Homeodomain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2354 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2197 |
| Acc36I | ACCTGC | 2 cut(s) | 1058, 2354 |
| AccI | GTMKAC | 3 cut(s) | 777, 793, 2939 |
| AccII | CGCG | 1 cut(s) | 2925 |
| AciI | CCGC | 5 cut(s) | 531, 1023, 1222, 1407, 2677 |
| AclWI | GGATC | 7 cut(s) | 77, 348, 774, 1697, 1999, 2400, 2805 |
| AcoI | YGGCCR | 1 cut(s) | 933 |
| AcuI | CTGAAG | 4 cut(s) | 566, 1411, 2207, 2786 |
| AcvI | CACGTG | 1 cut(s) | 2753 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1566, 2683 |
| AflIII | ACRYGT | 1 cut(s) | 2752 |
| AjnI | CCWGG | 7 cut(s) | 985, 1506, 1564, 1616, 2030, 2329, 3005 |
| AleI | CACNNNNGTG | 1 cut(s) | 1133 |
| Alw21I | GWGCWC | 4 cut(s) | 379, 890, 1588, 2916 |
| Alw26I | GTCTC | 6 cut(s) | 139, 450, 1209, 1810, 2351, 2839 |
| Alw44I | GTGCAC | 1 cut(s) | 2912 |
| AlwI | GGATC | 7 cut(s) | 77, 348, 774, 1697, 1999, 2400, 2805 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 589, 2369 |
| Ama87I | CYCGRG | 2 cut(s) | 440, 1939 |
| AoxI | GGCC | 3 cut(s) | 474, 906, 933 |
| ApaLI | GTGCAC | 1 cut(s) | 2912 |
| ApeKI | GCWGC | 5 cut(s) | 152, 502, 1187, 1418, 2447 |
| AseI | ATTAAT | 1 cut(s) | 2175 |
| AspLEI | GCGC | 2 cut(s) | 1495, 2927 |
| AspS9I | GGNCC | 5 cut(s) | 61, 474, 1504, 1742, 1873 |
| AsuHPI | GGTGA | 5 cut(s) | 241, 1337, 1589, 1781, 2259 |
| AsuII | TTCGAA | 1 cut(s) | 1835 |
| AvaI | CYCGRG | 2 cut(s) | 440, 1939 |
| AvaII | GGWCC | 4 cut(s) | 61, 1504, 1742, 1873 |
| BaeGI | GKGCMC | 2 cut(s) | 2916, 2923 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 1284, 1317, 1647, 1680 |
| BanII | GRGCYC | 1 cut(s) | 2785 |
| BarI | GAAGNNNNNNTAC | 1 cut(s) | 28 |
| BauI | CACGAG | 1 cut(s) | 1296 |
| BbrPI | CACGTG | 1 cut(s) | 2753 |
| BbsI | GAAGAC | 4 cut(s) | 307, 755, 1866, 2195 |
| Bbv12I | GWGCWC | 4 cut(s) | 379, 890, 1588, 2916 |
| BbvI | GCAGC | 5 cut(s) | 164, 514, 1199, 1430, 2434 |
| BccI | CCATC | 6 cut(s) | 761, 1168, 1172, 1574, 1609, 1772 |
| BceAI | ACGGC | 3 cut(s) | 320, 534, 801 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 773, 807 |
| BciT130I | CCWGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| BclI | TGATCA | 2 cut(s) | 2811, 2964 |
| BcoDI | GTCTC | 6 cut(s) | 139, 450, 1209, 1810, 2351, 2839 |
| BfaI | CTAG | 7 cut(s) | 336, 605, 863, 1170, 1644, 2600, 3020 |
| BfmI | CTRYAG | 4 cut(s) | 469, 500, 802, 2451 |
| BfuAI | ACCTGC | 2 cut(s) | 1058, 2354 |
| BglII | AGATCT | 2 cut(s) | 1369, 2494 |
| BisI | GCNGC | 5 cut(s) | 153, 503, 1188, 1419, 2448 |
| BlpI | GCTNAGC | 1 cut(s) | 2130 |
| BlsI | GCNGC | 5 cut(s) | 154, 504, 1189, 1420, 2449 |
| BmcAI | AGTACT | 2 cut(s) | 486, 3018 |
| Bme1390I | CCNGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| Bme18I | GGWCC | 4 cut(s) | 61, 1504, 1742, 1873 |
| BmeT110I | CYCGRG | 2 cut(s) | 440, 1939 |
| BmgT120I | GGNCC | 5 cut(s) | 61, 474, 1504, 1742, 1873 |
| BmiI | GGNNCC | 2 cut(s) | 393, 1744 |
| BmrFI | CCNGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| BmrI | ACTGGG | 2 cut(s) | 1908, 2926 |
| BmsI | GCATC | 7 cut(s) | 228, 316, 643, 1219, 1291, 1813, 2473 |
| BmuI | ACTGGG | 2 cut(s) | 1908, 2926 |
| BpiI | GAAGAC | 4 cut(s) | 307, 755, 1866, 2195 |
| BpmI | CTGGAG | 2 cut(s) | 1989, 2405 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2130 |
| Bpu14I | TTCGAA | 1 cut(s) | 1835 |
| BpuEI | CTTGAG | 1 cut(s) | 2333 |
| BsaAI | YACGTR | 1 cut(s) | 2753 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1827 |
| BsaI | GGTCTC | 3 cut(s) | 1209, 1810, 2351 |
| BsaJI | CCNNGG | 5 cut(s) | 550, 1208, 1565, 1617, 2409 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 546, 576 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1566, 2683 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1827 |
| BseBI | CCWGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| BseDI | CCNNGG | 5 cut(s) | 550, 1208, 1565, 1617, 2409 |
| BseGI | GGATG | 6 cut(s) | 243, 925, 1179, 1183, 2235, 2488 |
| BseJI | GATNNNNATC | 1 cut(s) | 1827 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1566, 2683 |
| BseMII | CTCAG | 8 cut(s) | 396, 483, 534, 681, 741, 1364, 2144, 2925 |
| BseRI | GAGGAG | 2 cut(s) | 644, 2525 |
| BseSI | GKGCMC | 2 cut(s) | 2916, 2923 |
| BseX3I | CGGCCG | 1 cut(s) | 933 |
| BseXI | GCAGC | 5 cut(s) | 164, 514, 1199, 1430, 2434 |
| BseYI | CCCAGC | 2 cut(s) | 568, 1391 |
| BsgI | GTGCAG | 2 cut(s) | 1206, 2382 |
| Bsh1236I | CGCG | 1 cut(s) | 2925 |
| Bsh1285I | CGRYCG | 1 cut(s) | 936 |
| BshFI | GGCC | 3 cut(s) | 476, 908, 935 |
| BsiEI | CGRYCG | 1 cut(s) | 936 |
| BsiHKAI | GWGCWC | 4 cut(s) | 379, 890, 1588, 2916 |
| BsiHKCI | CYCGRG | 2 cut(s) | 440, 1939 |
| BsiWI | CGTACG | 1 cut(s) | 56 |
| BslFI | GGGAC | 4 cut(s) | 54, 585, 686, 1728 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1566, 2683 |
| BsmAI | GTCTC | 6 cut(s) | 139, 450, 1209, 1810, 2351, 2839 |
| BsmFI | GGGAC | 4 cut(s) | 54, 585, 686, 1728 |
| BsmI | GAATGC | 2 cut(s) | 1341, 1969 |
| BsnI | GGCC | 3 cut(s) | 476, 908, 935 |
| Bso31I | GGTCTC | 3 cut(s) | 1209, 1810, 2351 |
| BsoBI | CYCGRG | 2 cut(s) | 440, 1939 |
| Bsp119I | TTCGAA | 1 cut(s) | 1835 |
| Bsp1286I | GDGCHC | 6 cut(s) | 379, 890, 1588, 2785, 2916, 2923 |
| Bsp1407I | TGTACA | 1 cut(s) | 1139 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2130 |
