Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000868

Physical Location & Seq

Genomic Coordinates Forward (+)

32777055 .. 32782172

Gene Structure 5118 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0308500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1635 bp

ATGCCAATTATTTCTGCATCATTTCAAGTACCGCAAGTTGCAAAGCCTGAAATTGTTCGCCGGACGGCAAATTTTCCACCAAGCATATGGGGAGATCGCTTCATCAACTATGATTCCCAACACACTAAGACTGATGCCATTTGGCAGCAACAGGTTGAAAAGCTGAAAACAGTAGTGAAGAGGGAAGTTTTTACTAATGAAGGTGATTTTTCACATCGACTGAAGTTCATTGATGCAATACAACGACTTGGCGTGGCATACCAATTTGAACATGAAATAGAAGAATCACTACAACATATCCATGCTAAATATCATCATGATCAGTACCGTGATGACAACCATCTTTACAATGCTGCGCTATGTTTTCAGCTTTTAAGGCAACATGGATATCATATTTCATCTGATATCTTCAACAAGTTCAAAGATTCAAATGGTAGCTTCAAAAAATGCTTAATTGCTGACCCCTGTGGTATGCTAAGCCTCTATGAGGCGACACATCTTAGGGTTAATGAAGAAGATATACTTGAAGAGGCTCTTCTGTTCACCACCGCTCAACTCGAGTCTGTGCTTAATAACAATGTAAGCTATCCAGCACTACTGACTGAACAAATAACTGAAGCTTTGAAGAGACCTCTTCGAAAAAGTCTAGAGAGATTATGTGCCAAGTGTTACATGTCAGTCTACCAAGATGAAGCCTCACACAGTGAATCTTTGTTGAAACTTGCAAAGTTGGATTTCAATCTTGTGCAATCTTTACACCAAAAGGAGCTCTGTGATGTTACAAGGTGGTGGAGAAAACTAGACTTCGAAAAGAAACTGCCATTTGCAAGAGATAGGGTGGTGGAGTTGTTCTTTTGGATAGTAGGAGTATATTTTGAACCTCAATACTCTACTGGCAGAATTATTATGACAAAAGTGGCTGTTCTTCTCATAGTTTTGGATGATATCTACGATGCATATGGTACATTTGAAGAACTCGTGATTTTTACCAAAGCAATTGACAGGTGGGATCTCAAATGCATAGATGAATTCCCGGATTATATGAAAATATTCTATTATGAACTTTTGAATCTTTTCAATGAAATTGACGAGATGAAAAATCAAGCCCGATCGTATTTCAACGAGGCTCAATGGTTACACGAAGGACGCATTCCGAGCATGGAAGAGTATATGCGCGTTGCAACCGTTTCGATCAGTTACACCTTTCTAACGACCATTTCATTACTTGGCATGGAAGATATTGTAACCAAGGAGGCATTTGAGTGGTTGATGAATGACCCTAAAATTCTTAGAGCTTCCAATACCATTTTTAGGCTCATGGATGACATTGTTTCCACCAAGTTTGAGAAAGTGAGAGGACATGCACCTTCTAGCATTGATTGCTACATGAAGCAATATGGAGTTTCAGAGCAAGAGACCGTTGACGTATTCAACAAAAAAGTTGCAGATTTGTGGAAGGATATAAATGAGGAGTTTCTTAGACCAACAGTTATGCCAACGCCGGTTCTTGTGCGTGTTCTCAATTTAACAAGAGTAACTGATCTCCTTTACAAAGGGGAAGATGGTTTCACACGGGTTGGGAAGATGACCAAAGATTGTGTTGCCGCGCTCCTTGTCGATCCAGTGCCACTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

544

Amino Acids

63.6

Weight (kDa)

5.56

Isoelectric Point (pI)

