, 1820, 1876, 1916, 2085
ApoI	RAATTY	5 cut(s)	52, 318, 415, 983, 1035
Asp700I	GAANNNNTTC	1 cut(s)	2220
Asp718I	GGTACC	2 cut(s)	632, 786
AspLEI	GCGC	5 cut(s)	47, 1302, 1719, 1837, 2121
AspS9I	GGNCC	8 cut(s)	193, 626, 655, 1061, 1172, 1953, 1954, 2355
AsuHPI	GGTGA	3 cut(s)	2123, 2216, 2367
AsuII	TTCGAA	1 cut(s)	2310
AvaI	CYCGRG	2 cut(s)	1712, 1809
AvaII	GGWCC	3 cut(s)	626, 1172, 2355
BaeGI	GKGCMC	3 cut(s)	993, 1630, 1957
BamHI	GGATCC	1 cut(s)	830
BanI	GGYRCC	3 cut(s)	632, 786, 1376
BanII	GRGCYC	4 cut(s)	1051, 1957, 2101, 2388
BauI	CACGAG	2 cut(s)	594, 642
BbsI	GAAGAC	1 cut(s)	2024
Bbv12I	GWGCWC	5 cut(s)	993, 1051, 1219, 1603, 1630
BbvI	GCAGC	8 cut(s)	166, 1556, 1597, 1654, 1832, 1888, 1928, 2097
BccI	CCATC	5 cut(s)	140, 772, 1331, 1528, 2102
BceAI	ACGGC	3 cut(s)	885, 1704, 2383
BcgI	CGANNNNNNTGC	2 cut(s)	1885, 1919
BciT130I	CCWGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
BclI	TGATCA	3 cut(s)	373, 478, 1510
BcoDI	GTCTC	3 cut(s)	556, 775, 2333
BfaI	CTAG	3 cut(s)	869, 1088, 1221
BfmI	CTRYAG	4 cut(s)	1101, 1659, 1818, 2080
BfoI	RGCGCY	1 cut(s)	1720
BfuAI	ACCTGC	2 cut(s)	1901, 2244
BglI	GCCNNNNNGGC	2 cut(s)	200, 1068
BmcAI	AGTACT	1 cut(s)	1309
Bme1390I	CCNGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
Bme18I	GGWCC	3 cut(s)	626, 1172, 2355
BmeT110I	CYCGRG	2 cut(s)	1712, 1809
BmgT120I	GGNCC	8 cut(s)	193, 626, 655, 1061, 1172, 1953, 1954, 2355
BmrFI	CCNGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
BmsI	GCATC	2 cut(s)	706, 1237
BpiI	GAAGAC	1 cut(s)	2024
BpmI	CTGGAG	6 cut(s)	129, 1050, 1377, 1539, 1988, 2115
Bpu14I	TTCGAA	1 cut(s)	2310
BpuEI	CTTGAG	4 cut(s)	421, 983, 2225, 2402
Bsa29I	ATCGAT	1 cut(s)	933
BsaJI	CCNNGG	8 cut(s)	303, 622, 901, 1556, 1869, 1903, 2358, 2388
BsaXI	ACNNNNNCTCC	2 cut(s)	1350, 1380
Bsc4I	CCNNNNNNNGG	7 cut(s)	122, 433, 1073, 1413, 2050, 2242, 2351
Bse118I	RCCGGY	2 cut(s)	1757, 2269
Bse1I	ACTGG	4 cut(s)	658, 1078, 1635, 2098
Bse3DI	GCAATG	3 cut(s)	1217, 1575, 1597
BseBI	CCWGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
BseCI	ATCGAT	1 cut(s)	933
BseDI	CCNNGG	8 cut(s)	303, 622, 901, 1556, 1869, 1903, 2358, 2388
BseGI	GGATG	3 cut(s)	721, 1342, 2368
BseLI	CCNNNNNNNGG	7 cut(s)	122, 433, 1073, 1413, 2050, 2242, 2351
BseMI	GCAATG	3 cut(s)	1217, 1575, 1597
BseMII	CTCAG	1 cut(s)	765
BseNI	ACTGG	4 cut(s)	658, 1078, 1635, 2098
BseRI	GAGGAG	2 cut(s)	716, 1850
BseSI	GKGCMC	3 cut(s)	993, 1630, 1957
BseXI	GCAGC	8 cut(s)	166, 1556, 1597, 1654, 1832, 1888, 1928, 2097
