Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0002584

Physical Location & Seq

Genomic Coordinates Reverse (-)

65677256 .. 65690393

Gene Structure 13138 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG471400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGATTTTTTCAAGGCTTGGTCGCTCCTTATCTCGATCCTCTCGCTCCAGGAATTTGCTTTCTCGAAATGGGCGATCGGCGGCGGCTGAAGGGCTTTTGGGAGTGCCGGGTTCGGGTTCGTATCTGGGTCGGGTCGATGGGGATTTAGGGTTTATGAGGACCTATATTGCTTCGGCAATAGGAGCGCACAAGACCCATGTTTCTGATTTGAGTTACATTCTAGGGAACCCTAAATTTGTGAGACTGTTTTCCAGTGAAGCCCCTAAGAAAAAGAATTTTGAGAACTTCTATCCCAAGGAAAAGAAAGAAATCCCAAAAGGGAATGATCAGAAATCCGAGTCCAAAGAGGAGTCGAGCACCGATGACCAGGGGAGTTTCCAGGAAACTTTCTTAAAGCAGTTCCAGAATTTAGTCCCTTTATTATTGATCGGGCTATTTTTCTCTTCATTTTCTTTTGGCTCCAGTGAACAGAAACAGATAAGTTTCCAAGAGTTTAAAAACAAACTTCTGGAACCAGGTTTGGTCGATCATATAGTTGTTTCTAATAAATCAGTTGCAAAAGTATTTGTACGTAGCTCACCACGCAGTCAAACAAGTGATGAAGTTGTCGAAGGAACTATTAATGGTACCGCTGCTCGTGGAAAAGGGGGCGAGTATAAGTACTTCTTCAATATTGGAAGTGTTGAAAATTTTGAGGAGAAGTTGGAGGATGCCCAGGAAGCTCTGGGGATAGATTCTCATGATTATGTTCCCGTTACATATGTCTCTGAAATGGTTTGGTATCAAGAATTGATGAGGTTTGCACCAACATTAATCCTTCTGGGAACCCTCTTGTATATGGGGCGGAGAATGCAGGGTGGACTAGGCATTGGTGGTGGTTCTGGTGGCCGGAGTGGTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACAAAAGTAGATAAAAATGCAAAGAATAAGATCTACTTTAAAGATGTTGCCGGTTGCGATGAAGCAAAGCAAGAGATCATGGAATTTGTGCATTTTCTGAAGAACCCAAAAAAGTATGAGGATTTGGGAGCTAAAATTCCCAAAGGTGCTCTATTGGTAGGTCCTCCAGGCACAGGAAAGACCCTTCTAGCAAAAGCAACAGCAGGGGAATCTGGTGTACCTTTCCTATCTATATCTGGATCAGATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAGAAGCAAGGCAATGTGCTCCTAGTATTATATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGGGGGCGTGGGGGCTTCTCAGGGTCCAATGATGAGCGTGAAAGCACTCTAAATCAATTGCTGGTAGAAATGGATGGCTTTGGAACAACTGCTGGAGTAGTTGTGCTTGCTGGAACCAATAGGCCTGATATTTTGGACAAAGCCTTACTAAGGCCTGGTCGATTTGATCGTCAGATTAGCATTGACAAACCTGATATTAAAGGTCGTGATCAGATATTTCAGATATACTTGAAAAAACTCAAACTTGATCAGCAGCCTTCATATTACTCTCAAAGGCTTGCAGCGCTGACTCCAGGATTTGCTGGAGCAGACATTGCCAATGTTTGCAATGAAGGTGCTTTAATTGCTGCCAGGAATGAAAGTGCACTAATTACGATGCAGCATTTTGAGTCAGCTATAGATAGGATAATTGGTGGTCTGGAAAAGAAGAACAGGGTAACTCTTTTCTGTCTCCTTGTGCATTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009719 GO:0009725 GO:0009735 GO:0010033 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0031976 GO:0031984 GO:0034357 GO:0042221 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0055035 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA FtsH_ext Peptidase_M41

Protein Analysis

586

Amino Acids

64.28

Weight (kDa)