40.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Terpene_synth	PF01397	29 - 208	3.6e-55	Terpene synthase, N-terminal domain
Terpene_synth_C	PF03936	266 - 365	1.1e-42	Terpene synthase family, metal binding domain
Terpene_syn_C_2	PF19086	305 - 487	1.7e-48	Terpene synthase family 2, C-terminal metal binding
Terpene_synth_C	PF03936	364 - 487	3.9e-44	Terpene synthase family, metal binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000868)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	551
AccI	GTMKAC	1 cut(s)	681
AccII	CGCG	2 cut(s)	1176, 1607
AciI	CCGC	3 cut(s)	32, 549, 1605
AclWI	GGATC	2 cut(s)	1017, 1613
AcsI	RAATTY	3 cut(s)	70, 1028, 1284
AcuI	CTGAAG	2 cut(s)	242, 636
AdeI	CACNNNGTG	1 cut(s)	704
AfaI	GTAC	3 cut(s)	30, 326, 964
AfiI	CCNNNNNNNGG	2 cut(s)	487, 1311
AflIII	ACRYGT	1 cut(s)	672
AluBI	AGCT	7 cut(s)	163, 370, 438, 585, 620, 769, 1295
AluI	AGCT	7 cut(s)	163, 370, 438, 585, 620, 769, 1295
Alw21I	GWGCWC	1 cut(s)	771
Alw26I	GTCTC	2 cut(s)	622, 1409
AlwI	GGATC	2 cut(s)	1017, 1613
Ama87I	CYCGRG	1 cut(s)	557
ApeKI	GCWGC	2 cut(s)	145, 353
ApoI	RAATTY	3 cut(s)	70, 1028, 1284
Asp700I	GAANNNNTTC	3 cut(s)	54, 1049, 1073
AspLEI	GCGC	3 cut(s)	358, 1176, 1609
AsuC2I	CCSGG	1 cut(s)	1034
AsuHPI	GGTGA	2 cut(s)	215, 535
AsuII	TTCGAA	2 cut(s)	637, 807
AvaI	CYCGRG	1 cut(s)	557
BanII	GRGCYC	1 cut(s)	771
BarI	GAAGNNNNNNTAC	4 cut(s)	273, 305, 504, 536
BauI	CACGAG	1 cut(s)	977
Bbv12I	GWGCWC	1 cut(s)	771
BbvI	GCAGC	2 cut(s)	157, 340
BccI	CCATC	2 cut(s)	348, 1556
BceAI	ACGGC	1 cut(s)	81
BcgI	CGANNNNNNTGC	2 cut(s)	1170, 1204
BclI	TGATCA	1 cut(s)	319
BcnI	CCSGG	1 cut(s)	1034
BcoDI	GTCTC	2 cut(s)	622, 1409
BfaI	CTAG	3 cut(s)	647, 800, 1371
BisI	GCNGC	3 cut(s)	146, 354, 1605
BlpI	GCTNAGC	1 cut(s)	476
BlsI	GCNGC	3 cut(s)	147, 355, 1606
Bme1390I	CCNGG	1 cut(s)	1034
BmeT110I	CYCGRG	1 cut(s)	557
BmrFI	CCNGG	1 cut(s)	1034
BmsI	GCATC	4 cut(s)	26, 124, 223, 943
Bpu1102I	GCTNAGC	1 cut(s)	476
Bpu14I	TTCGAA	2 cut(s)	637, 807
BpuMI	CCSGG	1 cut(s)	1034
BsaBI	GATNNNNATC	1 cut(s)	738
BsaI	GGTCTC	2 cut(s)	622, 1409
BsaJI	CCNNGG	1 cut(s)	1248
Bsc4I	CCNNNNNNNGG	2 cut(s)	487, 1311
Bse118I	RCCGGY	1 cut(s)	1501
Bse1I	ACTGG	2 cut(s)	898, 1622
Bse8I	GATNNNNATC	1 cut(s)	738
BseDI	CCNNGG	1 cut(s)	1248
BseGI	GGATG	2 cut(s)	946, 1327
BseJI	GATNNNNATC	1 cut(s)	738
BseLI	CCNNNNNNNGG	2 cut(s)	487, 1311
BseNI	ACTGG	2 cut(s)	898, 1622
BseRI	GAGGAG	1 cut(s)	1484
BseXI	GCAGC	2 cut(s)	157, 340
