Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0002584

Physical Location & Seq

Genomic Coordinates Reverse (-)

14901600 .. 14905652

Gene Structure 4053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g11920.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2223 bp

ATGTCGAATGTGAAGTCTGTTTTCGGAATCCCTAGAATTCGTCGCTTGTTCTCCAGCCAAGGTCCCGGGAAGAAAAATTACGAAAATTATTATCCGAAAAATAAGAAGGAAATTCCGAAAGGGGGTGAACAGAAAACGGAGTCCAAAGAGGGCTCAAGTGCAGGTGGTCAGGGGAATGCCCAGGGACAGTTTTCGAAGCAGATTCAAGATTTAATTGCTCCCTTAATGTTCATTTGCTTTATTGTCACATCATTATTCCTTAATCCTCATCAAGCGAAGGAGATAAGTTTCCAAGAATTTAAAAACAAGCTACTTGAACCTGGGTTGGTTGATCACATTGAAGTGGCAAACAAATCAGTTGCAAAAGTGTATGTGAGGAGCTCCCCACGCGAAAAAGTTCATAGTGATGATTCTGTTAGTAGTCCTGTTAAAGGTTCTCCTTCCGAAGGAAATGTAACCCAGTATAAATATTATTTTAACATTGGGAGTGTTGAATCTTTCGAAGAAAAGTTGGAGGAAGCTCAAGAAGCTTTAGGGATTGACCGTCATGATTTTGTTCCTGTAATTTATGCATCCCAAGTAATGTGGTTGCAAGAGTTGTTAAGGTATGGGCCAACAGTATTGCTTCTGGGAGCCCTTTGGTTCATGAGCCGAAAAATGCCTAACATTGGTGGTCCAGGTGGAACAGGTGGCCGAGGCATATTCAACATAGGTAAAGCACAGATCACGAAGTTGGACAAGAATGCCAAAAACAAGGTTTACTTTAAAGATGTAGCTGGCTGTGATGAGGCTAAGCAAGAAATAATGGAGTTTGTGCACTTTCTAAAAAATCCTAAGAAATATGAGGAATTGGGAGCAAAAATTCCAAAAGGTGCTCTTCTTGTTGGCCCTCCTGGAACAGGAAAGACGCTTCTTGCAAAGGCAACTGCTGGTGAATCTGGGGTGCCTTTTCTATCTATATCTGGGTCAGATTTTATGGAAATGTTTGTTGGTGTTGGTCCGTCAAGGGTTCGAAGCTTATTTCAAGAGGCAAGACAGTGCGCACCCAGTATAATATTTATTGATGAGATCGATGCAATTGGCCGGGCAAGAGGGCGTGGAGGCTTTTCAGGTGGCCATGACGAGCGTGAAAGTACTCTCAATCAATTGCTTGTAGAAATGGATGGATTTGGAACCACTGCTGGAGTTGTTGTACTTGCTGGCACTAATAGGCCTGATATTCTGGATAAAGCTCTCTTGAGGCCAGGCCGGTTTGACCGTCAAATTACTATTGATAAACCAGACATCAAGGGTCGTAACCAGATTTTTCAAATATATCTGAGCAAGCTCAAGCTGGATCTGGAACCATCATTTTACTCTGAGAGGCTTGCTGCTCTCACTCCTGGATTTGCTGGAGCAGACATAGCAAACGTCTGCAATGAAGCTGCCTTGATTGCTGCAAGAAATGAGAGTCCAAAGATCACCATGAAACATTTTGAAGCGGCTATAGACAGGGTGATAGGCGGCCTAGAAAAGAAGAACAAGGTTATAAGCAAGCTGGAAAGACGGACTGTTGCTTACCATGAATCTGGTCATGCTGTTGCGGGTTGGTTCCTGGAACACGCAGAACCTTTGCTTAAAGTAACTATTGTTCCGCGTGGCACTGCAGCACTGGGGTTTGCTCAGTATGTGCCCAATGAAAATCTTCTTATGACCAAAGAGCAGCTTTTTGATATGACATGCATGACCCTTGGTGGCCGAGCTGCTGAGCAGGTTTTGTTGGGGAAGATTTCAACTGGAGCGCAGAACGACTTGGAGAAAGTGACCAAAATGACTTATGCTCAAGTTGCAGTGTATGGCTTCAGTGACAAGGTAGGTCTTCTTTCGTTTCCTCAGAGGGAGGATTCATTTGAGATGACCAAGCCATACAGTAGCAAAACTGGTGCAATAATTGACAGTGAAGTTAGAGAATGGGTGGGTAAAGCATACTTCCGCACTGTCCAGTTGATAGAGGAGCACAAAGAGCATGTAGGACAGATTGCAGAGCTGTTGCTGGAAAAGGAAGTCCTTCACCAAGAGGATTTGATTCGAGTACTGGGAGAACGCCCATTCAAGTCGAATGAGCCCACAAACTATGACAGATTCAAGGAAGGGTTCCAAGAAGAAGATAAGGAGGCTAAAGAGACCAATGCGAAGGATGGTCGGTCGCCACCCATTCAACCGGATGTCGTTGTGCCTGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

741

Amino Acids

81.81

Weight (kDa)

7.99

Isoelectric Point (pI)

37.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07510 AT2G29080
fragaria_vesca	FvH4_3g36790 FvH4_3g36790 FvH4_3g36790 FvH4_6g13480 FvH4_6g13480 FvH4_6g13480
malus_domestica	MD03G1088300.v1.1 MD03G1088400.v1.1 MD04G1130900.v1.1 MD11G1097400.v1.1 MD12G1144000.v1.1
prunus_persica	Prupe.6G072600_v2.0.a1 Prupe.6G257400_v2.0.a1 Prupe.6G257400_v2.0.a1
pyrus_communis	pycom03g06980 pycom03g07000 pycom04g11920 pycom11g08210 pycom12g13860
rosa_chinensis	RchiOBHm_Chr3g0466351 RchiOBHm_Chr5g0065851
rosa_laevigata	RLG00000024582 RLG00000035821
rosa_multiflora	Rmu_sc0003480.1_g000012 Rmu_sc0042868.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015310 Rroxscaffold_6G00414550
rosa_rugosa	Rorug03G0081200 Rorug05G0374100 Rorug05G0374200 Rorug05G0374300
rosa_samantha	Rh3BG148900 Rh3DG149600 Rh5BG449200 Rh5CG471400 Rh5DG462800
rosa_wichuraiana	Rw3G012050 Rw5G040600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1529
AarI	CACCTGC	1 cut(s)	152
Acc16I	TGCGCA	1 cut(s)	1042
Acc36I	ACCTGC	2 cut(s)	152, 1741
AccB1I	GGYRCC	1 cut(s)	943
AccII	CGCG	2 cut(s)	390, 1636
AciI	CCGC	5 cut(s)	1481, 1503, 1583, 1634, 1972
AclWI	GGATC	1 cut(s)	1344
AcoI	YGGCCR	4 cut(s)	691, 1081, 1114, 1735
AcsI	RAATTY	4 cut(s)	36, 111, 296, 861
AcuI	CTGAAG	1 cut(s)	1825
AfaI	GTAC	3 cut(s)	1135, 1194, 2073
AfiI	CCNNNNNNNGG	5 cut(s)	122, 431, 446, 668, 899
AjnI	CCWGG	7 cut(s)	180, 319, 676, 892, 1243, 1381, 1593
AjuI	GAANNNNNNNTTGG	2 cut(s)	972, 1004
Alw21I	GWGCWC	4 cut(s)	383, 819, 877, 1998
Alw26I	GTCTC	1 cut(s)	2156
Alw44I	GTGCAC	1 cut(s)	815
AlwI	GGATC	1 cut(s)	1344
Ama87I	CYCGRG	1 cut(s)	65
ApaLI	GTGCAC	1 cut(s)	815
ApeKI	GCWGC	6 cut(s)	1370, 1424, 1436, 1646, 1702, 1742
ApoI	RAATTY	4 cut(s)	36, 111, 296, 861
ArsI	GACNNNNNNTTYG	1 cut(s)	31