9.12

Isoelectric Point (pI)

34.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FtsH_ext	PF06480	138 - 247	8.3e-14	FtsH Extracellular
AAA	PF00004	361 - 493	5.2e-43	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	523 - 561	8.6e-11	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002584)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07510 AT2G29080
fragaria_vesca	FvH4_3g36790 FvH4_3g36790 FvH4_3g36790 FvH4_6g13480 FvH4_6g13480 FvH4_6g13480
malus_domestica	MD03G1088300.v1.1 MD03G1088400.v1.1 MD04G1130900.v1.1 MD11G1097400.v1.1 MD12G1144000.v1.1
prunus_persica	Prupe.6G072600_v2.0.a1 Prupe.6G257400_v2.0.a1 Prupe.6G257400_v2.0.a1
pyrus_communis	pycom03g06980 pycom03g07000 pycom04g11920 pycom11g08210 pycom12g13860
rosa_chinensis	RchiOBHm_Chr3g0466351 RchiOBHm_Chr5g0065851
rosa_laevigata	RLG00000024582 RLG00000035821
rosa_multiflora	Rmu_sc0003480.1_g000012 Rmu_sc0042868.1_g000001
rosa_roxburghii	Rroxscaffold_1G00015310 Rroxscaffold_6G00414550
rosa_rugosa	Rorug03G0081200 Rorug05G0374100 Rorug05G0374200 Rorug05G0374300
rosa_samantha	Rh3BG148900 Rh3DG149600 Rh5BG449200 Rh5CG471400 Rh5DG462800
rosa_wichuraiana	Rw3G012050 Rw5G040600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	626
AccB1I	GGYRCC	1 cut(s)	626
AciI	CCGC	4 cut(s)	80, 83, 630, 844
AclWI	GGATC	2 cut(s)	30, 1177
AcoI	YGGCCR	1 cut(s)	886
AcsI	RAATTY	7 cut(s)	52, 233, 274, 406, 688, 1013, 1065
AcuI	CTGAAG	2 cut(s)	108, 1049
AfaI	GTAC	4 cut(s)	570, 628, 662, 1149
AfeI	AGCGCT	1 cut(s)	1578
AfiI	CCNNNNNNNGG	3 cut(s)	113, 1103, 1443
AgsI	TTSAA	6 cut(s)	12, 670, 686, 910, 1229, 1525
AjnI	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
AluBI	AGCT	4 cut(s)	576, 722, 1061, 1688
AluI	AGCT	4 cut(s)	576, 722, 1061, 1688
Alw21I	GWGCWC	4 cut(s)	359, 1081, 1249, 1660
Alw26I	GTCTC	3 cut(s)	235, 769, 1748
Alw44I	GTGCAC	1 cut(s)	1656
AlwI	GGATC	2 cut(s)	30, 1177
Aor51HI	AGCGCT	1 cut(s)	1578
AoxI	GGCC	3 cut(s)	886, 1415, 1445
ApaLI	GTGCAC	1 cut(s)	1656
ApeKI	GCWGC	5 cut(s)	632, 1546, 1574, 1640, 1672
ApoI	RAATTY	7 cut(s)	52, 233, 274, 406, 688, 1013, 1065
AseI	ATTAAT	2 cut(s)	621, 812
Asp718I	GGTACC	1 cut(s)	626
AspLEI	GCGC	2 cut(s)	187, 1579
AspS9I	GGNCC	4 cut(s)	159, 1091, 1202, 1317
AsuC2I	CCSGG	1 cut(s)	108
AsuHPI	GGTGA	1 cut(s)	570
AvaII	GGWCC	4 cut(s)	159, 1091, 1202, 1317
