Rh4BG171100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0003946
Physical Location & Seq
Reverse (-)
30620230 .. 30624253
4024 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG171100.1

Sequence Viewer

Length: 2754 bp
ATGGGAAATCCCAGCATTGAAGCTATGCAACACATAGAAGAGATCAGGACAAAGAAGTTCTCAATAGGGAAGAAAGAACCAAACCCCTTAACTCTTGATCTTCACCATGCTGTGACCAGTCTATCTGCAGAGCTGTATCAGAAAGACATCCATTTCCTGATGGAGCTCATACAGAATGCTGAAGACAATGAGTACAAAGATGGTGTAGAACCGACTCTGGAGTTTGTGCTGACCGAGAAAGACATAAGTCACATAACTGGGACTGGAGCACCAGCTACTCTTTTGGTTTTCAATAATGAGGTTGGCTTTTCCAGGGAGAATATAGACTCCATTTGCAGCATTGGCCGTTCTACCAAGAAAGGGAAGAGACGTCAGGGTTTTATTGGAGACAAAGGAATTGGATTCAAAAGTGTGTTTCTTGTGAGTTCACAACCTCACATATTTAGCAATGGATATCATGTCAAATTCAGGGAAGAACCAAACCAGGTCTGTGGTATTGGTTATATAGTTCCTGAATGGGTTTGGACTGCAGATTTGTCAGTATTAACGATTCAGGCTGTGTATGGGCACGGCAAGGACTTGCCAACAACTACATTCCTACTTCCTCTAAAGCGAGACAAGGTGGAAGCAGTAAGAGCACAACTGTTGGAGCTGCACCCGGAGATTCTCTTGTTCTTATCCAAAATAAAGCGGCTATATGTACGTGGGTGTGATCCTCAAAAAGCTGATGATGTCTCAACATTATCTATATTTAGTGAGACTGAACATACAGAGTTAAGGAGTAAAACAGCCAATTCTCGTGTTGTGCAACTTTCTGTTAAGGAAAAAATGTGTGATACTGAGCAGTTGTGCAAGTATTACTTGTGGAGAGAGGAGTTTCCAGTGAAACCTGGGAATAGAGTTGAAATAAGGATGGATGTGGAGAAATGGGTGATTACTCTTGCTTTCCCATTTGGAAAAAGGCTGAGAAGAGGAACGTCTCCTGTTGGTATATTTGCTTTCCTGCCAACAACAATTGTCACAAACTTCCCCTTTGTAGTTCAAGCTGACTTCATCCTTGCTTCTTCGCGCGAATCCATAATTTTGGACAATTCATGGAACATGGGAATTCTTCAATGTGTCCCATCAGCCTTTGTGAATGCATTTCAACATTGCGTGGGACAACTGAACCTCTTTTCTTCTGTAAGTCAGCCATTTGAGTTTTTACCTGCTCAAAACTCGCCAACGCCAGAGTTTAATACAGTACGAGAGTCCATTAGGACTAGGCTGCAAGGTCTAAACATAGTGCCCTGTAAAAGATTTTTTGGTGATAGTCTTTCCTCCAAGCTGCCTCAACGTGTAGTATGGATCAAGCCAAAATTTAGGGACCTGGTTGTTAAAATTAAAGCGGAAGGTGCTGTTTTTGGCAGTTCATCTTCATCTTCATTGAAGAGGGTCTTGGATTCATCTCTGGATGTTGAAAAATACAGGGAAATTATGAACTTTCTAGGTGTGGCATATGCTGATGATGATTGGTACACAGCCTGCATCAACTCTTGTAATCTTTTGTTGTTATCAGATGAAGTCTACATTGAACTACTTGGTTTTTTGGCTGATAATGATGCAGAGTTTGACTCAGATAGCATTGACACCATACCTCTTCTTAAGTATACTGATCGGAAAGGGAGTCCGGCCTTGTGTACAATTAAAACTACAGAAGAGGAACTCAAGATTCGATATGCTATGGGCCTGGAGCTTCACACATGGCTCAGCAAGTGCAATATGGAGTTTGGCTGTCCTGATAATGTGTATTTCTTACCAAATAAGACACTGGAAGCTGTTTTGAATCACCAGAAAAGTCATCCCCCAAAGCGACGTTATAGAAAGAAAAATCACATGGAGAGTTCATCTGTCTGCAATTGGCTGAATAGAAGTGCTGGAGTGATATCTCTTTCAGCATATGATTATGCTCTCTTACTTTTGAATCATGTATCGAAGAAGGAATCCAATGTTGCAGTCAGATTATCCAATTTCCTTTATCTTGCCCACAAGGAAGGCTTCCTCACTGAATATGAAATATCTGATCTTTGTGGTAGGATTCCAATTGTTGATGGGTCTGATAAAGTAAGAGTGCAAAGAACCGTAACTTTGGTCCCTTCATCAGGGAGCAAATGGGCCAAATTGTTTGGACTTCAAAATCCATTTGCTGAACAACATTATGTTGATATAGGGGATGTTTATGCTAAAAGCAGTTTGTTTCTTGGGAAATCTACCCCTGAGAAAGAGCTTCTGCATTTTGTTGGCGAGTATAGCAAAGCTACGGACTTACCCGACTTGTGTCCTCCAGATGTGGTGTTACAGATCGCATCTCATGAACTCTCGAGTGAGCAGGCCTTTTTACTCCTTGATTGGATCAGGTTACTGCACACCAAGAATTCATCCATACCCAAAAACTTCATTGAAAGCATTGAAAATGGAAAGTGGATGAAGACATTCTCAGGTTATAAATCTCCACGAGAGGTCATTTTTCCAGATGAAACAGGAAAAGCTCTTTTTGATTTGATGAAGCATGTTCTGGAGGATGTTGCTATTTTGGACCAAGAATTTTATATGAATAAAATCAAACTTTACCAAGATGAACTGAAATTTCTTAGTGTGCGGCTTGGATCTGAGAATATAGGGAAGCTGGTCACCACTCGCTTTTTGTCTCTCGCATCTTCTGGAATGAGCAAAGAATCCACATATTCTTTGCTAACTTTCATTAGCTTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

917

Amino Acids

103.81

Weight (kDa)

6.65

Isoelectric Point (pI)

42.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SACS PF25794 46 - 153 9.3e-11 Sacsin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2484
AatII GACGTC 1 cut(s) 373
Acc36I ACCTGC 1 cut(s) 1216
AccI GTMKAC 2 cut(s) 1566, 1649
AccII CGCG 2 cut(s) 1069, 1071
AciI CCGC 3 cut(s) 691, 1388, 2638
AclWI GGATC 4 cut(s) 707, 1355, 2399, 2653
AcoI YGGCCR 1 cut(s) 343
AcsI RAATTY 6 cut(s) 464, 1107, 1358, 2413, 2582, 2624
AcuI CTGAAG 1 cut(s) 201
AcyI GRCGYC 1 cut(s) 370
AfaI GTAC 5 cut(s) 194, 702, 1245, 1517, 1681
AfiI CCNNNNNNNGG 2 cut(s) 360, 2141
AflII CTTAAG 1 cut(s) 1643
AflIII ACRYGT 1 cut(s) 1336
AjnI CCWGG 5 cut(s) 311, 483, 889, 1368, 1728
AjuI GAANNNNNNNTTGG 2 cut(s) 1421, 1453
Alw21I GWGCWC 3 cut(s) 168, 271, 640
Alw26I GTCTC 7 cut(s) 361, 381, 609, 739, 752, 984, 2691
AlwI GGATC 4 cut(s) 707, 1355, 2399, 2653
Ama87I CYCGRG 1 cut(s) 2359
AoxI GGCC 5 cut(s) 343, 1671, 1726, 2154, 2370
ApeKI GCWGC 4 cut(s) 336, 652, 1267, 1327
ApoI RAATTY 6 cut(s) 464, 1107, 1358, 2413, 2582, 2624
ArsI GACNNNNNNTTYG 2 cut(s) 517, 549
Asp700I GAANNNNTTC 1 cut(s) 2471
AspLEI GCGC 1 cut(s) 1071
AspS9I GGNCC 5 cut(s) 1366, 1726, 2131, 2154, 2575
AsuC2I CCSGG 1 cut(s) 659
AsuHPI GGTGA 5 cut(s) 95, 943, 1319, 1820, 2662
AvaI CYCGRG 1 cut(s) 2359
AvaII GGWCC 3 cut(s) 1366, 2131, 2575
BaeGI GKGCMC 2 cut(s) 570, 1290
BanII GRGCYC 1 cut(s) 168
BauI CACGAG 2 cut(s) 798, 2493
BbsI GAAGAC 2 cut(s) 189, 2474
Bbv12I GWGCWC 3 cut(s) 168, 271, 640
