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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g12160 FvH4_4g12170 |
| malus_domestica | MD08G1075700.v1.1 MD08G1075800.v1.1 MD08G1076000.v1.1 MD15G1063200.v1.1 |
| prunus_persica | Prupe.1G417200_v2.0.a1 |
| pyrus_communis | pycom08g06260 pycom15g05980 |
| rosa_chinensis | RchiOBHm_Chr4g0412151 RchiOBHm_Chr6g0275121 |
| rosa_laevigata | RLG00000008313 RLG00000008314 RLG00000013495 RLG00000024070 |
| rosa_multiflora | Rmu_sc0003510.1_g000026 Rmu_sc0004221.1_g000010 Rmu_sc0006012.1_g000009 Rmu_sc0011581.1_g000007 Rmu_ssc0000041.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00356420 Rroxscaffold_6G00408830 |
| rosa_rugosa | Rorug03G0126700 Rorug04G0105600 Rorug06G0088600.1 |
| rosa_samantha | Rh4AG171800 Rh4BG171000 Rh4BG171100 Rh4CG182600 Rh4DG166200 Rh6AG202600 Rh6DG198100 |
| rosa_wichuraiana | Rw4G014340 Rw6G017590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 2256, 3609 |
| AarI | CACCTGC | 1 cut(s) | 3573 |
| AatII | GACGTC | 1 cut(s) | 364 |
| Acc16I | TGCGCA | 1 cut(s) | 4648 |
| Acc36I | ACCTGC | 3 cut(s) | 988, 3573, 5027 |
| AccB1I | GGYRCC | 2 cut(s) | 3401, 4318 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2776 |
| AccBSI | CCGCTC | 1 cut(s) | 2270 |
| AccI | GTMKAC | 3 cut(s) | 1338, 1421, 3448 |
| AccII | CGCG | 2 cut(s) | 898, 900 |
| AciI | CCGC | 6 cut(s) | 520, 1160, 2270, 2410, 2759, 4815 |
| AcoI | YGGCCR | 1 cut(s) | 334 |
| AcsI | RAATTY | 8 cut(s) | 936, 1130, 2018, 2185, 2354, 2396, 4380, 4757 |
| AcuI | CTGAAG | 5 cut(s) | 201, 2603, 2898, 3584, 4697 |
| AcyI | GRCGYC | 1 cut(s) | 361 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 351, 1913, 2612, 2776, 2911, 3551, 4233 |
| AflII | CTTAAG | 1 cut(s) | 1415 |
| AflIII | ACRYGT | 2 cut(s) | 1108, 3348 |
| AjiI | CACGTC | 2 cut(s) | 1109, 3349 |
| AjnI | CCWGG | 4 cut(s) | 302, 718, 1500, 3644 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1193, 1225 |
| Alw21I | GWGCWC | 6 cut(s) | 168, 262, 470, 2769, 3430, 4430 |
| Alw44I | GTGCAC | 1 cut(s) | 4426 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 3229 |
| Ama87I | CYCGRG | 1 cut(s) | 2131 |
| AoxI | GGCC | 6 cut(s) | 334, 1443, 1498, 1926, 2142, 4095 |
| ApaLI | GTGCAC | 1 cut(s) | 4426 |
| ApoI | RAATTY | 8 cut(s) | 936, 1130, 2018, 2185, 2354, 2396, 4380, 4757 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2243, 2952, 3654 |
| AspLEI | GCGC | 4 cut(s) | 900, 3166, 4649, 4971 |
| AspS9I | GGNCC | 8 cut(s) | 1498, 1903, 1926, 2347, 3455, 4095, 4532, 4997 |
