Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002584

Physical Location & Seq

Genomic Coordinates Reverse (-)

71780388 .. 71786137

Gene Structure 5750 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34169

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGATTTTTTCAAGGATTGGTCGCTCCTTATCTCGATCCTCTCGCTCCAGGAATTTGCTTTCTCGAAATGGGCGATCGGCGGCGGCTGAAGGGCTTTTGGGAGTGCCGGGTTCGGGTTCGTATCTGGGTCGGGTCGATGGGGATTTAGGGTTTATGAGGACCTATATTGCTTCGGCAATAGGAGCGCACAAGACCCATGTTTCTGATTTGAGTTACATTCTAGGGAACCCTAAATTTGTGAGACTGTTTTCCAGTGAAGCCCCAAAGAAAAAGAATTTTGAGAACTTCTATCCCAAGGAAAAGAAAGAAATCCCGAAAGGGAATGATCAGAAATCCGAGTCCAAAGAGGAGTCGAGCACCGATGACCAGGGGAGTTTCCAGGAAACTTTCTTAAAGCAGTTCCAGAATTTAGTCCCTTTATTATTGATCGGGCTATTTTTCTCTTCATTTTCTTTTGGCTCCAGTGAACAGAAACAGATAAGTTTCCAAGAGTTTAAAAACAAACTTCTGGAACCAGGTTTGGTCGATCATATAGTTGTTTCTAATAAATCAGTTGCAAAAGTATTTGTACGTAGCTCACCACGCAGTCAAACAAGTGATGAAGTTGTCGAAGGAACTATTAATGGTACCGCTGCTCGTGGAAAAGGGGGCGAGTATAAGTACTTCTTCAATATTGGAAGTGTTGAAAATTTTGAGGAGAAGTTGGAGGATGCCCAGGAAGCTCTGGGGATAGATTCTCATGATTATGTTCCTGTTACATATGTCTCTGAAATGGTTTGGTATCAAGAATTGATGAGGTTTGCACCAACATTAATCCTTCTGGGAACCCTCATGTATATGGGGAGGAGAATGCAGGGTGGACTAGGCATTGGTGGTGGTTCTGGTGGCCGGAGTGGTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACGAAAGTAGATAAAAATGCAAAGAATAAGATCTACTTTAAAGATGTTGCCGGTTGCGATGAAGCAAAGCAAGAGATCATGGAATTTGTGCATTTTCTGAAGAACCCAAAAAAGTATGAGGATTTGGGAGCTAAAATTCCCAAAGGTGCTCTATTGGTAGGTCCTCCAGGCACAGGAAAGACCCTTCTAGCAAAAGCAACAGCAGGGGAATCTGGTGTACCTTTCCTATCTATATCTGGATCAGATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAGAAGCAAGGCAATGTGCTCCTAGTATTATATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGGGGGCGTGGGGGCTTCTCAGGGTCCAATGATGAGCGTGAAAGCACTCTAAATCAATTGCTGGTAGAAATGGATGGCTTTGGAACAACTGCTGGAGTAGTTGTGCTTGCTGGAACCAATAGGCCTGATATTTTGGACAAAGCCTTACTAAGGCCTGGTCGATTTGATCGTCAGATTAGCATTGACAAACCTGATATTAAAGGCCGTGATCAGATATTTCAGATATACTTGAAAAAACTCAAACTTGATCAGGAGCCTTCATATTACTCTCAAAGGCTTGCAGCTCTGACTCCAGGATTTGCTGGAGCAGACATTGCCAATGTTTGCAATGAAGGTGCTTTAATTGCTGCCAGGAATGAAAGTGCACTAATCACGATGCAGCATTTTGAGTCGGCTATAGATAGGATAATAGGTGGTCTGGAAAAGAAGAACAGGGTTATTAGCAAGCTTGAACGCCGCACTGTTGCCTACCATGAGTCAGGGCATGCTGTAGCAGGATGGTTCTTAGAGCATGCAGAACCTTTGCTAAAAGTGACCATCGTTCCTCGAGGTACAGCAGCACTTGGGTTCGCCCAGTATGTTCCAAATGAAAACCTCCTTATGACCAAGGAGCAGCTTTTTGATATGACTTGCATGACCCTTGGTGGTAGAGCAGCTGAACAGGTTCTGTTGGGAAAAATTTCGACGGGAGCCCAAAACGATTTGGAGAAGGTGACAAAGATGACGTATGCCCAAGTTGCAGTTTATGGTTTTAGTGACAAGGTGGGTCTTCTTTCTTTCCCTCAAAGAGATGACGGGTTTGAGATGTCAAAGCCCTACAGCAGTAAGACTGCAGCCCTTATTGATGGTGAAGTACGCGAATGGGTGGGCAAGGCTTATGCACACACACTTGCACTCCTAGAAGAACACAAAGATCAAGTGGCTCAAATTGCAGAATTGTTGCTTGAAAAGGAAGTTCTTCACCAAGATGACCTTCTCAGGGTTTTGGGAGAGAGACCATACAAGTCAAGTGAAGTGAGCAATTATGATAGATTTAAGCAAGGTTTTGAAGATACAGATGAGAAAACTGTTGAGGTCCCCTCTAGTGTCGGGCATGAGCCGTCTTCACCTCTAGAGCCTCAGGTTCTCCCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0042221 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

809

Amino Acids

89.0

Weight (kDa)

6.75

Isoelectric Point (pI)

34.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	138 - 247	1.4e-13	FtsH Extracellular
AAA	PF00004	361 - 493	8.8e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	523 - 561	1.3e-10	AAA+ lid domain
Peptidase_M41	PF01434	576 - 758	5.3e-65	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07510 AT2G29080
fragaria_vesca	FvH4_3g36790 FvH4_3g36790 FvH4_3g36790 FvH4_6g13480 FvH4_6g13480 FvH4_6g13480
malus_domestica	MD03G1088300.v1.1 MD03G1088400.v1.1 MD04G1130900.v1.1 MD11G1097400.v1.1 MD12G1144000.v1.1
prunus_persica	Prupe.6G072600_v2.0.a1 Prupe.6G257400_v2.0.a1 Prupe.6G257400_v2.0.a1
pyrus_communis	pycom03g06980 pycom03g07000 pycom04g11920 pycom11g08210 pycom12g13860
rosa_chinensis	RchiOBHm_Chr3g0466351 RchiOBHm_Chr5g0065851
rosa_laevigata	RLG00000024582 RLG00000035821
rosa_multiflora	Rmu_sc0003480.1_g000012 Rmu_sc0042868.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015310 Rroxscaffold_6G00414550
rosa_rugosa	Rorug03G0081200 Rorug05G0374100 Rorug05G0374200 Rorug05G0374300
rosa_samantha	Rh3BG148900 Rh3DG149600 Rh5BG449200 Rh5CG471400 Rh5DG462800
rosa_wichuraiana	Rw3G012050 Rw5G040600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1839
Acc65I	GGTACC	1 cut(s)	626
AccB1I	GGYRCC	1 cut(s)	626
AccII	CGCG	1 cut(s)	2151
AciI	CCGC	4 cut(s)	80, 83, 630, 1750
AclWI	GGATC	2 cut(s)	30, 1177
AcoI	YGGCCR	1 cut(s)	886
AcsI	RAATTY	8 cut(s)	52, 233, 274, 406, 688, 1013, 1065, 1971
AcuI	CTGAAG	2 cut(s)	108, 1049
AfaI	GTAC	6 cut(s)	570, 628, 662, 1149, 1846, 2148
AfiI	CCNNNNNNNGG	4 cut(s)	113, 1103, 1443, 2272
AgsI	TTSAA	9 cut(s)	12, 670, 686, 910, 1229, 1525, 1745, 2240, 2342