BaeGI	GKGCMC	1 cut(s)	1660
BanI	GGYRCC	1 cut(s)	626
BarI	GAAGNNNNNNTAC	2 cut(s)	647, 679
BauI	CACGAG	1 cut(s)	636
Bbv12I	GWGCWC	4 cut(s)	359, 1081, 1249, 1660
BbvI	GCAGC	5 cut(s)	619, 1558, 1586, 1627, 1684
BccI	CCATC	2 cut(s)	131, 1361
BciT130I	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BclI	TGATCA	3 cut(s)	325, 1501, 1540
BcnI	CCSGG	1 cut(s)	108
BcoDI	GTCTC	3 cut(s)	235, 769, 1748
BfaI	CTAG	4 cut(s)	221, 863, 1118, 1251
BfmI	CTRYAG	1 cut(s)	1689
BfoI	RGCGCY	1 cut(s)	1580
BglII	AGATCT	1 cut(s)	960
BisI	GCNGC	7 cut(s)	81, 84, 633, 1547, 1575, 1641, 1673
BlsI	GCNGC	7 cut(s)	82, 85, 634, 1548, 1576, 1642, 1674
BmcAI	AGTACT	1 cut(s)	662
Bme18I	GGWCC	4 cut(s)	159, 1091, 1202, 1317
BmgT120I	GGNCC	4 cut(s)	159, 1091, 1202, 1317
BmiI	GGNNCC	7 cut(s)	227, 460, 513, 628, 826, 1318, 1408
BmsI	GCATC	3 cut(s)	700, 1267, 1659
BpmI	CTGGAG	6 cut(s)	31, 445, 1080, 1407, 1569, 1617
BpuMI	CCSGG	1 cut(s)	108
BsaAI	YACGTR	1 cut(s)	572
BsaJI	CCNNGG	3 cut(s)	294, 367, 714
BsaXI	ACNNNNNCTCC	4 cut(s)	883, 913, 1380, 1410
Bsc4I	CCNNNNNNNGG	3 cut(s)	113, 1103, 1443
Bse118I	RCCGGY	1 cut(s)	980
Bse1I	ACTGG	2 cut(s)	252, 462
Bse3DI	GCAATG	3 cut(s)	1247, 1605, 1627
BseBI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BseDI	CCNNGG	3 cut(s)	294, 367, 714
BseGI	GGATG	2 cut(s)	715, 1372
BseLI	CCNNNNNNNGG	3 cut(s)	113, 1103, 1443
BseMI	GCAATG	3 cut(s)	1247, 1605, 1627
BseMII	CTCAG	1 cut(s)	1326
BseNI	ACTGG	2 cut(s)	252, 462
BseRI	GAGGAG	2 cut(s)	362, 710
BseSI	GKGCMC	1 cut(s)	1660
BseXI	GCAGC	5 cut(s)	619, 1558, 1586, 1627, 1684
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	3 cut(s)	888, 1417, 1447
BshNI	GGYRCC	1 cut(s)	626
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	4 cut(s)	359, 1081, 1249, 1660
BsiSI	CCGG	3 cut(s)	107, 889, 981
BslFI	GGGAC	1 cut(s)	398
BslI	CCNNNNNNNGG	3 cut(s)	113, 1103, 1443
BsmAI	GTCTC	3 cut(s)	235, 769, 1748
BsmFI	GGGAC	1 cut(s)	398
BsmI	GAATGC	1 cut(s)	855
BsnI	GGCC	3 cut(s)	888, 1417, 1447
Bsp1286I	GDGCHC	4 cut(s)	359, 1081, 1249, 1660
BspACI	CCGC	4 cut(s)	80, 83, 630, 844
BspANI	GGCC	3 cut(s)	888, 1417, 1447
BspCNI	CTCAG	1 cut(s)	1325
BspHI	TCATGA	1 cut(s)	739
BspLI	GGNNCC	7 cut(s)	227, 460, 513, 628, 826, 1318, 1408
BspPI	GGATC	2 cut(s)	30, 1177
BspT107I	GGYRCC	1 cut(s)	626
BsrDI	GCAATG	3 cut(s)	1247, 1605, 1627