| AsuC2I | CCSGG | 1 cut(s) | 489 |
| AsuHPI | GGTGA | 7 cut(s) | 95, 772, 1091, 1592, 2014, 2434, 3400 |
| AvaI | CYCGRG | 1 cut(s) | 2131 |
| AvaII | GGWCC | 5 cut(s) | 1903, 2347, 3455, 4532, 4997 |
| AxyI | CCTNAGG | 1 cut(s) | 3759 |
| BaeGI | GKGCMC | 3 cut(s) | 400, 1062, 4430 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 4194, 4227 |
| BanI | GGYRCC | 2 cut(s) | 3401, 4318 |
| BanII | GRGCYC | 2 cut(s) | 168, 3430 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3456, 3488 |
| BauI | CACGAG | 2 cut(s) | 627, 2265 |
| BbsI | GAAGAC | 9 cut(s) | 189, 2246, 2591, 2805, 3123, 3599, 3627, 4344, 4375 |
| Bbv12I | GWGCWC | 6 cut(s) | 168, 262, 470, 2769, 3430, 4430 |
| BceAI | ACGGC | 3 cut(s) | 321, 416, 4534 |
| BciT130I | CCWGG | 4 cut(s) | 304, 720, 1502, 3646 |
| BclI | TGATCA | 1 cut(s) | 4248 |
| BcnI | CCSGG | 1 cut(s) | 489 |
| BfaI | CTAG | 9 cut(s) | 1035, 1259, 2523, 2927, 3138, 3389, 3503, 4799, 4985 |
| BfmI | CTRYAG | 4 cut(s) | 126, 1464, 3221, 4032 |
| BfoI | RGCGCY | 1 cut(s) | 3167 |
| BfrI | CTTAAG | 1 cut(s) | 1415 |
| BfuAI | ACCTGC | 3 cut(s) | 988, 3573, 5027 |
| BglII | AGATCT | 1 cut(s) | 4407 |
| BlpI | GCTNAGC | 2 cut(s) | 1520, 3468 |
| BmcAI | AGTACT | 1 cut(s) | 2989 |
| Bme1390I | CCNGG | 5 cut(s) | 304, 489, 720, 1502, 3646 |
| Bme18I | GGWCC | 5 cut(s) | 1903, 2347, 3455, 4532, 4997 |
| BmeT110I | CYCGRG | 1 cut(s) | 2131 |
| BmgBI | CACGTC | 2 cut(s) | 1109, 3349 |
| BmgT120I | GGNCC | 8 cut(s) | 1498, 1903, 1926, 2347, 3455, 4095, 4532, 4997 |
| BmiI | GGNNCC | 4 cut(s) | 1905, 3403, 4320, 4999 |
| BmrFI | CCNGG | 5 cut(s) | 304, 489, 720, 1502, 3646 |
| BmrI | ACTGGG | 1 cut(s) | 258 |
| BmuI | ACTGGG | 1 cut(s) | 258 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2088 |
| BpiI | GAAGAC | 9 cut(s) | 189, 2246, 2591, 2805, 3123, 3599, 3627, 4344, 4375 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1370, 1402 |
| BpmI | CTGGAG | 6 cut(s) | 239, 276, 1523, 1710, 2348, 2892 |
| Bpu10I | CCTNAGC | 1 cut(s) | 4536 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 1520, 3468 |
| BpuEI | CTTGAG | 2 cut(s) | 1463, 4586 |
| BpuMI | CCSGG | 1 cut(s) | 489 |
| Bsa29I | ATCGAT | 1 cut(s) | 4580 |
| BsaAI | YACGTR | 1 cut(s) | 533 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4950 |
| BsaHI | GRCGYC | 1 cut(s) | 361 |
| BsaI | GGTCTC | 2 cut(s) | 1394, 4178 |
| BsaJI | CCNNGG | 5 cut(s) | 303, 719, 2593, 2909, 3645 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2561, 2591, 3060, 3090 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 351, 1913, 2612, 2776, 2911, 3551, 4233 |
