Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000868

Physical Location & Seq

Genomic Coordinates Forward (+)

29554466 .. 29559397

Gene Structure 4932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0290600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGGAGGAGACATTTGTGCCTTTTCGCGGGATCAAGAATGACCTTAGAGGAAGGTTGATGTGCTACAAGCAAGATTGGACTGGTGGCTTCAGAGCAGGATACAGGATTTTGGCTCCCACCACATACATCTTCTTTGCTTCAGCAATCCCGGTCATTTCATTTGGTGAACAGCTGGAGCGAAGTACTGATGGAGTTTTGACAGCAGTGCAAACCTTGGTATCTACGGCTGTCTGTGGAATCATACACTCCATAATTGGTGGTCAACCCTTGCTGATATTGGGTGTGGCTGAGCCTACTGTAATCATGTACACCTTTATGTTTAATTTTGCCAAGGAGCAAAAAGACTTGGGTCCAAAGCTGTTTCTAGCATGGACAGGCTGGGTATGTGTATGGACAGCAGCGTTGCTGTTCTTATTGGCTATTTTGGGTGCTTGTTCCATTATAAACAGATTCACCCGTGTAGCTGGAGAACTGTTTGGCCTCCTTATTGCTATGCTCTTCATGCAGCAATCCATTAAAGGACTTGTGGAGGAGTTTCGCATACCACAAAGAGAAGATACAAGTTTAGCAGAGTTTCTTCCTTCATGGAGGTTCGCAAATGGGATGTTTGCTTTGGTATTGTCATTTGGCCTTCTTCTCACTGCATTAAAAAGTCGGAAAGCAAGGTCTTGGCGCTATGGCTCTGGTTCGCTTAGAGGCTTCATAGCAGATTATGGAGTGCCACTTATGGTTCTAGTCTGGACTGCTGTATCTTACATACCAACTAGTAGTGTTCCGAAAGGAATCCCACGACGGCTCTTTAGTCCAAATCCATGGTCACCTGGTGCATATGAGAATTGGACTGTCATTAAGCAAATGCTCGATGTTCCGGTCCTTTATATCATTGGAGCTTTCATTCCAGCAACAATGATTGCAGTGCTTTATTATTTCGACCACAGTGTAGCATCCCAACTTGCTCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCTTCTTACCATTATGACTTGCTTCTTTTGGGGTTTCTGACCTTAATGTGTGGTCTGCTAGGAATTCCTCCATCAAATGGTGTCATTCCACAGTCACCAATGCATACTAAGAGTTTGGCTACTCTTAAACACCAGTTGCTTCGTAATAAACTTGTAGCAACAGCACGCAAAAGTATGAGAAAGAATGCTAGCTTGGGACAGCTGTATGGAAATATGCAAGAAGCCTATCATCAAATGCAGACTCCTTTGATTTACCAGGGTGCCTCATCTAAGGGACTGAATGAGTTAAAAGAATCAACTATCCAGGCAGCTTCAAGTATGGGAAACTATATTGATGCGCCAGTTGATGATACAGTGTTCGATGTGGAGAAAGAGATTGACGATCTATTACCTGTTGAGGTGAAAGAACAGCGTCTTAGTAACATACTTCAAGCTATACTGGTCGGAGCATGTGTTGCAGCCATGCCTATACTAAAAAAGATCCCAACCTCTGTCCTTTGGGGCTACTTTGCCTTCATGGCGATTGAAAGCTTACCCGGTAACCAATTTTGGGAAAGGATCTTACTGCTCTTTACTGCTCCCAGTAGAAGATTCAAAGTCCTCGAGGAGTACCATGCAACTTTTGTAGAAACTGTGCCTTTCAAGACAATTGTGATGTTTACAATTTTCCAAACCGTATACTTGCTTATATGTTTTGGGCTTACATGGGTTCCAATTGCCGGGGTCATGTTTCCATTGATGATCATGCTGTTGGTTCCTGTGAGACAATACTTTCTGCCCAAGTTTTTCAAAGGAGCTCATCTTCAGGATTTGGATGCAGCAGAGTATGAAGAGGCTCCAGCTTTACCATTTAATCTTGCAGCGGAGACAGAGCTGGGAGCTGGAGCTTCCTATGCAGGAGATGCAGAAATACTAGATGAGGCTTTTACCCGAAGCCGAGGTGAGTTTAAGCATGTGAGCAGTCCTAAGATCTCAAGTACAACTTCAACACCAGCTAATGCCCCCAAAAGCCTTGAGAGTCCACGTGTCTCCTTCAGTCCTCGAATAAGTGAGCTAAGAGGAGTGCCAAGTCCTCGTTCTGGCGGAAGAGGGCCACATAGTCCAAAGACTGGAGAAGCGAAGCCTTCCATTCTGGGGAAGAGTCCTAGTGGTAGCAACACGACATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0004571 