Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0000868

Physical Location & Seq

Genomic Coordinates Reverse (-)

20907865 .. 20910299

Gene Structure 2435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0227700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGAAGCAGTCTCATTCCAGCTCCCTAATCAACACTCTCCGAAATGCACTACGTCACGTTTGGCTGCCCAATTCTGATCAGAAGTTCTGGAAAGGCTCGCCAGACAGCCTCTACCGTCGGATCTTCTGGAGCGAATTTAAGGCCTCTGCATTACCGATTCTCGACCGGTGGGTCCAAGAAGGCCGAACCGTAGATAAAGATGACCTCGTCACTATCATCAAGGAGCTCAGGTACTACAAAAACTACGGCCGAGCTCTTGAGGTGTCCATGTGGATGAGTGACAAAAGGTATGCTGTACTTTTGCCCTCTGACGTAGCCATCCGGCTCGACTTGATTGCAAGAGTTCATGGAATAGAACAAGCTGAGAATTTTTTTAACAACACTCCCAAACAATTGAAAGTCCTTCAGGTTTACCATGCTCTCCTCAACTGCTATGCTCGTGCAAAACAGTTGGAAAAAGCAGAGGCCACCATGCAGAAGATGAGGGATTTGGGTTTCTGTAGGACGTCATGGTCATACAATGCTTTGCTCAATTTGTATTGTAAGACTGGAAACCATGATAAATTTGACAGTCTGATGAGTGAAATGGAAGAGAATGGCATCGCGTTTGACAGATTCACATATGGGATCAGGCTCAGTGCAGCTGCAGCTGCTTCTGATATCGAGGGAATTGACAAGATTCTGGCAGAATGGGAATCCGATCCTAAGAGTCTTTTGGACTGGATTTCTTATGCCGTTGCAGCAAATGGTTATACAAAAGCAGGAGCTGTGGACAAGGCTTTAGCAATGCTAAAGAGATCAGAGGAACAGATACCAAGTTCTAAAAGACAGAGGCCAGCATATGAGCAACTTATGACGCAGTATGCAGTACTAGGGAAAAAAGATGATACTTTGAGACTATGGAAATGTTACAAGGAGCAGATGAAAGTATACAACAATGGTTATCTATGCATAATTACCTCACTCTTGAAGTCTGATGATATTGAGAGTGCTGAGAAGATCTTTGAAGAGAATGGTTTTCTTGACAAGGCTGAAGCCATTGTGAGCAGGATAAGATTGAAAGATGAGAAACCTAATCATACGACATGGATTCATTTGGCGAAGGGGTATCTTGATCAAGGTCAAATTGAGAAGGCACTTGAATCGGCAACAAAAGCAGTTTCTGCGCGCCGCCAGGGTGGATGCCCAACAAGCATGTTGTGGTCGCATGTCTGGAAAAGTTCAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

409

Amino Acids

46.99

Weight (kDa)

9.01

Isoelectric Point (pI)