BbvI GCAGC 4 cut(s) 348, 639, 1254, 1314
BccI CCATC 5 cut(s) 154, 194, 907, 1132, 2084
BceAI ACGGC 2 cut(s) 330, 586
BciT130I CCWGG 5 cut(s) 313, 485, 891, 1370, 1730
BcnI CCSGG 1 cut(s) 659
BcoDI GTCTC 7 cut(s) 361, 381, 609, 739, 752, 984, 2691
BfaI CTAG 2 cut(s) 1263, 1487
BfmI CTRYAG 3 cut(s) 126, 528, 1692
BfrI CTTAAG 1 cut(s) 1643
BfuAI ACCTGC 1 cut(s) 1216
BisI GCNGC 6 cut(s) 337, 653, 692, 1268, 1328, 2639
BlpI GCTNAGC 1 cut(s) 1748
BlsI GCNGC 6 cut(s) 338, 654, 693, 1269, 1329, 2640
Bme1390I CCNGG 6 cut(s) 313, 485, 659, 891, 1370, 1730
Bme18I GGWCC 3 cut(s) 1366, 2131, 2575
BmeT110I CYCGRG 1 cut(s) 2359
BmgT120I GGNCC 5 cut(s) 1366, 1726, 2131, 2154, 2575
BmiI GGNNCC 2 cut(s) 1367, 2133
BmrFI CCNGG 6 cut(s) 313, 485, 659, 891, 1370, 1730
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 4 cut(s) 1536, 1591, 2354, 2702
BmuI ACTGGG 1 cut(s) 267
BoxI GACNNNNGTC 2 cut(s) 246, 2316
BpiI GAAGAC 2 cut(s) 189, 2474
BplI GAGNNNNNCTC 2 cut(s) 1598, 1630
BpmI CTGGAG 6 cut(s) 239, 285, 1751, 1938, 2307, 2576
Bpu1102I GCTNAGC 1 cut(s) 1748
BpuEI CTTGAG 1 cut(s) 1691
BpuMI CCSGG 1 cut(s) 659
BsaAI YACGTR 1 cut(s) 704
BsaHI GRCGYC 1 cut(s) 370
BsaJI CCNNGG 2 cut(s) 312, 890
Bsc4I CCNNNNNNNGG 2 cut(s) 360, 2141
Bse1I ACTGG 5 cut(s) 117, 262, 268, 881, 1815
Bse3DI GCAATG 2 cut(s) 454, 1150
BseBI CCWGG 5 cut(s) 313, 485, 891, 1370, 1730
BseDI CCNNGG 2 cut(s) 312, 890
BseLI CCNNNNNNNGG 2 cut(s) 360, 2141
BseMI GCAATG 2 cut(s) 454, 1150
BseMII CTCAG 7 cut(s) 831, 956, 1629, 1762, 2247, 2490, 2640
BseNI ACTGG 5 cut(s) 117, 262, 268, 881, 1815
BseRI GAGGAG 1 cut(s) 887
BseSI GKGCMC 2 cut(s) 570, 1290
BseXI GCAGC 4 cut(s) 348, 639, 1254, 1314
BseYI CCCAGC 1 cut(s) 11
BsgI GTGCAG 2 cut(s) 638, 2387
Bsh1236I CGCG 2 cut(s) 1069, 1071
BshFI GGCC 5 cut(s) 345, 1673, 1728, 2156, 2372
BsiHKAI GWGCWC 3 cut(s) 168, 271, 640
BsiHKCI CYCGRG 1 cut(s) 2359
BsiSI CCGG 2 cut(s) 659, 1670
BslFI GGGAC 5 cut(s) 274, 1106, 1173, 1379, 2117
BslI CCNNNNNNNGG 2 cut(s) 360, 2141
BsmAI GTCTC 7 cut(s) 361, 381, 609, 739, 752, 984, 2691
BsmBI CGTCTC 2 cut(s) 361, 984
BsmFI GGGAC 5 cut(s) 274, 1106, 1173, 1379, 2117
BsmI GAATGC 2 cut(s) 181, 1144
BsnI GGCC 5 cut(s) 345, 1673, 1728, 2156, 2372
BsoBI CYCGRG 1 cut(s) 2359
Bsp1286I GDGCHC 5 cut(s) 168, 271, 570, 640, 1290
Bsp1407I TGTACA 1 cut(s) 1679