Asp700I	GAANNNNTTC	3 cut(s)	396, 1683, 2046
AspLEI	GCGC	2 cut(s)	1043, 1783
AspS9I	GGNCC	5 cut(s)	62, 611, 674, 887, 998
AsuC2I	CCSGG	3 cut(s)	66, 67, 1085
AsuHPI	GGTGA	5 cut(s)	137, 944, 1453, 1507, 2042
AsuII	TTCGAA	3 cut(s)	194, 501, 1012
AvaI	CYCGRG	1 cut(s)	65
AvaII	GGWCC	3 cut(s)	62, 674, 998
BaeGI	GKGCMC	2 cut(s)	819, 1674
BalI	TGGCCA	1 cut(s)	1116
BanI	GGYRCC	1 cut(s)	943
BanII	GRGCYC	4 cut(s)	155, 383, 637, 2106
BarI	GAAGNNNNNNTAC	2 cut(s)	62, 94
BbsI	GAAGAC	1 cut(s)	1850
Bbv12I	GWGCWC	4 cut(s)	383, 819, 877, 1998
BbvI	GCAGC	6 cut(s)	1357, 1411, 1423, 1658, 1714, 1729
BccI	CCATC	3 cut(s)	1157, 1354, 2171
BciT130I	CCWGG	7 cut(s)	182, 321, 678, 894, 1245, 1383, 1595
BclI	TGATCA	1 cut(s)	331
BcnI	CCSGG	3 cut(s)	66, 67, 1085
BcoDI	GTCTC	1 cut(s)	2156
BfaI	CTAG	2 cut(s)	33, 1508
BfmI	CTRYAG	2 cut(s)	1485, 1644
BfuAI	ACCTGC	2 cut(s)	152, 1741
BisI	GCNGC	8 cut(s)	1371, 1425, 1437, 1482, 1504, 1647, 1703, 1743
BlpI	GCTNAGC	2 cut(s)	792, 1746
BlsI	GCNGC	8 cut(s)	1372, 1426, 1438, 1483, 1505, 1648, 1704, 1744
BmcAI	AGTACT	2 cut(s)	1135, 2073
Bme18I	GGWCC	3 cut(s)	62, 674, 998
BmeT110I	CYCGRG	1 cut(s)	65
BmgT120I	GGNCC	5 cut(s)	62, 611, 674, 887, 998
BmiI	GGNNCC	7 cut(s)	64, 634, 945, 1174, 1344, 1592, 2135
BmrI	ACTGGG	4 cut(s)	454, 1041, 1661, 2084
BmsI	GCATC	2 cut(s)	581, 1063
BmuI	ACTGGG	4 cut(s)	454, 1041, 1661, 2084
BpiI	GAAGAC	1 cut(s)	1850
BpmI	CTGGAG	4 cut(s)	37, 1203, 1413, 1797
Bpu1102I	GCTNAGC	2 cut(s)	792, 1746
Bpu14I	TTCGAA	3 cut(s)	194, 501, 1012
BpuEI	CTTGAG	5 cut(s)	139, 507, 1258, 1313, 1806
BpuMI	CCSGG	3 cut(s)	66, 67, 1085
Bsa29I	ATCGAT	1 cut(s)	1071
BsaI	GGTCTC	1 cut(s)	2156
BsaJI	CCNNGG	7 cut(s)	58, 65, 180, 181, 320, 694, 1729
BsaWI	WCCGGW	1 cut(s)	2200
BsaXI	ACNNNNNCTCC	2 cut(s)	1176, 1206
Bsc4I	CCNNNNNNNGG	5 cut(s)	122, 431, 446, 668, 899
Bse118I	RCCGGY	1 cut(s)	1248
Bse1I	ACTGG	7 cut(s)	460, 1047, 1656, 1780, 1924, 1981, 2079
Bse3DI	GCAATG	1 cut(s)	1423
BseBI	CCWGG	7 cut(s)	182, 321, 678, 894, 1245, 1383, 1595
BseCI	ATCGAT	1 cut(s)	1071
BseDI	CCNNGG	7 cut(s)	58, 65, 180, 181, 320, 694, 1729
BseGI	GGATG	4 cut(s)	572, 1168, 2182, 2209
BseLI	CCNNNNNNNGG	5 cut(s)	122, 431, 446, 668, 899
BseMI	GCAATG	1 cut(s)	1423