| BspACI | CCGC | 5 cut(s) | 531, 1023, 1222, 1407, 2677 |
| BspANI | GGCC | 3 cut(s) | 476, 908, 935 |
| BspCNI | CTCAG | 8 cut(s) | 397, 484, 533, 682, 740, 1365, 2143, 2926 |
| BspFNI | CGCG | 1 cut(s) | 2925 |
| BspHI | TCATGA | 3 cut(s) | 217, 895, 1150 |
| BspLI | GGNNCC | 2 cut(s) | 393, 1744 |
| BspMAI | CTGCAG | 2 cut(s) | 473, 504 |
| BspMI | ACCTGC | 2 cut(s) | 1058, 2354 |
| BspPI | GGATC | 7 cut(s) | 77, 348, 774, 1697, 1999, 2400, 2805 |
| BspQI | GCTCTTC | 1 cut(s) | 384 |
| BspT104I | TTCGAA | 1 cut(s) | 1835 |
| BspTNI | GGTCTC | 3 cut(s) | 1209, 1810, 2351 |
| BsrGI | TGTACA | 1 cut(s) | 1139 |
| BssECI | CCNNGG | 5 cut(s) | 550, 1208, 1565, 1617, 2409 |
| BssNAI | GTATAC | 1 cut(s) | 2940 |
| BssSI | CACGAG | 1 cut(s) | 1296 |
| BssT1I | CCWWGG | 2 cut(s) | 1208, 2409 |
| Bst1107I | GTATAC | 1 cut(s) | 2940 |
| Bst2BI | CACGAG | 1 cut(s) | 1296 |
| Bst2UI | CCWGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| Bst4CI | ACNGT | 5 cut(s) | 61, 489, 646, 806, 1546 |
| Bst6I | CTCTTC | 6 cut(s) | 384, 585, 1108, 1664, 1735, 2990 |
| BstAUI | TGTACA | 1 cut(s) | 1139 |
| BstBAI | YACGTR | 1 cut(s) | 2753 |
| BstBI | TTCGAA | 1 cut(s) | 1835 |
| BstC8I | GCNNGC | 5 cut(s) | 132, 1023, 1339, 2661, 2923 |
| BstDSI | CCRYGG | 1 cut(s) | 550 |
| BstF5I | GGATG | 6 cut(s) | 243, 925, 1179, 1183, 2235, 2488 |
| BstFNI | CGCG | 1 cut(s) | 2925 |
| BstHHI | GCGC | 2 cut(s) | 1495, 2927 |
| BstMAI | GTCTC | 6 cut(s) | 139, 450, 1209, 1810, 2351, 2839 |
| BstMCI | CGRYCG | 1 cut(s) | 936 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1397, 2857 |
| BstNI | CCWGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| BstNSI | RCATGY | 2 cut(s) | 784, 2282 |
| BstSCI | CCNGG | 7 cut(s) | 985, 1506, 1564, 1616, 2030, 2329, 3005 |
| BstSFI | CTRYAG | 4 cut(s) | 469, 500, 802, 2451 |
| BstSLI | GKGCMC | 2 cut(s) | 2916, 2923 |
| BstUI | CGCG | 1 cut(s) | 2925 |
| BstV1I | GCAGC | 5 cut(s) | 164, 514, 1199, 1430, 2434 |
| BstV2I | GAAGAC | 4 cut(s) | 307, 755, 1866, 2195 |
| BstX2I | RGATCY | 5 cut(s) | 340, 1369, 2405, 2494, 2797 |
| BstYI | RGATCY | 5 cut(s) | 340, 1369, 2405, 2494, 2797 |
| BstZ17I | GTATAC | 1 cut(s) | 2940 |
| BstZI | CGGCCG | 1 cut(s) | 933 |
| BsuRI | GGCC | 3 cut(s) | 476, 908, 935 |
| BtgI | CCRYGG | 1 cut(s) | 550 |
| BtsCI | GGATG | 6 cut(s) | 243, 925, 1179, 1183, 2235, 2488 |
| BtsI | GCAGTG | 3 cut(s) | 851, 1189, 1233 |
| BtsIMutI | CAGTG | 7 cut(s) | 811, 851, 1189, 1233, 1957, 2231, 2914 |
| BveI | ACCTGC | 2 cut(s) | 1058, 2354 |
| Cac8I | GCNNGC | 5 cut(s) | 132, 1023, 1339, 2661, 2923 |
| CaiI | CAGNNNCTG | 2 cut(s) | 589, 2369 |
| CciI | TCATGA | 3 cut(s) | 217, 895, 1150 |
| CfoI | GCGC | 2 cut(s) | 1495, 2927 |