Bsp143I GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
Bsp1720I GCTNAGC 1 cut(s) 1748
BspACI CCGC 3 cut(s) 691, 1388, 2638
BspANI GGCC 5 cut(s) 345, 1673, 1728, 2156, 2372
BspCNI CTCAG 7 cut(s) 832, 957, 1628, 1761, 2248, 2489, 2641
BspFNI CGCG 2 cut(s) 1069, 1071
BspHI TCATGA 1 cut(s) 2350
BspLI GGNNCC 2 cut(s) 1367, 2133
BspMAI CTGCAG 2 cut(s) 130, 532
BspMI ACCTGC 1 cut(s) 1216
BspPI GGATC 4 cut(s) 707, 1355, 2399, 2653
BspTI CTTAAG 1 cut(s) 1643
BsrDI GCAATG 2 cut(s) 454, 1150
BsrGI TGTACA 1 cut(s) 1679
BsrI ACTGG 5 cut(s) 117, 262, 268, 881, 1815
BssECI CCNNGG 2 cut(s) 312, 890
BssMI GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
BssNAI GTATAC 1 cut(s) 1650
BssNI GRCGYC 1 cut(s) 370
BssSI CACGAG 2 cut(s) 798, 2493
Bst1107I GTATAC 1 cut(s) 1650
Bst2BI CACGAG 2 cut(s) 798, 2493
Bst2UI CCWGG 5 cut(s) 313, 485, 891, 1370, 1730
Bst4CI ACNGT 3 cut(s) 645, 1243, 2122
Bst6I CTCTTC 6 cut(s) 33, 359, 964, 1424, 1644, 1692
BstACI GRCGYC 1 cut(s) 370
BstAFI CTTAAG 1 cut(s) 1643
BstAUI TGTACA 1 cut(s) 1679
BstBAI YACGTR 1 cut(s) 704
BstC8I GCNNGC 2 cut(s) 1525, 2370
BstDEI CTNAG 8 cut(s) 840, 965, 1615, 1748, 2256, 2476, 2630, 2649
BstEII GGTNACC 1 cut(s) 2668
BstENI CCTNNNNNAGG 1 cut(s) 2139
BstFNI CGCG 2 cut(s) 1069, 1071
BstHHI GCGC 1 cut(s) 1071
BstKTI GATC 9 cut(s) 45, 100, 715, 1350, 1657, 2065, 2343, 2394, 2648
BstMAI GTCTC 7 cut(s) 361, 381, 609, 739, 752, 984, 2691
BstMBI GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
BstMWI GCNNNNNNNGC 4 cut(s) 342, 635, 1394, 2289
BstNI CCWGG 5 cut(s) 313, 485, 891, 1370, 1730
BstNSI RCATGY 1 cut(s) 2552
BstPAI GACNNNNGTC 2 cut(s) 246, 2316
BstPI GGTNACC 1 cut(s) 2668
BstSCI CCNGG 6 cut(s) 311, 483, 657, 889, 1368, 1728
BstSFI CTRYAG 3 cut(s) 126, 528, 1692
BstSLI GKGCMC 2 cut(s) 570, 1290
BstUI CGCG 2 cut(s) 1069, 1071
BstV1I GCAGC 4 cut(s) 348, 639, 1254, 1314
BstV2I GAAGAC 2 cut(s) 189, 2474
BstX2I RGATCY 1 cut(s) 2645
BstXI CCANNNNNNTGG 2 cut(s) 491, 1084
BstYI RGATCY 1 cut(s) 2645
BstZ17I GTATAC 1 cut(s) 1650
BsuRI GGCC 5 cut(s) 345, 1673, 1728, 2156, 2372
BtsIMutI CAGTG 3 cut(s) 888, 1808, 2043
BveI ACCTGC 1 cut(s) 1216
Cac8I GCNNGC 2 cut(s) 1525, 2370
CciI TCATGA 1 cut(s) 2350
CfoI GCGC 1 cut(s) 1071
Cfr13I GGNCC 5 cut(s) 1366, 1726, 2131, 2154, 2575