Bsh1236I	CGCG	2 cut(s)	1176, 1607
Bsh1285I	CGRYCG	1 cut(s)	1112
BsiEI	CGRYCG	1 cut(s)	1112
BsiHKAI	GWGCWC	1 cut(s)	771
BsiHKCI	CYCGRG	1 cut(s)	557
BsiSI	CCGG	3 cut(s)	61, 1034, 1502
BslI	CCNNNNNNNGG	2 cut(s)	487, 1311
BsmAI	GTCTC	2 cut(s)	622, 1409
BsmI	GAATGC	1 cut(s)	1149
Bso31I	GGTCTC	2 cut(s)	622, 1409
BsoBI	CYCGRG	1 cut(s)	557
Bsp119I	TTCGAA	2 cut(s)	637, 807
Bsp1286I	GDGCHC	1 cut(s)	771
Bsp143I	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
Bsp1720I	GCTNAGC	1 cut(s)	476
BspACI	CCGC	3 cut(s)	32, 549, 1605
BspFNI	CGCG	2 cut(s)	1176, 1607
BspHI	TCATGA	1 cut(s)	316
BspPI	GGATC	2 cut(s)	1017, 1613
BspQI	GCTCTTC	1 cut(s)	540
BspT104I	TTCGAA	2 cut(s)	637, 807
BspTNI	GGTCTC	2 cut(s)	622, 1409
BsrBI	CCGCTC	1 cut(s)	551
BsrFI	RCCGGY	1 cut(s)	1501
BsrI	ACTGG	2 cut(s)	898, 1622
BssAI	RCCGGY	1 cut(s)	1501
BssECI	CCNNGG	1 cut(s)	1248
BssMI	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
BssSI	CACGAG	1 cut(s)	977
BssT1I	CCWWGG	1 cut(s)	1248
Bst2BI	CACGAG	1 cut(s)	977
Bst4CI	ACNGT	7 cut(s)	172, 329, 704, 1186, 1420, 1489, 1632
Bst6I	CTCTTC	6 cut(s)	173, 522, 540, 620, 639, 1158
BstAPI	GCANNNNNTGC	1 cut(s)	1380
BstBI	TTCGAA	2 cut(s)	637, 807
BstDEI	CTNAG	5 cut(s)	126, 476, 500, 1289, 1478
BstENI	CCTNNNNNAGG	1 cut(s)	485
BstF5I	GGATG	2 cut(s)	946, 1327
BstFNI	CGCG	2 cut(s)	1176, 1607
BstHHI	GCGC	3 cut(s)	358, 1176, 1609
BstKTI	GATC	7 cut(s)	97, 322, 1012, 1112, 1194, 1543, 1621
BstMAI	GTCTC	2 cut(s)	622, 1409
BstMBI	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
BstMCI	CGRYCG	1 cut(s)	1112
BstMWI	GCNNNNNNNGC	3 cut(s)	376, 1155, 1380
BstNSI	RCATGY	2 cut(s)	676, 1364
BstSCI	CCNGG	1 cut(s)	1032
BstUI	CGCG	2 cut(s)	1176, 1607
BstV1I	GCAGC	2 cut(s)	157, 340
BstX2I	RGATCY	1 cut(s)	1009
BstXI	CCANNNNNNTGG	1 cut(s)	87
BstYI	RGATCY	1 cut(s)	1009
BtsCI	GGATG	2 cut(s)	946, 1327
BtsIMutI	CAGTG	3 cut(s)	709, 1628, 1629
CciI	TCATGA	1 cut(s)	316
CfoI	GCGC	3 cut(s)	358, 1176, 1609
Cfr10I	RCCGGY	1 cut(s)	1501
CseI	GACGC	1 cut(s)	1155
Csp6I	GTAC	3 cut(s)	29, 325, 963
CspCI	CAANNNNNGTGG	2 cut(s)	1324, 1359
CviQI	GTAC	3 cut(s)	29, 325, 963
DdeI	CTNAG	5 cut(s)	126, 476, 500, 1289, 1478
DpnI	GATC	7 cut(s)	96, 321, 1011, 1111, 1193, 1542, 1620
DpnII	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
DraIII	CACNNNGTG	1 cut(s)	704
Eam1104I	CTCTTC	6 cut(s)	173, 522, 540, 620, 639, 1158
EarI	CTCTTC	6 cut(s)	173, 522, 540, 620, 639, 1158
Ecl136II	GAGCTC	1 cut(s)	769