BseMII	CTCAG	5 cut(s)	1310, 1350, 1676, 1737, 1886
BseNI	ACTGG	7 cut(s)	460, 1047, 1656, 1780, 1924, 1981, 2079
BseRI	GAGGAG	2 cut(s)	391, 2006
BseSI	GKGCMC	2 cut(s)	819, 1674
BseXI	GCAGC	6 cut(s)	1357, 1411, 1423, 1658, 1714, 1729
BsgI	GTGCAG	1 cut(s)	180
Bsh1236I	CGCG	2 cut(s)	390, 1636
Bsh1285I	CGRYCG	1 cut(s)	2186
BshNI	GGYRCC	1 cut(s)	943
BshVI	ATCGAT	1 cut(s)	1071
BsiEI	CGRYCG	1 cut(s)	2186
BsiHKAI	GWGCWC	4 cut(s)	383, 819, 877, 1998
BsiHKCI	CYCGRG	1 cut(s)	65
BsiSI	CCGG	4 cut(s)	66, 1084, 1249, 2201
BslFI	GGGAC	2 cut(s)	48, 198
BslI	CCNNNNNNNGG	5 cut(s)	122, 431, 446, 668, 899
BsmAI	GTCTC	1 cut(s)	2156
BsmFI	GGGAC	2 cut(s)	48, 198
BsmI	GAATGC	2 cut(s)	181, 748
Bso31I	GGTCTC	1 cut(s)	2156
BsoBI	CYCGRG	1 cut(s)	65
Bsp119I	TTCGAA	3 cut(s)	194, 501, 1012
Bsp1286I	GDGCHC	8 cut(s)	155, 383, 637, 819, 877, 1674, 1998, 2106
Bsp143I	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
Bsp1720I	GCTNAGC	2 cut(s)	792, 1746
BspACI	CCGC	5 cut(s)	1481, 1503, 1583, 1634, 1972
BspCNI	CTCAG	5 cut(s)	1311, 1351, 1675, 1738, 1885
BspDI	ATCGAT	1 cut(s)	1071
BspFNI	CGCG	2 cut(s)	390, 1636
BspHI	TCATGA	2 cut(s)	547, 645
BspLI	GGNNCC	7 cut(s)	64, 634, 945, 1174, 1344, 1592, 2135
BspMAI	CTGCAG	1 cut(s)	1648
BspMI	ACCTGC	2 cut(s)	152, 1741
BspPI	GGATC	1 cut(s)	1344
BspQI	GCTCTTC	1 cut(s)	882
BspT104I	TTCGAA	3 cut(s)	194, 501, 1012
BspT107I	GGYRCC	1 cut(s)	943
BspTNI	GGTCTC	1 cut(s)	2156
BsrDI	GCAATG	1 cut(s)	1423
BsrFI	RCCGGY	1 cut(s)	1248
BsrI	ACTGG	7 cut(s)	460, 1047, 1656, 1780, 1924, 1981, 2079
BssAI	RCCGGY	1 cut(s)	1248
BssECI	CCNNGG	7 cut(s)	58, 65, 180, 181, 320, 694, 1729
BssMI	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
BssT1I	CCWWGG	2 cut(s)	58, 1729
Bst2UI	CCWGG	7 cut(s)	182, 321, 678, 894, 1245, 1383, 1595
Bst4CI	ACNGT	9 cut(s)	189, 545, 619, 1038, 1259, 1552, 1910, 1937, 1978
Bst6I	CTCTTC	1 cut(s)	882
BstBI	TTCGAA	3 cut(s)	194, 501, 1012
BstC8I	GCNNGC	6 cut(s)	778, 1201, 1325, 1368, 1535, 2217
BstDEI	CTNAG	7 cut(s)	792, 834, 1319, 1359, 1662, 1746, 1872
BstENI	CCTNNNNNAGG	3 cut(s)	429, 444, 897
BstF5I	GGATG	4 cut(s)	572, 1168, 2182, 2209
BstFNI	CGCG	2 cut(s)	390, 1636
BstHHI	GCGC	2 cut(s)	1043, 1783
