Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006012.1

Orthogroup ID

OG0003946

Physical Location & Seq

Genomic Coordinates Reverse (-)

46367 .. 51996

Gene Structure 5630 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006012.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2802 bp

atgctcacaaacttcccatttgtgattcaagctgacttcattcttgcctcttcacgagaatgtatactattagacaatgtatggaacttgggaattcttgaatgtgttccaacagcatttgtcaatgctttcgagtcttgtataagacaactctctctgtttccttcaatgggtcaggtgtttgaatttttacctgctcaagcttcaataattcccttgtttaacaacttaaggcagtgcatcaaagctaggttgcaaggtctaaagatagtgcctcatgaaaggttttctgataacagctctacatttttcttttcacagactcagcatgcagttcggatcttgccaagatttagagatatattggttcaaatggaaagcaaaatggctcttttaattggtttatattcattggagaatgtcttgcattcatctctggaccttgaaaaatacagtgcacctctggactttctaggggtgctatttgctgatgaccaatggtacacaaagtgcataaaatcctctaatcttgtgttgcatgtatcagatgatgtttatgctgatcttcttggcttcgttgctgataatgagacaatattttcttcagagtattttaagagcgtacctcttcttaaatacatcgagcagcaagggaatttgaaattttgttcagttaccaaaaccaccacagaggcgcccaagataagatatgctatggagcttgagactcacacatggctaagtaaatgcagtttgttgttcggatgtcctgatactatgtatttcttgcccaatagcacacaaaaagctctgttaaatagaagttcccatgaaacaaagaaaaaacataggggaagttcttctatctgtagttggctttcataccaggcaggagtgaaatcttgtacagcatatgattatgctcttttgctttgcagtcatgtcttgaataaggaaccaaatttttcggttgaagtggtcagtttcctttatcatgcccacaggaaatgcttccttgatgataataacatatataatctttgccgaaacatcccagtaattgatggggctggccatgtcagaactcgaagaactatagcccttgttcctgcatcagggagcaaatggatgaagttgtttggacctcgaaattcatttgtgggacaaaattatgttgatattgtggatgtttatgctgaaagcagcctgtttctactagactctttgcgtgagaaagagcttctttgttttgtttgcaagtattgcaaagctgtggatttactagagttgtgtcctccagatgtggagccgactgctagcacaaccgccactgttacttcaagcgaagaaaggcgcttgaagaagaagtcaggtcaagggactaccctaacgactgcaccccacgtttctctagacagagaaggtgaacgcaagagaccacaaccaaagcccttacccagtaaggcaaaaagtcctttcccgaaaggcaagagaagaaccctgcttgaagaagaagtcaagtcaagggactaccccaaccgtgcgtctctcaacttcccacgcttgaagaagaagtcaggtcaagggactaccctaacgactgcaccccgcggtgctggcacgcctgcgcaaccacacgctcaaaagagactgtttgcacaccagctgataaagatagctttcggtttaagatgtccttccgaaactattcttcctgatccacaatggggttctttgctaagtgttcttcagatgcctgcaattgatgaaatgtattacaagaatgaaattaggcatttcactgaagaattgaaagcagtgggtgtggttgataatgccacagcagctgagatgattgctgctcagttcagttctctattgtcttcttctaactggcttcctgcaaatgtgatgtcactgttaggttgcatcagagaattgagtcaaactatgtctttacatcaccctgaactaaagtggttgcttcgtgagaagtggttgaaaacacgccatggctataagggtccttgtgaatcaataattttcagctctcaatggggatcaatctcgttgtttgttgatcttccagtcatagacgatgtatattatggtattggcatatataaatacagagatgagttggagaaattgggtgtcatcacggattttgaaggaggactggtgattgtagcaaaaggtctttccagtcccatcgaagatgaactaattactgcagatggtattttatcattgctagaatgcctcaagtgtctgatgacaaagtctcctgatgaatcttcactgagtaactttctcaagaacattgcaaaaagcaagtgtttgaagacccagaatggtattctgaagccatcagatgcaccaaccattgatgaaaacttttacagaactgacatttctgtatacaagaatcagttaagagatattagcgtgaaggtagattctttggatgtttgttctcttctttctgggattcttttttcgctgactgaagcaacttcaataacaaggatttatagcttcctcaacaagttccaatggaatccagaagttctagataaccttaagtctcaggtgtggatacctaccccaaagggtactggcaagtggattaattctcaggattgtgtacttcatgatagcaagcatgtgtttggatcctgcttgttttctcttgacgagttttacaagaaagagtttctccccttttctcttcggcctttggagttgctgaaaaccctacaaccaatgattacttggagttatggaacagctgggctatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

