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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g12160 FvH4_4g12170 |
| malus_domestica | MD08G1075700.v1.1 MD08G1075800.v1.1 MD08G1076000.v1.1 MD15G1063200.v1.1 |
| prunus_persica | Prupe.1G417200_v2.0.a1 |
| pyrus_communis | pycom08g06260 pycom15g05980 |
| rosa_chinensis | RchiOBHm_Chr4g0412151 RchiOBHm_Chr6g0275121 |
| rosa_laevigata | RLG00000008313 RLG00000008314 RLG00000013495 RLG00000024070 |
| rosa_multiflora | Rmu_sc0003510.1_g000026 Rmu_sc0004221.1_g000010 Rmu_sc0006012.1_g000009 Rmu_sc0011581.1_g000007 Rmu_ssc0000041.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00356420 Rroxscaffold_6G00408830 |
| rosa_rugosa | Rorug03G0126700 Rorug04G0105600 Rorug06G0088600.1 |
| rosa_samantha | Rh4AG171800 Rh4BG171000 Rh4BG171100 Rh4CG182600 Rh4DG166200 Rh6AG202600 Rh6DG198100 |
| rosa_wichuraiana | Rw4G014340 Rw6G017590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2187 |
| AarI | CACCTGC | 1 cut(s) | 1038 |
| Acc36I | ACCTGC | 2 cut(s) | 1038, 1687 |
| AccB1I | GGYRCC | 2 cut(s) | 866, 1777 |
| AccI | GTMKAC | 2 cut(s) | 262, 913 |
| AciI | CCGC | 1 cut(s) | 573 |
| AclWI | GGATC | 7 cut(s) | 88, 279, 605, 618, 1001, 1214, 1227 |
| AcsI | RAATTY | 4 cut(s) | 839, 1173, 1839, 2210 |
| AcuI | CTGAAG | 4 cut(s) | 68, 1049, 1482, 2150 |
| AfaI | GTAC | 8 cut(s) | 454, 818, 826, 1378, 1677, 2043, 2054, 2107 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 77, 287, 376, 1016 |
| AflIII | ACRYGT | 3 cut(s) | 813, 1201, 1639 |
| AjiI | CACGTC | 1 cut(s) | 814 |
| AjnI | CCWGG | 1 cut(s) | 1109 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2345, 2377 |
| Alw21I | GWGCWC | 2 cut(s) | 1889, 2426 |
| Alw26I | GTCTC | 5 cut(s) | 282, 1192, 1335, 1643, 2008 |
| Alw44I | GTGCAC | 2 cut(s) | 1885, 2422 |
| AlwI | GGATC | 7 cut(s) | 88, 279, 605, 618, 1001, 1214, 1227 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 694 |
| AoxI | GGCC | 3 cut(s) | 367, 1560, 1971 |
| ApaLI | GTGCAC | 2 cut(s) | 1885, 2422 |
| ApeKI | GCWGC | 5 cut(s) | 94, 1543, 1599, 2024, 2273 |
| ApoI | RAATTY | 4 cut(s) | 839, 1173, 1839, 2210 |
| AseI | ATTAAT | 1 cut(s) | 242 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 417, 1119 |
| AspS9I | GGNCC | 4 cut(s) | 232, 1560, 1985, 2450 |
| AsuHPI | GGTGA | 3 cut(s) | 868, 1903, 2213 |
| AvaII | GGWCC | 3 cut(s) | 232, 1985, 2450 |
| AxyI | CCTNAGG | 1 cut(s) | 1224 |
| BaeGI | GKGCMC | 2 cut(s) | 1889, 2426 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1659, 1692 |