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006491 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009100 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0012505 GO:0015923 GO:0015924 GO:0016787 GO:0016798 GO:0019538 GO:0019941 GO:0030163 GO:0030433 GO:0033554 GO:0034976 GO:0036503 GO:0042221 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051603 GO:0051716 GO:0071704 GO:1901135 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Glyco_hydro_47

Protein Analysis

718

Amino Acids

79.43

Weight (kDa)

9.09

Isoelectric Point (pI)

41.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HCO3_cotransp	PF00955	7 - 180	4e-34	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	200 - 372	1.1e-24	HCO3- transporter integral membrane domain
HCO3_cotransp	PF00955	461 - 603	2.5e-30	HCO3- transporter integral membrane domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000868)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	443
AbsI	CCTCGAGG	1 cut(s)	1589
AccB1I	GGYRCC	1 cut(s)	1247
AccB7I	CCANNNNNTGG	2 cut(s)	1064, 2096
AccI	GTMKAC	1 cut(s)	1665
AccII	CGCG	1 cut(s)	27
AciI	CCGC	3 cut(s)	27, 1850, 2070
AclWI	GGATC	3 cut(s)	38, 1462, 1553
AcsI	RAATTY	1 cut(s)	1050
AcuI	CTGAAG	4 cut(s)	73, 123, 1775, 2005
AcvI	CACGTG	1 cut(s)	2012
AdeI	CACNNNGTG	1 cut(s)	824
AfaI	GTAC	4 cut(s)	184, 308, 1598, 1966
AfiI	CCNNNNNNNGG	7 cut(s)	26, 1064, 1537, 1706, 2066, 2096, 2121
AflIII	ACRYGT	1 cut(s)	2011
AgsI	TTSAA	8 cut(s)	973, 1302, 1418, 1514, 1582, 1630, 1777, 1974
AhlI	ACTAGT	1 cut(s)	764
AjnI	CCWGG	3 cut(s)	820, 1242, 1290
AjuI	GAANNNNNNNTTGG	4 cut(s)	1163, 1195, 2047, 2079
Alw21I	GWGCWC	1 cut(s)	1786
Alw26I	GTCTC	4 cut(s)	2, 1744, 1847, 2020
AlwI	GGATC	3 cut(s)	38, 1462, 1553
Ama87I	CYCGRG	1 cut(s)	1589
AoxI	GGCC	3 cut(s)	478, 628, 2078
ApeKI	GCWGC	6 cut(s)	398, 505, 1295, 1445, 1805, 1847
ApoI	RAATTY	1 cut(s)	1050
ArsI	GACNNNNNNTTYG	2 cut(s)	800, 832
Asp700I	GAANNNNTTC	1 cut(s)	968
AspLEI	GCGC	2 cut(s)	675, 1327
AspS9I	GGNCC	3 cut(s)	350, 871, 2078
AsuC2I	CCSGG	3 cut(s)	149, 1524, 1708
AsuHPI	GGTGA	6 cut(s)	176, 445, 810, 1074, 1399, 1940
AsuNHI	GCTAGC	1 cut(s)	1175
AvaI	CYCGRG	1 cut(s)	1589
AvaII	GGWCC	2 cut(s)	350, 871
BaeI	ACNNNNGTAYC	4 cut(s)	201, 234, 732, 765