933

Amino Acids

105.17

Weight (kDa)

8.37

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003946)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g12160 FvH4_4g12170
malus_domestica	MD08G1075700.v1.1 MD08G1075800.v1.1 MD08G1076000.v1.1 MD15G1063200.v1.1
prunus_persica	Prupe.1G417200_v2.0.a1
pyrus_communis	pycom08g06260 pycom15g05980
rosa_chinensis	RchiOBHm_Chr4g0412151 RchiOBHm_Chr6g0275121
rosa_laevigata	RLG00000008313 RLG00000008314 RLG00000013495 RLG00000024070
rosa_multiflora	Rmu_sc0003510.1_g000026 Rmu_sc0004221.1_g000010 Rmu_sc0006012.1_g000009 Rmu_sc0011581.1_g000007 Rmu_ssc0000041.1_g000002
rosa_roxburghii	Rroxscaffold_5G00356420 Rroxscaffold_6G00408830
rosa_rugosa	Rorug03G0126700 Rorug04G0105600 Rorug06G0088600.1
rosa_samantha	Rh4AG171800 Rh4BG171000 Rh4BG171100 Rh4CG182600 Rh4DG166200 Rh6AG202600 Rh6DG198100
rosa_wichuraiana	Rw4G014340 Rw6G017590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1629
Acc36I	ACCTGC	1 cut(s)	202
AccB1I	GGYRCC	1 cut(s)	694
AccI	GTMKAC	2 cut(s)	64, 2421
AccII	CGCG	1 cut(s)	1611
AciI	CCGC	3 cut(s)	1326, 1609, 1611
AclWI	GGATC	5 cut(s)	347, 1712, 2068, 2670, 2683
AcoI	YGGCCR	1 cut(s)	1072
AcsI	RAATTY	6 cut(s)	93, 185, 655, 662, 961, 1150
AcuI	CTGAAG	5 cut(s)	588, 1733, 1824, 2384, 2529
AcyI	GRCGYC	1 cut(s)	695
AdeI	CACNNNGTG	1 cut(s)	510
AfaI	GTAC	5 cut(s)	503, 624, 907, 2617, 2649
AfiI	CCNNNNNNNGG	3 cut(s)	170, 1115, 1727
AflII	CTTAAG	2 cut(s)	229, 2582
AjnI	CCWGG	1 cut(s)	885
Alw21I	GWGCWC	1 cut(s)	460
Alw26I	GTCTC	7 cut(s)	584, 719, 1429, 1551, 1642, 2289, 2592
Alw44I	GTGCAC	1 cut(s)	456
AlwI	GGATC	5 cut(s)	347, 1712, 2068, 2670, 2683
AlwNI	CAGNNNCTG	1 cut(s)	1847
AoxI	GGCC	2 cut(s)	1072, 2735
ApaLI	GTGCAC	1 cut(s)	456
ApeKI	GCWGC	4 cut(s)	646, 1203, 1844, 1859
ApoI	RAATTY	6 cut(s)	93, 185, 655, 662, 961, 1150
ArsI	GACNNNNNNTTYG	2 cut(s)	1898, 1930
AseI	ATTAAT	1 cut(s)	2631
Asp700I	GAANNNNTTC	4 cut(s)	105, 859, 1010, 1707
AspLEI	GCGC	3 cut(s)	697, 1356, 1630
AspS9I	GGNCC	3 cut(s)	439, 1142, 2024
AsuHPI	GGTGA	3 cut(s)	1436, 1955, 2194
AsuNHI	GCTAGC	1 cut(s)	1316
AvaII	GGWCC	3 cut(s)	439, 1142, 2024
BaeGI	GKGCMC	1 cut(s)	460
BalI	TGGCCA	1 cut(s)	1074
BamHI	GGATCC	1 cut(s)	2675
BanI	GGYRCC	1 cut(s)	694
BauI	CACGAG	1 cut(s)	54