BsrFI	RCCGGY	1 cut(s)	980
BsrI	ACTGG	2 cut(s)	252, 462
BssAI	RCCGGY	1 cut(s)	980
BssECI	CCNNGG	3 cut(s)	294, 367, 714
BssSI	CACGAG	1 cut(s)	636
BssT1I	CCWWGG	1 cut(s)	294
Bst2BI	CACGAG	1 cut(s)	636
Bst2UI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
Bst4CI	ACNGT	1 cut(s)	246
Bst6I	CTCTTC	1 cut(s)	448
BstAPI	GCANNNNNTGC	1 cut(s)	1607
BstBAI	YACGTR	1 cut(s)	572
BstC8I	GCNNGC	2 cut(s)	1401, 1572
BstDEI	CTNAG	3 cut(s)	264, 1312, 1442
BstENI	CCTNNNNNAGG	1 cut(s)	1441
BstF5I	GGATG	2 cut(s)	715, 1372
BstH2I	RGCGCY	1 cut(s)	1580
BstHHI	GCGC	2 cut(s)	187, 1579
BstMAI	GTCTC	3 cut(s)	235, 769, 1748
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	7 cut(s)	182, 582, 719, 850, 1576, 1607, 1637
BstNI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BstSFI	CTRYAG	1 cut(s)	1689
BstSLI	GKGCMC	1 cut(s)	1660
BstSNI	TACGTA	1 cut(s)	572
BstV1I	GCAGC	5 cut(s)	619, 1558, 1586, 1627, 1684
BstX2I	RGATCY	1 cut(s)	960
BstYI	RGATCY	1 cut(s)	960
BsuRI	GGCC	3 cut(s)	888, 1417, 1447
BtgZI	GCGATG	1 cut(s)	1002
BtsCI	GGATG	2 cut(s)	715, 1372
BtsIMutI	CAGTG	2 cut(s)	259, 469
Cac8I	GCNNGC	2 cut(s)	1401, 1572
CciI	TCATGA	1 cut(s)	739
CfoI	GCGC	2 cut(s)	187, 1579
Cfr10I	RCCGGY	1 cut(s)	980
Cfr13I	GGNCC	4 cut(s)	159, 1091, 1202, 1317
CsiI	ACCWGGT	1 cut(s)	514
Csp6I	GTAC	4 cut(s)	569, 627, 661, 1148
CviAII	CATG	5 cut(s)	197, 740, 926, 1009, 1180
CviQI	GTAC	4 cut(s)	569, 627, 661, 1148
DdeI	CTNAG	3 cut(s)	264, 1312, 1442
DraI	TTTAAA	2 cut(s)	496, 970
EaeI	YGGCCR	1 cut(s)	886
Eam1104I	CTCTTC	1 cut(s)	448
EarI	CTCTTC	1 cut(s)	448
EciI	GGCGGA	1 cut(s)	859
Eco105I	TACGTA	1 cut(s)	572
Eco130I	CCWWGG	1 cut(s)	294
Eco147I	AGGCCT	2 cut(s)	1417, 1447
Eco47I	GGWCC	4 cut(s)	159, 1091, 1202, 1317
Eco47III	AGCGCT	1 cut(s)	1578
Eco57I	CTGAAG	2 cut(s)	108, 1049
EcoNI	CCTNNNNNAGG	1 cut(s)	1441
EcoO109I	RGGNCCY	2 cut(s)	159, 1091
EcoRII	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
EcoT14I	CCWWGG	1 cut(s)	294
ErhI	CCWWGG	1 cut(s)	294
FaeI	CATG	5 cut(s)	200, 743, 929, 1012, 1183
FalI	AAGNNNNNCTT	4 cut(s)	650, 682, 950, 982
FaqI	GGGAC	1 cut(s)	398
FatI	CATG	5 cut(s)	196, 739, 925, 1008, 1179
FauNDI	CATATG	1 cut(s)	760
FbaI	TGATCA	3 cut(s)	325, 1501, 1540
Fnu4HI	GCNGC	7 cut(s)	81, 84, 633, 1547, 1575, 1641, 1673
FokI	GGATG	2 cut(s)	722, 1379
