RLG00000008313

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0003946
Physical Location & Seq
Forward (+)
28795789 .. 28801033
5245 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000008313

Sequence Viewer

Length: 3567 bp
ATGAGTAATCCTTACTTAGCAGCTTTTCTCATGAGAAATCCCAGCATTGAAGCTATGCAACACATAGAAGAGATCAGGAGAAAGAAGTTCTCAATAGGGAAGGAAGTACCAAACCCCTTAACTCTTGATCTTCACCATGCTGTGACCAGTCTATCTGCAGAGCTGTATCAGAAAGACATCCATTTCCTCATGGAGCTCATACAGAATGCTGAAGACAATGAGTACAAAGAAGGTGTAGAACCGACTCTGGAGTTTGTGCTGACCGAGAAAGACATAACTGGGACTGGAGCACCAGCTACTCTTTTGGTTTTCAATAATGAGGTTGGCTTTTCCAGGGAGAATATAGACTCCATTTGCAGCATTGGCCGTTCTAGCAAGAAAGGGAAGAGACGTCAGGGCTTTATTGGAGAGAAAGGAATTGGATTTAAAAGCGTGTTTCTCGTGAGTTCACAGCCTCACATATTTAGCAATGCATATCATGTGAAATTCAGGGAAGAACCAAACCAGGTCTGTGGTATTGGTTATATAGTTCCTGAATGGGTTAGCTGTATATGGTATGGCAAGGACTTGCCAACAACTACATTCATACTTCCTCTAAAGCAAGAGAAGGTGGAAGCAGTAAGAGCACAACTGTTGGAGCTGCACCCAGAGATTCTTTTGTTCTTATCCAAAATAAAGCGGCTATATGTACGTGGCTGTGATCCTCAAAAAGCTGATGATGTCTCAACATTATCTATATTCAGTGAGACTGAACATACAGAGTTAAGGAGTAAAACAGCCAATTCTCGTGTTGTGCAACTTTCTGTTAAGGAAAAAATGTGTGATACTGAGCAGTTGTGCAAGTATTACTTGTGGAGAGAGGGGTTTCCAGTGAAACCTGGGAATAGAGTTGAAATAAGGATGGATGTGGAGAAATGGCTGATTACTCTTGCTTTCCCATTTGGAAAAAGGCTGAGAAGAGGAATGTCTCCTGTTGTTCAAGCTGACTTCATCCTTGCTTCTTCGCGCGAATCCATAATTTTGGACAATTCATGGAACATGGGAATTCTTCAATGTGTCCCATCAGCCTTTGTGAATGCATTTCAACATTGTGTGGGACAATTGAACCTCTTTTCTTCTGTAAGTCAGCCATTTGAGTTTTTACCTGCTCAAAACGCGCCAATGCCAGAGTTTAATACAGTACGAGAGTCCATTAGGACTAGGCTGCAAGGTCTAAACATACTGCCCTGTAAAAGATGTTTTGGTGATAGTCTTTCCTCCAAGCTGCCTCGACGTGTAGTACGGATTCAGCCAAAATTTGGGGACCTGGTTGTTAAAATTAAAGCGGAAGGTGCTGTTTTTGGCAGTTCATCTTCATCTTCATTGAAGAGGGTCTTGGATTCATCTCTGGATGTTGAAAAATACAGGGCAATTATGAACTTTCTAGGTGTGGCATATGCTGATGATGATTGGTACACAGCCTGCATCAACTCTTGTAATCTTTTGTTGTTATCAGATCAAGTCCACATTCAACTACTTGGTTTTTTGGCTGATAATGATGCAGAGTTTGACTCAGATAGCATTGAGACCATACCTCTTCTTAAGTATACTGATCGGAAAGGGAGTCCAGCCTTGTGTACAATTAGAACTACAGAAGAGGAACTCAAGATTCGATATGCTATGGGCCTGGAGCTTCACACATGGCTTAGCAAGTGCAATATGGAGTTTGGCTGTCCTGATAATGTGTATTTCTTACCAAATAAGACACTGGAAGCTGTTTTGAATCACCAGAAAAGTCATCCCCCAAAGCGACGTTATAGAAAGAAAAATCACATGGAGAGTTCATCTGTCTGCAATTGGCTGAATAGAAGTGCTGGAGTGATATCTCTTTCAGCGTATGATTATGCTATCTTACTTTTGAATCATGTACCAAAGAAGGAATCTGATGTTGCAGTCAGATTATCCAATTTCCTTTATCTTGCCCACAAGAAAGGCTTCCTCACTGATTATGAAATATCTGATCTTTGTGGTAGGATTCCAATTGTTGATGGATCTGATAAAGTAAGAGTGCAAAGAACTGTAACTTTGGTCCCTTCATCAGGGAGCAAATTGGCCAAATTGTTTGGACTTCAAAATCCATTTGCTGAACAACATTATGTTGATATAGGTGGTGTTTATGCTAAAAGCAGTTTGTTTGTTGGGAAATATACCCCTGAGAAAGAGCTTCTGCATTTTGTTGGCGAGTATAGCAAAGCTATGGACTTACCTGACATGTGTCCTCCAGATGTCAGGTTACTGCACACCAAGAATTCATCCATACCCAAAAACTTCATTGAAAGCATTGAAAATGGAAAGTGGATGAAGACATACTCCGGTTATAAATCTCCACGGGAGGTCATTTTTCCAGATGAAACAGGAAAAGCTCTTTTTGATTTGATGAAGCATGTTCTGGAGGATGTTGCTATTTTGGACCAAGAATTTTATATGAATAAAATCAAACTTTACCAAGATGAACTGAAATTTCTTGGTGTGCGGCTTGGATCTGAGAATATAGGGAAGCTGGTCACCACTCGCTTTTTGTCTCTCGCATCTTCTGGAATGAGCAAAGAATCCACGTTGTCTTTTCTAACTTTCATTAGCTTCTCTAGAGGAAGGAGCATGGTTGATAATGGTTGGTTGGCTGTTATGAAGGAGAAGAAGTGGCTGAAGACGCTCCGAGGTTACAATCCTCCCAACGGGTCTATTCTTTTGCTGCAATCTGAGATAGAAGTTGAAAACTGTTCAAAGGTTACAAATCTTCCGATTGTTGATGAAGCATTCTATGGAAGCAGATTAGGTTCATTCTTATCTGAGTTAAGGCTACTTGGAGTGACATATGATGCGGATGTCGTCCAAAGATTGATTGCAGAGAACGTAAATCTATCTTCGAATCTGTCTTCTATGACTGGTGGTTGTGGTTTGCTGATTCTTAAATGTATTAGATGGTTGGGATCGGGAGCTGCAGGCTTGATTAATAGGATTAAATGCCATCCTTGGGTAAAGACAACTCTAGGTTTCAAAAGCCCTTCGGAAACTGTTCTTCCTGATCCTAAGTGGGTTTCTTTGCTCAATACTCTTCAGGTCCCTGCCATAGATGAATTGTATTATGACAATGCGATTAGGCAATTTGTTGATGAATTGAATGCATTGGGAGTGGTAGTTGATAACACTGGAACAACTGTGATGATAGCTGCTCGGTTTAAATCCCTATTGTCTTCCTCTAGCTTAGATCCTGCCAATGTCATGGCGCTGTTACGTTGCATCAGAGAAATGAATCTAACTATGTCTTTACAACACTCTGAACTGCAGTGGCTGCTGTCTGAAAAATGGTTAAAAACTCGGCATGGATTCAAGACTCCTGATGAATCAATTATTTTCAGCTCTAAATGGGGACAATTGATGTTGTTTGTTGATCTTCCTCTAATTGATGACGTGTACTATGGTGCTGGCATATATAAGTTTAGGGATGAGCTAGAGAAGTTGGGTGCCATCACTGATTTTGCACGAGGAGCTCCATTAGTAGCTAAAGGTCTACACAGTCCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1189

Amino Acids

133.92

Weight (kDa)

8.3

Isoelectric Point (pI)

44.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 56 - 161 1.8e-10 Sacsin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2358
AatII GACGTC 1 cut(s) 394
Acc36I ACCTGC 1 cut(s) 1153
AccB1I GGYRCC 1 cut(s) 3503
AccB7I CCANNNNNTGG 1 cut(s) 1298
AccI GTMKAC 2 cut(s) 1586, 3550
AccII CGCG 3 cut(s) 1006, 1008, 1157
AciI CCGC 4 cut(s) 679, 1325, 2512, 2861