AjnI	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
AjuI	GAANNNNNNNTTGG	2 cut(s)	2250, 2282
AluBI	AGCT	7 cut(s)	576, 722, 1061, 1577, 1741, 1909, 1949
AluI	AGCT	7 cut(s)	576, 722, 1061, 1577, 1741, 1909, 1949
Alw21I	GWGCWC	4 cut(s)	359, 1081, 1249, 1660
Alw26I	GTCTC	3 cut(s)	235, 769, 2281
Alw44I	GTGCAC	1 cut(s)	1656
AlwI	GGATC	2 cut(s)	30, 1177
AlwNI	CAGNNNCTG	1 cut(s)	1960
Ama87I	CYCGRG	1 cut(s)	1839
AoxI	GGCC	4 cut(s)	886, 1415, 1445, 1495
ApaLI	GTGCAC	1 cut(s)	1656
ApeKI	GCWGC	8 cut(s)	632, 1574, 1640, 1672, 1850, 1906, 1946, 2126
ApoI	RAATTY	8 cut(s)	52, 233, 274, 406, 688, 1013, 1065, 1971
AseI	ATTAAT	2 cut(s)	621, 812
Asp700I	GAANNNNTTC	3 cut(s)	1956, 1972, 2250
Asp718I	GGTACC	1 cut(s)	626
AspLEI	GCGC	1 cut(s)	187
AspS9I	GGNCC	5 cut(s)	159, 1091, 1202, 1317, 2368
AsuC2I	CCSGG	1 cut(s)	108
AsuHPI	GGTGA	5 cut(s)	570, 2017, 2153, 2246, 2391
AvaI	CYCGRG	1 cut(s)	1839
AvaII	GGWCC	5 cut(s)	159, 1091, 1202, 1317, 2368
AxyI	CCTNAGG	1 cut(s)	2412
BaeGI	GKGCMC	1 cut(s)	1660
BanI	GGYRCC	1 cut(s)	626
BanII	GRGCYC	1 cut(s)	1987
BarI	GAAGNNNNNNTAC	2 cut(s)	647, 679
BauI	CACGAG	1 cut(s)	636
BbsI	GAAGAC	2 cut(s)	2054, 2388
Bbv12I	GWGCWC	4 cut(s)	359, 1081, 1249, 1660
BbvI	GCAGC	8 cut(s)	619, 1586, 1627, 1684, 1862, 1918, 1958, 2138
BccI	CCATC	5 cut(s)	131, 1361, 1785, 1838, 2132
BceAI	ACGGC	2 cut(s)	1482, 2377
BciT130I	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BclI	TGATCA	3 cut(s)	325, 1501, 1540
BcnI	CCSGG	1 cut(s)	108
BcoDI	GTCTC	3 cut(s)	235, 769, 2281
BfaI	CTAG	7 cut(s)	221, 863, 1118, 1251, 2192, 2376, 2405
BfmI	CTRYAG	4 cut(s)	1689, 1782, 2110, 2124
BglII	AGATCT	1 cut(s)	960
BmcAI	AGTACT	1 cut(s)	662
Bme18I	GGWCC	5 cut(s)	159, 1091, 1202, 1317, 2368
BmeT110I	CYCGRG	1 cut(s)	1839
BmgT120I	GGNCC	5 cut(s)	159, 1091, 1202, 1317, 2368
BmrI	ACTGGG	1 cut(s)	1861
BmsI	GCATC	3 cut(s)	700, 1267, 1659
BmuI	ACTGGG	1 cut(s)	1861
BpiI	GAAGAC	2 cut(s)	2054, 2388
BplI	GAGNNNNNCTC	2 cut(s)	2357, 2389
BpmI	CTGGAG	6 cut(s)	31, 445, 1080, 1407, 1569, 1617
BpuMI	CCSGG	1 cut(s)	108
BsaAI	YACGTR	1 cut(s)	572
BsaI	GGTCTC	1 cut(s)	2281
BsaJI	CCNNGG	5 cut(s)	294, 367, 714, 1899, 1933
BsaXI	ACNNNNNCTCC	6 cut(s)	883, 913, 1380, 1410, 2172, 2202
Bsc4I	CCNNNNNNNGG	4 cut(s)	113, 1103, 1443, 2272
Bse118I	RCCGGY	1 cut(s)	980