CsiI ACCWGGT 2 cut(s) 483, 1368
Csp6I GTAC 5 cut(s) 193, 701, 1244, 1516, 1680
CviAII CATG 9 cut(s) 107, 458, 1095, 1102, 1743, 1876, 1967, 2351, 2549
CviQI GTAC 5 cut(s) 193, 701, 1244, 1516, 1680
DdeI CTNAG 8 cut(s) 840, 965, 1615, 1748, 2256, 2476, 2630, 2649
DpnI GATC 9 cut(s) 44, 99, 714, 1349, 1656, 2064, 2342, 2393, 2647
DpnII GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
EaeI YGGCCR 1 cut(s) 343
Eam1104I CTCTTC 6 cut(s) 33, 359, 964, 1424, 1644, 1692
EarI CTCTTC 6 cut(s) 33, 359, 964, 1424, 1644, 1692
Ecl136II GAGCTC 1 cut(s) 166
Eco147I AGGCCT 1 cut(s) 2372
Eco24I GRGCYC 1 cut(s) 168
Eco32I GATATC 2 cut(s) 455, 1926
Eco47I GGWCC 3 cut(s) 1366, 2131, 2575
Eco53kI GAGCTC 1 cut(s) 166
Eco57I CTGAAG 1 cut(s) 201
Eco88I CYCGRG 1 cut(s) 2359
Eco91I GGTNACC 1 cut(s) 2668
EcoICRI GAGCTC 1 cut(s) 166
EcoNI CCTNNNNNAGG 1 cut(s) 2139
EcoO109I RGGNCCY 1 cut(s) 1366
EcoO65I GGTNACC 1 cut(s) 2668
EcoRI GAATTC 2 cut(s) 1107, 2413
EcoRII CCWGG 5 cut(s) 311, 483, 889, 1368, 1728
EcoRV GATATC 2 cut(s) 455, 1926
EcoT22I ATGCAT 1 cut(s) 1144
EcoT38I GRGCYC 1 cut(s) 168
Esp3I CGTCTC 2 cut(s) 361, 984
FaeI CATG 9 cut(s) 110, 461, 1098, 1105, 1746, 1879, 1970, 2354, 2552
FalI AAGNNNNNCTT 6 cut(s) 845, 877, 1421, 1453, 2021, 2053
FaqI GGGAC 5 cut(s) 274, 1106, 1173, 1379, 2117
FatI CATG 9 cut(s) 106, 457, 1094, 1101, 1742, 1875, 1966, 2350, 2548
FauNDI CATATG 2 cut(s) 1498, 1939
FblI GTMKAC 2 cut(s) 1566, 1649
Fnu4HI GCNGC 6 cut(s) 337, 653, 692, 1268, 1328, 2639
FriOI GRGCYC 1 cut(s) 168
Fsp4HI GCNGC 6 cut(s) 337, 653, 692, 1268, 1328, 2639
FspBI CTAG 2 cut(s) 1263, 1487
GlaI GCGC 1 cut(s) 1070
GluI GCNGC 6 cut(s) 337, 653, 692, 1268, 1328, 2639
GsaI CCCAGC 1 cut(s) 15
GsuI CTGGAG 6 cut(s) 239, 285, 1751, 1938, 2307, 2576
HaeIII GGCC 5 cut(s) 345, 1673, 1728, 2156, 2372
HapII CCGG 2 cut(s) 659, 1670
HhaI GCGC 1 cut(s) 1071
Hin1I GRCGYC 1 cut(s) 370
Hin1II CATG 9 cut(s) 110, 461, 1098, 1105, 1746, 1879, 1970, 2354, 2552
Hin6I GCGC 1 cut(s) 1069
HinP1I GCGC 1 cut(s) 1069
HpaII CCGG 2 cut(s) 659, 1670
HphI GGTGA 5 cut(s) 95, 943, 1319, 1820, 2662
Hpy166II GTNNAC 5 cut(s) 428, 1518, 1567, 1650, 1680
Hpy188I TCNGA 8 cut(s) 141, 1558, 1618, 1659, 2000, 2062, 2098, 2650
Hpy8I GTNNAC 5 cut(s) 428, 1518, 1567, 1650, 1680
Hpy99I CGWCG 1 cut(s) 1857