39.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR	PF01535	172 - 201	1.3e-06	PPR repeat
PPR_2	PF13041	172 - 213	1.3e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000868)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0012800 Rorug01G0014700 Rorug01G0030600 Rorug01G0033400 Rorug01G0037400 Rorug01G0037500 Rorug01G0038500 Rorug01G0039300 Rorug01G0043500 Rorug01G0076500 Rorug01G0079900 Rorug01G0090400 Rorug01G0093000 Rorug01G0093100 Rorug01G0111200 Rorug01G0111400 Rorug01G0224300 Rorug02G0001600 Rorug02G0090400 Rorug02G0192300 Rorug02G0216200 Rorug02G0247800 Rorug02G0291300 Rorug02G0297600 Rorug02G0322500 Rorug02G0415300 Rorug02G0514600 Rorug02G0560900 Rorug03G0049700 Rorug03G0126700 Rorug03G0202000.1 Rorug03G0219400 Rorug03G0227700 Rorug03G0245600.1 Rorug03G0258200 Rorug03G0290600 Rorug03G0308500 Rorug03G0333100 Rorug03G0338000 Rorug04G0074000 Rorug04G0087900 Rorug04G0108100 Rorug04G0150600 Rorug05G0152800 Rorug05G0237200 Rorug05G0284800 Rorug05G0398700 Rorug05G0398700 Rorug05G0498600 Rorug05G0514000 Rorug05G0540000 Rorug05G0540900 Rorug05G0541000 Rorug05G0541300 Rorug05G0555900 Rorug05G0559600 Rorug06G0033800 Rorug06G0162600 Rorug06G0199900 Rorug06G0324900 Rorug07G0094200 Rorug07G0146100 Rorug07G0183400 Rorug07G0255100 Rorug07G0259300 Rorug07G0271300 Rorug07G0294900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	170, 511
AatII	GACGTC	1 cut(s)	509
AccI	GTMKAC	1 cut(s)	930
AccII	CGCG	2 cut(s)	605, 1168
AciI	CCGC	1 cut(s)	1171
AclWI	GGATC	3 cut(s)	128, 635, 695
AcoI	YGGCCR	1 cut(s)	247
AcsI	RAATTY	3 cut(s)	134, 367, 563
AcuI	CTGAAG	2 cut(s)	389, 1053
AcyI	GRCGYC	1 cut(s)	506
AfaI	GTAC	3 cut(s)	233, 297, 870
AgeI	ACCGGT	1 cut(s)	165
AgsI	TTSAA	6 cut(s)	397, 970, 1007, 1060, 1142, 1224
AjnI	CCWGG	1 cut(s)	1173
AluBI	AGCT	7 cut(s)	21, 226, 254, 362, 644, 650, 767
AluI	AGCT	7 cut(s)	21, 226, 254, 362, 644, 650, 767
Alw21I	GWGCWC	2 cut(s)	228, 256
Alw26I	GTCTC	2 cut(s)	15, 889
AlwI	GGATC	3 cut(s)	128, 635, 695
AlwNI	CAGNNNCTG	2 cut(s)	767, 1163
AoxI	GGCC	5 cut(s)	141, 181, 247, 465, 833
ApeKI	GCWGC	6 cut(s)	64, 641, 644, 647, 650, 740
ApoI	RAATTY	3 cut(s)	134, 367, 563
AsiGI	ACCGGT	1 cut(s)	165
AspLEI	GCGC	2 cut(s)	1168, 1170
AspS9I	GGNCC	1 cut(s)	172
AvaII	GGWCC	1 cut(s)	172
BanII	GRGCYC	2 cut(s)	228, 256
BauI	CACGAG	1 cut(s)	438
Bbv12I	GWGCWC	2 cut(s)	228, 256