AclWI GGATC 6 cut(s) 695, 2038, 2527, 2977, 3059, 3242
AcoI YGGCCR 2 cut(s) 364, 2091
AcsI RAATTY 6 cut(s) 485, 1044, 1295, 2287, 2456, 2498
AcuI CTGAAG 3 cut(s) 231, 2705, 3080
AcyI GRCGYC 1 cut(s) 391
AfaI GTAC 9 cut(s) 108, 224, 690, 1182, 1281, 1454, 1618, 1908, 3455
AfiI CCNNNNNNNGG 4 cut(s) 1298, 2078, 2714, 3013
AflII CTTAAG 1 cut(s) 1580
AflIII ACRYGT 3 cut(s) 1273, 2250, 3450
AjiI CACGTC 2 cut(s) 1274, 3451
AjnI CCWGG 5 cut(s) 332, 504, 877, 1305, 1665
AjuI GAANNNNNNNTTGG 2 cut(s) 1358, 1390
Alw21I GWGCWC 4 cut(s) 198, 292, 628, 3532
Alw26I GTCTC 6 cut(s) 382, 727, 740, 972, 1559, 2565
AlwI GGATC 6 cut(s) 695, 2038, 2527, 2977, 3059, 3242
AlwNI CAGNNNCTG 1 cut(s) 3331
AoxI GGCC 3 cut(s) 364, 1663, 2091
ApeKI GCWGC 9 cut(s) 20, 357, 640, 1204, 1264, 2731, 2978, 3209, 3331
ApoI RAATTY 6 cut(s) 485, 1044, 1295, 2287, 2456, 2498
AseI ATTAAT 1 cut(s) 2991
Asp700I GAANNNNTTC 2 cut(s) 1973, 3054
AspLEI GCGC 3 cut(s) 1008, 1159, 3268
AspS9I GGNCC 5 cut(s) 1303, 1663, 2068, 2449, 3100
AsuHPI GGTGA 4 cut(s) 125, 1256, 1757, 2536
AsuII TTCGAA 1 cut(s) 2906
AvaII GGWCC 4 cut(s) 1303, 2068, 2449, 3100
BalI TGGCCA 1 cut(s) 2093
BanI GGYRCC 1 cut(s) 3503
BanII GRGCYC 2 cut(s) 198, 3532
BauI CACGAG 3 cut(s) 440, 786, 3522
BbsI GAAGAC 5 cut(s) 219, 2348, 2693, 2907, 3225
Bbv12I GWGCWC 4 cut(s) 198, 292, 628, 3532
BbvI GCAGC 9 cut(s) 32, 369, 627, 1191, 1251, 2718, 2965, 3196, 3318
BccI CCATC 6 cut(s) 895, 1069, 2021, 2955, 3015, 3515
BceAI ACGGC 1 cut(s) 351
BciT130I CCWGG 5 cut(s) 334, 506, 879, 1307, 1667
BcoDI GTCTC 6 cut(s) 382, 727, 740, 972, 1559, 2565
BfaI CTAG 7 cut(s) 372, 1200, 1424, 2625, 3029, 3240, 3491
BfmI CTRYAG 4 cut(s) 156, 1629, 2979, 3323
BfoI RGCGCY 1 cut(s) 3269
BfrI CTTAAG 1 cut(s) 1580
BfuAI ACCTGC 1 cut(s) 1153
BlpI GCTNAGC 1 cut(s) 1685
Bme1390I CCNGG 5 cut(s) 334, 506, 879, 1307, 1667
Bme18I GGWCC 4 cut(s) 1303, 2068, 2449, 3100
BmgBI CACGTC 2 cut(s) 1274, 3451
BmgT120I GGNCC 5 cut(s) 1303, 1663, 2068, 2449, 3100
BmiI GGNNCC 4 cut(s) 1304, 2070, 3102, 3505
BmrFI CCNGG 5 cut(s) 334, 506, 879, 1307, 1667
BmrI ACTGGG 1 cut(s) 288
BmsI GCATC 5 cut(s) 1473, 1528, 2576, 2848, 3288