| Bse118I | RCCGGY | 1 cut(s) | 262 |
| Bse21I | CCTNAGG | 1 cut(s) | 3759 |
| Bse3DI | GCAATG | 4 cut(s) | 1514, 3497, 3570, 4269 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4950 |
| BseBI | CCWGG | 4 cut(s) | 304, 720, 1502, 3646 |
| BseCI | ATCGAT | 1 cut(s) | 4580 |
| BseDI | CCNNGG | 5 cut(s) | 303, 719, 2593, 2909, 3645 |
| BseJI | GATNNNNATC | 1 cut(s) | 4950 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 351, 1913, 2612, 2776, 2911, 3551, 4233 |
| BseMI | GCAATG | 4 cut(s) | 1514, 3497, 3570, 4269 |
| BseRI | GAGGAG | 4 cut(s) | 716, 2545, 3438, 4510 |
| BseSI | GKGCMC | 3 cut(s) | 400, 1062, 4430 |
| BseYI | CCCAGC | 1 cut(s) | 11 |
| BsgI | GTGCAG | 3 cut(s) | 468, 2159, 4806 |
| Bsh1236I | CGCG | 2 cut(s) | 898, 900 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3533 |
| BshFI | GGCC | 6 cut(s) | 336, 1445, 1500, 1928, 2144, 4097 |
| BshNI | GGYRCC | 2 cut(s) | 3401, 4318 |
| BshVI | ATCGAT | 1 cut(s) | 4580 |
| BsiEI | CGRYCG | 1 cut(s) | 3533 |
| BsiHKAI | GWGCWC | 6 cut(s) | 168, 262, 470, 2769, 3430, 4430 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2131 |
| BsiSI | CCGG | 3 cut(s) | 263, 489, 1442 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 351, 1913, 2612, 2776, 2911, 3551, 4233 |
| BsmBI | CGTCTC | 2 cut(s) | 352, 813 |
| BsmI | GAATGC | 7 cut(s) | 181, 2693, 3064, 3627, 3654, 3656, 4265 |
| BsnI | GGCC | 6 cut(s) | 336, 1445, 1500, 1928, 2144, 4097 |
| Bso31I | GGTCTC | 2 cut(s) | 1394, 4178 |
| BsoBI | CYCGRG | 1 cut(s) | 2131 |
| Bsp1286I | GDGCHC | 8 cut(s) | 168, 262, 400, 470, 1062, 2769, 3430, 4430 |
| Bsp1407I | TGTACA | 1 cut(s) | 1451 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 1520, 3468 |
| BspACI | CCGC | 6 cut(s) | 520, 1160, 2270, 2410, 2759, 4815 |
| BspANI | GGCC | 6 cut(s) | 336, 1445, 1500, 1928, 2144, 4097 |
| BspDI | ATCGAT | 1 cut(s) | 4580 |
| BspFNI | CGCG | 2 cut(s) | 898, 900 |
| BspHI | TCATGA | 2 cut(s) | 2122, 3952 |
| BspLI | GGNNCC | 4 cut(s) | 1905, 3403, 4320, 4999 |
| BspMAI | CTGCAG | 2 cut(s) | 130, 3225 |
| BspMI | ACCTGC | 3 cut(s) | 988, 3573, 5027 |
| BspT107I | GGYRCC | 2 cut(s) | 3401, 4318 |
| BspTI | CTTAAG | 1 cut(s) | 1415 |
| BspTNI | GGTCTC | 2 cut(s) | 1394, 4178 |
| BsrBI | CCGCTC | 1 cut(s) | 2270 |
| BsrDI | GCAATG | 4 cut(s) | 1514, 3497, 3570, 4269 |
| BsrFI | RCCGGY | 1 cut(s) | 262 |
| BsrGI | TGTACA | 1 cut(s) | 1451 |
| BssAI | RCCGGY | 1 cut(s) | 262 |
| BssECI | CCNNGG | 5 cut(s) | 303, 719, 2593, 2909, 3645 |