BbvI	GCAGC	6 cut(s)	51, 631, 637, 653, 659, 752
BccI	CCATC	1 cut(s)	326
BceAI	ACGGC	2 cut(s)	262, 719
BcgI	CGANNNNNNTGC	4 cut(s)	317, 351, 1125, 1159
BciT130I	CCWGG	1 cut(s)	1175
BclI	TGATCA	2 cut(s)	76, 1114
BcoDI	GTCTC	2 cut(s)	15, 889
BfaI	CTAG	1 cut(s)	872
BfmI	CTRYAG	2 cut(s)	499, 645
BglII	AGATCT	1 cut(s)	999
BisI	GCNGC	7 cut(s)	65, 642, 645, 648, 651, 741, 1171
BlsI	GCNGC	7 cut(s)	66, 643, 646, 649, 652, 742, 1172
BmcAI	AGTACT	1 cut(s)	870
Bme1390I	CCNGG	1 cut(s)	1175
Bme18I	GGWCC	1 cut(s)	172
BmgT120I	GGNCC	1 cut(s)	172
BmiI	GGNNCC	1 cut(s)	173
BmrFI	CCNGG	1 cut(s)	1175
BmsI	GCATC	2 cut(s)	609, 1172
BpmI	CTGGAG	1 cut(s)	148
Bpu10I	CCTNAGC	1 cut(s)	227
BpuEI	CTTGAG	1 cut(s)	278
BsaHI	GRCGYC	1 cut(s)	506
BsaJI	CCNNGG	1 cut(s)	1174
BsaWI	WCCGGW	1 cut(s)	165
BsaXI	ACNNNNNCTCC	2 cut(s)	215, 245
Bse118I	RCCGGY	1 cut(s)	165
Bse1I	ACTGG	2 cut(s)	553, 725
Bse3DI	GCAATG	1 cut(s)	792
BseBI	CCWGG	1 cut(s)	1175
BseDI	CCNNGG	1 cut(s)	1174
BseGI	GGATG	3 cut(s)	279, 318, 1187
BseMI	GCAATG	1 cut(s)	792
BseMII	CTCAG	4 cut(s)	241, 354, 649, 984
BseNI	ACTGG	2 cut(s)	553, 725
BsePI	GCGCGC	1 cut(s)	1166
BseRI	GAGGAG	1 cut(s)	413
BseX3I	CGGCCG	1 cut(s)	247
BseXI	GCAGC	6 cut(s)	51, 631, 637, 653, 659, 752
BsgI	GTGCAG	1 cut(s)	660
Bsh1236I	CGCG	2 cut(s)	605, 1168
Bsh1285I	CGRYCG	2 cut(s)	166, 250
BshFI	GGCC	5 cut(s)	143, 183, 249, 467, 835
BshTI	ACCGGT	1 cut(s)	165
BsiEI	CGRYCG	2 cut(s)	166, 250
BsiHKAI	GWGCWC	2 cut(s)	228, 256
BsiSI	CCGG	2 cut(s)	166, 322
BsmAI	GTCTC	2 cut(s)	15, 889
BsnI	GGCC	5 cut(s)	143, 183, 249, 467, 835
Bsp1286I	GDGCHC	2 cut(s)	228, 256
Bsp143I	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
BspACI	CCGC	1 cut(s)	1171
BspANI	GGCC	5 cut(s)	143, 183, 249, 467, 835
BspCNI	CTCAG	4 cut(s)	240, 355, 648, 985
BspFNI	CGCG	2 cut(s)	605, 1168
BspLI	GGNNCC	1 cut(s)	173
BspMAI	CTGCAG	1 cut(s)	649
BspPI	GGATC	3 cut(s)	128, 635, 695
BsrDI	GCAATG	1 cut(s)	792
BsrFI	RCCGGY	1 cut(s)	165
BsrI	ACTGG	2 cut(s)	553, 725
BssAI	RCCGGY	1 cut(s)	165
BssECI	CCNNGG	1 cut(s)	1174
BssHII	GCGCGC	1 cut(s)	1166
BssMI	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
BssNAI	GTATAC	1 cut(s)	931
BssNI	GRCGYC	1 cut(s)	506
BssSI	CACGAG	1 cut(s)	438
Bst1107I	GTATAC	1 cut(s)	931
Bst2BI	CACGAG	1 cut(s)	438
Bst2UI	CCWGG	1 cut(s)	1175
Bst4CI	ACNGT	4 cut(s)	116, 190, 450, 572
Bst6I	CTCTTC	2 cut(s)	585, 1002
BstACI	GRCGYC	1 cut(s)	506