BseYI	CCCAGC	1 cut(s)	1565
Bsh1236I	CGCG	4 cut(s)	45, 118, 1302, 2121
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	8 cut(s)	194, 203, 657, 900, 1062, 1387, 1417, 1955
BshNI	GGYRCC	3 cut(s)	632, 786, 1376
BshVI	ATCGAT	1 cut(s)	933
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	5 cut(s)	993, 1051, 1219, 1603, 1630
BsiHKCI	CYCGRG	2 cut(s)	1712, 1809
BsiSI	CCGG	2 cut(s)	1758, 2270
BslI	CCNNNNNNNGG	7 cut(s)	122, 433, 1073, 1413, 2050, 2242, 2351
BsmAI	GTCTC	3 cut(s)	556, 775, 2333
BsmI	GAATGC	2 cut(s)	225, 861
BsnI	GGCC	8 cut(s)	194, 203, 657, 900, 1062, 1387, 1417, 1955
BsoBI	CYCGRG	2 cut(s)	1712, 1809
Bsp119I	TTCGAA	1 cut(s)	2310
Bsp120I	GGGCCC	1 cut(s)	1953
Bsp1286I	GDGCHC	8 cut(s)	993, 1051, 1219, 1603, 1630, 1957, 2101, 2388
BspACI	CCGC	8 cut(s)	80, 116, 191, 428, 850, 888, 1655, 2345
BspANI	GGCC	8 cut(s)	194, 203, 657, 900, 1062, 1387, 1417, 1955
BspCNI	CTCAG	1 cut(s)	766
BspDI	ATCGAT	1 cut(s)	933
BspFNI	CGCG	4 cut(s)	45, 118, 1302, 2121
BspHI	TCATGA	3 cut(s)	745, 1513, 1863
BspMAI	CTGCAG	2 cut(s)	1105, 1822
BspMI	ACCTGC	2 cut(s)	1901, 2244
BspPI	GGATC	4 cut(s)	546, 825, 838, 1147
BspT104I	TTCGAA	1 cut(s)	2310
BspT107I	GGYRCC	3 cut(s)	632, 786, 1376
BsrDI	GCAATG	3 cut(s)	1217, 1575, 1597
BsrFI	RCCGGY	2 cut(s)	1757, 2269
BsrI	ACTGG	4 cut(s)	658, 1078, 1635, 2098
BssAI	RCCGGY	2 cut(s)	1757, 2269
BssECI	CCNNGG	8 cut(s)	303, 622, 901, 1556, 1869, 1903, 2358, 2388
BssSI	CACGAG	2 cut(s)	594, 642
BssT1I	CCWWGG	3 cut(s)	303, 622, 1869
Bst2BI	CACGAG	2 cut(s)	594, 642
Bst2UI	CCWGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
Bst4CI	ACNGT	8 cut(s)	743, 1176, 1726, 1785, 2152, 2202, 2306, 2335
Bst6I	CTCTTC	1 cut(s)	2307
BstAPI	GCANNNNNTGC	2 cut(s)	1577, 1748
BstBI	TTCGAA	1 cut(s)	2310
BstC8I	GCNNGC	7 cut(s)	205, 590, 1375, 1542, 1709, 1749, 2146
BstDEI	CTNAG	6 cut(s)	245, 532, 774, 1008, 1768, 2403
BstDSI	CCRYGG	1 cut(s)	901
BstENI	CCTNNNNNAGG	2 cut(s)	1411, 2240
BstF5I	GGATG	3 cut(s)	721, 1342, 2368
BstFNI	CGCG	4 cut(s)	45, 118, 1302, 2121
BstH2I	RGCGCY	1 cut(s)	1720
BstHHI	GCGC	5 cut(s)	47, 1302, 1719, 1837, 2121
BstMAI	GTCTC	3 cut(s)	556, 775, 2333
BstMCI	CGRYCG	1 cut(s)	77
BstNI	CCWGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
BstNSI	RCATGY	2 cut(s)	1751, 1778
BstSCI	CCNGG	7 cut(s)	47, 526, 628, 1066, 1417, 1555, 2388
BstSFI	CTRYAG	4 cut(s)	1101, 1659, 1818, 2080
BstSLI	GKGCMC	3 cut(s)	993, 1630, 1957
