Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000868

Physical Location & Seq

Genomic Coordinates Reverse (-)

10206133 .. 10210395

Gene Structure 4263 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0126700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGGGAGCCCGCTGCTCCAGATTCTCTCTCTGCTGGTTCCACTCCCACCTTAAACCCTCCGTCCTCGAATCCACCGACCTCGAGAATGGGGGCGGCAAAAGCGACAAAAACTCGTGCCCGAGCTTCACCGAGTTCAGCTTAGACCAACTGAAAGCCGCCACGTGCGGCTTCTCCTCCGACAACATAGTCTCCGAGCACGGCGAGAAGGCCCCCAACGTTGTCTACAAAGGAAAGCTCGACAACAACGCCGACCGTTGGATCGCTGTCAAACGCTTCAACAAGCTGGCCTGGCCCGATTCTCGCCAATTCCTCGAGGAAGCAAGATCGGTTGGGACATTGAGAAGTGAGAGATTGGCGAATCTAATTGGGTGTTGTTGTGAAGGAGATGAGAGGTTGTTGGTGGCTGAGTTTATGCCACATGAGACTTTGGCGAAGCATTTGTTTCATTGGGAGAGCCAGCCAATGAGATGGGCTATGAGGTTGAGGGTGGCTCTGTATTTGGCTCAGGCTCTTGAGTATTGTAGTGGTAAAGGGCGTGCATTGTATCATGATCTCAATGCTTACAGGGTTTTGTTTGATAAGGATGCGAATCCGAGGCTGTCCTGCTTTGGACTTATGAAGAATAGCAGGGATGGGAAGAGTTACAGTACTAACTTGGCCTTTACCCCACCAGAGTACCTCAGGACAGGTAGGGTGACACAAGAAAGTGTAGTTTACAGCTTTGGAACCTTGTTGCTAGATCTTCTAAGTGGCAAACATATTCCCCCCAGCCATGCACTAGATCTTATTCGTGGCAAGAATTTCCTGATGCTGATGGATTCGGCTCTGGAGGGTAATTTCTCAAATGATGACGGAACCGAGTTAGTACGCTTGGCTTCCCGTTGTCTGCAATATGAAGCTCGTGAGAGGCCTAATGCGAAATCCCTTGCCACTGCTCTTATGTCACTTCAGAAAGAAACAGAGGTTGCATCCTATGTTTTGATGGGTATCCCACAAGAAACTGCAGCCTCAACACAGCCACTGTCATTAACTCCTTTTGGTGAAGCTTGTTTGAGAATGGATCTGACAGCCATACATGAAATACTGGAGAAGAATGGATACAAGGATGATGAGGGAATTGCTAATGAGCTATCTTTCCAGCTGTGGACTAATCAAATGCAGGAGACCTTGGATTCTAAGAAGAGTGCAGATTCTGCTTTTAGAGCGAAAGACTACGCAACTGCAATTGATTCCTATACACAATTCATTGATTGTGGGACAATGGTATCACCAACGGTGTATGCTCGGCGTTGTCTGTCATACTTGATGAATGATATGGCACAAGAAGCCCTTGGGGATGCTATGCAAGCCCAGGTGATTTCTCCCGAGTGGCCCTGTGCTTTATATCTTCAAGCAGCTTGCCTATTCAAGCTTGGAATGGACAATGATGCACAAGAAACACTCAAAGATGGCACAAACTTGGAAGCCAAAAAGAACAGAACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

494

Amino Acids

55.3

Weight (kDa)

5.79

Isoelectric Point (pI)