BbsI	GAAGAC	2 cut(s)	1875, 2351
Bbv12I	GWGCWC	1 cut(s)	460
BbvI	GCAGC	4 cut(s)	658, 1215, 1846, 1856
BccI	CCATC	4 cut(s)	1058, 2219, 2231, 2377
BcgI	CGANNNNNNTGC	2 cut(s)	317, 351
BciT130I	CCWGG	1 cut(s)	887
BciVI	GTATCC	1 cut(s)	2592
BcoDI	GTCTC	7 cut(s)	584, 719, 1429, 1551, 1642, 2289, 2592
BfaI	CTAG	8 cut(s)	249, 473, 1217, 1283, 1317, 1412, 2255, 2573
BfmI	CTRYAG	3 cut(s)	868, 1095, 2232
BfoI	RGCGCY	2 cut(s)	698, 1357
BfrI	CTTAAG	2 cut(s)	229, 2582
BfuAI	ACCTGC	1 cut(s)	202
BfuI	GTATCC	1 cut(s)	2592
BisI	GCNGC	4 cut(s)	647, 1204, 1845, 1860
BlsI	GCNGC	4 cut(s)	648, 1205, 1846, 1861
Bme1390I	CCNGG	1 cut(s)	887
Bme18I	GGWCC	3 cut(s)	439, 1142, 2024
BmgT120I	GGNCC	3 cut(s)	439, 1142, 2024
BmiI	GGNNCC	5 cut(s)	696, 957, 1308, 2025, 2677
BmrFI	CCNGG	1 cut(s)	887
BmrI	ACTGGG	2 cut(s)	1049, 1452
BmsI	GCATC	5 cut(s)	249, 1121, 1743, 1938, 2365
BmtI	GCTAGC	1 cut(s)	1320
BmuI	ACTGGG	2 cut(s)	1049, 1452
BpiI	GAAGAC	2 cut(s)	1875, 2351
BplI	GAGNNNNNCTC	2 cut(s)	610, 642
BpmI	CTGGAG	1 cut(s)	1281
BpuEI	CTTGAG	4 cut(s)	183, 743, 2249, 2300
BsaHI	GRCGYC	1 cut(s)	695
BsaI	GGTCTC	1 cut(s)	1429
BsaJI	CCNNGG	2 cut(s)	1609, 2011
BsaXI	ACNNNNNCTCC	4 cut(s)	2166, 2196, 2269, 2299
Bsc4I	CCNNNNNNNGG	3 cut(s)	170, 1115, 1727
Bse1I	ACTGG	7 cut(s)	1055, 1458, 1898, 2087, 2184, 2205, 2623
Bse3DI	GCAATG	2 cut(s)	2249, 2322
BseBI	CCWGG	1 cut(s)	887
BseDI	CCNNGG	2 cut(s)	1609, 2011
BseGI	GGATG	5 cut(s)	770, 1050, 1134, 1192, 2473
BseLI	CCNNNNNNNGG	3 cut(s)	170, 1115, 1727
BseMI	GCAATG	2 cut(s)	2249, 2322
BseMII	CTCAG	6 cut(s)	338, 1839, 1877, 2294, 2603, 2651
BseNI	ACTGG	7 cut(s)	1055, 1458, 1898, 2087, 2184, 2205, 2623
BseSI	GKGCMC	1 cut(s)	460
BseXI	GCAGC	4 cut(s)	658, 1215, 1846, 1856
BseYI	CCCAGC	1 cut(s)	2792
BsgI	GTGCAG	2 cut(s)	1380, 1587
Bsh1236I	CGCG	1 cut(s)	1611
BshFI	GGCC	2 cut(s)	1074, 2737
BshNI	GGYRCC	1 cut(s)	694
BsiHKAI	GWGCWC	1 cut(s)	460
BslFI	GGGAC	5 cut(s)	1176, 1393, 1541, 1600, 2193
BslI	CCNNNNNNNGG	3 cut(s)	170, 1115, 1727
BsmAI	GTCTC	7 cut(s)	584, 719, 1429, 1551, 1642, 2289, 2592
BsmBI	CGTCTC	1 cut(s)	1551
BsmFI	GGGAC	5 cut(s)	1176, 1393, 1541, 1600, 2193
BsmI	GAATGC	2 cut(s)	427, 2264
BsnI	GGCC	2 cut(s)	1074, 2737
Bso31I	GGTCTC	1 cut(s)	1429
Bsp1286I	GDGCHC	1 cut(s)	460
Bsp1407I	TGTACA	1 cut(s)	905