| BssNAI | GTATAC | 1 cut(s) | 1422 |
| BssNI | GRCGYC | 1 cut(s) | 361 |
| BssSI | CACGAG | 2 cut(s) | 627, 2265 |
| BssT1I | CCWWGG | 1 cut(s) | 2909 |
| Bst1107I | GTATAC | 1 cut(s) | 1422 |
| Bst2BI | CACGAG | 2 cut(s) | 627, 2265 |
| Bst2UI | CCWGG | 4 cut(s) | 304, 720, 1502, 3646 |
| Bst6I | CTCTTC | 9 cut(s) | 33, 350, 793, 1196, 1416, 1464, 2997, 3780, 4176 |
| BstACI | GRCGYC | 1 cut(s) | 361 |
| BstAFI | CTTAAG | 1 cut(s) | 1415 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 3229, 4271 |
| BstAUI | TGTACA | 1 cut(s) | 1451 |
| BstBAI | YACGTR | 1 cut(s) | 533 |
| BstC8I | GCNNGC | 3 cut(s) | 1297, 2142, 4442 |
| BstEII | GGTNACC | 1 cut(s) | 2440 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1911 |
| BstFNI | CGCG | 2 cut(s) | 898, 900 |
| BstH2I | RGCGCY | 1 cut(s) | 3167 |
| BstHHI | GCGC | 4 cut(s) | 900, 3166, 4649, 4971 |
| BstMCI | CGRYCG | 1 cut(s) | 3533 |
| BstNI | CCWGG | 4 cut(s) | 304, 720, 1502, 3646 |
| BstNSI | RCATGY | 3 cut(s) | 2324, 4444, 4829 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2088 |
| BstPI | GGTNACC | 1 cut(s) | 2440 |
| BstSCI | CCNGG | 5 cut(s) | 302, 487, 718, 1500, 3644 |
| BstSFI | CTRYAG | 4 cut(s) | 126, 1464, 3221, 4032 |
| BstSLI | GKGCMC | 3 cut(s) | 400, 1062, 4430 |
| BstUI | CGCG | 2 cut(s) | 898, 900 |
| BstV2I | GAAGAC | 9 cut(s) | 189, 2246, 2591, 2805, 3123, 3599, 3627, 4344, 4375 |
| BstX2I | RGATCY | 6 cut(s) | 2417, 2615, 2867, 3145, 3754, 4407 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 913, 3160, 4783 |
| BstYI | RGATCY | 6 cut(s) | 2417, 2615, 2867, 3145, 3754, 4407 |
| BstZ17I | GTATAC | 1 cut(s) | 1422 |
| Bsu15I | ATCGAT | 1 cut(s) | 4580 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3759 |
| BsuRI | GGCC | 6 cut(s) | 336, 1445, 1500, 1928, 2144, 4097 |
| BsuTUI | ATCGAT | 1 cut(s) | 4580 |
| BtrI | CACGTC | 2 cut(s) | 1109, 3349 |
| BtsI | GCAGTG | 1 cut(s) | 3230 |
| BveI | ACCTGC | 3 cut(s) | 988, 3573, 5027 |
| Cac8I | GCNNGC | 3 cut(s) | 1297, 2142, 4442 |
| CaiI | CAGNNNCTG | 1 cut(s) | 3229 |
| CciI | TCATGA | 2 cut(s) | 2122, 3952 |
| CfoI | GCGC | 4 cut(s) | 900, 3166, 4649, 4971 |
| Cfr10I | RCCGGY | 1 cut(s) | 262 |
| Cfr13I | GGNCC | 8 cut(s) | 1498, 1903, 1926, 2347, 3455, 4095, 4532, 4997 |
| ClaI | ATCGAT | 1 cut(s) | 4580 |
| CseI | GACGC | 1 cut(s) | 2596 |
| DraI | TTTAAA | 1 cut(s) | 3118 |
| EaeI | YGGCCR | 1 cut(s) | 334 |
| Eam1104I | CTCTTC | 9 cut(s) | 33, 350, 793, 1196, 1416, 1464, 2997, 3780, 4176 |
| EarI | CTCTTC | 9 cut(s) | 33, 350, 793, 1196, 1416, 1464, 2997, 3780, 4176 |