| BamHI | GGATCC | 2 cut(s) | 610, 1219 |
| BanI | GGYRCC | 2 cut(s) | 866, 1777 |
| BanII | GRGCYC | 1 cut(s) | 335 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 921, 953 |
| BbsI | GAAGAC | 3 cut(s) | 56, 1064, 1834 |
| Bbv12I | GWGCWC | 2 cut(s) | 1889, 2426 |
| BbvI | GCAGC | 5 cut(s) | 81, 1555, 1611, 2011, 2260 |
| BccI | CCATC | 5 cut(s) | 318, 378, 878, 944, 1531 |
| BceAI | ACGGC | 1 cut(s) | 1395 |
| BciT130I | CCWGG | 1 cut(s) | 1111 |
| BclI | TGATCA | 1 cut(s) | 351 |
| BcoDI | GTCTC | 5 cut(s) | 282, 1192, 1335, 1643, 2008 |
| BfaI | CTAG | 5 cut(s) | 392, 603, 720, 968, 2207 |
| BfmI | CTRYAG | 1 cut(s) | 686 |
| BfuAI | ACCTGC | 2 cut(s) | 1038, 1687 |
| BglII | AGATCT | 2 cut(s) | 1166, 1330 |
| BisI | GCNGC | 6 cut(s) | 95, 573, 1544, 1600, 2025, 2274 |
| BlpI | GCTNAGC | 1 cut(s) | 933 |
| BlsI | GCNGC | 6 cut(s) | 96, 574, 1545, 1601, 2026, 2275 |
| BmcAI | AGTACT | 1 cut(s) | 454 |
| Bme1390I | CCNGG | 1 cut(s) | 1111 |
| Bme18I | GGWCC | 3 cut(s) | 232, 1985, 2450 |
| BmgBI | CACGTC | 1 cut(s) | 814 |
| BmgT120I | GGNCC | 4 cut(s) | 232, 1560, 1985, 2450 |
| BmiI | GGNNCC | 5 cut(s) | 612, 868, 1221, 1779, 2452 |
| BmrFI | CCNGG | 1 cut(s) | 1111 |
| BmrI | ACTGGG | 1 cut(s) | 1481 |
| BmsI | GCATC | 6 cut(s) | 145, 934, 1126, 1261, 1883, 2389 |
| BmuI | ACTGGG | 1 cut(s) | 1481 |
| BpiI | GAAGAC | 3 cut(s) | 56, 1064, 1834 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1989 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 933 |
| BpuEI | CTTGAG | 1 cut(s) | 2039 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2403 |
| BsaJI | CCNNGG | 4 cut(s) | 75, 374, 1110, 1504 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 525, 555 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 77, 287, 376, 1016 |
| Bse1I | ACTGG | 7 cut(s) | 292, 556, 832, 1192, 1315, 1487, 1634 |
| Bse21I | CCTNAGG | 1 cut(s) | 1224 |
| Bse3DI | GCAATG | 2 cut(s) | 499, 1728 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2403 |
| BseBI | CCWGG | 1 cut(s) | 1111 |
| BseDI | CCNNGG | 4 cut(s) | 75, 374, 1110, 1504 |
| BseGI | GGATG | 5 cut(s) | 370, 853, 1106, 1141, 1234 |
| BseJI | GATNNNNATC | 1 cut(s) | 2403 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 77, 287, 376, 1016 |
| BseMI | GCAATG | 2 cut(s) | 499, 1728 |
| BseMII | CTCAG | 6 cut(s) | 93, 463, 924, 1238, 1364, 1980 |
| BseNI | ACTGG | 7 cut(s) | 292, 556, 832, 1192, 1315, 1487, 1634 |
| BseRI | GAGGAG | 1 cut(s) | 1798 |
| BseSI | GKGCMC | 2 cut(s) | 1889, 2426 |
| BseXI | GCAGC | 5 cut(s) | 81, 1555, 1611, 2011, 2260 |