HpyAV CCTTC 4 cut(s) 1385, 1972, 2027, 2145
HpyCH4III ACNGT 3 cut(s) 645, 1243, 2122
HpyCH4IV ACGT 5 cut(s) 370, 703, 977, 1336, 1855
HpyF10VI GCNNNNNNNGC 4 cut(s) 342, 635, 1394, 2289
HpyF3I CTNAG 8 cut(s) 840, 965, 1615, 1748, 2256, 2476, 2630, 2649
HpySE526I ACGT 5 cut(s) 370, 703, 977, 1336, 1855
Hsp92I GRCGYC 1 cut(s) 370
Hsp92II CATG 9 cut(s) 110, 461, 1098, 1105, 1746, 1879, 1970, 2354, 2552
HspAI GCGC 1 cut(s) 1069
Kzo9I GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
LmnI GCTCC 5 cut(s) 163, 266, 649, 1732, 2145
Lsp1109I GCAGC 4 cut(s) 348, 639, 1254, 1314
LweI GCATC 4 cut(s) 1536, 1591, 2354, 2702
MabI ACCWGGT 2 cut(s) 483, 1368
MaeI CTAG 2 cut(s) 1263, 1487
MaeII ACGT 5 cut(s) 370, 703, 977, 1336, 1855
MaeIII GTNAC 7 cut(s) 112, 248, 1018, 2122, 2334, 2397, 2668
MalI GATC 9 cut(s) 44, 99, 714, 1349, 1656, 2064, 2342, 2393, 2647
MboI GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
MfeI CAATTG 3 cut(s) 1014, 1897, 2082
MflI RGATCY 1 cut(s) 2645
MhlI GDGCHC 5 cut(s) 168, 271, 570, 640, 1290
MlyI GAGTC 5 cut(s) 208, 320, 1259, 1607, 1675
MmeI TCCRAC 1 cut(s) 627
Mph1103I ATGCAT 1 cut(s) 1144
MroXI GAANNNNTTC 1 cut(s) 2471
MseI TTAA 9 cut(s) 89, 545, 776, 819, 1236, 1377, 1383, 1644, 1686
MspCI CTTAAG 1 cut(s) 1643
MspI CCGG 2 cut(s) 659, 1670
MspR9I CCNGG 6 cut(s) 313, 485, 659, 891, 1370, 1730
MunI CAATTG 3 cut(s) 1014, 1897, 2082
Mva1269I GAATGC 2 cut(s) 181, 1144
MvaI CCWGG 5 cut(s) 313, 485, 891, 1370, 1730
MvnI CGCG 2 cut(s) 1069, 1071
MwoI GCNNNNNNNGC 4 cut(s) 342, 635, 1394, 2289
NciI CCSGG 1 cut(s) 659
NdeI CATATG 2 cut(s) 1498, 1939
NdeII GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
NlaIII CATG 9 cut(s) 110, 461, 1098, 1105, 1746, 1879, 1970, 2354, 2552
NlaIV GGNNCC 2 cut(s) 1367, 2133
NmuCI GTSAC 4 cut(s) 112, 248, 1018, 2668
NsiI ATGCAT 1 cut(s) 1144
NspI RCATGY 1 cut(s) 2552
PaeR7I CTCGAG 1 cut(s) 2359
PagI TCATGA 1 cut(s) 2350
PceI AGGCCT 1 cut(s) 2372
PctI GAATGC 2 cut(s) 181, 1144
PdmI GAANNNNTTC 1 cut(s) 2471
PkrI GCNGC 6 cut(s) 338, 654, 693, 1269, 1329, 2640
PleI GAGTC 5 cut(s) 208, 320, 1258, 1607, 1674
PpsI GAGTC 5 cut(s) 208, 320, 1258, 1607, 1674
Ppu21I YACGTR 1 cut(s) 704
PpuMI RGGWCCY 1 cut(s) 1366
PshAI GACNNNNGTC 2 cut(s) 246, 2316
PsiI TTATAA 1 cut(s) 2484
Psp124BI GAGCTC 1 cut(s) 168
Psp5II RGGWCCY 1 cut(s) 1366