36.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	73 - 312	1.2e-26	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	73 - 309	2.9e-20	Protein kinase domain
TPR_BSK1_C	PF25575	348 - 465	5.1e-63	Serine/threonine-protein kinase BSK1-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000868)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	185
AbsI	CCTCGAGG	1 cut(s)	311
AccI	GTMKAC	1 cut(s)	222
AciI	CCGC	4 cut(s)	10, 93, 156, 165
AclI	AACGTT	1 cut(s)	216
AclWI	GGATC	2 cut(s)	266, 1068
AcsI	RAATTY	1 cut(s)	799
AcuI	CTGAAG	1 cut(s)	932
AcvI	CACGTG	1 cut(s)	162
AfaI	GTAC	3 cut(s)	649, 677, 867
AfiI	CCNNNNNNNGG	1 cut(s)	255
AgsI	TTSAA	3 cut(s)	277, 1391, 1408
AjnI	CCWGG	2 cut(s)	287, 1350
Alw21I	GWGCWC	1 cut(s)	198
Alw26I	GTCTC	3 cut(s)	193, 416, 1157
AlwI	GGATC	2 cut(s)	266, 1068
AlwNI	CAGNNNCTG	2 cut(s)	1021, 1193
Ama87I	CYCGRG	4 cut(s)	80, 118, 311, 1364
AoxI	GGCC	6 cut(s)	207, 285, 290, 657, 908, 1370
ApeKI	GCWGC	3 cut(s)	12, 1004, 1394
ApoI	RAATTY	1 cut(s)	799
AspS9I	GGNCC	3 cut(s)	208, 291, 1371
AsuHPI	GGTGA	5 cut(s)	118, 706, 1052, 1260, 1366
AvaI	CYCGRG	4 cut(s)	80, 118, 311, 1364
AxyI	CCTNAGG	1 cut(s)	680
BaeGI	GKGCMC	1 cut(s)	119
BaeI	ACNNNNGTAYC	4 cut(s)	659, 692, 1248, 1281
BanII	GRGCYC	1 cut(s)	10
BarI	GAAGNNNNNNTAC	2 cut(s)	1082, 1114
BauI	CACGAG	2 cut(s)	112, 900
BbrPI	CACGTG	1 cut(s)	162
Bbv12I	GWGCWC	1 cut(s)	198
BbvI	GCAGC	2 cut(s)	1016, 1406
BccI	CCATC	5 cut(s)	462, 626, 808, 976, 1442
BceAI	ACGGC	1 cut(s)	214
BciT130I	CCWGG	2 cut(s)	289, 1352
BciVI	GTATCC	2 cut(s)	998, 1091
BcoDI	GTCTC	3 cut(s)	193, 416, 1157
BfaI	CTAG	2 cut(s)	737, 779
BfmI	CTRYAG	1 cut(s)	1002
BfuI	GTATCC	2 cut(s)	998, 1091
BglII	AGATCT	2 cut(s)	739, 781
BisI	GCNGC	6 cut(s)	13, 94, 156, 166, 1005, 1395
BlsI	GCNGC	6 cut(s)	14, 95, 157, 167, 1006, 1396
BmcAI	AGTACT	1 cut(s)	649
Bme1390I	CCNGG	2 cut(s)	289, 1352
BmeT110I	CYCGRG	4 cut(s)	80, 118, 311, 1364
BmgT120I	GGNCC	3 cut(s)	208, 291, 1371
BmiI	GGNNCC	5 cut(s)	7, 38, 210, 727, 856
BmrFI	CCNGG	2 cut(s)	289, 1352
BmsI	GCATC	5 cut(s)	574, 798, 977, 1327, 1417
BplI	GAGNNNNNCTC	2 cut(s)	475, 507
BpmI	CTGGAG	2 cut(s)	848, 1106
Bpu10I	CCTNAGC	1 cut(s)	504
BpuEI	CTTGAG	1 cut(s)	533
BsaAI	YACGTR	1 cut(s)	162
BsaBI	GATNNNNATC	2 cut(s)	588, 986
BsaI	GGTCTC	1 cut(s)	1157
BsaJI	CCNNGG	4 cut(s)	593, 1167, 1330, 1350
BsaXI	ACNNNNNCTCC	2 cut(s)	173, 203
Bsc4I	CCNNNNNNNGG	1 cut(s)	255
Bse1I	ACTGG	1 cut(s)	1089
Bse21I	CCTNAGG	1 cut(s)	680
Bse8I	GATNNNNATC	2 cut(s)	588, 986
BseBI	CCWGG	2 cut(s)	289, 1352
BseDI	CCNNGG	4 cut(s)	593, 1167, 1330, 1350
BseGI	GGATG	5 cut(s)	589, 637, 968, 1111, 1342