Eco130I	CCWWGG	1 cut(s)	1248
Eco24I	GRGCYC	1 cut(s)	771
Eco31I	GGTCTC	2 cut(s)	622, 1409
Eco32I	GATATC	3 cut(s)	389, 406, 946
Eco53kI	GAGCTC	1 cut(s)	769
Eco57I	CTGAAG	2 cut(s)	242, 636
Eco88I	CYCGRG	1 cut(s)	557
EcoICRI	GAGCTC	1 cut(s)	769
EcoNI	CCTNNNNNAGG	1 cut(s)	485
EcoRI	GAATTC	1 cut(s)	1028
EcoRV	GATATC	3 cut(s)	389, 406, 946
EcoT14I	CCWWGG	1 cut(s)	1248
EcoT22I	ATGCAT	2 cut(s)	958, 1022
EcoT38I	GRGCYC	1 cut(s)	771
ErhI	CCWWGG	1 cut(s)	1248
FalI	AAGNNNNNCTT	4 cut(s)	507, 539, 519, 551
FauNDI	CATATG	2 cut(s)	86, 958
FbaI	TGATCA	1 cut(s)	319
FblI	GTMKAC	1 cut(s)	681
Fnu4HI	GCNGC	3 cut(s)	146, 354, 1605
FokI	GGATG	2 cut(s)	953, 1334
FriOI	GRGCYC	1 cut(s)	771
Fsp4HI	GCNGC	3 cut(s)	146, 354, 1605
FspBI	CTAG	3 cut(s)	647, 800, 1371
GlaI	GCGC	3 cut(s)	357, 1175, 1608
GluI	GCNGC	3 cut(s)	146, 354, 1605
HapII	CCGG	3 cut(s)	61, 1034, 1502
HgaI	GACGC	1 cut(s)	1155
HhaI	GCGC	3 cut(s)	358, 1176, 1609
Hin6I	GCGC	3 cut(s)	356, 1174, 1607
HinP1I	GCGC	3 cut(s)	356, 1174, 1607
HincII	GTYRAC	1 cut(s)	1423
HindII	GTYRAC	1 cut(s)	1423
HindIII	AAGCTT	1 cut(s)	618
HinfI	GANTC	6 cut(s)	113, 284, 425, 560, 707, 1069
HpaII	CCGG	3 cut(s)	61, 1034, 1502
HphI	GGTGA	2 cut(s)	215, 535
Hpy166II	GTNNAC	3 cut(s)	543, 682, 1423
Hpy188I	TCNGA	3 cut(s)	403, 1155, 1408
Hpy188III	TCNNGA	3 cut(s)	317, 647, 979
Hpy8I	GTNNAC	3 cut(s)	543, 682, 1423
HpyAV	CCTTC	4 cut(s)	194, 1136, 1377, 1450
HpyCH4III	ACNGT	7 cut(s)	172, 329, 704, 1186, 1420, 1489, 1632
HpyCH4IV	ACGT	1 cut(s)	1425
HpyF10VI	GCNNNNNNNGC	3 cut(s)	376, 1155, 1380
HpyF3I	CTNAG	5 cut(s)	126, 476, 500, 1289, 1478
HpySE526I	ACGT	1 cut(s)	1425
HspAI	GCGC	3 cut(s)	356, 1174, 1607
Ksp22I	TGATCA	1 cut(s)	319
Kzo9I	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
LguI	GCTCTTC	1 cut(s)	540
LmnI	GCTCC	2 cut(s)	766, 1614
LpnPI	CCDG	9 cut(s)	60, 74, 137, 478, 603, 879, 988, 1047, 1515
Lsp1109I	GCAGC	2 cut(s)	157, 340
LweI	GCATC	4 cut(s)	26, 124, 223, 943
MaeI	CTAG	3 cut(s)	647, 800, 1371
MaeII	ACGT	1 cut(s)	1425
MaeIII	GTNAC	6 cut(s)	668, 778, 1134, 1196, 1243, 1534
MalI	GATC	7 cut(s)	96, 321, 1011, 1111, 1193, 1542, 1620
MbiI	CCGCTC	1 cut(s)	551
MboI	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	1 cut(s)	1009
MhlI	GDGCHC	1 cut(s)	771
MlyI	GAGTC	1 cut(s)	569
MmeI	TCCRAC	1 cut(s)	711
Mph1103I	ATGCAT	2 cut(s)	958, 1022
MroXI	GAANNNNTTC	3 cut(s)	54, 1049, 1073
MseI	TTAA	5 cut(s)	374, 452, 507, 570, 1526
MslI	CAYNNNNRTG	2 cut(s)	300, 1261