BstKTI	GATC	5 cut(s)	334, 726, 1071, 1339, 1461
BstMAI	GTCTC	1 cut(s)	2156
BstMBI	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
BstMCI	CGRYCG	1 cut(s)	2186
BstMWI	GCNNNNNNNGC	6 cut(s)	387, 527, 1403, 1433, 1826, 2002
BstNI	CCWGG	7 cut(s)	182, 321, 678, 894, 1245, 1383, 1595
BstNSI	RCATGY	2 cut(s)	1722, 2009
BstSFI	CTRYAG	2 cut(s)	1485, 1644
BstSLI	GKGCMC	2 cut(s)	819, 1674
BstUI	CGCG	2 cut(s)	390, 1636
BstV1I	GCAGC	6 cut(s)	1357, 1411, 1423, 1658, 1714, 1729
BstV2I	GAAGAC	1 cut(s)	1850
BstX2I	RGATCY	1 cut(s)	1336
BstXI	CCANNNNNNTGG	1 cut(s)	1568
BstYI	RGATCY	1 cut(s)	1336
Bsu15I	ATCGAT	1 cut(s)	1071
BsuTUI	ATCGAT	1 cut(s)	1071
BtsCI	GGATG	4 cut(s)	572, 1168, 2182, 2209
BtsI	GCAGTG	3 cut(s)	1176, 1641, 1836
BtsIMutI	CAGTG	8 cut(s)	1043, 1176, 1641, 1649, 1836, 1849, 1942, 1974
BveI	ACCTGC	2 cut(s)	152, 1741
Cac8I	GCNNGC	6 cut(s)	778, 1201, 1325, 1368, 1535, 2217
CciI	TCATGA	2 cut(s)	547, 645
CfoI	GCGC	2 cut(s)	1043, 1783
Cfr10I	RCCGGY	1 cut(s)	1248
Cfr13I	GGNCC	5 cut(s)	62, 611, 674, 887, 998
Cfr9I	CCCGGG	1 cut(s)	65
ClaI	ATCGAT	1 cut(s)	1071
CseI	GACGC	1 cut(s)	916
Csp6I	GTAC	3 cut(s)	1134, 1193, 2072
CspCI	CAANNNNNGTGG	2 cut(s)	566, 601
CviAII	CATG	9 cut(s)	548, 646, 1118, 1465, 1562, 1574, 1719, 1723, 2006
CviQI	GTAC	3 cut(s)	1134, 1193, 2072
DdeI	CTNAG	7 cut(s)	792, 834, 1319, 1359, 1662, 1746, 1872
DpnI	GATC	5 cut(s)	333, 725, 1070, 1338, 1460
DpnII	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
DraI	TTTAAA	2 cut(s)	301, 766
EaeI	YGGCCR	4 cut(s)	691, 1081, 1114, 1735
Eam1104I	CTCTTC	1 cut(s)	882
EarI	CTCTTC	1 cut(s)	882
Ecl136II	GAGCTC	1 cut(s)	381
Eco130I	CCWWGG	2 cut(s)	58, 1729
Eco147I	AGGCCT	1 cut(s)	1213
Eco24I	GRGCYC	4 cut(s)	155, 383, 637, 2106
Eco31I	GGTCTC	1 cut(s)	2156
Eco47I	GGWCC	3 cut(s)	62, 674, 998
Eco53kI	GAGCTC	1 cut(s)	381
Eco57I	CTGAAG	1 cut(s)	1825
Eco88I	CYCGRG	1 cut(s)	65
EcoICRI	GAGCTC	1 cut(s)	381
EcoNI	CCTNNNNNAGG	3 cut(s)	429, 444, 897
EcoO109I	RGGNCCY	1 cut(s)	62
EcoRI	GAATTC	1 cut(s)	36
EcoRII	CCWGG	7 cut(s)	180, 319, 676, 892, 1243, 1381, 1593
EcoT14I	CCWWGG	2 cut(s)	58, 1729
EcoT22I	ATGCAT	2 cut(s)	574, 1724
EcoT38I	GRGCYC	4 cut(s)	155, 383, 637, 2106
ErhI	CCWWGG	2 cut(s)	58, 1729