BstAPI	GCANNNNNTGC	1 cut(s)	1163
BstC8I	GCNNGC	3 cut(s)	98, 837, 1168
BstDEI	CTNAG	5 cut(s)	227, 363, 635, 705, 993
BstF5I	GGATG	3 cut(s)	279, 318, 1187
BstFNI	CGCG	2 cut(s)	605, 1168
BstHHI	GCGC	2 cut(s)	1168, 1170
BstKTI	GATC	7 cut(s)	79, 123, 630, 703, 800, 1002, 1117
BstMAI	GTCTC	2 cut(s)	15, 889
BstMBI	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
BstMCI	CGRYCG	2 cut(s)	166, 250
BstMWI	GCNNNNNNNGC	6 cut(s)	647, 650, 740, 1154, 1163, 1191
BstNI	CCWGG	1 cut(s)	1175
BstNSI	RCATGY	2 cut(s)	1198, 1211
BstSCI	CCNGG	1 cut(s)	1173
BstSFI	CTRYAG	2 cut(s)	499, 645
BstUI	CGCG	2 cut(s)	605, 1168
BstV1I	GCAGC	6 cut(s)	51, 631, 637, 653, 659, 752
BstX2I	RGATCY	2 cut(s)	120, 999
BstYI	RGATCY	2 cut(s)	120, 999
BstZ17I	GTATAC	1 cut(s)	931
BstZI	CGGCCG	1 cut(s)	247
BsuRI	GGCC	5 cut(s)	143, 183, 249, 467, 835
BtgZI	GCGATG	1 cut(s)	586
BtsCI	GGATG	3 cut(s)	279, 318, 1187
BtsIMutI	CAGTG	1 cut(s)	643
Cac8I	GCNNGC	3 cut(s)	98, 837, 1168
CaiI	CAGNNNCTG	2 cut(s)	767, 1163
CfoI	GCGC	2 cut(s)	1168, 1170
Cfr10I	RCCGGY	1 cut(s)	165
Cfr13I	GGNCC	1 cut(s)	172
CseI	GACGC	1 cut(s)	865
Csp6I	GTAC	3 cut(s)	232, 296, 869
CspAI	ACCGGT	1 cut(s)	165
CviAII	CATG	9 cut(s)	268, 347, 416, 472, 510, 557, 1086, 1195, 1208
CviQI	GTAC	3 cut(s)	232, 296, 869
DdeI	CTNAG	5 cut(s)	227, 363, 635, 705, 993
DpnI	GATC	7 cut(s)	78, 122, 629, 702, 799, 1001, 1116
DpnII	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
DrdI	GACNNNNNNGTC	2 cut(s)	170, 511
DseDI	GACNNNNNNGTC	2 cut(s)	170, 511
EaeI	YGGCCR	1 cut(s)	247
EagI	CGGCCG	1 cut(s)	247
Eam1104I	CTCTTC	2 cut(s)	585, 1002
EarI	CTCTTC	2 cut(s)	585, 1002
Ecl136II	GAGCTC	2 cut(s)	226, 254
EclXI	CGGCCG	1 cut(s)	247
Eco147I	AGGCCT	1 cut(s)	143
Eco24I	GRGCYC	2 cut(s)	228, 256
Eco32I	GATATC	1 cut(s)	661
Eco47I	GGWCC	1 cut(s)	172
Eco52I	CGGCCG	1 cut(s)	247
Eco53kI	GAGCTC	2 cut(s)	226, 254
Eco57I	CTGAAG	2 cut(s)	389, 1053
EcoICRI	GAGCTC	2 cut(s)	226, 254
EcoRII	CCWGG	1 cut(s)	1173
EcoRV	GATATC	1 cut(s)	661
EcoT22I	ATGCAT	1 cut(s)	953
EcoT38I	GRGCYC	2 cut(s)	228, 256
FaeI	CATG	9 cut(s)	271, 350, 419, 475, 513, 560, 1089, 1198, 1211
FatI	CATG	9 cut(s)	267, 346, 415, 471, 509, 556, 1085, 1194, 1207
FauNDI	CATATG	2 cut(s)	622, 841
FbaI	TGATCA	2 cut(s)	76, 1114
FblI	GTMKAC	1 cut(s)	930
Fnu4HI	GCNGC	7 cut(s)	65, 642, 645, 648, 651, 741, 1171
FokI	GGATG	3 cut(s)	286, 305, 1194