| Cfr13I | GGNCC | 5 cut(s) | 61, 474, 1504, 1742, 1873 |
| CseI | GACGC | 2 cut(s) | 1179, 1275 |
| CsiI | ACCWGGT | 1 cut(s) | 3005 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1222, 1257, 1654, 1689, 2131, 2166 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2197 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2197 |
| EaeI | YGGCCR | 1 cut(s) | 933 |
| EagI | CGGCCG | 1 cut(s) | 933 |
| Eam1104I | CTCTTC | 6 cut(s) | 384, 585, 1108, 1664, 1735, 2990 |
| EarI | CTCTTC | 6 cut(s) | 384, 585, 1108, 1664, 1735, 2990 |
| EclXI | CGGCCG | 1 cut(s) | 933 |
| Eco130I | CCWWGG | 2 cut(s) | 1208, 2409 |
| Eco24I | GRGCYC | 1 cut(s) | 2785 |
| Eco31I | GGTCTC | 3 cut(s) | 1209, 1810, 2351 |
| Eco32I | GATATC | 1 cut(s) | 2287 |
| Eco47I | GGWCC | 4 cut(s) | 61, 1504, 1742, 1873 |
| Eco52I | CGGCCG | 1 cut(s) | 933 |
| Eco57I | CTGAAG | 4 cut(s) | 566, 1411, 2207, 2786 |
| Eco72I | CACGTG | 1 cut(s) | 2753 |
| Eco88I | CYCGRG | 2 cut(s) | 440, 1939 |
| EcoO109I | RGGNCCY | 3 cut(s) | 474, 1742, 1873 |
| EcoRI | GAATTC | 1 cut(s) | 2263 |
| EcoRII | CCWGG | 7 cut(s) | 985, 1506, 1564, 1616, 2030, 2329, 3005 |
| EcoRV | GATATC | 1 cut(s) | 2287 |
| EcoT14I | CCWWGG | 2 cut(s) | 1208, 2409 |
| EcoT22I | ATGCAT | 2 cut(s) | 243, 421 |
| EcoT38I | GRGCYC | 1 cut(s) | 2785 |
| ErhI | CCWWGG | 2 cut(s) | 1208, 2409 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1936, 1968 |
| FaqI | GGGAC | 4 cut(s) | 54, 585, 686, 1728 |
| FauI | CCCGC | 1 cut(s) | 1030 |
| FbaI | TGATCA | 2 cut(s) | 2811, 2964 |
| FblI | GTMKAC | 3 cut(s) | 777, 793, 2939 |
| Fnu4HI | GCNGC | 5 cut(s) | 153, 503, 1188, 1419, 2448 |
| FokI | GGATG | 6 cut(s) | 250, 932, 1186, 1190, 2242, 2495 |
| FriOI | GRGCYC | 1 cut(s) | 2785 |
| Fsp4HI | GCNGC | 5 cut(s) | 153, 503, 1188, 1419, 2448 |
| FspBI | CTAG | 7 cut(s) | 336, 605, 863, 1170, 1644, 2600, 3020 |
| GlaI | GCGC | 2 cut(s) | 1494, 2926 |
| GluI | GCNGC | 5 cut(s) | 153, 503, 1188, 1419, 2448 |
| GsaI | CCCAGC | 2 cut(s) | 572, 1395 |
| GsuI | CTGGAG | 2 cut(s) | 1989, 2405 |
| HaeIII | GGCC | 3 cut(s) | 476, 908, 935 |
| HgaI | GACGC | 2 cut(s) | 1179, 1275 |
| HhaI | GCGC | 2 cut(s) | 1495, 2927 |
| Hin6I | GCGC | 2 cut(s) | 1493, 2925 |
| HinP1I | GCGC | 2 cut(s) | 1493, 2925 |
| HincII | GTYRAC | 3 cut(s) | 794, 1194, 1907 |
| HindII | GTYRAC | 3 cut(s) | 794, 1194, 1907 |
| HinfI | GANTC | 8 cut(s) | 52, 443, 593, 868, 929, 1088, 2299, 2673 |
| HphI | GGTGA | 5 cut(s) | 241, 1337, 1589, 1781, 2259 |
| Hpy166II | GTNNAC | 8 cut(s) | 778, 794, 1140, 1194, 1907, 2766, 2914, 2940 |
| Hpy8I | GTNNAC | 8 cut(s) | 778, 794, 1140, 1194, 1907, 2766, 2914, 2940 |