FaeI	CATG	9 cut(s)	551, 649, 1121, 1468, 1565, 1577, 1722, 1726, 2009
FalI	AAGNNNNNCTT	6 cut(s)	746, 778, 861, 893, 1689, 1721
FaqI	GGGAC	2 cut(s)	48, 198
FatI	CATG	9 cut(s)	547, 645, 1117, 1464, 1561, 1573, 1718, 1722, 2005
FauI	CCCGC	1 cut(s)	1576
FbaI	TGATCA	1 cut(s)	331
Fnu4HI	GCNGC	8 cut(s)	1371, 1425, 1437, 1482, 1504, 1647, 1703, 1743
FokI	GGATG	4 cut(s)	559, 1175, 2189, 2216
FriOI	GRGCYC	4 cut(s)	155, 383, 637, 2106
Fsp4HI	GCNGC	8 cut(s)	1371, 1425, 1437, 1482, 1504, 1647, 1703, 1743
FspAI	RTGCGCAY	1 cut(s)	1042
FspBI	CTAG	2 cut(s)	33, 1508
FspI	TGCGCA	1 cut(s)	1042
GlaI	GCGC	2 cut(s)	1042, 1782
GluI	GCNGC	8 cut(s)	1371, 1425, 1437, 1482, 1504, 1647, 1703, 1743
GsuI	CTGGAG	4 cut(s)	37, 1203, 1413, 1797
HapII	CCGG	4 cut(s)	66, 1084, 1249, 2201
HgaI	GACGC	1 cut(s)	916
HhaI	GCGC	2 cut(s)	1043, 1783
Hin1II	CATG	9 cut(s)	551, 649, 1121, 1468, 1565, 1577, 1722, 1726, 2009
Hin6I	GCGC	2 cut(s)	1041, 1781
HinP1I	GCGC	2 cut(s)	1041, 1781
HindIII	AAGCTT	2 cut(s)	528, 1015
HpaII	CCGG	4 cut(s)	66, 1084, 1249, 2201
HphI	GGTGA	5 cut(s)	137, 944, 1453, 1507, 2042
Hpy166II	GTNNAC	3 cut(s)	128, 760, 817
Hpy188I	TCNGA	8 cut(s)	26, 96, 117, 445, 970, 1320, 1360, 1875
Hpy188III	TCNNGA	9 cut(s)	206, 524, 548, 646, 727, 1025, 1223, 1237, 1340
Hpy8I	GTNNAC	3 cut(s)	128, 760, 817
Hpy99I	CGWCG	1 cut(s)	45
HpyAV	CCTTC	7 cut(s)	100, 271, 440, 450, 2057, 2123, 2167
HpyCH4III	ACNGT	9 cut(s)	189, 545, 619, 1038, 1259, 1552, 1910, 1937, 1978
HpyCH4IV	ACGT	1 cut(s)	1410
HpyF10VI	GCNNNNNNNGC	6 cut(s)	387, 527, 1403, 1433, 1826, 2002
HpyF3I	CTNAG	7 cut(s)	792, 834, 1319, 1359, 1662, 1746, 1872
HpySE526I	ACGT	1 cut(s)	1410
Hsp92II	CATG	9 cut(s)	551, 649, 1121, 1468, 1565, 1577, 1722, 1726, 2009
HspAI	GCGC	2 cut(s)	1041, 1781
Ksp22I	TGATCA	1 cut(s)	331
Kzo9I	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
LguI	GCTCTTC	1 cut(s)	882
LmnI	GCTCC	8 cut(s)	223, 378, 386, 632, 854, 1394, 1778, 1993
Lsp1109I	GCAGC	6 cut(s)	1357, 1411, 1423, 1658, 1714, 1729
LweI	GCATC	2 cut(s)	581, 1063
MaeI	CTAG	2 cut(s)	33, 1508
MaeII	ACGT	1 cut(s)	1410
MaeIII	GTNAC	6 cut(s)	244, 454, 1295, 1621, 1801, 1844
MalI	GATC	5 cut(s)	333, 725, 1070, 1338, 1460
MboI	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