Bse1I	ACTGG	3 cut(s)	252, 462, 1867
Bse21I	CCTNAGG	1 cut(s)	2412
Bse3DI	GCAATG	3 cut(s)	1247, 1605, 1627
BseBI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BseDI	CCNNGG	5 cut(s)	294, 367, 714, 1899, 1933
BseGI	GGATG	3 cut(s)	715, 1372, 1796
BseLI	CCNNNNNNNGG	4 cut(s)	113, 1103, 1443, 2272
BseMI	GCAATG	3 cut(s)	1247, 1605, 1627
BseMII	CTCAG	3 cut(s)	1326, 2284, 2426
BseNI	ACTGG	3 cut(s)	252, 462, 1867
BseRI	GAGGAG	3 cut(s)	362, 710, 859
BseSI	GKGCMC	1 cut(s)	1660
BseXI	GCAGC	8 cut(s)	619, 1586, 1627, 1684, 1862, 1918, 1958, 2138
Bsh1236I	CGCG	1 cut(s)	2151
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	4 cut(s)	888, 1417, 1447, 1497
BshNI	GGYRCC	1 cut(s)	626
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	4 cut(s)	359, 1081, 1249, 1660
BsiHKCI	CYCGRG	1 cut(s)	1839
BsiSI	CCGG	3 cut(s)	107, 889, 981
BslFI	GGGAC	2 cut(s)	398, 2354
BslI	CCNNNNNNNGG	4 cut(s)	113, 1103, 1443, 2272
BsmAI	GTCTC	3 cut(s)	235, 769, 2281
BsmFI	GGGAC	2 cut(s)	398, 2354
BsmI	GAATGC	1 cut(s)	855
BsnI	GGCC	4 cut(s)	888, 1417, 1447, 1497
Bso31I	GGTCTC	1 cut(s)	2281
BsoBI	CYCGRG	1 cut(s)	1839
Bsp1286I	GDGCHC	5 cut(s)	359, 1081, 1249, 1660, 1987
BspACI	CCGC	4 cut(s)	80, 83, 630, 1750
BspANI	GGCC	4 cut(s)	888, 1417, 1447, 1497
BspCNI	CTCAG	3 cut(s)	1325, 2283, 2425
BspFNI	CGCG	1 cut(s)	2151
BspHI	TCATGA	1 cut(s)	739
BspMAI	CTGCAG	1 cut(s)	2128
BspPI	GGATC	2 cut(s)	30, 1177
BspT107I	GGYRCC	1 cut(s)	626
BspTNI	GGTCTC	1 cut(s)	2281
BsrDI	GCAATG	3 cut(s)	1247, 1605, 1627
BsrFI	RCCGGY	1 cut(s)	980
BsrI	ACTGG	3 cut(s)	252, 462, 1867
BssAI	RCCGGY	1 cut(s)	980
BssECI	CCNNGG	5 cut(s)	294, 367, 714, 1899, 1933
BssSI	CACGAG	1 cut(s)	636
BssT1I	CCWWGG	3 cut(s)	294, 1899, 1933
Bst2BI	CACGAG	1 cut(s)	636
Bst2UI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
Bst4CI	ACNGT	3 cut(s)	246, 1756, 2362
Bst6I	CTCTTC	1 cut(s)	448
BstAPI	GCANNNNNTGC	1 cut(s)	1607
BstBAI	YACGTR	1 cut(s)	572
BstC8I	GCNNGC	5 cut(s)	1401, 1572, 1739, 1779, 1806
BstDEI	CTNAG	6 cut(s)	1312, 1442, 1798, 2270, 2412, 2427
BstENI	CCTNNNNNAGG	1 cut(s)	1441
BstF5I	GGATG	3 cut(s)	715, 1372, 1796
BstFNI	CGCG	1 cut(s)	2151
BstHHI	GCGC	1 cut(s)	187
BstMAI	GTCTC	3 cut(s)	235, 769, 2281
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 582, 719, 1607, 1637, 2030, 2222