BmuI ACTGGG 1 cut(s) 288
BoxI GACNNNNGTC 1 cut(s) 2253
BpiI GAAGAC 5 cut(s) 219, 2348, 2693, 2907, 3225
BplI GAGNNNNNCTC 2 cut(s) 1535, 1567
BpmI CTGGAG 6 cut(s) 269, 306, 1688, 1875, 2244, 2450
Bpu1102I GCTNAGC 1 cut(s) 1685
Bpu14I TTCGAA 1 cut(s) 2906
BpuEI CTTGAG 1 cut(s) 1628
BsaAI YACGTR 1 cut(s) 692
BsaHI GRCGYC 1 cut(s) 391
BsaI GGTCTC 1 cut(s) 1559
BsaJI CCNNGG 5 cut(s) 333, 878, 2366, 2695, 3011
BsaWI WCCGGW 1 cut(s) 2351
BsaXI ACNNNNNCTCC 4 cut(s) 2663, 2693, 3162, 3192
Bsc4I CCNNNNNNNGG 4 cut(s) 1298, 2078, 2714, 3013
Bse1I ACTGG 7 cut(s) 147, 283, 289, 869, 1752, 2929, 3193
Bse3DI GCAATG 1 cut(s) 475
BseBI CCWGG 5 cut(s) 334, 506, 879, 1307, 1667
BseDI CCNNGG 5 cut(s) 333, 878, 2366, 2695, 3011
BseLI CCNNNNNNNGG 4 cut(s) 1298, 2078, 2714, 3013
BseMI GCAATG 1 cut(s) 475
BseMII CTCAG 7 cut(s) 819, 944, 1566, 2184, 2514, 2730, 2820
BseNI ACTGG 7 cut(s) 147, 283, 289, 869, 1752, 2929, 3193
BseRI GAGGAG 1 cut(s) 3540
BseXI GCAGC 9 cut(s) 32, 369, 627, 1191, 1251, 2718, 2965, 3196, 3318
BseYI CCCAGC 1 cut(s) 41
BsgI GTGCAG 2 cut(s) 626, 2261
Bsh1236I CGCG 3 cut(s) 1006, 1008, 1157
BshFI GGCC 3 cut(s) 366, 1665, 2093
BshNI GGYRCC 1 cut(s) 3503
BsiHKAI GWGCWC 4 cut(s) 198, 292, 628, 3532
BsiSI CCGG 1 cut(s) 2352
BslFI GGGAC 7 cut(s) 295, 1043, 1110, 1316, 2054, 3086, 3423
BslI CCNNNNNNNGG 4 cut(s) 1298, 2078, 2714, 3013
BsmAI GTCTC 6 cut(s) 382, 727, 740, 972, 1559, 2565
BsmBI CGTCTC 1 cut(s) 382
BsmFI GGGAC 7 cut(s) 295, 1043, 1110, 1316, 2054, 3086, 3423
BsmI GAATGC 4 cut(s) 211, 1081, 2795, 3166
BsnI GGCC 3 cut(s) 366, 1665, 2093
Bso31I GGTCTC 1 cut(s) 1559
Bsp119I TTCGAA 1 cut(s) 2906
Bsp1286I GDGCHC 4 cut(s) 198, 292, 628, 3532
Bsp1407I TGTACA 1 cut(s) 1616
Bsp1720I GCTNAGC 1 cut(s) 1685
BspACI CCGC 4 cut(s) 679, 1325, 2512, 2861
BspANI GGCC 3 cut(s) 366, 1665, 2093
BspCNI CTCAG 7 cut(s) 820, 945, 1565, 2185, 2515, 2731, 2821
BspFNI CGCG 3 cut(s) 1006, 1008, 1157
BspHI TCATGA 1 cut(s) 30
BspLI GGNNCC 4 cut(s) 1304, 2070, 3102, 3505
BspMAI CTGCAG 3 cut(s) 160, 2983, 3327
BspMI ACCTGC 1 cut(s) 1153
BspPI GGATC 6 cut(s) 695, 2038, 2527, 2977, 3059, 3242
BspT104I TTCGAA 1 cut(s) 2906