FriOI	GRGCYC	2 cut(s)	228, 256
Fsp4HI	GCNGC	7 cut(s)	65, 642, 645, 648, 651, 741, 1171
FspBI	CTAG	1 cut(s)	872
GlaI	GCGC	2 cut(s)	1167, 1169
GluI	GCNGC	7 cut(s)	65, 642, 645, 648, 651, 741, 1171
GsuI	CTGGAG	1 cut(s)	148
HaeIII	GGCC	5 cut(s)	143, 183, 249, 467, 835
HapII	CCGG	2 cut(s)	166, 322
HgaI	GACGC	1 cut(s)	865
HhaI	GCGC	2 cut(s)	1168, 1170
Hin1I	GRCGYC	1 cut(s)	506
Hin1II	CATG	9 cut(s)	271, 350, 419, 475, 513, 560, 1089, 1198, 1211
Hin6I	GCGC	2 cut(s)	1166, 1168
HinP1I	GCGC	2 cut(s)	1166, 1168
HinfI	GANTC	7 cut(s)	157, 615, 679, 695, 709, 1090, 1142
HpaII	CCGG	2 cut(s)	166, 322
Hpy166II	GTNNAC	3 cut(s)	412, 772, 931
Hpy188III	TCNNGA	8 cut(s)	88, 127, 161, 257, 967, 1022, 1112, 1213
Hpy8I	GTNNAC	3 cut(s)	412, 772, 931
Hpy99I	CGWCG	1 cut(s)	120
HpyAV	CCTTC	4 cut(s)	173, 413, 1096, 1126
HpyCH4III	ACNGT	4 cut(s)	116, 190, 450, 572
HpyCH4IV	ACGT	4 cut(s)	52, 57, 312, 506
HpyF10VI	GCNNNNNNNGC	6 cut(s)	647, 650, 740, 1154, 1163, 1191
HpyF3I	CTNAG	5 cut(s)	227, 363, 635, 705, 993
HpySE526I	ACGT	4 cut(s)	52, 57, 312, 506
Hsp92I	GRCGYC	1 cut(s)	506
Hsp92II	CATG	9 cut(s)	271, 350, 419, 475, 513, 560, 1089, 1198, 1211
HspAI	GCGC	2 cut(s)	1166, 1168
Ksp22I	TGATCA	2 cut(s)	76, 1114
Kzo9I	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
LmnI	GCTCC	5 cut(s)	26, 129, 223, 764, 916
Lsp1109I	GCAGC	6 cut(s)	51, 631, 637, 653, 659, 752
LweI	GCATC	2 cut(s)	609, 1172
MaeI	CTAG	1 cut(s)	872
MaeII	ACGT	4 cut(s)	52, 57, 312, 506
MaeIII	GTNAC	4 cut(s)	53, 208, 278, 908
MalI	GATC	7 cut(s)	78, 122, 629, 702, 799, 1001, 1116
MboI	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
MboII	GAAGA	5 cut(s)	115, 490, 602, 1009, 1019
MfeI	CAATTG	1 cut(s)	392
MflI	RGATCY	2 cut(s)	120, 999
MhlI	GDGCHC	2 cut(s)	228, 256
MluCI	AATT	9 cut(s)	70, 134, 367, 392, 532, 563, 669, 954, 1125
MlyI	GAGTC	1 cut(s)	718
MmeI	TCCRAC	2 cut(s)	98, 432
Mph1103I	ATGCAT	1 cut(s)	953
MseI	TTAA	2 cut(s)	138, 375
MslI	CAYNNNNRTG	1 cut(s)	272
MspA1I	CMGCKG	2 cut(s)	644, 650
MspI	CCGG	2 cut(s)	166, 322
MspR9I	CCNGG	1 cut(s)	1175
MunI	CAATTG	1 cut(s)	392
MvaI	CCWGG	1 cut(s)	1175
MvnI	CGCG	2 cut(s)	605, 1168
MwoI	GCNNNNNNNGC	6 cut(s)	647, 650, 740, 1154, 1163, 1191
NdeI	CATATG	2 cut(s)	622, 841
NdeII	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
NlaIII	CATG	9 cut(s)	271, 350, 419, 475, 513, 560, 1089, 1198, 1211
NlaIV	GGNNCC	1 cut(s)	173