BanI	GGYRCC	1 cut(s)	1247
BanII	GRGCYC	1 cut(s)	1786
BbrPI	CACGTG	1 cut(s)	2012
Bbv12I	GWGCWC	1 cut(s)	1786
BbvI	GCAGC	6 cut(s)	410, 517, 1307, 1457, 1817, 1859
BccI	CCATC	3 cut(s)	182, 994, 1066
BceAI	ACGGC	2 cut(s)	240, 809
BciT130I	CCWGG	3 cut(s)	822, 1244, 1292
BciVI	GTATCC	1 cut(s)	92
BclI	TGATCA	1 cut(s)	1728
BcnI	CCSGG	3 cut(s)	149, 1524, 1708
BcoDI	GTCTC	4 cut(s)	2, 1744, 1847, 2020
BcuI	ACTAGT	1 cut(s)	764
BfaI	CTAG	7 cut(s)	365, 734, 765, 1046, 1176, 1901, 2133
BfoI	RGCGCY	1 cut(s)	676
BfuI	GTATCC	1 cut(s)	92
BglI	GCCNNNNNGGC	1 cut(s)	1505
BglII	AGATCT	1 cut(s)	1956
BisI	GCNGC	6 cut(s)	399, 506, 1296, 1446, 1806, 1848
BlpI	GCTNAGC	2 cut(s)	288, 957
BlsI	GCNGC	6 cut(s)	400, 507, 1297, 1447, 1807, 1849
BmcAI	AGTACT	1 cut(s)	184
Bme1390I	CCNGG	6 cut(s)	149, 822, 1244, 1292, 1524, 1708
Bme18I	GGWCC	2 cut(s)	350, 871
BmeT110I	CYCGRG	1 cut(s)	1589
BmgT120I	GGNCC	3 cut(s)	350, 871, 2078
BmiI	GGNNCC	6 cut(s)	114, 351, 1249, 1698, 1743, 1824
BmrFI	CCNGG	6 cut(s)	149, 822, 1244, 1292, 1524, 1708
BmrI	ACTGGG	1 cut(s)	1563
BmsI	GCATC	4 cut(s)	953, 1312, 1792, 1879
BmtI	GCTAGC	1 cut(s)	1179
BmuI	ACTGGG	1 cut(s)	1563
BoxI	GACNNNNGTC	1 cut(s)	348
BpmI	CTGGAG	5 cut(s)	194, 486, 1809, 1890, 2118
Bpu1102I	GCTNAGC	2 cut(s)	288, 957
BpuEI	CTTGAG	2 cut(s)	1945, 2021
BpuMI	CCSGG	3 cut(s)	149, 1524, 1708
BsaAI	YACGTR	1 cut(s)	2012
BsaJI	CCNNGG	6 cut(s)	213, 330, 812, 1243, 1707, 1924
BsaWI	WCCGGW	1 cut(s)	868
BsaXI	ACNNNNNCTCC	2 cut(s)	1425, 1455
Bsc4I	CCNNNNNNNGG	7 cut(s)	26, 1064, 1537, 1706, 2066, 2096, 2121
Bse1I	ACTGG	6 cut(s)	85, 1120, 1328, 1431, 1569, 2101
BseBI	CCWGG	3 cut(s)	822, 1244, 1292
BseDI	CCNNGG	6 cut(s)	213, 330, 812, 1243, 1707, 1924
BseGI	GGATG	3 cut(s)	609, 944, 1807
BseLI	CCNNNNNNNGG	7 cut(s)	26, 1064, 1537, 1706, 2066, 2096, 2121
BseMII	CTCAG	2 cut(s)	279, 971
BseNI	ACTGG	6 cut(s)	85, 1120, 1328, 1431, 1569, 2101
BseRI	GAGGAG	4 cut(s)	20, 545, 1607, 2061
BseXI	GCAGC	6 cut(s)	410, 517, 1307, 1457, 1817, 1859
BseYI	CCCAGC	2 cut(s)	378, 1861
Bsh1236I	CGCG	1 cut(s)	27
BshFI	GGCC	3 cut(s)	480, 630, 2080
BshNI	GGYRCC	1 cut(s)	1247
BsiHKAI	GWGCWC	1 cut(s)	1786
BsiHKCI	CYCGRG	1 cut(s)	1589
BsiSI	CCGG	4 cut(s)	149, 869, 1524, 1707
BslFI	GGGAC	2 cut(s)	1197, 1275
BslI	CCNNNNNNNGG	7 cut(s)	26, 1064, 1537, 1706, 2066, 2096, 2121
BsmAI	GTCTC	4 cut(s)	2, 1744, 1847, 2020
BsmFI	GGGAC	2 cut(s)	1197, 1275