BspT107I GGYRCC 1 cut(s) 3503
BspTI CTTAAG 1 cut(s) 1580
BspTNI GGTCTC 1 cut(s) 1559
BsrDI GCAATG 1 cut(s) 475
BsrGI TGTACA 1 cut(s) 1616
BsrI ACTGG 7 cut(s) 147, 283, 289, 869, 1752, 2929, 3193
BssECI CCNNGG 5 cut(s) 333, 878, 2366, 2695, 3011
BssNAI GTATAC 1 cut(s) 1587
BssNI GRCGYC 1 cut(s) 391
BssSI CACGAG 3 cut(s) 440, 786, 3522
BssT1I CCWWGG 1 cut(s) 3011
Bst1107I GTATAC 1 cut(s) 1587
Bst2BI CACGAG 3 cut(s) 440, 786, 3522
Bst2UI CCWGG 5 cut(s) 334, 506, 879, 1307, 1667
Bst4CI ACNGT 7 cut(s) 633, 1180, 2059, 2759, 3055, 3199, 3557
Bst6I CTCTTC 7 cut(s) 63, 380, 952, 1361, 1581, 1629, 3099
BstACI GRCGYC 1 cut(s) 391
BstAFI CTTAAG 1 cut(s) 1580
BstAPI GCANNNNNTGC 1 cut(s) 3331
BstAUI TGTACA 1 cut(s) 1616
BstBAI YACGTR 1 cut(s) 692
BstBI TTCGAA 1 cut(s) 2906
BstC8I GCNNGC 3 cut(s) 1462, 2983, 3466
BstDSI CCRYGG 1 cut(s) 2366
BstEII GGTNACC 1 cut(s) 2542
BstENI CCTNNNNNAGG 1 cut(s) 2076
BstFNI CGCG 3 cut(s) 1006, 1008, 1157
BstH2I RGCGCY 1 cut(s) 3269
BstHHI GCGC 3 cut(s) 1008, 1159, 3268
BstMAI GTCTC 6 cut(s) 382, 727, 740, 972, 1559, 2565
BstMWI GCNNNNNNNGC 9 cut(s) 363, 372, 623, 1154, 1331, 2226, 2689, 3331, 3527
BstNI CCWGG 5 cut(s) 334, 506, 879, 1307, 1667
BstNSI RCATGY 2 cut(s) 2254, 2426
BstPAI GACNNNNGTC 1 cut(s) 2253
BstPI GGTNACC 1 cut(s) 2542
BstSCI CCNGG 5 cut(s) 332, 504, 877, 1305, 1665
BstSFI CTRYAG 4 cut(s) 156, 1629, 2979, 3323
BstUI CGCG 3 cut(s) 1006, 1008, 1157
BstV1I GCAGC 9 cut(s) 32, 369, 627, 1191, 1251, 2718, 2965, 3196, 3318
BstV2I GAAGAC 5 cut(s) 219, 2348, 2693, 2907, 3225
BstX2I RGATCY 3 cut(s) 2030, 2519, 3247
BstXI CCANNNNNNTGG 3 cut(s) 512, 1021, 3262
BstYI RGATCY 3 cut(s) 2030, 2519, 3247
BstZ17I GTATAC 1 cut(s) 1587
BsuRI GGCC 3 cut(s) 366, 1665, 2093
BtgI CCRYGG 1 cut(s) 2366
BtrI CACGTC 2 cut(s) 1274, 3451
BtsI GCAGTG 1 cut(s) 3332
BtsIMutI CAGTG 7 cut(s) 748, 876, 1745, 1980, 3186, 3332, 3510
BveI ACCTGC 1 cut(s) 1153
Cac8I GCNNGC 3 cut(s) 1462, 2983, 3466
CaiI CAGNNNCTG 1 cut(s) 3331
CciI TCATGA 1 cut(s) 30
CfoI GCGC 3 cut(s) 1008, 1159, 3268
Cfr13I GGNCC 5 cut(s) 1303, 1663, 2068, 2449, 3100
CseI GACGC 1 cut(s) 2698
CsiI ACCWGGT 2 cut(s) 504, 1305