| BsgI | GTGCAG | 1 cut(s) | 2259 |
| BshFI | GGCC | 3 cut(s) | 369, 1562, 1973 |
| BshNI | GGYRCC | 2 cut(s) | 866, 1777 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1889, 2426 |
| BslFI | GGGAC | 5 cut(s) | 449, 786, 976, 1565, 2436 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 77, 287, 376, 1016 |
| BsmAI | GTCTC | 5 cut(s) | 282, 1192, 1335, 1643, 2008 |
| BsmFI | GGGAC | 5 cut(s) | 449, 786, 976, 1565, 2436 |
| BsmI | GAATGC | 4 cut(s) | 529, 1119, 1121, 1724 |
| BsnI | GGCC | 3 cut(s) | 369, 1562, 1973 |
| Bsp1286I | GDGCHC | 3 cut(s) | 335, 1889, 2426 |
| Bsp1407I | TGTACA | 1 cut(s) | 2052 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 933 |
| BspACI | CCGC | 1 cut(s) | 573 |
| BspANI | GGCC | 3 cut(s) | 369, 1562, 1973 |
| BspCNI | CTCAG | 6 cut(s) | 94, 462, 925, 1237, 1363, 1981 |
| BspHI | TCATGA | 1 cut(s) | 1417 |
| BspLI | GGNNCC | 5 cut(s) | 612, 868, 1221, 1779, 2452 |
| BspMAI | CTGCAG | 1 cut(s) | 690 |
| BspMI | ACCTGC | 2 cut(s) | 1038, 1687 |
| BspPI | GGATC | 7 cut(s) | 88, 279, 605, 618, 1001, 1214, 1227 |
| BspT107I | GGYRCC | 2 cut(s) | 866, 1777 |
| BsrDI | GCAATG | 2 cut(s) | 499, 1728 |
| BsrGI | TGTACA | 1 cut(s) | 2052 |
| BsrI | ACTGG | 7 cut(s) | 292, 556, 832, 1192, 1315, 1487, 1634 |
| BssECI | CCNNGG | 4 cut(s) | 75, 374, 1110, 1504 |
| BssT1I | CCWWGG | 3 cut(s) | 75, 374, 1504 |
| Bst2UI | CCWGG | 1 cut(s) | 1111 |
| Bst4CI | ACNGT | 8 cut(s) | 122, 633, 920, 1070, 1472, 1588, 1891, 2050 |
| Bst6I | CTCTTC | 5 cut(s) | 462, 1245, 1641, 1816, 2373 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1730 |
| BstAUI | TGTACA | 1 cut(s) | 2052 |
| BstDEI | CTNAG | 6 cut(s) | 102, 449, 933, 1224, 1350, 1989 |
| BstF5I | GGATG | 5 cut(s) | 370, 853, 1106, 1141, 1234 |
| BstMAI | GTCTC | 5 cut(s) | 282, 1192, 1335, 1643, 2008 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 52, 890, 1730, 1979 |
| BstNI | CCWGG | 1 cut(s) | 1111 |
| BstNSI | RCATGY | 2 cut(s) | 230, 1205 |
| BstSCI | CCNGG | 1 cut(s) | 1109 |
| BstSFI | CTRYAG | 1 cut(s) | 686 |
| BstSLI | GKGCMC | 2 cut(s) | 1889, 2426 |
| BstV1I | GCAGC | 5 cut(s) | 81, 1555, 1611, 2011, 2260 |
| BstV2I | GAAGAC | 3 cut(s) | 56, 1064, 1834 |
| BstX2I | RGATCY | 6 cut(s) | 80, 271, 610, 1166, 1219, 1330 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 625 |
| BstYI | RGATCY | 6 cut(s) | 80, 271, 610, 1166, 1219, 1330 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1224 |
| BsuRI | GGCC | 3 cut(s) | 369, 1562, 1973 |
| BtrI | CACGTC | 1 cut(s) | 814 |