Bsp143I	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
Bsp19I	CCATGG	1 cut(s)	2011
BspACI	CCGC	3 cut(s)	1326, 1609, 1611
BspANI	GGCC	2 cut(s)	1074, 2737
BspCNI	CTCAG	6 cut(s)	337, 1840, 1876, 2295, 2602, 2650
BspFNI	CGCG	1 cut(s)	1611
BspHI	TCATGA	2 cut(s)	277, 2653
BspLI	GGNNCC	5 cut(s)	696, 957, 1308, 2025, 2677
BspMAI	CTGCAG	1 cut(s)	2236
BspMI	ACCTGC	1 cut(s)	202
BspOI	GCTAGC	1 cut(s)	1320
BspPI	GGATC	5 cut(s)	347, 1712, 2068, 2670, 2683
BspT107I	GGYRCC	1 cut(s)	694
BspTI	CTTAAG	2 cut(s)	229, 2582
BspTNI	GGTCTC	1 cut(s)	1429
BsrDI	GCAATG	2 cut(s)	2249, 2322
BsrGI	TGTACA	1 cut(s)	905
BsrI	ACTGG	7 cut(s)	1055, 1458, 1898, 2087, 2184, 2205, 2623
BssECI	CCNNGG	2 cut(s)	1609, 2011
BssMI	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
BssNAI	GTATAC	2 cut(s)	65, 2422
BssNI	GRCGYC	1 cut(s)	695
BssSI	CACGAG	1 cut(s)	54
BssT1I	CCWWGG	1 cut(s)	2011
Bst1107I	GTATAC	2 cut(s)	65, 2422
Bst2BI	CACGAG	1 cut(s)	54
Bst2UI	CCWGG	1 cut(s)	887
Bst4CI	ACNGT	5 cut(s)	455, 1333, 1541, 1653, 1920
Bst6I	CTCTTC	4 cut(s)	55, 633, 2484, 2736
BstACI	GRCGYC	1 cut(s)	695
BstAFI	CTTAAG	2 cut(s)	229, 2582
BstAPI	GCANNNNNTGC	1 cut(s)	1263
BstAUI	TGTACA	1 cut(s)	905
BstC8I	GCNNGC	8 cut(s)	330, 1072, 1318, 1618, 1622, 1626, 1758, 2663
BstDEI	CTNAG	8 cut(s)	324, 740, 1739, 1848, 1863, 2303, 2589, 2637
BstDSI	CCRYGG	2 cut(s)	1609, 2011
BstENI	CCTNNNNNAGG	1 cut(s)	1113
BstF5I	GGATG	5 cut(s)	770, 1050, 1134, 1192, 2473
BstFNI	CGCG	1 cut(s)	1611
BstH2I	RGCGCY	2 cut(s)	698, 1357
BstHHI	GCGC	3 cut(s)	697, 1356, 1630
BstKTI	GATC	6 cut(s)	342, 565, 1720, 2063, 2083, 2678
BstMAI	GTCTC	7 cut(s)	584, 719, 1429, 1551, 1642, 2289, 2592
BstMBI	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
BstMWI	GCNNNNNNNGC	3 cut(s)	1263, 1617, 1844
BstNI	CCWGG	1 cut(s)	887
BstNSI	RCATGY	3 cut(s)	332, 542, 2669
BstSCI	CCNGG	1 cut(s)	885
BstSFI	CTRYAG	3 cut(s)	868, 1095, 2232
BstSLI	GKGCMC	1 cut(s)	460
BstUI	CGCG	1 cut(s)	1611
BstV1I	GCAGC	4 cut(s)	658, 1215, 1846, 1856
BstV2I	GAAGAC	2 cut(s)	1875, 2351
BstX2I	RGATCY	2 cut(s)	339, 2675
BstYI	RGATCY	2 cut(s)	339, 2675
BstZ17I	GTATAC	2 cut(s)	65, 2422
BsuI	GTATCC	1 cut(s)	2592
BsuRI	GGCC	2 cut(s)	1074, 2737
BtgI	CCRYGG	2 cut(s)	1609, 2011
BtsCI	GGATG	5 cut(s)	770, 1050, 1134, 1192, 2473