BsmI	GAATGC	1 cut(s)	1177
BsnI	GGCC	3 cut(s)	480, 630, 2080
BsoBI	CYCGRG	1 cut(s)	1589
Bsp1286I	GDGCHC	1 cut(s)	1786
Bsp1407I	TGTACA	1 cut(s)	306
Bsp143I	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
Bsp1720I	GCTNAGC	2 cut(s)	288, 957
Bsp19I	CCATGG	1 cut(s)	812
BspACI	CCGC	3 cut(s)	27, 1850, 2070
BspANI	GGCC	3 cut(s)	480, 630, 2080
BspCNI	CTCAG	2 cut(s)	280, 970
BspFNI	CGCG	1 cut(s)	27
BspLI	GGNNCC	6 cut(s)	114, 351, 1249, 1698, 1743, 1824
BspOI	GCTAGC	1 cut(s)	1179
BspPI	GGATC	3 cut(s)	38, 1462, 1553
BspQI	GCTCTTC	1 cut(s)	503
BspT107I	GGYRCC	1 cut(s)	1247
BsrGI	TGTACA	1 cut(s)	306
BsrI	ACTGG	6 cut(s)	85, 1120, 1328, 1431, 1569, 2101
BssECI	CCNNGG	6 cut(s)	213, 330, 812, 1243, 1707, 1924
BssMI	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
BssNAI	GTATAC	1 cut(s)	1666
BssT1I	CCWWGG	3 cut(s)	213, 330, 812
Bst1107I	GTATAC	1 cut(s)	1666
Bst2UI	CCWGG	3 cut(s)	822, 1244, 1292
Bst4CI	ACNGT	8 cut(s)	298, 474, 844, 938, 1080, 1342, 1621, 1663
Bst6I	CTCTTC	4 cut(s)	503, 1812, 2068, 2120
BstAPI	GCANNNNNTGC	2 cut(s)	1442, 1889
BstAUI	TGTACA	1 cut(s)	306
BstBAI	YACGTR	1 cut(s)	2012
BstC8I	GCNNGC	2 cut(s)	1153, 1177
BstDEI	CTNAG	9 cut(s)	44, 288, 692, 957, 1095, 1257, 1403, 1953, 2042
BstDSI	CCRYGG	1 cut(s)	812
BstEII	GGTNACC	2 cut(s)	816, 1526
BstF5I	GGATG	3 cut(s)	609, 944, 1807
BstFNI	CGCG	1 cut(s)	27
BstH2I	RGCGCY	1 cut(s)	676
BstHHI	GCGC	2 cut(s)	675, 1327
BstKTI	GATC	6 cut(s)	33, 1372, 1470, 1548, 1731, 1959
BstMAI	GTCTC	4 cut(s)	2, 1744, 1847, 2020
BstMBI	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
BstMWI	GCNNNNNNNGC	5 cut(s)	502, 1442, 1505, 1880, 1889
BstNI	CCWGG	3 cut(s)	822, 1244, 1292
BstNSI	RCATGY	2 cut(s)	1440, 1943
BstPAI	GACNNNNGTC	1 cut(s)	348
BstPI	GGTNACC	2 cut(s)	816, 1526
BstSCI	CCNGG	6 cut(s)	147, 820, 1242, 1290, 1522, 1706
BstUI	CGCG	1 cut(s)	27
BstV1I	GCAGC	6 cut(s)	410, 517, 1307, 1457, 1817, 1859
BstX2I	RGATCY	3 cut(s)	1467, 1545, 1956
BstXI	CCANNNNNNTGG	1 cut(s)	813
BstYI	RGATCY	3 cut(s)	1467, 1545, 1956
BstZ17I	GTATAC	1 cut(s)	1666
BsuI	GTATCC	1 cut(s)	92
BsuRI	GGCC	3 cut(s)	480, 630, 2080
BtgI	CCRYGG	1 cut(s)	812
BtsCI	GGATG	3 cut(s)	609, 944, 1807
BtsI	GCAGTG	3 cut(s)	210, 639, 921
BtsIMutI	CAGTG	5 cut(s)	210, 639, 921, 943, 1347
Cac8I	GCNNGC	2 cut(s)	1153, 1177
CfoI	GCGC	2 cut(s)	675, 1327
Cfr13I	GGNCC	3 cut(s)	350, 871, 2078
CseI	GACGC	1 cut(s)	1388