| BtsCI | GGATG | 5 cut(s) | 370, 853, 1106, 1141, 1234 |
| BtsI | GCAGTG | 1 cut(s) | 695 |
| BtsIMutI | CAGTG | 8 cut(s) | 549, 629, 695, 873, 969, 983, 1322, 2055 |
| BveI | ACCTGC | 2 cut(s) | 1038, 1687 |
| CaiI | CAGNNNCTG | 1 cut(s) | 694 |
| CciI | TCATGA | 1 cut(s) | 1417 |
| Cfr13I | GGNCC | 4 cut(s) | 232, 1560, 1985, 2450 |
| CseI | GACGC | 1 cut(s) | 61 |
| Csp6I | GTAC | 8 cut(s) | 453, 817, 825, 1377, 1676, 2042, 2053, 2106 |
| CviAII | CATG | 7 cut(s) | 227, 664, 725, 1202, 1418, 2056, 2097 |
| CviQI | GTAC | 8 cut(s) | 453, 817, 825, 1377, 1676, 2042, 2053, 2106 |
| DdeI | CTNAG | 6 cut(s) | 102, 449, 933, 1224, 1350, 1989 |
| Eam1104I | CTCTTC | 5 cut(s) | 462, 1245, 1641, 1816, 2373 |
| EarI | CTCTTC | 5 cut(s) | 462, 1245, 1641, 1816, 2373 |
| Eco130I | CCWWGG | 3 cut(s) | 75, 374, 1504 |
| Eco24I | GRGCYC | 1 cut(s) | 335 |
| Eco47I | GGWCC | 3 cut(s) | 232, 1985, 2450 |
| Eco57I | CTGAAG | 4 cut(s) | 68, 1049, 1482, 2150 |
| Eco81I | CCTNAGG | 1 cut(s) | 1224 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2450 |
| EcoRI | GAATTC | 1 cut(s) | 2210 |
| EcoRII | CCWGG | 1 cut(s) | 1109 |
| EcoT14I | CCWWGG | 3 cut(s) | 75, 374, 1504 |
| EcoT22I | ATGCAT | 3 cut(s) | 529, 1121, 2404 |
| EcoT38I | GRGCYC | 1 cut(s) | 335 |
| ErhI | CCWWGG | 3 cut(s) | 75, 374, 1504 |
| FaeI | CATG | 7 cut(s) | 230, 667, 728, 1205, 1421, 2059, 2100 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 250, 282, 1523, 1555, 2001, 2033 |
| FaqI | GGGAC | 5 cut(s) | 449, 786, 976, 1565, 2436 |
| FatI | CATG | 7 cut(s) | 226, 663, 724, 1201, 1417, 2055, 2096 |
| FauNDI | CATATG | 1 cut(s) | 217 |
| FbaI | TGATCA | 1 cut(s) | 351 |
| FblI | GTMKAC | 2 cut(s) | 262, 913 |
| Fnu4HI | GCNGC | 6 cut(s) | 95, 573, 1544, 1600, 2025, 2274 |
| FokI | GGATG | 5 cut(s) | 357, 860, 1093, 1148, 1241 |
| FriOI | GRGCYC | 1 cut(s) | 335 |
| Fsp4HI | GCNGC | 6 cut(s) | 95, 573, 1544, 1600, 2025, 2274 |
| FspBI | CTAG | 5 cut(s) | 392, 603, 720, 968, 2207 |
| GluI | GCNGC | 6 cut(s) | 95, 573, 1544, 1600, 2025, 2274 |
| HaeIII | GGCC | 3 cut(s) | 369, 1562, 1973 |
| HgaI | GACGC | 1 cut(s) | 61 |
| Hin1II | CATG | 7 cut(s) | 230, 667, 728, 1205, 1421, 2059, 2100 |
| HincII | GTYRAC | 1 cut(s) | 1624 |
| HindII | GTYRAC | 1 cut(s) | 1624 |
| HindIII | AAGCTT | 1 cut(s) | 1765 |
| HphI | GGTGA | 3 cut(s) | 868, 1903, 2213 |
| Hpy166II | GTNNAC | 8 cut(s) | 263, 817, 914, 1624, 1887, 2042, 2053, 2424 |
| Hpy8I | GTNNAC | 8 cut(s) | 263, 817, 914, 1624, 1887, 2042, 2053, 2424 |