Fsp4HI	GCNGC	7 cut(s)	81, 84, 633, 1547, 1575, 1641, 1673
FspBI	CTAG	4 cut(s)	221, 863, 1118, 1251
GlaI	GCGC	2 cut(s)	186, 1578
GluI	GCNGC	7 cut(s)	81, 84, 633, 1547, 1575, 1641, 1673
GsuI	CTGGAG	6 cut(s)	31, 445, 1080, 1407, 1569, 1617
HaeII	RGCGCY	1 cut(s)	1580
HaeIII	GGCC	3 cut(s)	888, 1417, 1447
HapII	CCGG	3 cut(s)	107, 889, 981
HhaI	GCGC	2 cut(s)	187, 1579
Hin1II	CATG	5 cut(s)	200, 743, 929, 1012, 1183
Hin6I	GCGC	2 cut(s)	185, 1577
HinP1I	GCGC	2 cut(s)	185, 1577
HinfI	GANTC	6 cut(s)	338, 350, 734, 1139, 1582, 1682
HpaII	CCGG	3 cut(s)	107, 889, 981
HphI	GGTGA	1 cut(s)	570
Hpy166II	GTNNAC	4 cut(s)	467, 860, 1148, 1658
Hpy188I	TCNGA	9 cut(s)	205, 330, 337, 769, 1029, 1174, 1467, 1506, 1515
Hpy8I	GTNNAC	4 cut(s)	467, 860, 1148, 1658
HpyAV	CCTTC	7 cut(s)	83, 605, 827, 1124, 1215, 1560, 1619
HpyCH4III	ACNGT	1 cut(s)	246
HpyCH4IV	ACGT	1 cut(s)	571
HpyF10VI	GCNNNNNNNGC	7 cut(s)	182, 582, 719, 850, 1576, 1607, 1637
HpyF3I	CTNAG	3 cut(s)	264, 1312, 1442
HpySE526I	ACGT	1 cut(s)	571
Hsp92II	CATG	5 cut(s)	200, 743, 929, 1012, 1183
HspAI	GCGC	2 cut(s)	185, 1577
KpnI	GGTACC	1 cut(s)	630
Ksp22I	TGATCA	3 cut(s)	325, 1501, 1540
LmnI	GCTCC	7 cut(s)	29, 50, 182, 464, 1058, 1252, 1598
Lsp1109I	GCAGC	5 cut(s)	619, 1558, 1586, 1627, 1684
LweI	GCATC	3 cut(s)	700, 1267, 1659
MabI	ACCWGGT	1 cut(s)	514
MaeI	CTAG	4 cut(s)	221, 863, 1118, 1251
MaeII	ACGT	1 cut(s)	571
MaeIII	GTNAC	4 cut(s)	212, 754, 928, 1729
MboII	GAAGA	4 cut(s)	435, 658, 1042, 1732
MfeI	CAATTG	2 cut(s)	1281, 1349
MflI	RGATCY	1 cut(s)	960
MhlI	GDGCHC	4 cut(s)	359, 1081, 1249, 1660
MlyI	GAGTC	4 cut(s)	347, 359, 1576, 1691
MmeI	TCCRAC	2 cut(s)	684, 1180
MnlI	CCTC	9 cut(s)	49, 150, 340, 688, 700, 789, 839, 1042, 1104
MseI	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 1759
MslI	CAYNNNNRTG	2 cut(s)	744, 1184
MspA1I	CMGCKG	1 cut(s)	632
MspI	CCGG	3 cut(s)	107, 889, 981
MunI	CAATTG	2 cut(s)	1281, 1349
Mva1269I	GAATGC	1 cut(s)	855
MvaI	CCWGG	9 cut(s)	49, 368, 380, 516, 716, 1098, 1449, 1587, 1645
MwoI	GCNNNNNNNGC	7 cut(s)	182, 582, 719, 850, 1576, 1607, 1637
NciI	CCSGG	1 cut(s)	108
NdeI	CATATG	1 cut(s)	760
NlaIII	CATG	5 cut(s)	200, 743, 929, 1012, 1183
NlaIV	GGNNCC	7 cut(s)	227, 460, 513, 628, 826, 1318, 1408
PagI	TCATGA	1 cut(s)	739
PceI	AGGCCT	2 cut(s)	1417, 1447
PcsI	WCGNNNNNNNCGW	2 cut(s)	70, 1459