BstUI	CGCG	4 cut(s)	45, 118, 1302, 2121
BstV1I	GCAGC	8 cut(s)	166, 1556, 1597, 1654, 1832, 1888, 1928, 2097
BstV2I	GAAGAC	1 cut(s)	2024
BstX2I	RGATCY	1 cut(s)	830
BstXI	CCANNNNNNTGG	1 cut(s)	629
BstYI	RGATCY	1 cut(s)	830
Bsu15I	ATCGAT	1 cut(s)	933
BsuRI	GGCC	8 cut(s)	194, 203, 657, 900, 1062, 1387, 1417, 1955
BsuTUI	ATCGAT	1 cut(s)	933
BtgI	CCRYGG	1 cut(s)	901
BtgZI	GCGATG	1 cut(s)	972
BtsCI	GGATG	3 cut(s)	721, 1342, 2368
BtsIMutI	CAGTG	5 cut(s)	226, 1071, 1628, 2023, 2340
BveI	ACCTGC	2 cut(s)	1901, 2244
Cac8I	GCNNGC	7 cut(s)	205, 590, 1375, 1542, 1709, 1749, 2146
CaiI	CAGNNNCTG	2 cut(s)	1073, 2395
CciI	TCATGA	3 cut(s)	745, 1513, 1863
CfoI	GCGC	5 cut(s)	47, 1302, 1719, 1837, 2121
Cfr10I	RCCGGY	2 cut(s)	1757, 2269
Cfr13I	GGNCC	8 cut(s)	193, 626, 655, 1061, 1172, 1953, 1954, 2355
ClaI	ATCGAT	1 cut(s)	933
CseI	GACGC	1 cut(s)	171
CsiI	ACCWGGT	1 cut(s)	628
Csp6I	GTAC	6 cut(s)	633, 661, 787, 1308, 1722, 1815
CviQI	GTAC	6 cut(s)	633, 661, 787, 1308, 1722, 1815
DdeI	CTNAG	6 cut(s)	245, 532, 774, 1008, 1768, 2403
DraI	TTTAAA	2 cut(s)	508, 940
EaeI	YGGCCR	1 cut(s)	898
Eam1104I	CTCTTC	1 cut(s)	2307
EarI	CTCTTC	1 cut(s)	2307
EciI	GGCGGA	2 cut(s)	865, 903
Ecl136II	GAGCTC	1 cut(s)	1049
Eco130I	CCWWGG	3 cut(s)	303, 622, 1869
Eco147I	AGGCCT	3 cut(s)	203, 1387, 1417
Eco24I	GRGCYC	4 cut(s)	1051, 1957, 2101, 2388
Eco47I	GGWCC	3 cut(s)	626, 1172, 2355
Eco53kI	GAGCTC	1 cut(s)	1049
Eco57I	CTGAAG	1 cut(s)	2295
Eco88I	CYCGRG	2 cut(s)	1712, 1809
EcoICRI	GAGCTC	1 cut(s)	1049
EcoNI	CCTNNNNNAGG	2 cut(s)	1411, 2240
EcoO109I	RGGNCCY	3 cut(s)	626, 1061, 1953
EcoRII	CCWGG	7 cut(s)	47, 526, 628, 1066, 1417, 1555, 2388
EcoT14I	CCWWGG	3 cut(s)	303, 622, 1869
EcoT38I	GRGCYC	4 cut(s)	1051, 1957, 2101, 2388
ErhI	CCWWGG	3 cut(s)	303, 622, 1869
FauI	CCCGC	2 cut(s)	73, 435
FauNDI	CATATG	1 cut(s)	766
FbaI	TGATCA	3 cut(s)	373, 478, 1510
FokI	GGATG	3 cut(s)	728, 1349, 2375
FriOI	GRGCYC	4 cut(s)	1051, 1957, 2101, 2388
FspBI	CTAG	3 cut(s)	869, 1088, 1221
FspI	TGCGCA	1 cut(s)	1836
GlaI	GCGC	5 cut(s)	46, 1301, 1718, 1836, 2120
GsaI	CCCAGC	1 cut(s)	1569
GsuI	CTGGAG	6 cut(s)	129, 1050, 1377, 1539, 1988, 2115
HaeII	RGCGCY	1 cut(s)	1720
HaeIII	GGCC	8 cut(s)	194, 203, 657, 900, 1062, 1387, 1417, 1955
HapII	CCGG	2 cut(s)	1758, 2270
HgaI	GACGC	1 cut(s)	171
HhaI	GCGC	5 cut(s)	47, 1302, 1719, 1837, 2121
Hin6I	GCGC	5 cut(s)	45, 1300, 1717, 1835, 2119
HinP1I	GCGC	5 cut(s)	45, 1300, 1717, 1835, 2119
HinfI	GANTC	8 cut(s)	347, 359, 692, 906, 1003, 1109, 1182, 2057