NmeAIII	GCCGAG	1 cut(s)	275
NmuCI	GTSAC	3 cut(s)	53, 208, 278
NsiI	ATGCAT	1 cut(s)	953
NspI	RCATGY	2 cut(s)	1198, 1211
PauI	GCGCGC	1 cut(s)	1166
PceI	AGGCCT	1 cut(s)	143
PfeI	GAWTC	6 cut(s)	157, 615, 679, 695, 1090, 1142
PflFI	GACNNNGTC	1 cut(s)	206
PinAI	ACCGGT	1 cut(s)	165
PkrI	GCNGC	7 cut(s)	66, 643, 646, 649, 652, 742, 1172
PleI	GAGTC	1 cut(s)	717
PpsI	GAGTC	1 cut(s)	717
Psp124BI	GAGCTC	2 cut(s)	228, 256
Psp6I	CCWGG	1 cut(s)	1173
PspGI	CCWGG	1 cut(s)	1173
PspN4I	GGNNCC	1 cut(s)	173
PspPI	GGNCC	1 cut(s)	172
PstI	CTGCAG	1 cut(s)	649
PstNI	CAGNNNCTG	2 cut(s)	767, 1163
PsuI	RGATCY	2 cut(s)	120, 999
PsyI	GACNNNGTC	1 cut(s)	206
PteI	GCGCGC	1 cut(s)	1166
PvuII	CAGCTG	2 cut(s)	644, 650
RsaI	GTAC	3 cut(s)	233, 297, 870
RsaNI	GTAC	3 cut(s)	232, 296, 869
RseI	CAYNNNNRTG	1 cut(s)	272
SacI	GAGCTC	2 cut(s)	228, 256
SaqAI	TTAA	2 cut(s)	138, 375
SatI	GCNGC	7 cut(s)	65, 642, 645, 648, 651, 741, 1171
Sau3AI	GATC	7 cut(s)	76, 120, 627, 700, 797, 999, 1114
Sau96I	GGNCC	1 cut(s)	172
ScaI	AGTACT	1 cut(s)	870
SchI	GAGTC	1 cut(s)	718
ScrFI	CCNGG	1 cut(s)	1175
SduI	GDGCHC	2 cut(s)	228, 256
SfaNI	GCATC	2 cut(s)	609, 1172
SfcI	CTRYAG	2 cut(s)	499, 645
SinI	GGWCC	1 cut(s)	172
SmiMI	CAYNNNNRTG	1 cut(s)	272
SmlI	CTYRAG	1 cut(s)	257
SmoI	CTYRAG	1 cut(s)	257
Sse9I	AATT	9 cut(s)	70, 134, 367, 392, 532, 563, 669, 954, 1125
SseBI	AGGCCT	1 cut(s)	143
SsiI	CCGC	1 cut(s)	1171
SspMI	CTAG	1 cut(s)	872
SstI	GAGCTC	2 cut(s)	228, 256
StuI	AGGCCT	1 cut(s)	143
StyD4I	CCNGG	1 cut(s)	1173
TaaI	ACNGT	4 cut(s)	116, 190, 450, 572
TaiI	ACGT	4 cut(s)	55, 60, 315, 509
TaqI	TCGA	3 cut(s)	162, 327, 663
TasI	AATT	9 cut(s)	70, 134, 367, 392, 532, 563, 669, 954, 1125
TatI	WGTACW	2 cut(s)	295, 868
TauI	GCSGC	1 cut(s)	1173
TfiI	GAWTC	6 cut(s)	157, 615, 679, 695, 1090, 1142
Tru1I	TTAA	2 cut(s)	138, 375
Tru9I	TTAA	2 cut(s)	138, 375
TscAI	CASTG	1 cut(s)	643
TseFI	GTSAC	3 cut(s)	53, 208, 278
TseI	GCWGC	6 cut(s)	64, 641, 644, 647, 650, 740
Tsp45I	GTSAC	3 cut(s)	53, 208, 278
TspDTI	ATGAA	4 cut(s)	17, 335, 938, 1082
TspRI	CASTG	1 cut(s)	643
Tth111I	GACNNNGTC	1 cut(s)	206
VpaK11BI	GGWCC	1 cut(s)	172
XapI	RAATTY	3 cut(s)	134, 367, 563
XceI	RCATGY	2 cut(s)	1198, 1211
XmiI	GTMKAC	1 cut(s)	930
XspI	CTAG	1 cut(s)	872
ZraI	GACGTC	1 cut(s)	507
ZrmI	AGTACT	1 cut(s)	870
Zsp2I	ATGCAT	1 cut(s)	953

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.