Psp6I CCWGG 5 cut(s) 311, 483, 889, 1368, 1728
PspEI GGTNACC 1 cut(s) 2668
PspFI CCCAGC 1 cut(s) 11
PspGI CCWGG 5 cut(s) 311, 483, 889, 1368, 1728
PspN4I GGNNCC 2 cut(s) 1367, 2133
PspPI GGNCC 5 cut(s) 1366, 1726, 2131, 2154, 2575
PspPPI RGGWCCY 1 cut(s) 1366
PstI CTGCAG 2 cut(s) 130, 532
PsuI RGATCY 1 cut(s) 2645
RsaI GTAC 5 cut(s) 194, 702, 1245, 1517, 1681
RsaNI GTAC 5 cut(s) 193, 701, 1244, 1516, 1680
SacI GAGCTC 1 cut(s) 168
SaqAI TTAA 9 cut(s) 89, 545, 776, 819, 1236, 1377, 1383, 1644, 1686
SatI GCNGC 6 cut(s) 337, 653, 692, 1268, 1328, 2639
Sau3AI GATC 9 cut(s) 42, 97, 712, 1347, 1654, 2062, 2340, 2391, 2645
Sau96I GGNCC 5 cut(s) 1366, 1726, 2131, 2154, 2575
SchI GAGTC 5 cut(s) 208, 320, 1259, 1607, 1675
ScrFI CCNGG 6 cut(s) 313, 485, 659, 891, 1370, 1730
SduI GDGCHC 5 cut(s) 168, 271, 570, 640, 1290
SexAI ACCWGGT 2 cut(s) 483, 1368
SfaNI GCATC 4 cut(s) 1536, 1591, 2354, 2702
SfcI CTRYAG 3 cut(s) 126, 528, 1692
Sfr274I CTCGAG 1 cut(s) 2359
SinI GGWCC 3 cut(s) 1366, 2131, 2575
SlaI CTCGAG 1 cut(s) 2359
SmlI CTYRAG 3 cut(s) 1643, 1706, 2359
SmoI CTYRAG 3 cut(s) 1643, 1706, 2359
SseBI AGGCCT 1 cut(s) 2372
SsiI CCGC 3 cut(s) 691, 1388, 2638
SspMI CTAG 2 cut(s) 1263, 1487
SstI GAGCTC 1 cut(s) 168
StuI AGGCCT 1 cut(s) 2372
StyD4I CCNGG 6 cut(s) 311, 483, 657, 889, 1368, 1728
TaaI ACNGT 3 cut(s) 645, 1243, 2122
TaiI ACGT 5 cut(s) 373, 706, 980, 1339, 1858
TaqI TCGA 3 cut(s) 1714, 1973, 2360
TaqII GACCGA 1 cut(s) 248
TatI WGTACW 2 cut(s) 192, 1679
TauI GCSGC 2 cut(s) 694, 2641
Tru1I TTAA 9 cut(s) 89, 545, 776, 819, 1236, 1377, 1383, 1644, 1686
Tru9I TTAA 9 cut(s) 89, 545, 776, 819, 1236, 1377, 1383, 1644, 1686
TscAI CASTG 3 cut(s) 888, 1815, 2050
TseFI GTSAC 4 cut(s) 112, 248, 1018, 2668
TseI GCWGC 4 cut(s) 336, 652, 1267, 1327
Tsp45I GTSAC 4 cut(s) 112, 248, 1018, 2668
TspGWI ACGGA 1 cut(s) 2315
TspRI CASTG 3 cut(s) 888, 1815, 2050
Vha464I CTTAAG 1 cut(s) 1643
VpaK11BI GGWCC 3 cut(s) 1366, 2131, 2575
XagI CCTNNNNNAGG 1 cut(s) 2139
XapI RAATTY 6 cut(s) 464, 1107, 1358, 2413, 2582, 2624
XceI RCATGY 1 cut(s) 2552
XhoI CTCGAG 1 cut(s) 2359
XmiI GTMKAC 2 cut(s) 1566, 1649
XmnI GAANNNNTTC 1 cut(s) 2471
XspI CTAG 2 cut(s) 1263, 1487
ZraI GACGTC 1 cut(s) 371
Zsp2I ATGCAT 1 cut(s) 1144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.