HpaII	CCGG	2 cut(s)	1758, 2270
HphI	GGTGA	3 cut(s)	2123, 2216, 2367
Hpy166II	GTNNAC	3 cut(s)	866, 991, 1628
Hpy8I	GTNNAC	3 cut(s)	866, 991, 1628
Hpy99I	CGWCG	1 cut(s)	1951
HpyAV	CCTTC	4 cut(s)	307, 469, 1094, 1589
HpyCH4III	ACNGT	8 cut(s)	743, 1176, 1726, 1785, 2152, 2202, 2306, 2335
HpyF3I	CTNAG	6 cut(s)	245, 532, 774, 1008, 1768, 2403
HspAI	GCGC	5 cut(s)	45, 1300, 1717, 1835, 2119
KpnI	GGTACC	2 cut(s)	636, 790
Ksp22I	TGATCA	3 cut(s)	373, 478, 1510
LmnI	GCTCC	6 cut(s)	29, 1028, 1046, 1222, 1873, 2096
Lsp1109I	GCAGC	8 cut(s)	166, 1556, 1597, 1654, 1832, 1888, 1928, 2097
LweI	GCATC	2 cut(s)	706, 1237
MabI	ACCWGGT	1 cut(s)	628
MaeI	CTAG	3 cut(s)	869, 1088, 1221
MaeIII	GTNAC	7 cut(s)	760, 1469, 1633, 1753, 1795, 1975, 2018
MboII	GAAGA	8 cut(s)	30, 901, 1699, 1702, 2024, 2066, 2213, 2324
MfeI	CAATTG	1 cut(s)	1251
MflI	RGATCY	1 cut(s)	830
MhlI	GDGCHC	8 cut(s)	993, 1051, 1219, 1603, 1630, 1957, 2101, 2388
MlyI	GAGTC	2 cut(s)	356, 1191
MmeI	TCCRAC	2 cut(s)	690, 1150
MroXI	GAANNNNTTC	1 cut(s)	2220
MseI	TTAA	6 cut(s)	419, 507, 939, 1412, 1461, 2298
MslI	CAYNNNNRTG	3 cut(s)	66, 1154, 2229
MspA1I	CMGCKG	2 cut(s)	1919, 2347
MspI	CCGG	2 cut(s)	1758, 2270
MspR9I	CCNGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
MunI	CAATTG	1 cut(s)	1251
Mva1269I	GAATGC	2 cut(s)	225, 861
MvaI	CCWGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
MvnI	CGCG	4 cut(s)	45, 118, 1302, 2121
NdeI	CATATG	1 cut(s)	766
NmuCI	GTSAC	5 cut(s)	1469, 1633, 1795, 1975, 2018
NsbI	TGCGCA	1 cut(s)	1836
NspI	RCATGY	2 cut(s)	1751, 1778
NspV	TTCGAA	1 cut(s)	2310
PaeI	GCATGC	1 cut(s)	1751
PaeR7I	CTCGAG	2 cut(s)	1712, 1809
PagI	TCATGA	3 cut(s)	745, 1513, 1863
PceI	AGGCCT	3 cut(s)	203, 1387, 1417
PcsI	WCGNNNNNNNCGW	1 cut(s)	898
PctI	GAATGC	2 cut(s)	225, 861
PdmI	GAANNNNTTC	1 cut(s)	2220
PfeI	GAWTC	6 cut(s)	359, 692, 906, 1003, 1109, 2057
PflMI	CCANNNNNTGG	1 cut(s)	1073
Ple19I	CGATCG	1 cut(s)	77
PleI	GAGTC	2 cut(s)	355, 1190
PpsI	GAGTC	2 cut(s)	355, 1190
PpuMI	RGGWCCY	1 cut(s)	626
PsiI	TTATAA	1 cut(s)	1703
Psp124BI	GAGCTC	1 cut(s)	1051
Psp5II	RGGWCCY	1 cut(s)	626
Psp6I	CCWGG	7 cut(s)	47, 526, 628, 1066, 1417, 1555, 2388
PspFI	CCCAGC	1 cut(s)	1565
PspGI	CCWGG	7 cut(s)	47, 526, 628, 1066, 1417, 1555, 2388
PspOMI	GGGCCC	1 cut(s)	1953
PspPI	GGNCC	8 cut(s)	193, 626, 655, 1061, 1172, 1953, 1954, 2355
PspPPI	RGGWCCY	1 cut(s)	626
PspXI	VCTCGAGB	2 cut(s)	1712, 1809
PsrI	GAACNNNNNNTAC	2 cut(s)	865, 897