CsiI	ACCWGGT	1 cut(s)	820
Csp6I	GTAC	4 cut(s)	183, 307, 1597, 1965
CviQI	GTAC	4 cut(s)	183, 307, 1597, 1965
DdeI	CTNAG	9 cut(s)	44, 288, 692, 957, 1095, 1257, 1403, 1953, 2042
DpnI	GATC	6 cut(s)	32, 1371, 1469, 1547, 1730, 1958
DpnII	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
DraIII	CACNNNGTG	1 cut(s)	824
Eam1104I	CTCTTC	4 cut(s)	503, 1812, 2068, 2120
EarI	CTCTTC	4 cut(s)	503, 1812, 2068, 2120
EciI	GGCGGA	1 cut(s)	2085
Ecl136II	GAGCTC	1 cut(s)	1784
Eco130I	CCWWGG	3 cut(s)	213, 330, 812
Eco24I	GRGCYC	1 cut(s)	1786
Eco47I	GGWCC	2 cut(s)	350, 871
Eco53kI	GAGCTC	1 cut(s)	1784
Eco57I	CTGAAG	4 cut(s)	73, 123, 1775, 2005
Eco72I	CACGTG	1 cut(s)	2012
Eco88I	CYCGRG	1 cut(s)	1589
Eco91I	GGTNACC	2 cut(s)	816, 1526
EcoICRI	GAGCTC	1 cut(s)	1784
EcoO65I	GGTNACC	2 cut(s)	816, 1526
EcoRI	GAATTC	1 cut(s)	1050
EcoRII	CCWGG	3 cut(s)	820, 1242, 1290
EcoT14I	CCWWGG	3 cut(s)	213, 330, 812
EcoT22I	ATGCAT	1 cut(s)	1092
EcoT38I	GRGCYC	1 cut(s)	1786
ErhI	CCWWGG	3 cut(s)	213, 330, 812
FalI	AAGNNNNNCTT	2 cut(s)	1954, 1986
FaqI	GGGAC	2 cut(s)	1197, 1275
FauI	CCCGC	1 cut(s)	20
FauNDI	CATATG	1 cut(s)	829
FbaI	TGATCA	1 cut(s)	1728
FblI	GTMKAC	1 cut(s)	1665
Fnu4HI	GCNGC	6 cut(s)	399, 506, 1296, 1446, 1806, 1848
FokI	GGATG	3 cut(s)	616, 931, 1814
FriOI	GRGCYC	1 cut(s)	1786
Fsp4HI	GCNGC	6 cut(s)	399, 506, 1296, 1446, 1806, 1848
FspBI	CTAG	7 cut(s)	365, 734, 765, 1046, 1176, 1901, 2133
GlaI	GCGC	2 cut(s)	674, 1326
GluI	GCNGC	6 cut(s)	399, 506, 1296, 1446, 1806, 1848
GsaI	CCCAGC	2 cut(s)	382, 1865
GsuI	CTGGAG	5 cut(s)	194, 486, 1809, 1890, 2118
HaeII	RGCGCY	1 cut(s)	676
HaeIII	GGCC	3 cut(s)	480, 630, 2080
HapII	CCGG	4 cut(s)	149, 869, 1524, 1707
HgaI	GACGC	1 cut(s)	1388
HhaI	GCGC	2 cut(s)	675, 1327
Hin6I	GCGC	2 cut(s)	673, 1325
HinP1I	GCGC	2 cut(s)	673, 1325
HincII	GTYRAC	1 cut(s)	263
HindII	GTYRAC	1 cut(s)	263
HindIII	AAGCTT	1 cut(s)	1516
HinfI	GANTC	8 cut(s)	237, 450, 783, 1228, 1280, 1578, 2005, 2128
HpaII	CCGG	4 cut(s)	149, 869, 1524, 1707
HphI	GGTGA	6 cut(s)	176, 445, 810, 1074, 1399, 1940
Hpy166II	GTNNAC	6 cut(s)	167, 263, 309, 1647, 1666, 2009
Hpy188I	TCNGA	5 cut(s)	92, 657, 777, 1026, 1433
Hpy188III	TCNNGA	4 cut(s)	34, 739, 1630, 1793
Hpy8I	GTNNAC	6 cut(s)	167, 263, 309, 1647, 1666, 2009
Hpy99I	CGWCG	1 cut(s)	795
HpyAV	CCTTC	6 cut(s)	45, 591, 641, 1510, 2029, 2121
HpyCH4III	ACNGT	8 cut(s)	298, 474, 844, 938, 1080, 1342, 1621, 1663