BstNI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BstNSI	RCATGY	2 cut(s)	1781, 1808
BstSFI	CTRYAG	4 cut(s)	1689, 1782, 2110, 2124
BstSLI	GKGCMC	1 cut(s)	1660
BstSNI	TACGTA	1 cut(s)	572
BstUI	CGCG	1 cut(s)	2151
BstV1I	GCAGC	8 cut(s)	619, 1586, 1627, 1684, 1862, 1918, 1958, 2138
BstV2I	GAAGAC	2 cut(s)	2054, 2388
BstX2I	RGATCY	1 cut(s)	960
BstYI	RGATCY	1 cut(s)	960
Bsu36I	CCTNAGG	1 cut(s)	2412
BsuRI	GGCC	4 cut(s)	888, 1417, 1447, 1497
BtgZI	GCGATG	1 cut(s)	1002
BtsCI	GGATG	3 cut(s)	715, 1372, 1796
BtsIMutI	CAGTG	3 cut(s)	259, 469, 1752
Cac8I	GCNNGC	5 cut(s)	1401, 1572, 1739, 1779, 1806
CaiI	CAGNNNCTG	1 cut(s)	1960
CciI	TCATGA	1 cut(s)	739
CfoI	GCGC	1 cut(s)	187
Cfr10I	RCCGGY	1 cut(s)	980
Cfr13I	GGNCC	5 cut(s)	159, 1091, 1202, 1317, 2368
CsiI	ACCWGGT	1 cut(s)	514
Csp6I	GTAC	6 cut(s)	569, 627, 661, 1148, 1845, 2147
CviQI	GTAC	6 cut(s)	569, 627, 661, 1148, 1845, 2147
DdeI	CTNAG	6 cut(s)	1312, 1442, 1798, 2270, 2412, 2427
DraI	TTTAAA	2 cut(s)	496, 970
EaeI	YGGCCR	1 cut(s)	886
Eam1104I	CTCTTC	1 cut(s)	448
EarI	CTCTTC	1 cut(s)	448
Eco105I	TACGTA	1 cut(s)	572
Eco130I	CCWWGG	3 cut(s)	294, 1899, 1933
Eco147I	AGGCCT	2 cut(s)	1417, 1447
Eco24I	GRGCYC	1 cut(s)	1987
Eco31I	GGTCTC	1 cut(s)	2281
Eco47I	GGWCC	5 cut(s)	159, 1091, 1202, 1317, 2368
Eco57I	CTGAAG	2 cut(s)	108, 1049
Eco81I	CCTNAGG	1 cut(s)	2412
Eco88I	CYCGRG	1 cut(s)	1839
EcoNI	CCTNNNNNAGG	1 cut(s)	1441
EcoO109I	RGGNCCY	3 cut(s)	159, 1091, 2368
EcoRII	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
EcoT14I	CCWWGG	3 cut(s)	294, 1899, 1933
EcoT38I	GRGCYC	1 cut(s)	1987
ErhI	CCWWGG	3 cut(s)	294, 1899, 1933
FalI	AAGNNNNNCTT	6 cut(s)	650, 682, 950, 982, 2250, 2282
FaqI	GGGAC	2 cut(s)	398, 2354
FauNDI	CATATG	1 cut(s)	760
FbaI	TGATCA	3 cut(s)	325, 1501, 1540
FokI	GGATG	3 cut(s)	722, 1379, 1803
FriOI	GRGCYC	1 cut(s)	1987
FspBI	CTAG	7 cut(s)	221, 863, 1118, 1251, 2192, 2376, 2405
GlaI	GCGC	1 cut(s)	186
GsuI	CTGGAG	6 cut(s)	31, 445, 1080, 1407, 1569, 1617
HaeIII	GGCC	4 cut(s)	888, 1417, 1447, 1497
HapII	CCGG	3 cut(s)	107, 889, 981
HhaI	GCGC	1 cut(s)	187
Hin6I	GCGC	1 cut(s)	185
HinP1I	GCGC	1 cut(s)	185
HindIII	AAGCTT	1 cut(s)	1739
HinfI	GANTC	7 cut(s)	338, 350, 734, 1139, 1582, 1682, 1769
HpaII	CCGG	3 cut(s)	107, 889, 981
HphI	GGTGA	5 cut(s)	570, 2017, 2153, 2246, 2391