BtsI	GCAGTG	2 cut(s)	242, 1824
BtsIMutI	CAGTG	7 cut(s)	242, 460, 1329, 1800, 1824, 1916, 2300
BveI	ACCTGC	1 cut(s)	202
Cac8I	GCNNGC	8 cut(s)	330, 1072, 1318, 1618, 1622, 1626, 1758, 2663
CaiI	CAGNNNCTG	1 cut(s)	1847
CciI	TCATGA	2 cut(s)	277, 2653
CfoI	GCGC	3 cut(s)	697, 1356, 1630
Cfr13I	GGNCC	3 cut(s)	439, 1142, 2024
Cfr42I	CCGCGG	1 cut(s)	1612
CseI	GACGC	1 cut(s)	1533
Csp6I	GTAC	5 cut(s)	502, 623, 906, 2616, 2648
CviQI	GTAC	5 cut(s)	502, 623, 906, 2616, 2648
DdeI	CTNAG	8 cut(s)	324, 740, 1739, 1848, 1863, 2303, 2589, 2637
DinI	GGCGCC	1 cut(s)	696
DpnI	GATC	6 cut(s)	341, 564, 1719, 2062, 2082, 2677
DpnII	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
DraIII	CACNNNGTG	1 cut(s)	510
EaeI	YGGCCR	1 cut(s)	1072
Eam1104I	CTCTTC	4 cut(s)	55, 633, 2484, 2736
EarI	CTCTTC	4 cut(s)	55, 633, 2484, 2736
Eco130I	CCWWGG	1 cut(s)	2011
Eco31I	GGTCTC	1 cut(s)	1429
Eco47I	GGWCC	3 cut(s)	439, 1142, 2024
Eco57I	CTGAAG	5 cut(s)	588, 1733, 1824, 2384, 2529
EcoNI	CCTNNNNNAGG	1 cut(s)	1113
EcoO109I	RGGNCCY	1 cut(s)	2024
EcoRI	GAATTC	1 cut(s)	93
EcoRII	CCWGG	1 cut(s)	885
EcoT14I	CCWWGG	1 cut(s)	2011
EgeI	GGCGCC	1 cut(s)	696
EheI	GGCGCC	1 cut(s)	696
ErhI	CCWWGG	1 cut(s)	2011
Esp3I	CGTCTC	1 cut(s)	1551
FalI	AAGNNNNNCTT	4 cut(s)	1227, 1259, 1681, 1713
FaqI	GGGAC	5 cut(s)	1176, 1393, 1541, 1600, 2193
FauI	CCCGC	1 cut(s)	1616
FauNDI	CATATG	1 cut(s)	913
FblI	GTMKAC	2 cut(s)	64, 2421
Fnu4HI	GCNGC	4 cut(s)	647, 1204, 1845, 1860
FokI	GGATG	5 cut(s)	777, 1037, 1141, 1199, 2480
Fsp4HI	GCNGC	4 cut(s)	647, 1204, 1845, 1860
FspBI	CTAG	8 cut(s)	249, 473, 1217, 1283, 1317, 1412, 2255, 2573
FspI	TGCGCA	1 cut(s)	1629
GlaI	GCGC	3 cut(s)	696, 1355, 1629
GluI	GCNGC	4 cut(s)	647, 1204, 1845, 1860
GsaI	CCCAGC	1 cut(s)	2796
GsuI	CTGGAG	1 cut(s)	1281
HaeII	RGCGCY	2 cut(s)	698, 1357
HaeIII	GGCC	2 cut(s)	1074, 2737
HgaI	GACGC	1 cut(s)	1533
HhaI	GCGC	3 cut(s)	697, 1356, 1630
Hin1I	GRCGYC	1 cut(s)	695
Hin6I	GCGC	3 cut(s)	695, 1354, 1628
HinP1I	GCGC	3 cut(s)	695, 1354, 1628
HindIII	AAGCTT	1 cut(s)	201
HphI	GGTGA	3 cut(s)	1436, 1955, 2194
Hpy166II	GTNNAC	6 cut(s)	65, 458, 504, 1427, 2422, 2648
Hpy8I	GTNNAC	6 cut(s)	65, 458, 504, 1427, 2422, 2648
HpyAV	CCTTC	5 cut(s)	174, 1415, 1707, 2165, 2446
HpyCH4III	ACNGT	5 cut(s)	455, 1333, 1541, 1653, 1920