HpyCH4IV	ACGT	1 cut(s)	2011
HpyF10VI	GCNNNNNNNGC	5 cut(s)	502, 1442, 1505, 1880, 1889
HpyF3I	CTNAG	9 cut(s)	44, 288, 692, 957, 1095, 1257, 1403, 1953, 2042
HpySE526I	ACGT	1 cut(s)	2011
HspAI	GCGC	2 cut(s)	673, 1325
Ksp22I	TGATCA	1 cut(s)	1728
Kzo9I	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
LguI	GCTCTTC	1 cut(s)	503
Lsp1109I	GCAGC	6 cut(s)	410, 517, 1307, 1457, 1817, 1859
LweI	GCATC	4 cut(s)	953, 1312, 1792, 1879
MabI	ACCWGGT	1 cut(s)	820
MaeI	CTAG	7 cut(s)	365, 734, 765, 1046, 1176, 1901, 2133
MaeII	ACGT	1 cut(s)	2011
MaeIII	GTNAC	4 cut(s)	816, 1080, 1406, 1526
MalI	GATC	6 cut(s)	32, 1371, 1469, 1547, 1730, 1958
MboI	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
MfeI	CAATTG	2 cut(s)	1635, 1701
MflI	RGATCY	3 cut(s)	1467, 1545, 1956
MhlI	GDGCHC	1 cut(s)	1786
MluCI	AATT	9 cut(s)	252, 322, 835, 973, 1050, 1532, 1635, 1650, 1701
MlyI	GAGTC	3 cut(s)	1222, 2014, 2137
MmeI	TCCRAC	2 cut(s)	635, 1411
Mph1103I	ATGCAT	1 cut(s)	1092
MroXI	GAANNNNTTC	1 cut(s)	968
MseI	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1839, 1935
MslI	CAYNNNNRTG	1 cut(s)	314
MspA1I	CMGCKG	3 cut(s)	172, 1189, 1850
MspI	CCGG	4 cut(s)	149, 869, 1524, 1707
MspR9I	CCNGG	6 cut(s)	149, 822, 1244, 1292, 1524, 1708
MunI	CAATTG	2 cut(s)	1635, 1701
Mva1269I	GAATGC	1 cut(s)	1177
MvaI	CCWGG	3 cut(s)	822, 1244, 1292
MvnI	CGCG	1 cut(s)	27
MwoI	GCNNNNNNNGC	5 cut(s)	502, 1442, 1505, 1880, 1889
NciI	CCSGG	3 cut(s)	149, 1524, 1708
NcoI	CCATGG	1 cut(s)	812
NdeI	CATATG	1 cut(s)	829
NdeII	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
NheI	GCTAGC	1 cut(s)	1175
NlaIV	GGNNCC	6 cut(s)	114, 351, 1249, 1698, 1743, 1824
NmeAIII	GCCGAG	1 cut(s)	1949
NmuCI	GTSAC	2 cut(s)	816, 1080
NsiI	ATGCAT	1 cut(s)	1092
NspI	RCATGY	2 cut(s)	1440, 1943
PaeR7I	CTCGAG	1 cut(s)	1589
PciSI	GCTCTTC	1 cut(s)	503
PctI	GAATGC	1 cut(s)	1177
PdmI	GAANNNNTTC	1 cut(s)	968
PfeI	GAWTC	5 cut(s)	237, 450, 783, 1280, 1578
PflMI	CCANNNNNTGG	2 cut(s)	1064, 2096
PkrI	GCNGC	6 cut(s)	400, 507, 1297, 1447, 1807, 1849
PleI	GAGTC	3 cut(s)	1222, 2013, 2136
PmaCI	CACGTG	1 cut(s)	2012
PmlI	CACGTG	1 cut(s)	2012
PpsI	GAGTC	3 cut(s)	1222, 2013, 2136
Ppu21I	YACGTR	1 cut(s)	2012
PshAI	GACNNNNGTC	1 cut(s)	348
PsiI	TTATAA	1 cut(s)	443
Psp124BI	GAGCTC	1 cut(s)	1786
Psp6I	CCWGG	3 cut(s)	820, 1242, 1290
PspCI	CACGTG	1 cut(s)	2012
PspEI	GGTNACC	2 cut(s)	816, 1526
PspFI	CCCAGC	2 cut(s)	378, 1861