Hpy166II	GTNNAC	4 cut(s)	467, 860, 1148, 1658
Hpy8I	GTNNAC	4 cut(s)	467, 860, 1148, 1658
Hpy99I	CGWCG	1 cut(s)	1981
HpyAV	CCTTC	9 cut(s)	83, 605, 827, 1124, 1215, 1560, 1619, 1996, 2276
HpyCH4III	ACNGT	3 cut(s)	246, 1756, 2362
HpyCH4IV	ACGT	2 cut(s)	571, 2018
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 582, 719, 1607, 1637, 2030, 2222
HpyF3I	CTNAG	6 cut(s)	1312, 1442, 1798, 2270, 2412, 2427
HpySE526I	ACGT	2 cut(s)	571, 2018
HspAI	GCGC	1 cut(s)	185
KpnI	GGTACC	1 cut(s)	630
Ksp22I	TGATCA	3 cut(s)	325, 1501, 1540
Lsp1109I	GCAGC	8 cut(s)	619, 1586, 1627, 1684, 1862, 1918, 1958, 2138
LweI	GCATC	3 cut(s)	700, 1267, 1659
MabI	ACCWGGT	1 cut(s)	514
MaeI	CTAG	7 cut(s)	221, 863, 1118, 1251, 2192, 2376, 2405
MaeII	ACGT	2 cut(s)	571, 2018
MaeIII	GTNAC	6 cut(s)	212, 754, 928, 1825, 2005, 2048
MboII	GAAGA	9 cut(s)	435, 658, 1042, 1732, 2054, 2207, 2243, 2354, 2388
MfeI	CAATTG	2 cut(s)	1281, 1349
MflI	RGATCY	1 cut(s)	960
MhlI	GDGCHC	5 cut(s)	359, 1081, 1249, 1660, 1987
MlyI	GAGTC	5 cut(s)	347, 359, 1576, 1691, 1778
MmeI	TCCRAC	2 cut(s)	684, 1180
MroXI	GAANNNNTTC	3 cut(s)	1956, 1972, 2250
MseI	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 2328
MslI	CAYNNNNRTG	4 cut(s)	744, 836, 1184, 2259
MspA1I	CMGCKG	2 cut(s)	632, 1949
MspI	CCGG	3 cut(s)	107, 889, 981
MunI	CAATTG	2 cut(s)	1281, 1349
Mva1269I	GAATGC	1 cut(s)	855
MvaI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
MvnI	CGCG	1 cut(s)	2151
MwoI	GCNNNNNNNGC	7 cut(s)	182, 582, 719, 1607, 1637, 2030, 2222
NciI	CCSGG	1 cut(s)	108
NdeI	CATATG	1 cut(s)	760
NmuCI	GTSAC	3 cut(s)	1825, 2005, 2048
NspI	RCATGY	2 cut(s)	1781, 1808
PaeI	GCATGC	2 cut(s)	1781, 1808
PaeR7I	CTCGAG	1 cut(s)	1839
PagI	TCATGA	1 cut(s)	739
PceI	AGGCCT	2 cut(s)	1417, 1447
PcsI	WCGNNNNNNNCGW	2 cut(s)	70, 1459
PctI	GAATGC	1 cut(s)	855
PdmI	GAANNNNTTC	3 cut(s)	1956, 1972, 2250
PfeI	GAWTC	2 cut(s)	734, 1139
PfoI	TCCNGGA	3 cut(s)	47, 378, 1585
Ple19I	CGATCG	1 cut(s)	77
PleI	GAGTC	5 cut(s)	346, 358, 1576, 1690, 1777
PpsI	GAGTC	5 cut(s)	346, 358, 1576, 1690, 1777
Ppu21I	YACGTR	1 cut(s)	572
PpuMI	RGGWCCY	3 cut(s)	159, 1091, 2368
PshBI	ATTAAT	2 cut(s)	621, 812
Psp5II	RGGWCCY	3 cut(s)	159, 1091, 2368
Psp6I	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
PspGI	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