Csp6I GTAC 9 cut(s) 107, 223, 689, 1181, 1280, 1453, 1617, 1907, 3454
CviQI GTAC 9 cut(s) 107, 223, 689, 1181, 1280, 1453, 1617, 1907, 3454
DraI TTTAAA 2 cut(s) 427, 3220
EaeI YGGCCR 2 cut(s) 364, 2091
Eam1104I CTCTTC 7 cut(s) 63, 380, 952, 1361, 1581, 1629, 3099
EarI CTCTTC 7 cut(s) 63, 380, 952, 1361, 1581, 1629, 3099
Ecl136II GAGCTC 2 cut(s) 196, 3530
Eco130I CCWWGG 1 cut(s) 3011
Eco24I GRGCYC 2 cut(s) 198, 3532
Eco31I GGTCTC 1 cut(s) 1559
Eco32I GATATC 1 cut(s) 1863
Eco47I GGWCC 4 cut(s) 1303, 2068, 2449, 3100
Eco53kI GAGCTC 2 cut(s) 196, 3530
Eco57I CTGAAG 3 cut(s) 231, 2705, 3080
Eco91I GGTNACC 1 cut(s) 2542
EcoICRI GAGCTC 2 cut(s) 196, 3530
EcoNI CCTNNNNNAGG 1 cut(s) 2076
EcoO109I RGGNCCY 2 cut(s) 1303, 3100
EcoO65I GGTNACC 1 cut(s) 2542
EcoRI GAATTC 2 cut(s) 1044, 2287
EcoRII CCWGG 5 cut(s) 332, 504, 877, 1305, 1665
EcoRV GATATC 1 cut(s) 1863
EcoT14I CCWWGG 1 cut(s) 3011
EcoT22I ATGCAT 3 cut(s) 475, 1081, 3166
EcoT38I GRGCYC 2 cut(s) 198, 3532
ErhI CCWWGG 1 cut(s) 3011
Esp3I CGTCTC 1 cut(s) 382
FalI AAGNNNNNCTT 6 cut(s) 833, 865, 1358, 1390, 1958, 1990
FaqI GGGAC 7 cut(s) 295, 1043, 1110, 1316, 2054, 3086, 3423
FauNDI CATATG 2 cut(s) 1435, 2854
FblI GTMKAC 2 cut(s) 1586, 3550
FriOI GRGCYC 2 cut(s) 198, 3532
FspBI CTAG 7 cut(s) 372, 1200, 1424, 2625, 3029, 3240, 3491
GlaI GCGC 3 cut(s) 1007, 1158, 3267
GsaI CCCAGC 1 cut(s) 45
GsuI CTGGAG 6 cut(s) 269, 306, 1688, 1875, 2244, 2450
HaeII RGCGCY 1 cut(s) 3269
HaeIII GGCC 3 cut(s) 366, 1665, 2093
HapII CCGG 1 cut(s) 2352
HgaI GACGC 1 cut(s) 2698
HhaI GCGC 3 cut(s) 1008, 1159, 3268
Hin1I GRCGYC 1 cut(s) 391
Hin6I GCGC 3 cut(s) 1006, 1157, 3266
HinP1I GCGC 3 cut(s) 1006, 1157, 3266
HpaII CCGG 1 cut(s) 2352
HphI GGTGA 4 cut(s) 125, 1256, 1757, 2536
Hpy166II GTNNAC 7 cut(s) 449, 1455, 1504, 1587, 1617, 3454, 3551
Hpy8I GTNNAC 7 cut(s) 449, 1455, 1504, 1587, 1617, 3454, 3551
Hpy99I CGWCG 2 cut(s) 1275, 1794
HpyAV CCTTC 9 cut(s) 94, 224, 601, 1322, 1909, 2082, 2625, 2662, 3054
HpyCH4III ACNGT 7 cut(s) 633, 1180, 2059, 2759, 3055, 3199, 3557
HpyCH4IV ACGT 8 cut(s) 391, 691, 1273, 1792, 2594, 2892, 3274, 3450
HpyF10VI GCNNNNNNNGC 9 cut(s) 363, 372, 623, 1154, 1331, 2226, 2689, 3331, 3527