MspI	CCGG	3 cut(s)	61, 1034, 1502
MspR9I	CCNGG	1 cut(s)	1034
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	1 cut(s)	1149
MvnI	CGCG	2 cut(s)	1176, 1607
MwoI	GCNNNNNNNGC	3 cut(s)	376, 1155, 1380
NciI	CCSGG	1 cut(s)	1034
NdeI	CATATG	2 cut(s)	86, 958
NdeII	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
NsiI	ATGCAT	2 cut(s)	958, 1022
NspI	RCATGY	2 cut(s)	676, 1364
NspV	TTCGAA	2 cut(s)	637, 807
PaeR7I	CTCGAG	1 cut(s)	557
PagI	TCATGA	1 cut(s)	316
PciI	ACATGT	1 cut(s)	672
PciSI	GCTCTTC	1 cut(s)	540
PctI	GAATGC	1 cut(s)	1149
PdmI	GAANNNNTTC	3 cut(s)	54, 1049, 1073
PfeI	GAWTC	5 cut(s)	113, 284, 425, 707, 1069
PfoI	TCCNGGA	1 cut(s)	1032
PkrI	GCNGC	3 cut(s)	147, 355, 1606
Ple19I	CGATCG	1 cut(s)	1112
PleI	GAGTC	1 cut(s)	568
PpsI	GAGTC	1 cut(s)	568
PscI	ACATGT	1 cut(s)	672
Psp124BI	GAGCTC	1 cut(s)	771
PspXI	VCTCGAGB	1 cut(s)	557
PsuI	RGATCY	1 cut(s)	1009
PvuI	CGATCG	1 cut(s)	1112
RsaI	GTAC	3 cut(s)	30, 326, 964
RsaNI	GTAC	3 cut(s)	29, 325, 963
RseI	CAYNNNNRTG	2 cut(s)	300, 1261
SacI	GAGCTC	1 cut(s)	771
SapI	GCTCTTC	1 cut(s)	540
SaqAI	TTAA	5 cut(s)	374, 452, 507, 570, 1526
SatI	GCNGC	3 cut(s)	146, 354, 1605
Sau3AI	GATC	7 cut(s)	94, 319, 1009, 1109, 1191, 1540, 1618
SchI	GAGTC	1 cut(s)	569
ScrFI	CCNGG	1 cut(s)	1034
SduI	GDGCHC	1 cut(s)	771
SfaNI	GCATC	4 cut(s)	26, 124, 223, 943
Sfr274I	CTCGAG	1 cut(s)	557
SfuI	TTCGAA	2 cut(s)	637, 807
SlaI	CTCGAG	1 cut(s)	557
SmiMI	CAYNNNNRTG	2 cut(s)	300, 1261
SmlI	CTYRAG	1 cut(s)	557
SmoI	CTYRAG	1 cut(s)	557
SsiI	CCGC	3 cut(s)	32, 549, 1605
SspI	AATATT	1 cut(s)	1050
SspMI	CTAG	3 cut(s)	647, 800, 1371
SstI	GAGCTC	1 cut(s)	771
StyD4I	CCNGG	1 cut(s)	1032
StyI	CCWWGG	1 cut(s)	1248
TaaI	ACNGT	7 cut(s)	172, 329, 704, 1186, 1420, 1489, 1632
TaiI	ACGT	1 cut(s)	1428
TaqI	TCGA	6 cut(s)	217, 558, 637, 807, 1190, 1617
TauI	GCSGC	1 cut(s)	1607
TfiI	GAWTC	5 cut(s)	113, 284, 425, 707, 1069
Tru1I	TTAA	5 cut(s)	374, 452, 507, 570, 1526
Tru9I	TTAA	5 cut(s)	374, 452, 507, 570, 1526
TscAI	CASTG	3 cut(s)	709, 1629, 1635
TseI	GCWGC	2 cut(s)	145, 353
TspRI	CASTG	3 cut(s)	709, 1629, 1635
XagI	CCTNNNNNAGG	1 cut(s)	485
XapI	RAATTY	3 cut(s)	70, 1028, 1284
XbaI	TCTAGA	1 cut(s)	646
XceI	RCATGY	2 cut(s)	676, 1364
XcmI	CCANNNNNNNNNTGG	1 cut(s)	84
XhoI	CTCGAG	1 cut(s)	557
XmiI	GTMKAC	1 cut(s)	681
XmnI	GAANNNNTTC	3 cut(s)	54, 1049, 1073
XspI	CTAG	3 cut(s)	647, 800, 1371
Zsp2I	ATGCAT	2 cut(s)	958, 1022

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.