BseJI	GATNNNNATC	2 cut(s)	588, 986
BseLI	CCNNNNNNNGG	1 cut(s)	255
BseMII	CTCAG	3 cut(s)	396, 518, 694
BseNI	ACTGG	1 cut(s)	1089
BseRI	GAGGAG	1 cut(s)	163
BseSI	GKGCMC	1 cut(s)	119
BseXI	GCAGC	2 cut(s)	1016, 1406
BseYI	CCCAGC	1 cut(s)	767
BsgI	GTGCAG	1 cut(s)	1206
Bsh1285I	CGRYCG	1 cut(s)	253
BshFI	GGCC	6 cut(s)	209, 287, 292, 659, 910, 1372
BsiEI	CGRYCG	1 cut(s)	253
BsiHKAI	GWGCWC	1 cut(s)	198
BsiHKCI	CYCGRG	4 cut(s)	80, 118, 311, 1364
BslFI	GGGAC	2 cut(s)	346, 1270
BslI	CCNNNNNNNGG	1 cut(s)	255
BsmAI	GTCTC	3 cut(s)	193, 416, 1157
BsmFI	GGGAC	2 cut(s)	346, 1270
BsnI	GGCC	6 cut(s)	209, 287, 292, 659, 910, 1372
Bso31I	GGTCTC	1 cut(s)	1157
BsoBI	CYCGRG	4 cut(s)	80, 118, 311, 1364
Bsp1286I	GDGCHC	3 cut(s)	10, 119, 198
Bsp143I	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
BspACI	CCGC	4 cut(s)	10, 93, 156, 165
BspANI	GGCC	6 cut(s)	209, 287, 292, 659, 910, 1372
BspCNI	CTCAG	3 cut(s)	397, 517, 693
BspHI	TCATGA	1 cut(s)	547
BspLI	GGNNCC	5 cut(s)	7, 38, 210, 727, 856
BspMAI	CTGCAG	1 cut(s)	1006
BspPI	GGATC	2 cut(s)	266, 1068
BspTNI	GGTCTC	1 cut(s)	1157
BsrI	ACTGG	1 cut(s)	1089
BssECI	CCNNGG	4 cut(s)	593, 1167, 1330, 1350
BssMI	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
BssSI	CACGAG	2 cut(s)	112, 900
BssT1I	CCWWGG	2 cut(s)	1167, 1330
Bst2BI	CACGAG	2 cut(s)	112, 900
Bst2UI	CCWGG	2 cut(s)	289, 1352
Bst4CI	ACNGT	4 cut(s)	254, 647, 1023, 1276
Bst6I	CTCTTC	2 cut(s)	632, 1175
BstAPI	GCANNNNNTGC	1 cut(s)	1193
BstBAI	YACGTR	1 cut(s)	162
BstC8I	GCNNGC	6 cut(s)	10, 285, 458, 537, 1347, 1399
BstDEI	CTNAG	6 cut(s)	139, 405, 504, 680, 746, 1176
BstF5I	GGATG	5 cut(s)	589, 637, 968, 1111, 1342
BstKTI	GATC	6 cut(s)	261, 326, 553, 742, 784, 1063
BstMAI	GTCTC	3 cut(s)	193, 416, 1157
BstMBI	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
BstMCI	CGRYCG	1 cut(s)	253
BstMWI	GCNNNNNNNGC	6 cut(s)	99, 289, 1193, 1202, 1325, 1346
BstNI	CCWGG	2 cut(s)	289, 1352
BstSCI	CCNGG	2 cut(s)	287, 1350
BstSFI	CTRYAG	1 cut(s)	1002
BstSLI	GKGCMC	1 cut(s)	119
BstV1I	GCAGC	2 cut(s)	1016, 1406
BstX2I	RGATCY	3 cut(s)	739, 781, 1060
BstXI	CCANNNNNNTGG	1 cut(s)	468
BstYI	RGATCY	3 cut(s)	739, 781, 1060
Bsu36I	CCTNAGG	1 cut(s)	680
BsuI	GTATCC	2 cut(s)	998, 1091
BsuRI	GGCC	6 cut(s)	209, 287, 292, 659, 910, 1372
BtsCI	GGATG	5 cut(s)	589, 637, 968, 1111, 1342
BtsI	GCAGTG	1 cut(s)	930
BtsIMutI	CAGTG	2 cut(s)	930, 1019
Cac8I	GCNNGC	6 cut(s)	10, 285, 458, 537, 1347, 1399
CaiI	CAGNNNCTG	2 cut(s)	1021, 1193
CciI	TCATGA	1 cut(s)	547
Cfr13I	GGNCC	3 cut(s)	208, 291, 1371
Csp6I	GTAC	3 cut(s)	648, 676, 866
CviAII	CATG	4 cut(s)	419, 548, 773, 1076
CviQI	GTAC	3 cut(s)	648, 676, 866