| HpyCH4III | ACNGT | 5 cut(s) | 61, 489, 646, 806, 1546 |
| HpyCH4IV | ACGT | 3 cut(s) | 373, 1010, 2752 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1397, 2857 |
| HpySE526I | ACGT | 3 cut(s) | 373, 1010, 2752 |
| HspAI | GCGC | 2 cut(s) | 1493, 2925 |
| Ksp22I | TGATCA | 2 cut(s) | 2811, 2964 |
| LguI | GCTCTTC | 1 cut(s) | 384 |
| LmnI | GCTCC | 3 cut(s) | 103, 1583, 2538 |
| Lsp1109I | GCAGC | 5 cut(s) | 164, 514, 1199, 1430, 2434 |
| LweI | GCATC | 7 cut(s) | 228, 316, 643, 1219, 1291, 1813, 2473 |
| MabI | ACCWGGT | 1 cut(s) | 3005 |
| MaeI | CTAG | 7 cut(s) | 336, 605, 863, 1170, 1644, 2600, 3020 |
| MaeII | ACGT | 3 cut(s) | 373, 1010, 2752 |
| MaeIII | GTNAC | 4 cut(s) | 968, 1457, 1796, 2219 |
| MflI | RGATCY | 5 cut(s) | 340, 1369, 2405, 2494, 2797 |
| MhlI | GDGCHC | 6 cut(s) | 379, 890, 1588, 2785, 2916, 2923 |
| MlyI | GAGTC | 3 cut(s) | 46, 452, 2308 |
| MmeI | TCCRAC | 2 cut(s) | 2972, 2991 |
| Mph1103I | ATGCAT | 2 cut(s) | 243, 421 |
| MslI | CAYNNNNRTG | 5 cut(s) | 290, 1133, 1836, 1962, 2294 |
| MspA1I | CMGCKG | 2 cut(s) | 916, 1421 |
| MspR9I | CCNGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| Mva1269I | GAATGC | 2 cut(s) | 1341, 1969 |
| MvaI | CCWGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| MvnI | CGCG | 1 cut(s) | 2925 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1397, 2857 |
| NlaIV | GGNNCC | 2 cut(s) | 393, 1744 |
| NmeAIII | GCCGAG | 1 cut(s) | 961 |
| NmuCI | GTSAC | 3 cut(s) | 968, 1796, 2219 |
| NsiI | ATGCAT | 2 cut(s) | 243, 421 |
| NspI | RCATGY | 2 cut(s) | 784, 2282 |
| NspV | TTCGAA | 1 cut(s) | 1835 |
| OliI | CACNNNNGTG | 1 cut(s) | 1133 |
| PaeR7I | CTCGAG | 1 cut(s) | 440 |
| PagI | TCATGA | 3 cut(s) | 217, 895, 1150 |
| PaqCI | CACCTGC | 1 cut(s) | 2354 |
| PciSI | GCTCTTC | 1 cut(s) | 384 |
| PctI | GAATGC | 2 cut(s) | 1341, 1969 |
| PfeI | GAWTC | 5 cut(s) | 593, 868, 929, 1088, 2673 |
| Pfl23II | CGTACG | 1 cut(s) | 56 |
| PflFI | GACNNNGTC | 1 cut(s) | 1802 |
| PfoI | TCCNGGA | 2 cut(s) | 985, 1506 |
| PkrI | GCNGC | 5 cut(s) | 154, 504, 1189, 1420, 2449 |
| PleI | GAGTC | 3 cut(s) | 46, 451, 2307 |
| PmaCI | CACGTG | 1 cut(s) | 2753 |
| PmlI | CACGTG | 1 cut(s) | 2753 |
| PpsI | GAGTC | 3 cut(s) | 46, 451, 2307 |
| Ppu21I | YACGTR | 1 cut(s) | 2753 |
| PpuMI | RGGWCCY | 2 cut(s) | 1742, 1873 |
| PshBI | ATTAAT | 1 cut(s) | 2175 |
| Psp5II | RGGWCCY | 2 cut(s) | 1742, 1873 |
| Psp6I | CCWGG | 7 cut(s) | 985, 1506, 1564, 1616, 2030, 2329, 3005 |
| PspCI | CACGTG | 1 cut(s) | 2753 |
| PspFI | CCCAGC | 2 cut(s) | 568, 1391 |
| PspGI | CCWGG | 7 cut(s) | 985, 1506, 1564, 1616, 2030, 2329, 3005 |
| PspLI | CGTACG | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 2 cut(s) | 393, 1744 |