| Ecl136II | GAGCTC | 2 cut(s) | 166, 3428 |
| Eco130I | CCWWGG | 1 cut(s) | 2909 |
| Eco147I | AGGCCT | 1 cut(s) | 2144 |
| Eco24I | GRGCYC | 2 cut(s) | 168, 3430 |
| Eco31I | GGTCTC | 2 cut(s) | 1394, 4178 |
| Eco47I | GGWCC | 5 cut(s) | 1903, 2347, 3455, 4532, 4997 |
| Eco53kI | GAGCTC | 2 cut(s) | 166, 3428 |
| Eco57I | CTGAAG | 5 cut(s) | 201, 2603, 2898, 3584, 4697 |
| Eco81I | CCTNAGG | 1 cut(s) | 3759 |
| Eco88I | CYCGRG | 1 cut(s) | 2131 |
| Eco91I | GGTNACC | 1 cut(s) | 2440 |
| EcoICRI | GAGCTC | 2 cut(s) | 166, 3428 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1911 |
| EcoO109I | RGGNCCY | 1 cut(s) | 4997 |
| EcoO65I | GGTNACC | 1 cut(s) | 2440 |
| EcoRI | GAATTC | 3 cut(s) | 936, 2185, 4757 |
| EcoRII | CCWGG | 4 cut(s) | 302, 718, 1500, 3644 |
| EcoT14I | CCWWGG | 1 cut(s) | 2909 |
| EcoT22I | ATGCAT | 4 cut(s) | 3064, 3656, 4831, 4951 |
| EcoT38I | GRGCYC | 2 cut(s) | 168, 3430 |
| ErhI | CCWWGG | 1 cut(s) | 2909 |
| Esp3I | CGTCTC | 2 cut(s) | 352, 813 |
| FauI | CCCGC | 1 cut(s) | 4822 |
| FauNDI | CATATG | 3 cut(s) | 1270, 1711, 2752 |
| FbaI | TGATCA | 1 cut(s) | 4248 |
| FblI | GTMKAC | 3 cut(s) | 1338, 1421, 3448 |
| FriOI | GRGCYC | 2 cut(s) | 168, 3430 |
| FspBI | CTAG | 9 cut(s) | 1035, 1259, 2523, 2927, 3138, 3389, 3503, 4799, 4985 |
| FspI | TGCGCA | 1 cut(s) | 4648 |
| GlaI | GCGC | 4 cut(s) | 899, 3165, 4648, 4970 |
| GsaI | CCCAGC | 1 cut(s) | 15 |
| GsuI | CTGGAG | 6 cut(s) | 239, 276, 1523, 1710, 2348, 2892 |
| HaeII | RGCGCY | 1 cut(s) | 3167 |
| HaeIII | GGCC | 6 cut(s) | 336, 1445, 1500, 1928, 2144, 4097 |
| HapII | CCGG | 3 cut(s) | 263, 489, 1442 |
| HgaI | GACGC | 1 cut(s) | 2596 |
| HhaI | GCGC | 4 cut(s) | 900, 3166, 4649, 4971 |
| Hin1I | GRCGYC | 1 cut(s) | 361 |
| Hin6I | GCGC | 4 cut(s) | 898, 3164, 4647, 4969 |
| HinP1I | GCGC | 4 cut(s) | 898, 3164, 4647, 4969 |
| HincII | GTYRAC | 1 cut(s) | 4159 |
| HindII | GTYRAC | 1 cut(s) | 4159 |
| HpaII | CCGG | 3 cut(s) | 263, 489, 1442 |
| HphI | GGTGA | 7 cut(s) | 95, 772, 1091, 1592, 2014, 2434, 3400 |
| Hpy99I | CGWCG | 2 cut(s) | 1110, 1629 |
| HpyCH4IV | ACGT | 8 cut(s) | 361, 532, 806, 1108, 1627, 2790, 3172, 3348 |
| HpySE526I | ACGT | 8 cut(s) | 361, 532, 806, 1108, 1627, 2790, 3172, 3348 |
| Hsp92I | GRCGYC | 1 cut(s) | 361 |
| HspAI | GCGC | 4 cut(s) | 898, 3164, 4647, 4969 |
| Ksp22I | TGATCA | 1 cut(s) | 4248 |
| MaeI | CTAG | 9 cut(s) | 1035, 1259, 2523, 2927, 3138, 3389, 3503, 4799, 4985 |
| MaeII | ACGT | 8 cut(s) | 361, 532, 806, 1108, 1627, 2790, 3172, 3348 |