PctI	GAATGC	1 cut(s)	855
PfeI	GAWTC	2 cut(s)	734, 1139
PfoI	TCCNGGA	3 cut(s)	47, 378, 1585
PkrI	GCNGC	7 cut(s)	82, 85, 634, 1548, 1576, 1642, 1674
Ple19I	CGATCG	1 cut(s)	77
PleI	GAGTC	4 cut(s)	346, 358, 1576, 1690
PpsI	GAGTC	4 cut(s)	346, 358, 1576, 1690
Ppu21I	YACGTR	1 cut(s)	572
PpuMI	RGGWCCY	2 cut(s)	159, 1091
PshBI	ATTAAT	2 cut(s)	621, 812
Psp5II	RGGWCCY	2 cut(s)	159, 1091
Psp6I	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
PspGI	CCWGG	9 cut(s)	47, 366, 378, 514, 714, 1096, 1447, 1585, 1643
PspN4I	GGNNCC	7 cut(s)	227, 460, 513, 628, 826, 1318, 1408
PspPI	GGNCC	4 cut(s)	159, 1091, 1202, 1317
PspPPI	RGGWCCY	2 cut(s)	159, 1091
PsuI	RGATCY	1 cut(s)	960
PvuI	CGATCG	1 cut(s)	77
RsaI	GTAC	4 cut(s)	570, 628, 662, 1149
RsaNI	GTAC	4 cut(s)	569, 627, 661, 1148
RseI	CAYNNNNRTG	2 cut(s)	744, 1184
SaqAI	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 1759
SatI	GCNGC	7 cut(s)	81, 84, 633, 1547, 1575, 1641, 1673
Sau96I	GGNCC	4 cut(s)	159, 1091, 1202, 1317
ScaI	AGTACT	1 cut(s)	662
SchI	GAGTC	4 cut(s)	347, 359, 1576, 1691
SduI	GDGCHC	4 cut(s)	359, 1081, 1249, 1660
SexAI	ACCWGGT	1 cut(s)	514
SfaNI	GCATC	3 cut(s)	700, 1267, 1659
SfcI	CTRYAG	1 cut(s)	1689
SinI	GGWCC	4 cut(s)	159, 1091, 1202, 1317
SmiMI	CAYNNNNRTG	2 cut(s)	744, 1184
SnaBI	TACGTA	1 cut(s)	572
SseBI	AGGCCT	2 cut(s)	1417, 1447
SsiI	CCGC	4 cut(s)	80, 83, 630, 844
SspI	AATATT	2 cut(s)	673, 906
SspMI	CTAG	4 cut(s)	221, 863, 1118, 1251
StuI	AGGCCT	2 cut(s)	1417, 1447
StyI	CCWWGG	1 cut(s)	294
TaaI	ACNGT	1 cut(s)	246
TaiI	ACGT	1 cut(s)	574
TaqI	TCGA	8 cut(s)	34, 64, 135, 353, 525, 609, 1288, 1453
TatI	WGTACW	1 cut(s)	660
TauI	GCSGC	2 cut(s)	83, 86
TfiI	GAWTC	2 cut(s)	734, 1139
Tru1I	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 1759
Tru9I	TTAA	8 cut(s)	392, 495, 621, 812, 969, 1491, 1634, 1759
TscAI	CASTG	2 cut(s)	259, 469
TseI	GCWGC	5 cut(s)	632, 1546, 1574, 1640, 1672
TspDTI	ATGAA	7 cut(s)	435, 615, 1005, 1168, 1542, 1638, 1665
TspRI	CASTG	2 cut(s)	259, 469
VneI	GTGCAC	1 cut(s)	1656
VpaK11BI	GGWCC	4 cut(s)	159, 1091, 1202, 1317
VspI	ATTAAT	2 cut(s)	621, 812
XagI	CCTNNNNNAGG	1 cut(s)	1441
XapI	RAATTY	7 cut(s)	52, 233, 274, 406, 688, 1013, 1065
XspI	CTAG	4 cut(s)	221, 863, 1118, 1251
ZrmI	AGTACT	1 cut(s)	662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.