PspGI	CCWGG	3 cut(s)	820, 1242, 1290
PspN4I	GGNNCC	6 cut(s)	114, 351, 1249, 1698, 1743, 1824
PspPI	GGNCC	3 cut(s)	350, 871, 2078
PspXI	VCTCGAGB	1 cut(s)	1589
PsuI	RGATCY	3 cut(s)	1467, 1545, 1956
PvuII	CAGCTG	2 cut(s)	172, 1189
RsaI	GTAC	4 cut(s)	184, 308, 1598, 1966
RsaNI	GTAC	4 cut(s)	183, 307, 1597, 1965
RseI	CAYNNNNRTG	1 cut(s)	314
SacI	GAGCTC	1 cut(s)	1786
SapI	GCTCTTC	1 cut(s)	503
SaqAI	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1839, 1935
SatI	GCNGC	6 cut(s)	399, 506, 1296, 1446, 1806, 1848
Sau3AI	GATC	6 cut(s)	30, 1369, 1467, 1545, 1728, 1956
Sau96I	GGNCC	3 cut(s)	350, 871, 2078
ScaI	AGTACT	1 cut(s)	184
SchI	GAGTC	3 cut(s)	1222, 2014, 2137
ScrFI	CCNGG	6 cut(s)	149, 822, 1244, 1292, 1524, 1708
SduI	GDGCHC	1 cut(s)	1786
SexAI	ACCWGGT	1 cut(s)	820
SfaNI	GCATC	4 cut(s)	953, 1312, 1792, 1879
Sfr274I	CTCGAG	1 cut(s)	1589
SinI	GGWCC	2 cut(s)	350, 871
SlaI	CTCGAG	1 cut(s)	1589
SmiMI	CAYNNNNRTG	1 cut(s)	314
SmlI	CTYRAG	3 cut(s)	1589, 1960, 2000
SmoI	CTYRAG	3 cut(s)	1589, 1960, 2000
SpeI	ACTAGT	1 cut(s)	764
Sse9I	AATT	9 cut(s)	252, 322, 835, 973, 1050, 1532, 1635, 1650, 1701
SsiI	CCGC	3 cut(s)	27, 1850, 2070
SspMI	CTAG	7 cut(s)	365, 734, 765, 1046, 1176, 1901, 2133
SstI	GAGCTC	1 cut(s)	1786
StyD4I	CCNGG	6 cut(s)	147, 820, 1242, 1290, 1522, 1706
StyI	CCWWGG	3 cut(s)	213, 330, 812
TaaI	ACNGT	8 cut(s)	298, 474, 844, 938, 1080, 1342, 1621, 1663
TaiI	ACGT	1 cut(s)	2014
TaqI	TCGA	5 cut(s)	861, 930, 1347, 1590, 2029
TasI	AATT	9 cut(s)	252, 322, 835, 973, 1050, 1532, 1635, 1650, 1701
TatI	WGTACW	3 cut(s)	182, 306, 1964
TfiI	GAWTC	5 cut(s)	237, 450, 783, 1280, 1578
Tru1I	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1839, 1935
Tru9I	TTAA	9 cut(s)	321, 516, 647, 849, 1031, 1113, 1274, 1839, 1935
TscAI	CASTG	5 cut(s)	210, 646, 921, 943, 1347
TseFI	GTSAC	2 cut(s)	816, 1080
TseI	GCWGC	6 cut(s)	398, 505, 1295, 1445, 1805, 1847
Tsp45I	GTSAC	2 cut(s)	816, 1080
TspDTI	ATGAA	7 cut(s)	147, 490, 573, 691, 883, 1492, 1830
TspRI	CASTG	5 cut(s)	210, 646, 921, 943, 1347
Van91I	CCANNNNNTGG	2 cut(s)	1064, 2096
VpaK11BI	GGWCC	2 cut(s)	350, 871
XapI	RAATTY	1 cut(s)	1050
XceI	RCATGY	2 cut(s)	1440, 1943
XhoI	CTCGAG	1 cut(s)	1589
XmiI	GTMKAC	1 cut(s)	1665
XmnI	GAANNNNTTC	1 cut(s)	968
XspI	CTAG	7 cut(s)	365, 734, 765, 1046, 1176, 1901, 2133
ZrmI	AGTACT	1 cut(s)	184
Zsp2I	ATGCAT	1 cut(s)	1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.