| MbiI | CCGCTC | 1 cut(s) | 2270 |
| MfeI | CAATTG | 4 cut(s) | 1669, 1854, 3311, 3728 |
| MflI | RGATCY | 6 cut(s) | 2417, 2615, 2867, 3145, 3754, 4407 |
| MhlI | GDGCHC | 8 cut(s) | 168, 262, 400, 470, 1062, 2769, 3430, 4430 |
| MlyI | GAGTC | 7 cut(s) | 208, 311, 1031, 1379, 1447, 3265, 3865 |
| MmeI | TCCRAC | 3 cut(s) | 457, 1848, 3648 |
| Mph1103I | ATGCAT | 4 cut(s) | 3064, 3656, 4831, 4951 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2243, 2952, 3654 |
| MslI | CAYNNNNRTG | 1 cut(s) | 3158 |
| MspA1I | CMGCKG | 1 cut(s) | 4820 |
| MspCI | CTTAAG | 1 cut(s) | 1415 |
| MspI | CCGG | 3 cut(s) | 263, 489, 1442 |
| MspR9I | CCNGG | 5 cut(s) | 304, 489, 720, 1502, 3646 |
| MunI | CAATTG | 4 cut(s) | 1669, 1854, 3311, 3728 |
| Mva1269I | GAATGC | 7 cut(s) | 181, 2693, 3064, 3627, 3654, 3656, 4265 |
| MvaI | CCWGG | 4 cut(s) | 304, 720, 1502, 3646 |
| MvnI | CGCG | 2 cut(s) | 898, 900 |
| NciI | CCSGG | 1 cut(s) | 489 |
| NdeI | CATATG | 3 cut(s) | 1270, 1711, 2752 |
| NlaIV | GGNNCC | 4 cut(s) | 1905, 3403, 4320, 4999 |
| NmuCI | GTSAC | 6 cut(s) | 112, 847, 2440, 2746, 3795, 4117 |
| NsbI | TGCGCA | 1 cut(s) | 4648 |
| NsiI | ATGCAT | 4 cut(s) | 3064, 3656, 4831, 4951 |
| NspI | RCATGY | 3 cut(s) | 2324, 4444, 4829 |
| PaeI | GCATGC | 1 cut(s) | 4444 |
| PaeR7I | CTCGAG | 1 cut(s) | 2131 |
| PagI | TCATGA | 2 cut(s) | 2122, 3952 |
| PaqCI | CACCTGC | 1 cut(s) | 3573 |
| PceI | AGGCCT | 1 cut(s) | 2144 |
| PctI | GAATGC | 7 cut(s) | 181, 2693, 3064, 3627, 3654, 3656, 4265 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2243, 2952, 3654 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2776 |
| Ple19I | CGATCG | 1 cut(s) | 3533 |
| PleI | GAGTC | 7 cut(s) | 208, 311, 1030, 1379, 1446, 3265, 3864 |
| PpsI | GAGTC | 7 cut(s) | 208, 311, 1030, 1379, 1446, 3265, 3864 |
| Ppu21I | YACGTR | 1 cut(s) | 533 |
| PpuMI | RGGWCCY | 1 cut(s) | 4997 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2088 |
| PsiI | TTATAA | 2 cut(s) | 2256, 3609 |
| Psp124BI | GAGCTC | 2 cut(s) | 168, 3430 |
| Psp5II | RGGWCCY | 1 cut(s) | 4997 |
| Psp6I | CCWGG | 4 cut(s) | 302, 718, 1500, 3644 |
| PspEI | GGTNACC | 1 cut(s) | 2440 |
| PspFI | CCCAGC | 1 cut(s) | 11 |
| PspGI | CCWGG | 4 cut(s) | 302, 718, 1500, 3644 |
| PspN4I | GGNNCC | 4 cut(s) | 1905, 3403, 4320, 4999 |
| PspPI | GGNCC | 8 cut(s) | 1498, 1903, 1926, 2347, 3455, 4095, 4532, 4997 |
| PspPPI | RGGWCCY | 1 cut(s) | 4997 |
| PstI | CTGCAG | 2 cut(s) | 130, 3225 |
| PstNI | CAGNNNCTG | 1 cut(s) | 3229 |
| PsuI | RGATCY | 6 cut(s) | 2417, 2615, 2867, 3145, 3754, 4407 |