HpySE526I ACGT 8 cut(s) 391, 691, 1273, 1792, 2594, 2892, 3274, 3450
Hsp92I GRCGYC 1 cut(s) 391
HspAI GCGC 3 cut(s) 1006, 1157, 3266
Lsp1109I GCAGC 9 cut(s) 32, 369, 627, 1191, 1251, 2718, 2965, 3196, 3318
LweI GCATC 5 cut(s) 1473, 1528, 2576, 2848, 3288
MabI ACCWGGT 2 cut(s) 504, 1305
MaeI CTAG 7 cut(s) 372, 1200, 1424, 2625, 3029, 3240, 3491
MaeII ACGT 8 cut(s) 391, 691, 1273, 1792, 2594, 2892, 3274, 3450
MaeIII GTNAC 8 cut(s) 142, 2059, 2271, 2542, 2699, 2767, 2848, 3270
MfeI CAATTG 4 cut(s) 1100, 1834, 2019, 3413
MflI RGATCY 3 cut(s) 2030, 2519, 3247
MhlI GDGCHC 4 cut(s) 198, 292, 628, 3532
MlsI TGGCCA 1 cut(s) 2093
MluNI TGGCCA 1 cut(s) 2093
MlyI GAGTC 6 cut(s) 238, 341, 1196, 1544, 1612, 3367
MmeI TCCRAC 1 cut(s) 615
Mox20I TGGCCA 1 cut(s) 2093
Mph1103I ATGCAT 3 cut(s) 475, 1081, 3166
MroXI GAANNNNTTC 2 cut(s) 1973, 3054
MscI TGGCCA 1 cut(s) 2093
Msp20I TGGCCA 1 cut(s) 2093
MspCI CTTAAG 1 cut(s) 1580
MspI CCGG 1 cut(s) 2352
MspR9I CCNGG 5 cut(s) 334, 506, 879, 1307, 1667
MunI CAATTG 4 cut(s) 1100, 1834, 2019, 3413
Mva1269I GAATGC 4 cut(s) 211, 1081, 2795, 3166
MvaI CCWGG 5 cut(s) 334, 506, 879, 1307, 1667
MvnI CGCG 3 cut(s) 1006, 1008, 1157
MwoI GCNNNNNNNGC 9 cut(s) 363, 372, 623, 1154, 1331, 2226, 2689, 3331, 3527
NdeI CATATG 2 cut(s) 1435, 2854
NlaIV GGNNCC 4 cut(s) 1304, 2070, 3102, 3505
NmeAIII GCCGAG 1 cut(s) 3337
NmuCI GTSAC 3 cut(s) 142, 2542, 2848
NsiI ATGCAT 3 cut(s) 475, 1081, 3166
NspI RCATGY 2 cut(s) 2254, 2426
NspV TTCGAA 1 cut(s) 2906
PagI TCATGA 1 cut(s) 30
PciI ACATGT 1 cut(s) 2250
PctI GAATGC 4 cut(s) 211, 1081, 2795, 3166
PdmI GAANNNNTTC 2 cut(s) 1973, 3054
PflMI CCANNNNNTGG 1 cut(s) 1298
PleI GAGTC 6 cut(s) 238, 341, 1195, 1544, 1611, 3367
PpsI GAGTC 6 cut(s) 238, 341, 1195, 1544, 1611, 3367
Ppu21I YACGTR 1 cut(s) 692
PpuMI RGGWCCY 2 cut(s) 1303, 3100
PscI ACATGT 1 cut(s) 2250
PshAI GACNNNNGTC 1 cut(s) 2253
PshBI ATTAAT 1 cut(s) 2991
PsiI TTATAA 1 cut(s) 2358
Psp124BI GAGCTC 2 cut(s) 198, 3532
Psp5II RGGWCCY 2 cut(s) 1303, 3100
Psp6I CCWGG 5 cut(s) 332, 504, 877, 1305, 1665
PspEI GGTNACC 1 cut(s) 2542
PspFI CCCAGC 1 cut(s) 41
PspGI CCWGG 5 cut(s) 332, 504, 877, 1305, 1665