MboII	GAAGA	9 cut(s)	82, 515, 869, 1528, 1676, 1777, 1850, 2153, 2156
MfeI	CAATTG	2 cut(s)	1077, 1145
MflI	RGATCY	1 cut(s)	1336
MhlI	GDGCHC	8 cut(s)	155, 383, 637, 819, 877, 1674, 1998, 2106
MlsI	TGGCCA	1 cut(s)	1116
MluNI	TGGCCA	1 cut(s)	1116
MlyI	GAGTC	2 cut(s)	149, 1459
MmeI	TCCRAC	2 cut(s)	492, 714
Mox20I	TGGCCA	1 cut(s)	1116
Mph1103I	ATGCAT	2 cut(s)	574, 1724
MroXI	GAANNNNTTC	3 cut(s)	396, 1683, 2046
MscI	TGGCCA	1 cut(s)	1116
MseI	TTAA	9 cut(s)	212, 224, 261, 300, 429, 477, 602, 765, 1617
MslI	CAYNNNNRTG	2 cut(s)	341, 405
Msp20I	TGGCCA	1 cut(s)	1116
MspI	CCGG	4 cut(s)	66, 1084, 1249, 2201
MunI	CAATTG	2 cut(s)	1077, 1145
Mva1269I	GAATGC	2 cut(s)	181, 748
MvaI	CCWGG	7 cut(s)	182, 321, 678, 894, 1245, 1383, 1595
MvnI	CGCG	2 cut(s)	390, 1636
MwoI	GCNNNNNNNGC	6 cut(s)	387, 527, 1403, 1433, 1826, 2002
NciI	CCSGG	3 cut(s)	66, 67, 1085
NdeII	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
NlaIII	CATG	9 cut(s)	551, 649, 1121, 1468, 1565, 1577, 1722, 1726, 2009
NlaIV	GGNNCC	7 cut(s)	64, 634, 945, 1174, 1344, 1592, 2135
NmeAIII	GCCGAG	2 cut(s)	719, 1763
NmuCI	GTSAC	3 cut(s)	244, 1801, 1844
NsbI	TGCGCA	1 cut(s)	1042
NsiI	ATGCAT	2 cut(s)	574, 1724
NspI	RCATGY	2 cut(s)	1722, 2009
NspV	TTCGAA	3 cut(s)	194, 501, 1012
PagI	TCATGA	2 cut(s)	547, 645
PaqCI	CACCTGC	1 cut(s)	152
PasI	CCCWGGG	1 cut(s)	181
PceI	AGGCCT	1 cut(s)	1213
PciSI	GCTCTTC	1 cut(s)	882
PctI	GAATGC	2 cut(s)	181, 748
PdmI	GAANNNNTTC	3 cut(s)	396, 1683, 2046
PfeI	GAWTC	9 cut(s)	27, 202, 410, 494, 935, 1565, 1883, 2065, 2121
PfoI	TCCNGGA	3 cut(s)	892, 1381, 1593
PkrI	GCNGC	8 cut(s)	1372, 1426, 1438, 1483, 1505, 1648, 1704, 1744
PleI	GAGTC	2 cut(s)	148, 1458
PpsI	GAGTC	2 cut(s)	148, 1458
PpuMI	RGGWCCY	1 cut(s)	62
PsiI	TTATAA	1 cut(s)	1529
Psp124BI	GAGCTC	1 cut(s)	383
Psp5II	RGGWCCY	1 cut(s)	62
Psp6I	CCWGG	7 cut(s)	180, 319, 676, 892, 1243, 1381, 1593
PspGI	CCWGG	7 cut(s)	180, 319, 676, 892, 1243, 1381, 1593
PspN4I	GGNNCC	7 cut(s)	64, 634, 945, 1174, 1344, 1592, 2135
PspPI	GGNCC	5 cut(s)	62, 611, 674, 887, 998
PspPPI	RGGWCCY	1 cut(s)	62
PsrI	GAACNNNNNNTAC	2 cut(s)	1614, 1646
PstI	CTGCAG	1 cut(s)	1648
PsuI	RGATCY	1 cut(s)	1336
RsaI	GTAC	3 cut(s)	1135, 1194, 2073
RsaNI	GTAC	3 cut(s)	1134, 1193, 2072