| HpyAV | CCTTC | 6 cut(s) | 276, 417, 1207, 1888, 2143, 2237 |
| HpyCH4III | ACNGT | 8 cut(s) | 122, 633, 920, 1070, 1472, 1588, 1891, 2050 |
| HpyCH4IV | ACGT | 3 cut(s) | 637, 813, 1641 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 52, 890, 1730, 1979 |
| HpyF3I | CTNAG | 6 cut(s) | 102, 449, 933, 1224, 1350, 1989 |
| HpySE526I | ACGT | 3 cut(s) | 637, 813, 1641 |
| Hsp92II | CATG | 7 cut(s) | 230, 667, 728, 1205, 1421, 2059, 2100 |
| Ksp22I | TGATCA | 1 cut(s) | 351 |
| LmnI | GCTCC | 2 cut(s) | 890, 1144 |
| Lsp1109I | GCAGC | 5 cut(s) | 81, 1555, 1611, 2011, 2260 |
| LweI | GCATC | 6 cut(s) | 145, 934, 1126, 1261, 1883, 2389 |
| MaeI | CTAG | 5 cut(s) | 392, 603, 720, 968, 2207 |
| MaeII | ACGT | 3 cut(s) | 637, 813, 1641 |
| MfeI | CAATTG | 3 cut(s) | 776, 1555, 2070 |
| MflI | RGATCY | 6 cut(s) | 80, 271, 610, 1166, 1219, 1330 |
| MhlI | GDGCHC | 3 cut(s) | 335, 1889, 2426 |
| MlyI | GAGTC | 3 cut(s) | 730, 1330, 1645 |
| MmeI | TCCRAC | 1 cut(s) | 1113 |
| Mph1103I | ATGCAT | 3 cut(s) | 529, 1121, 2404 |
| MroXI | GAANNNNTTC | 2 cut(s) | 417, 1119 |
| MseI | TTAA | 9 cut(s) | 197, 242, 312, 363, 713, 1074, 1667, 1881, 2285 |
| MslI | CAYNNNNRTG | 2 cut(s) | 962, 1206 |
| MspR9I | CCNGG | 1 cut(s) | 1111 |
| MunI | CAATTG | 3 cut(s) | 776, 1555, 2070 |
| Mva1269I | GAATGC | 4 cut(s) | 529, 1119, 1121, 1724 |
| MvaI | CCWGG | 1 cut(s) | 1111 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 52, 890, 1730, 1979 |
| NdeI | CATATG | 1 cut(s) | 217 |
| NlaIII | CATG | 7 cut(s) | 230, 667, 728, 1205, 1421, 2059, 2100 |
| NlaIV | GGNNCC | 5 cut(s) | 612, 868, 1221, 1779, 2452 |
| NmuCI | GTSAC | 3 cut(s) | 211, 981, 1582 |
| NsiI | ATGCAT | 3 cut(s) | 529, 1121, 2404 |
| NspI | RCATGY | 2 cut(s) | 230, 1205 |
| PagI | TCATGA | 1 cut(s) | 1417 |
| PaqCI | CACCTGC | 1 cut(s) | 1038 |
| PciI | ACATGT | 1 cut(s) | 1201 |
| PctI | GAATGC | 4 cut(s) | 529, 1119, 1121, 1724 |
| PdmI | GAANNNNTTC | 2 cut(s) | 417, 1119 |
| PfeI | GAWTC | 8 cut(s) | 655, 729, 746, 1103, 1360, 1633, 1847, 2153 |
| PkrI | GCNGC | 6 cut(s) | 96, 574, 1545, 1601, 2026, 2275 |
| PleI | GAGTC | 3 cut(s) | 730, 1329, 1645 |
| PpsI | GAGTC | 3 cut(s) | 730, 1329, 1645 |
| PpuMI | RGGWCCY | 1 cut(s) | 2450 |
| PscI | ACATGT | 1 cut(s) | 1201 |
| PshBI | ATTAAT | 1 cut(s) | 242 |
| PsiI | TTATAA | 1 cut(s) | 2187 |
| Psp5II | RGGWCCY | 1 cut(s) | 2450 |
| Psp6I | CCWGG | 1 cut(s) | 1109 |
| PspGI | CCWGG | 1 cut(s) | 1109 |
| PspN4I | GGNNCC | 5 cut(s) | 612, 868, 1221, 1779, 2452 |
| PspPI | GGNCC | 4 cut(s) | 232, 1560, 1985, 2450 |