| PvuI | CGATCG | 1 cut(s) | 3533 |
| PvuII | CAGCTG | 1 cut(s) | 4820 |
| RseI | CAYNNNNRTG | 1 cut(s) | 3158 |
| SacI | GAGCTC | 2 cut(s) | 168, 3430 |
| Sau96I | GGNCC | 8 cut(s) | 1498, 1903, 1926, 2347, 3455, 4095, 4532, 4997 |
| ScaI | AGTACT | 1 cut(s) | 2989 |
| SchI | GAGTC | 7 cut(s) | 208, 311, 1031, 1379, 1447, 3265, 3865 |
| ScrFI | CCNGG | 5 cut(s) | 304, 489, 720, 1502, 3646 |
| SduI | GDGCHC | 8 cut(s) | 168, 262, 400, 470, 1062, 2769, 3430, 4430 |
| SfcI | CTRYAG | 4 cut(s) | 126, 1464, 3221, 4032 |
| Sfr274I | CTCGAG | 1 cut(s) | 2131 |
| SinI | GGWCC | 5 cut(s) | 1903, 2347, 3455, 4532, 4997 |
| SlaI | CTCGAG | 1 cut(s) | 2131 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 3158 |
| SmlI | CTYRAG | 4 cut(s) | 1415, 1478, 2131, 4565 |
| SmoI | CTYRAG | 4 cut(s) | 1415, 1478, 2131, 4565 |
| SphI | GCATGC | 1 cut(s) | 4444 |
| SseBI | AGGCCT | 1 cut(s) | 2144 |
| SsiI | CCGC | 6 cut(s) | 520, 1160, 2270, 2410, 2759, 4815 |
| SspMI | CTAG | 9 cut(s) | 1035, 1259, 2523, 2927, 3138, 3389, 3503, 4799, 4985 |
| SstI | GAGCTC | 2 cut(s) | 168, 3430 |
| StuI | AGGCCT | 1 cut(s) | 2144 |
| StyD4I | CCNGG | 5 cut(s) | 302, 487, 718, 1500, 3644 |
| StyI | CCWWGG | 1 cut(s) | 2909 |
| TaiI | ACGT | 8 cut(s) | 364, 535, 809, 1111, 1630, 2793, 3175, 3351 |
| TaqI | TCGA | 7 cut(s) | 1105, 1486, 1745, 2132, 4304, 4470, 4580 |
| TaqII | GACCGA | 1 cut(s) | 248 |
| TatI | WGTACW | 7 cut(s) | 192, 1451, 2987, 3351, 3946, 4588, 4652 |
| TauI | GCSGC | 2 cut(s) | 523, 2413 |
| TseFI | GTSAC | 6 cut(s) | 112, 847, 2440, 2746, 3795, 4117 |
| Tsp45I | GTSAC | 6 cut(s) | 112, 847, 2440, 2746, 3795, 4117 |
| TspGWI | ACGGA | 4 cut(s) | 1132, 2087, 2628, 3420 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2776 |
| Vha464I | CTTAAG | 1 cut(s) | 1415 |
| VneI | GTGCAC | 1 cut(s) | 4426 |
| VpaK11BI | GGWCC | 5 cut(s) | 1903, 2347, 3455, 4532, 4997 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1911 |
| XapI | RAATTY | 8 cut(s) | 936, 1130, 2018, 2185, 2354, 2396, 4380, 4757 |
| XbaI | TCTAGA | 1 cut(s) | 2522 |
| XceI | RCATGY | 3 cut(s) | 2324, 4444, 4829 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 4513 |
| XhoI | CTCGAG | 1 cut(s) | 2131 |
| XmiI | GTMKAC | 3 cut(s) | 1338, 1421, 3448 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2243, 2952, 3654 |
| XspI | CTAG | 9 cut(s) | 1035, 1259, 2523, 2927, 3138, 3389, 3503, 4799, 4985 |
| ZraI | GACGTC | 1 cut(s) | 362 |
| ZrmI | AGTACT | 1 cut(s) | 2989 |
| Zsp2I | ATGCAT | 4 cut(s) | 3064, 3656, 4831, 4951 |