DdeI	CTNAG	6 cut(s)	139, 405, 504, 680, 746, 1176
DpnI	GATC	6 cut(s)	260, 325, 552, 741, 783, 1062
DpnII	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
DrdI	GACNNNNNNGTC	1 cut(s)	185
DseDI	GACNNNNNNGTC	1 cut(s)	185
Eam1104I	CTCTTC	2 cut(s)	632, 1175
EarI	CTCTTC	2 cut(s)	632, 1175
Eco130I	CCWWGG	2 cut(s)	1167, 1330
Eco147I	AGGCCT	1 cut(s)	910
Eco24I	GRGCYC	1 cut(s)	10
Eco31I	GGTCTC	1 cut(s)	1157
Eco57I	CTGAAG	1 cut(s)	932
Eco72I	CACGTG	1 cut(s)	162
Eco81I	CCTNAGG	1 cut(s)	680
Eco88I	CYCGRG	4 cut(s)	80, 118, 311, 1364
EcoO109I	RGGNCCY	1 cut(s)	208
EcoRII	CCWGG	2 cut(s)	287, 1350
EcoT14I	CCWWGG	2 cut(s)	1167, 1330
EcoT38I	GRGCYC	1 cut(s)	10
ErhI	CCWWGG	2 cut(s)	1167, 1330
FaeI	CATG	4 cut(s)	422, 551, 776, 1079
FalI	AAGNNNNNCTT	2 cut(s)	1314, 1346
FaqI	GGGAC	2 cut(s)	346, 1270
FatI	CATG	4 cut(s)	418, 547, 772, 1075
FauI	CCCGC	1 cut(s)	17
FblI	GTMKAC	1 cut(s)	222
Fnu4HI	GCNGC	6 cut(s)	13, 94, 156, 166, 1005, 1395
FokI	GGATG	5 cut(s)	596, 644, 955, 1118, 1349
FriOI	GRGCYC	1 cut(s)	10
Fsp4HI	GCNGC	6 cut(s)	13, 94, 156, 166, 1005, 1395
FspBI	CTAG	2 cut(s)	737, 779
GluI	GCNGC	6 cut(s)	13, 94, 156, 166, 1005, 1395
GsaI	CCCAGC	1 cut(s)	771
GsuI	CTGGAG	2 cut(s)	848, 1106
HaeIII	GGCC	6 cut(s)	209, 287, 292, 659, 910, 1372
Hin1II	CATG	4 cut(s)	422, 551, 776, 1079
HindIII	AAGCTT	2 cut(s)	1044, 1409
HinfI	GANTC	9 cut(s)	21, 68, 296, 358, 589, 818, 1172, 1190, 1229
HphI	GGTGA	5 cut(s)	118, 706, 1052, 1260, 1366
Hpy166II	GTNNAC	3 cut(s)	223, 715, 1146
Hpy188I	TCNGA	5 cut(s)	178, 193, 594, 951, 1065
Hpy188III	TCNNGA	9 cut(s)	18, 82, 512, 548, 682, 805, 827, 902, 1364
Hpy8I	GTNNAC	3 cut(s)	223, 715, 1146
HpyAV	CCTTC	2 cut(s)	199, 374
HpyCH4III	ACNGT	4 cut(s)	254, 647, 1023, 1276
HpyCH4IV	ACGT	2 cut(s)	161, 216
HpyF10VI	GCNNNNNNNGC	6 cut(s)	99, 289, 1193, 1202, 1325, 1346
HpyF3I	CTNAG	6 cut(s)	139, 405, 504, 680, 746, 1176
HpySE526I	ACGT	2 cut(s)	161, 216
Hsp92II	CATG	4 cut(s)	422, 551, 776, 1079
Kzo9I	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
LmnI	GCTCC	2 cut(s)	5, 20
Lsp1109I	GCAGC	2 cut(s)	1016, 1406
LweI	GCATC	5 cut(s)	574, 798, 977, 1327, 1417
MaeI	CTAG	2 cut(s)	737, 779
MaeII	ACGT	2 cut(s)	161, 216
MaeIII	GTNAC	3 cut(s)	641, 694, 942
MalI	GATC	6 cut(s)	260, 325, 552, 741, 783, 1062
MboI	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
MboII	GAAGA	6 cut(s)	631, 649, 734, 1102, 1192, 1379
MfeI	CAATTG	1 cut(s)	1224
MflI	RGATCY	3 cut(s)	739, 781, 1060
MhlI	GDGCHC	3 cut(s)	10, 119, 198
MluCI	AATT	7 cut(s)	305, 363, 799, 835, 1116, 1224, 1241
MmeI	TCCRAC	2 cut(s)	201, 236
MseI	TTAA	2 cut(s)	51, 1028