PspN4I GGNNCC 4 cut(s) 1304, 2070, 3102, 3505
PspPI GGNCC 5 cut(s) 1303, 1663, 2068, 2449, 3100
PspPPI RGGWCCY 2 cut(s) 1303, 3100
PstI CTGCAG 3 cut(s) 160, 2983, 3327
PstNI CAGNNNCTG 1 cut(s) 3331
PsuI RGATCY 3 cut(s) 2030, 2519, 3247
RsaI GTAC 9 cut(s) 108, 224, 690, 1182, 1281, 1454, 1618, 1908, 3455
RsaNI GTAC 9 cut(s) 107, 223, 689, 1181, 1280, 1453, 1617, 1907, 3454
SacI GAGCTC 2 cut(s) 198, 3532
Sau96I GGNCC 5 cut(s) 1303, 1663, 2068, 2449, 3100
SchI GAGTC 6 cut(s) 238, 341, 1196, 1544, 1612, 3367
ScrFI CCNGG 5 cut(s) 334, 506, 879, 1307, 1667
SduI GDGCHC 4 cut(s) 198, 292, 628, 3532
SexAI ACCWGGT 2 cut(s) 504, 1305
SfaNI GCATC 5 cut(s) 1473, 1528, 2576, 2848, 3288
SfcI CTRYAG 4 cut(s) 156, 1629, 2979, 3323
SfuI TTCGAA 1 cut(s) 2906
SinI GGWCC 4 cut(s) 1303, 2068, 2449, 3100
SmlI CTYRAG 2 cut(s) 1580, 1643
SmoI CTYRAG 2 cut(s) 1580, 1643
SsiI CCGC 4 cut(s) 679, 1325, 2512, 2861
SspMI CTAG 7 cut(s) 372, 1200, 1424, 2625, 3029, 3240, 3491
SstI GAGCTC 2 cut(s) 198, 3532
StyD4I CCNGG 5 cut(s) 332, 504, 877, 1305, 1665
StyI CCWWGG 1 cut(s) 3011
TaaI ACNGT 7 cut(s) 633, 1180, 2059, 2759, 3055, 3199, 3557
TaiI ACGT 8 cut(s) 394, 694, 1276, 1795, 2597, 2895, 3277, 3453
TaqI TCGA 3 cut(s) 1270, 1651, 2906
TaqII GACCGA 1 cut(s) 278
TatI WGTACW 3 cut(s) 222, 1616, 3453
TauI GCSGC 2 cut(s) 682, 2515
TscAI CASTG 7 cut(s) 748, 876, 1752, 1987, 3193, 3332, 3517
TseFI GTSAC 3 cut(s) 142, 2542, 2848
TseI GCWGC 9 cut(s) 20, 357, 640, 1204, 1264, 2731, 2978, 3209, 3331
Tsp45I GTSAC 3 cut(s) 142, 2542, 2848
TspGWI ACGGA 1 cut(s) 1297
TspRI CASTG 7 cut(s) 748, 876, 1752, 1987, 3193, 3332, 3517
Van91I CCANNNNNTGG 1 cut(s) 1298
Vha464I CTTAAG 1 cut(s) 1580
VpaK11BI GGWCC 4 cut(s) 1303, 2068, 2449, 3100
VspI ATTAAT 1 cut(s) 2991
XagI CCTNNNNNAGG 1 cut(s) 2076
XapI RAATTY 6 cut(s) 485, 1044, 1295, 2287, 2456, 2498
XbaI TCTAGA 1 cut(s) 2624
XceI RCATGY 2 cut(s) 2254, 2426
XmiI GTMKAC 2 cut(s) 1586, 3550
XmnI GAANNNNTTC 2 cut(s) 1973, 3054
XspI CTAG 7 cut(s) 372, 1200, 1424, 2625, 3029, 3240, 3491
ZraI GACGTC 1 cut(s) 392
Zsp2I ATGCAT 3 cut(s) 475, 1081, 3166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.