HpyCH4IV	ACGT	1 cut(s)	1404
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1263, 1617, 1844
HpyF3I	CTNAG	8 cut(s)	324, 740, 1739, 1848, 1863, 2303, 2589, 2637
HpySE526I	ACGT	1 cut(s)	1404
Hsp92I	GRCGYC	1 cut(s)	695
HspAI	GCGC	3 cut(s)	695, 1354, 1628
KasI	GGCGCC	1 cut(s)	694
KspI	CCGCGG	1 cut(s)	1612
Kzo9I	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
LmnI	GCTCC	3 cut(s)	718, 1119, 1306
Lsp1109I	GCAGC	4 cut(s)	658, 1215, 1846, 1856
LweI	GCATC	5 cut(s)	249, 1121, 1743, 1938, 2365
MaeI	CTAG	8 cut(s)	249, 473, 1217, 1283, 1317, 1412, 2255, 2573
MaeII	ACGT	1 cut(s)	1404
MaeIII	GTNAC	4 cut(s)	673, 1333, 1914, 2306
MalI	GATC	6 cut(s)	341, 564, 1719, 2062, 2082, 2677
MboI	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
MfeI	CAATTG	1 cut(s)	1761
MflI	RGATCY	2 cut(s)	339, 2675
MhlI	GDGCHC	1 cut(s)	460
MlsI	TGGCCA	1 cut(s)	1074
MluNI	TGGCCA	1 cut(s)	1074
Mly113I	GGCGCC	1 cut(s)	695
MlyI	GAGTC	5 cut(s)	143, 316, 721, 1214, 1951
MmeI	TCCRAC	2 cut(s)	134, 2121
Mox20I	TGGCCA	1 cut(s)	1074
MroXI	GAANNNNTTC	4 cut(s)	105, 859, 1010, 1707
MscI	TGGCCA	1 cut(s)	1074
MslI	CAYNNNNRTG	1 cut(s)	58
Msp20I	TGGCCA	1 cut(s)	1074
MspA1I	CMGCKG	4 cut(s)	1611, 1666, 1847, 2792
MspCI	CTTAAG	2 cut(s)	229, 2582
MspR9I	CCNGG	1 cut(s)	887
MunI	CAATTG	1 cut(s)	1761
Mva1269I	GAATGC	2 cut(s)	427, 2264
MvaI	CCWGG	1 cut(s)	887
MvnI	CGCG	1 cut(s)	1611
MwoI	GCNNNNNNNGC	3 cut(s)	1263, 1617, 1844
NarI	GGCGCC	1 cut(s)	695
NcoI	CCATGG	1 cut(s)	2011
NdeI	CATATG	1 cut(s)	913
NdeII	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
NheI	GCTAGC	1 cut(s)	1316
NlaIV	GGNNCC	5 cut(s)	696, 957, 1308, 2025, 2677
NmuCI	GTSAC	1 cut(s)	1914
NsbI	TGCGCA	1 cut(s)	1629
NspI	RCATGY	3 cut(s)	332, 542, 2669
PaeI	GCATGC	1 cut(s)	332
PagI	TCATGA	2 cut(s)	277, 2653
PctI	GAATGC	2 cut(s)	427, 2264
PdmI	GAANNNNTTC	4 cut(s)	105, 859, 1010, 1707
PfeI	GAWTC	7 cut(s)	25, 2033, 2294, 2428, 2459, 2491, 2560
PflFI	GACNNNGTC	1 cut(s)	2281
PkrI	GCNGC	4 cut(s)	648, 1205, 1846, 1861
PleI	GAGTC	5 cut(s)	142, 316, 721, 1214, 1950
PluTI	GGCGCC	1 cut(s)	698
PpsI	GAGTC	5 cut(s)	142, 316, 721, 1214, 1950
PpuMI	RGGWCCY	1 cut(s)	2024
PshBI	ATTAAT	1 cut(s)	2631
Psp5II	RGGWCCY	1 cut(s)	2024
Psp6I	CCWGG	1 cut(s)	885
PspFI	CCCAGC	1 cut(s)	2792
PspGI	CCWGG	1 cut(s)	885