RseI	CAYNNNNRTG	2 cut(s)	341, 405
SacI	GAGCTC	1 cut(s)	383
SapI	GCTCTTC	1 cut(s)	882
SaqAI	TTAA	9 cut(s)	212, 224, 261, 300, 429, 477, 602, 765, 1617
SatI	GCNGC	8 cut(s)	1371, 1425, 1437, 1482, 1504, 1647, 1703, 1743
Sau3AI	GATC	5 cut(s)	331, 723, 1068, 1336, 1458
Sau96I	GGNCC	5 cut(s)	62, 611, 674, 887, 998
ScaI	AGTACT	2 cut(s)	1135, 2073
SchI	GAGTC	2 cut(s)	149, 1459
SduI	GDGCHC	8 cut(s)	155, 383, 637, 819, 877, 1674, 1998, 2106
SfaNI	GCATC	2 cut(s)	581, 1063
SfcI	CTRYAG	2 cut(s)	1485, 1644
SfuI	TTCGAA	3 cut(s)	194, 501, 1012
SinI	GGWCC	3 cut(s)	62, 674, 998
SmaI	CCCGGG	1 cut(s)	67
SmiMI	CAYNNNNRTG	2 cut(s)	341, 405
SmlI	CTYRAG	5 cut(s)	154, 522, 1237, 1328, 1821
SmoI	CTYRAG	5 cut(s)	154, 522, 1237, 1328, 1821
SseBI	AGGCCT	1 cut(s)	1213
SsiI	CCGC	5 cut(s)	1481, 1503, 1583, 1634, 1972
SspI	AATATT	2 cut(s)	470, 1056
SspMI	CTAG	2 cut(s)	33, 1508
SstI	GAGCTC	1 cut(s)	383
StuI	AGGCCT	1 cut(s)	1213
StyI	CCWWGG	2 cut(s)	58, 1729
TaaI	ACNGT	9 cut(s)	189, 545, 619, 1038, 1259, 1552, 1910, 1937, 1978
TaiI	ACGT	1 cut(s)	1413
TaqI	TCGA	7 cut(s)	5, 194, 501, 1012, 1071, 2068, 2096
TaqII	GACCGA	1 cut(s)	2172
TatI	WGTACW	3 cut(s)	1133, 1192, 2071
TauI	GCSGC	2 cut(s)	1484, 1506
TfiI	GAWTC	9 cut(s)	27, 202, 410, 494, 935, 1565, 1883, 2065, 2121
Tru1I	TTAA	9 cut(s)	212, 224, 261, 300, 429, 477, 602, 765, 1617
Tru9I	TTAA	9 cut(s)	212, 224, 261, 300, 429, 477, 602, 765, 1617
TscAI	CASTG	8 cut(s)	1043, 1183, 1648, 1656, 1836, 1849, 1942, 1981
TseFI	GTSAC	3 cut(s)	244, 1801, 1844
TseI	GCWGC	6 cut(s)	1370, 1424, 1436, 1646, 1702, 1742
Tsp45I	GTSAC	3 cut(s)	244, 1801, 1844
TspDTI	ATGAA	8 cut(s)	220, 389, 634, 1434, 1481, 1578, 1692, 1875
TspGWI	ACGGA	3 cut(s)	152, 990, 1561
TspMI	CCCGGG	1 cut(s)	65
TspRI	CASTG	8 cut(s)	1043, 1183, 1648, 1656, 1836, 1849, 1942, 1981
VneI	GTGCAC	1 cut(s)	815
VpaK11BI	GGWCC	3 cut(s)	62, 674, 998
XagI	CCTNNNNNAGG	3 cut(s)	429, 444, 897
XapI	RAATTY	4 cut(s)	36, 111, 296, 861
XceI	RCATGY	2 cut(s)	1722, 2009
XmaI	CCCGGG	1 cut(s)	65
XmnI	GAANNNNTTC	3 cut(s)	396, 1683, 2046
XspI	CTAG	2 cut(s)	33, 1508
ZrmI	AGTACT	2 cut(s)	1135, 2073
Zsp2I	ATGCAT	2 cut(s)	574, 1724

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.