| PspPPI | RGGWCCY | 1 cut(s) | 2450 |
| PstI | CTGCAG | 1 cut(s) | 690 |
| PstNI | CAGNNNCTG | 1 cut(s) | 694 |
| PsuI | RGATCY | 6 cut(s) | 80, 271, 610, 1166, 1219, 1330 |
| RsaI | GTAC | 8 cut(s) | 454, 818, 826, 1378, 1677, 2043, 2054, 2107 |
| RsaNI | GTAC | 8 cut(s) | 453, 817, 825, 1377, 1676, 2042, 2053, 2106 |
| RseI | CAYNNNNRTG | 2 cut(s) | 962, 1206 |
| SaqAI | TTAA | 9 cut(s) | 197, 242, 312, 363, 713, 1074, 1667, 1881, 2285 |
| SatI | GCNGC | 6 cut(s) | 95, 573, 1544, 1600, 2025, 2274 |
| Sau96I | GGNCC | 4 cut(s) | 232, 1560, 1985, 2450 |
| ScaI | AGTACT | 1 cut(s) | 454 |
| SchI | GAGTC | 3 cut(s) | 730, 1330, 1645 |
| ScrFI | CCNGG | 1 cut(s) | 1111 |
| SduI | GDGCHC | 3 cut(s) | 335, 1889, 2426 |
| SfaNI | GCATC | 6 cut(s) | 145, 934, 1126, 1261, 1883, 2389 |
| SfcI | CTRYAG | 1 cut(s) | 686 |
| SinI | GGWCC | 3 cut(s) | 232, 1985, 2450 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 962, 1206 |
| SmlI | CTYRAG | 1 cut(s) | 2018 |
| SmoI | CTYRAG | 1 cut(s) | 2018 |
| SsiI | CCGC | 1 cut(s) | 573 |
| SspI | AATATT | 1 cut(s) | 1036 |
| SspMI | CTAG | 5 cut(s) | 392, 603, 720, 968, 2207 |
| StyD4I | CCNGG | 1 cut(s) | 1109 |
| StyI | CCWWGG | 3 cut(s) | 75, 374, 1504 |
| TaaI | ACNGT | 8 cut(s) | 122, 633, 920, 1070, 1472, 1588, 1891, 2050 |
| TaiI | ACGT | 3 cut(s) | 640, 816, 1644 |
| TaqI | TCGA | 2 cut(s) | 58, 2416 |
| TatI | WGTACW | 5 cut(s) | 452, 816, 2041, 2052, 2105 |
| TauI | GCSGC | 1 cut(s) | 575 |
| TfiI | GAWTC | 8 cut(s) | 655, 729, 746, 1103, 1360, 1633, 1847, 2153 |
| Tru1I | TTAA | 9 cut(s) | 197, 242, 312, 363, 713, 1074, 1667, 1881, 2285 |
| Tru9I | TTAA | 9 cut(s) | 197, 242, 312, 363, 713, 1074, 1667, 1881, 2285 |
| TscAI | CASTG | 8 cut(s) | 556, 636, 695, 880, 969, 990, 1322, 2055 |
| TseFI | GTSAC | 3 cut(s) | 211, 981, 1582 |
| TseI | GCWGC | 5 cut(s) | 94, 1543, 1599, 2024, 2273 |
| Tsp45I | GTSAC | 3 cut(s) | 211, 981, 1582 |
| TspRI | CASTG | 8 cut(s) | 556, 636, 695, 880, 969, 990, 1322, 2055 |
| VneI | GTGCAC | 2 cut(s) | 1885, 2422 |
| VpaK11BI | GGWCC | 3 cut(s) | 232, 1985, 2450 |
| VspI | ATTAAT | 1 cut(s) | 242 |
| XapI | RAATTY | 4 cut(s) | 839, 1173, 1839, 2210 |
| XbaI | TCTAGA | 1 cut(s) | 2206 |
| XceI | RCATGY | 2 cut(s) | 230, 1205 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1966 |
| XmiI | GTMKAC | 2 cut(s) | 262, 913 |
| XmnI | GAANNNNTTC | 2 cut(s) | 417, 1119 |
| XspI | CTAG | 5 cut(s) | 392, 603, 720, 968, 2207 |
| ZrmI | AGTACT | 1 cut(s) | 454 |
| Zsp2I | ATGCAT | 3 cut(s) | 529, 1121, 2404 |