PspN4I	GGNNCC	5 cut(s)	696, 957, 1308, 2025, 2677
PspPI	GGNCC	3 cut(s)	439, 1142, 2024
PspPPI	RGGWCCY	1 cut(s)	2024
PstI	CTGCAG	1 cut(s)	2236
PstNI	CAGNNNCTG	1 cut(s)	1847
PsuI	RGATCY	2 cut(s)	339, 2675
PsyI	GACNNNGTC	1 cut(s)	2281
PvuII	CAGCTG	3 cut(s)	1666, 1847, 2792
RsaI	GTAC	5 cut(s)	503, 624, 907, 2617, 2649
RsaNI	GTAC	5 cut(s)	502, 623, 906, 2616, 2648
RseI	CAYNNNNRTG	1 cut(s)	58
SacII	CCGCGG	1 cut(s)	1612
SatI	GCNGC	4 cut(s)	647, 1204, 1845, 1860
Sau3AI	GATC	6 cut(s)	339, 562, 1717, 2060, 2080, 2675
Sau96I	GGNCC	3 cut(s)	439, 1142, 2024
SchI	GAGTC	5 cut(s)	143, 316, 721, 1214, 1951
ScrFI	CCNGG	1 cut(s)	887
SduI	GDGCHC	1 cut(s)	460
SfaNI	GCATC	5 cut(s)	249, 1121, 1743, 1938, 2365
SfcI	CTRYAG	3 cut(s)	868, 1095, 2232
SfoI	GGCGCC	1 cut(s)	696
Sfr303I	CCGCGG	1 cut(s)	1612
SgrBI	CCGCGG	1 cut(s)	1612
SinI	GGWCC	3 cut(s)	439, 1142, 2024
SmiMI	CAYNNNNRTG	1 cut(s)	58
SmlI	CTYRAG	6 cut(s)	198, 229, 722, 2264, 2315, 2582
SmoI	CTYRAG	6 cut(s)	198, 229, 722, 2264, 2315, 2582
SphI	GCATGC	1 cut(s)	332
SsiI	CCGC	3 cut(s)	1326, 1609, 1611
SspDI	GGCGCC	1 cut(s)	694
SspI	AATATT	1 cut(s)	597
SspMI	CTAG	8 cut(s)	249, 473, 1217, 1283, 1317, 1412, 2255, 2573
StyD4I	CCNGG	1 cut(s)	885
StyI	CCWWGG	1 cut(s)	2011
TaaI	ACNGT	5 cut(s)	455, 1333, 1541, 1653, 1920
TaiI	ACGT	1 cut(s)	1407
TaqI	TCGA	5 cut(s)	132, 642, 1087, 1147, 2214
TatI	WGTACW	2 cut(s)	905, 2647
TfiI	GAWTC	7 cut(s)	25, 2033, 2294, 2428, 2459, 2491, 2560
TscAI	CASTG	7 cut(s)	242, 460, 1336, 1807, 1824, 1923, 2307
TseFI	GTSAC	1 cut(s)	1914
TseI	GCWGC	4 cut(s)	646, 1203, 1844, 1859
Tsp45I	GTSAC	1 cut(s)	1914
TspGWI	ACGGA	1 cut(s)	2177
TspRI	CASTG	7 cut(s)	242, 460, 1336, 1807, 1824, 1923, 2307
Tth111I	GACNNNGTC	1 cut(s)	2281
Vha464I	CTTAAG	2 cut(s)	229, 2582
VneI	GTGCAC	1 cut(s)	456
VpaK11BI	GGWCC	3 cut(s)	439, 1142, 2024
VspI	ATTAAT	1 cut(s)	2631
XagI	CCTNNNNNAGG	1 cut(s)	1113
XapI	RAATTY	6 cut(s)	93, 185, 655, 662, 961, 1150
XbaI	TCTAGA	2 cut(s)	1411, 2572
XceI	RCATGY	3 cut(s)	332, 542, 2669
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2772
XmiI	GTMKAC	2 cut(s)	64, 2421
XmnI	GAANNNNTTC	4 cut(s)	105, 859, 1010, 1707
XspI	CTAG	8 cut(s)	249, 473, 1217, 1283, 1317, 1412, 2255, 2573

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.