PspPI	GGNCC	5 cut(s)	159, 1091, 1202, 1317, 2368
PspPPI	RGGWCCY	3 cut(s)	159, 1091, 2368
PspXI	VCTCGAGB	1 cut(s)	1839
PstI	CTGCAG	1 cut(s)	2128
PstNI	CAGNNNCTG	1 cut(s)	1960
PsuI	RGATCY	1 cut(s)	960
PvuI	CGATCG	1 cut(s)	77
PvuII	CAGCTG	1 cut(s)	1949
RsaI	GTAC	6 cut(s)	570, 628, 662, 1149, 1846, 2148
RsaNI	GTAC	6 cut(s)	569, 627, 661, 1148, 1845, 2147
RseI	CAYNNNNRTG	4 cut(s)	744, 836, 1184, 2259
SaqAI	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 2328
Sau96I	GGNCC	5 cut(s)	159, 1091, 1202, 1317, 2368
ScaI	AGTACT	1 cut(s)	662
SchI	GAGTC	5 cut(s)	347, 359, 1576, 1691, 1778
SduI	GDGCHC	5 cut(s)	359, 1081, 1249, 1660, 1987
SexAI	ACCWGGT	1 cut(s)	514
SfaNI	GCATC	3 cut(s)	700, 1267, 1659
SfcI	CTRYAG	4 cut(s)	1689, 1782, 2110, 2124
Sfr274I	CTCGAG	1 cut(s)	1839
SinI	GGWCC	5 cut(s)	159, 1091, 1202, 1317, 2368
SlaI	CTCGAG	1 cut(s)	1839
SmiMI	CAYNNNNRTG	4 cut(s)	744, 836, 1184, 2259
SmlI	CTYRAG	1 cut(s)	1839
SmoI	CTYRAG	1 cut(s)	1839
SnaBI	TACGTA	1 cut(s)	572
SphI	GCATGC	2 cut(s)	1781, 1808
SseBI	AGGCCT	2 cut(s)	1417, 1447
SsiI	CCGC	4 cut(s)	80, 83, 630, 1750
SspI	AATATT	2 cut(s)	673, 906
SspMI	CTAG	7 cut(s)	221, 863, 1118, 1251, 2192, 2376, 2405
StuI	AGGCCT	2 cut(s)	1417, 1447
StyI	CCWWGG	3 cut(s)	294, 1899, 1933
TaaI	ACNGT	3 cut(s)	246, 1756, 2362
TaiI	ACGT	2 cut(s)	574, 2021
TatI	WGTACW	1 cut(s)	660
TauI	GCSGC	3 cut(s)	83, 86, 1752
TfiI	GAWTC	2 cut(s)	734, 1139
Tru1I	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 2328
Tru9I	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 2328
TscAI	CASTG	3 cut(s)	259, 469, 1759
TseFI	GTSAC	3 cut(s)	1825, 2005, 2048
TseI	GCWGC	8 cut(s)	632, 1574, 1640, 1672, 1850, 1906, 1946, 2126
Tsp45I	GTSAC	3 cut(s)	1825, 2005, 2048
TspDTI	ATGAA	8 cut(s)	435, 615, 1005, 1168, 1542, 1638, 1665, 1896
TspRI	CASTG	3 cut(s)	259, 469, 1759
VneI	GTGCAC	1 cut(s)	1656
VpaK11BI	GGWCC	5 cut(s)	159, 1091, 1202, 1317, 2368
VspI	ATTAAT	2 cut(s)	621, 812
XagI	CCTNNNNNAGG	1 cut(s)	1441
XapI	RAATTY	8 cut(s)	52, 233, 274, 406, 688, 1013, 1065, 1971
XbaI	TCTAGA	1 cut(s)	2404
XceI	RCATGY	2 cut(s)	1781, 1808
XhoI	CTCGAG	1 cut(s)	1839
XmnI	GAANNNNTTC	3 cut(s)	1956, 1972, 2250
XspI	CTAG	7 cut(s)	221, 863, 1118, 1251, 2192, 2376, 2405
ZrmI	AGTACT	1 cut(s)	662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.