PstI	CTGCAG	2 cut(s)	1105, 1822
PstNI	CAGNNNCTG	2 cut(s)	1073, 2395
PsuI	RGATCY	1 cut(s)	830
PvuI	CGATCG	1 cut(s)	77
PvuII	CAGCTG	1 cut(s)	1919
RsaI	GTAC	6 cut(s)	634, 662, 788, 1309, 1723, 1816
RsaNI	GTAC	6 cut(s)	633, 661, 787, 1308, 1722, 1815
RseI	CAYNNNNRTG	3 cut(s)	66, 1154, 2229
SacI	GAGCTC	1 cut(s)	1051
SaqAI	TTAA	6 cut(s)	419, 507, 939, 1412, 1461, 2298
Sau96I	GGNCC	8 cut(s)	193, 626, 655, 1061, 1172, 1953, 1954, 2355
ScaI	AGTACT	1 cut(s)	1309
SchI	GAGTC	2 cut(s)	356, 1191
ScrFI	CCNGG	7 cut(s)	49, 528, 630, 1068, 1419, 1557, 2390
SduI	GDGCHC	8 cut(s)	993, 1051, 1219, 1603, 1630, 1957, 2101, 2388
SexAI	ACCWGGT	1 cut(s)	628
SfaNI	GCATC	2 cut(s)	706, 1237
SfcI	CTRYAG	4 cut(s)	1101, 1659, 1818, 2080
SfiI	GGCCNNNNNGGCC	1 cut(s)	200
Sfr274I	CTCGAG	2 cut(s)	1712, 1809
SfuI	TTCGAA	1 cut(s)	2310
SinI	GGWCC	3 cut(s)	626, 1172, 2355
SlaI	CTCGAG	2 cut(s)	1712, 1809
SmiMI	CAYNNNNRTG	3 cut(s)	66, 1154, 2229
SmlI	CTYRAG	6 cut(s)	400, 998, 1712, 1809, 2240, 2381
SmoI	CTYRAG	6 cut(s)	400, 998, 1712, 1809, 2240, 2381
SphI	GCATGC	1 cut(s)	1751
SseBI	AGGCCT	3 cut(s)	203, 1387, 1417
SsiI	CCGC	8 cut(s)	80, 116, 191, 428, 850, 888, 1655, 2345
SspI	AATATT	3 cut(s)	679, 1230, 1479
SspMI	CTAG	3 cut(s)	869, 1088, 1221
SstI	GAGCTC	1 cut(s)	1051
StuI	AGGCCT	3 cut(s)	203, 1387, 1417
StyD4I	CCNGG	7 cut(s)	47, 526, 628, 1066, 1417, 1555, 2388
StyI	CCWWGG	3 cut(s)	303, 622, 1869
TaaI	ACNGT	8 cut(s)	743, 1176, 1726, 1785, 2152, 2202, 2306, 2335
TatI	WGTACW	2 cut(s)	660, 1307
TauI	GCSGC	2 cut(s)	194, 1658
TfiI	GAWTC	6 cut(s)	359, 692, 906, 1003, 1109, 2057
Tru1I	TTAA	6 cut(s)	419, 507, 939, 1412, 1461, 2298
Tru9I	TTAA	6 cut(s)	419, 507, 939, 1412, 1461, 2298
TscAI	CASTG	5 cut(s)	226, 1078, 1635, 2023, 2340
TseFI	GTSAC	5 cut(s)	1469, 1633, 1795, 1975, 2018
TseI	GCWGC	8 cut(s)	179, 1544, 1610, 1642, 1820, 1876, 1916, 2085
Tsp45I	GTSAC	5 cut(s)	1469, 1633, 1795, 1975, 2018
TspDTI	ATGAA	8 cut(s)	372, 975, 1138, 1530, 1608, 1866, 2049, 2340
TspGWI	ACGGA	2 cut(s)	16, 1110
TspRI	CASTG	5 cut(s)	226, 1078, 1635, 2023, 2340
Van91I	CCANNNNNTGG	1 cut(s)	1073
VneI	GTGCAC	2 cut(s)	989, 1626
VpaK11BI	GGWCC	3 cut(s)	626, 1172, 2355
XagI	CCTNNNNNAGG	2 cut(s)	1411, 2240
XapI	RAATTY	5 cut(s)	52, 318, 415, 983, 1035
XceI	RCATGY	2 cut(s)	1751, 1778
XhoI	CTCGAG	2 cut(s)	1712, 1809
XmnI	GAANNNNTTC	1 cut(s)	2220
XspI	CTAG	3 cut(s)	869, 1088, 1221
ZrmI	AGTACT	1 cut(s)	1309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.