| PspPI | GGNCC | 5 cut(s) | 61, 474, 1504, 1742, 1873 |
| PspPPI | RGGWCCY | 2 cut(s) | 1742, 1873 |
| PspXI | VCTCGAGB | 1 cut(s) | 440 |
| PstI | CTGCAG | 2 cut(s) | 473, 504 |
| PstNI | CAGNNNCTG | 2 cut(s) | 589, 2369 |
| PsuI | RGATCY | 5 cut(s) | 340, 1369, 2405, 2494, 2797 |
| PsyI | GACNNNGTC | 1 cut(s) | 1802 |
| PvuII | CAGCTG | 2 cut(s) | 916, 1421 |
| RseI | CAYNNNNRTG | 5 cut(s) | 290, 1133, 1836, 1962, 2294 |
| SalI | GTCGAC | 1 cut(s) | 792 |
| SapI | GCTCTTC | 1 cut(s) | 384 |
| SatI | GCNGC | 5 cut(s) | 153, 503, 1188, 1419, 2448 |
| Sau96I | GGNCC | 5 cut(s) | 61, 474, 1504, 1742, 1873 |
| ScaI | AGTACT | 2 cut(s) | 486, 3018 |
| SchI | GAGTC | 3 cut(s) | 46, 452, 2308 |
| ScrFI | CCNGG | 7 cut(s) | 987, 1508, 1566, 1618, 2032, 2331, 3007 |
| SduI | GDGCHC | 6 cut(s) | 379, 890, 1588, 2785, 2916, 2923 |
| SexAI | ACCWGGT | 1 cut(s) | 3005 |
| SfaNI | GCATC | 7 cut(s) | 228, 316, 643, 1219, 1291, 1813, 2473 |
| SfcI | CTRYAG | 4 cut(s) | 469, 500, 802, 2451 |
| Sfr274I | CTCGAG | 1 cut(s) | 440 |
| SfuI | TTCGAA | 1 cut(s) | 1835 |
| SinI | GGWCC | 4 cut(s) | 61, 1504, 1742, 1873 |
| SlaI | CTCGAG | 1 cut(s) | 440 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 290, 1133, 1836, 1962, 2294 |
| SmlI | CTYRAG | 2 cut(s) | 440, 2348 |
| SmoI | CTYRAG | 2 cut(s) | 440, 2348 |
| SsiI | CCGC | 5 cut(s) | 531, 1023, 1222, 1407, 2677 |
| SspI | AATATT | 1 cut(s) | 2397 |
| SspMI | CTAG | 7 cut(s) | 336, 605, 863, 1170, 1644, 2600, 3020 |
| StyD4I | CCNGG | 7 cut(s) | 985, 1506, 1564, 1616, 2030, 2329, 3005 |
| StyI | CCWWGG | 2 cut(s) | 1208, 2409 |
| TaaI | ACNGT | 5 cut(s) | 61, 489, 646, 806, 1546 |
| TaiI | ACGT | 3 cut(s) | 376, 1013, 2755 |
| TaqI | TCGA | 7 cut(s) | 320, 441, 793, 1835, 1918, 2392, 3030 |
| TatI | WGTACW | 6 cut(s) | 484, 535, 1139, 2309, 2765, 3016 |
| TfiI | GAWTC | 5 cut(s) | 593, 868, 929, 1088, 2673 |
| TscAI | CASTG | 7 cut(s) | 811, 851, 1189, 1240, 1964, 2231, 2921 |
| TseFI | GTSAC | 3 cut(s) | 968, 1796, 2219 |
| TseI | GCWGC | 5 cut(s) | 152, 502, 1187, 1418, 2447 |
| Tsp45I | GTSAC | 3 cut(s) | 968, 1796, 2219 |
| TspGWI | ACGGA | 1 cut(s) | 1123 |
| TspRI | CASTG | 7 cut(s) | 811, 851, 1189, 1240, 1964, 2231, 2921 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1802 |
| VneI | GTGCAC | 1 cut(s) | 2912 |
| VpaK11BI | GGWCC | 4 cut(s) | 61, 1504, 1742, 1873 |
| VspI | ATTAAT | 1 cut(s) | 2175 |
| XceI | RCATGY | 2 cut(s) | 784, 2282 |
| XhoI | CTCGAG | 1 cut(s) | 440 |
| XmiI | GTMKAC | 3 cut(s) | 777, 793, 2939 |
| XspI | CTAG | 7 cut(s) | 336, 605, 863, 1170, 1644, 2600, 3020 |
| ZrmI | AGTACT | 2 cut(s) | 486, 3018 |
| Zsp2I | ATGCAT | 2 cut(s) | 243, 421 |