MspA1I	CMGCKG	2 cut(s)	12, 1141
MspR9I	CCNGG	2 cut(s)	289, 1352
MunI	CAATTG	1 cut(s)	1224
MvaI	CCWGG	2 cut(s)	289, 1352
MwoI	GCNNNNNNNGC	6 cut(s)	99, 289, 1193, 1202, 1325, 1346
NdeII	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
NlaIII	CATG	4 cut(s)	422, 551, 776, 1079
NlaIV	GGNNCC	5 cut(s)	7, 38, 210, 727, 856
NmeAIII	GCCGAG	1 cut(s)	1264
NmuCI	GTSAC	2 cut(s)	694, 942
PaeR7I	CTCGAG	2 cut(s)	80, 311
PagI	TCATGA	1 cut(s)	547
PceI	AGGCCT	1 cut(s)	910
PcsI	WCGNNNNNNNCGW	1 cut(s)	72
PfeI	GAWTC	9 cut(s)	21, 68, 296, 358, 589, 818, 1172, 1190, 1229
PkrI	GCNGC	6 cut(s)	14, 95, 157, 167, 1006, 1396
PmaCI	CACGTG	1 cut(s)	162
PmlI	CACGTG	1 cut(s)	162
Ppu21I	YACGTR	1 cut(s)	162
Psp1406I	AACGTT	1 cut(s)	216
Psp6I	CCWGG	2 cut(s)	287, 1350
PspCI	CACGTG	1 cut(s)	162
PspFI	CCCAGC	1 cut(s)	767
PspGI	CCWGG	2 cut(s)	287, 1350
PspN4I	GGNNCC	5 cut(s)	7, 38, 210, 727, 856
PspPI	GGNCC	3 cut(s)	208, 291, 1371
PspXI	VCTCGAGB	1 cut(s)	311
PstI	CTGCAG	1 cut(s)	1006
PstNI	CAGNNNCTG	2 cut(s)	1021, 1193
PsuI	RGATCY	3 cut(s)	739, 781, 1060
PvuII	CAGCTG	1 cut(s)	1141
RsaI	GTAC	3 cut(s)	649, 677, 867
RsaNI	GTAC	3 cut(s)	648, 676, 866
SaqAI	TTAA	2 cut(s)	51, 1028
SatI	GCNGC	6 cut(s)	13, 94, 156, 166, 1005, 1395
Sau3AI	GATC	6 cut(s)	258, 323, 550, 739, 781, 1060
Sau96I	GGNCC	3 cut(s)	208, 291, 1371
ScaI	AGTACT	1 cut(s)	649
ScrFI	CCNGG	2 cut(s)	289, 1352
SduI	GDGCHC	3 cut(s)	10, 119, 198
SfaNI	GCATC	5 cut(s)	574, 798, 977, 1327, 1417
SfcI	CTRYAG	1 cut(s)	1002
Sfr274I	CTCGAG	2 cut(s)	80, 311
SlaI	CTCGAG	2 cut(s)	80, 311
SmlI	CTYRAG	3 cut(s)	80, 311, 512
SmoI	CTYRAG	3 cut(s)	80, 311, 512
Sse9I	AATT	7 cut(s)	305, 363, 799, 835, 1116, 1224, 1241
SseBI	AGGCCT	1 cut(s)	910
SsiI	CCGC	4 cut(s)	10, 93, 156, 165
SspMI	CTAG	2 cut(s)	737, 779
StuI	AGGCCT	1 cut(s)	910
StyD4I	CCNGG	2 cut(s)	287, 1350
StyI	CCWWGG	2 cut(s)	1167, 1330
TaaI	ACNGT	4 cut(s)	254, 647, 1023, 1276
TaiI	ACGT	2 cut(s)	164, 219
TaqI	TCGA	4 cut(s)	66, 81, 237, 312
TasI	AATT	7 cut(s)	305, 363, 799, 835, 1116, 1224, 1241
TatI	WGTACW	1 cut(s)	647
TauI	GCSGC	3 cut(s)	96, 158, 168
TfiI	GAWTC	9 cut(s)	21, 68, 296, 358, 589, 818, 1172, 1190, 1229
Tru1I	TTAA	2 cut(s)	51, 1028
Tru9I	TTAA	2 cut(s)	51, 1028
TscAI	CASTG	2 cut(s)	937, 1026
TseFI	GTSAC	2 cut(s)	694, 942
TseI	GCWGC	3 cut(s)	12, 1004, 1394
Tsp45I	GTSAC	2 cut(s)	694, 942
TspDTI	ATGAA	6 cut(s)	434, 632, 909, 1092, 1234, 1322
TspGWI	ACGGA	2 cut(s)	49, 867
TspRI	CASTG	2 cut(s)	937, 1026
XapI	RAATTY	1 cut(s)	799
XhoI	CTCGAG	2 cut(s)	80, 311
XmiI	GTMKAC	1 cut(s)	222
XspI	CTAG	2 cut(s)	737, 779
ZrmI	AGTACT	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.