Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001450

Physical Location & Seq

Genomic Coordinates Forward (+)

10144227 .. 10149474

Gene Structure 5248 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g17700.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2313 bp

ATGCATGGAGCTCATGAAAGGAGAATATCGTCGGGAGGGGAAAACGATCACCGCCACCACGACTCCTCTGACGATGAAGGATTTGAGGTGGAGGACGACGAGCTCATCATGAGGTCTTCGTCAAGACCGAACTGGTGGAAAAGGCGGTTCTCTTTGAAGAGGAGTGAGTCCAGCACTAATGGTACCACTGCTGATCAGAGTACTCATGCCGTGGCCAATGCAAGCAGAAGTGGAACATCATCGTCATCATCAGCCTCTGGTTCGCTTTTCCGTCGAATGGTCATTCATCCCGATAACTGGTGGTACGTGGGTTGGACGCATTTCATTTTGTTATGGGCAGTCTACTCCTCCTTCTTCACACCTCTGGAGTTCGGATTCTTCAGAGGTCTGCCGGAGAATCTGTTCATGCTCGACAGCGTCGGTCAGCTAGCCTTTCTCATCGATATCACCGTCCGCTTCTTCGTGGCCTACCGTGACTTCCATTCCCATCGCATTGTCTACGATCGCCACCTCATCGCTCTCCGGTACCTCAAATCTCGCTTCGTCGTCGATCTCCTTGGTTGCCTCCCCTGGGATGCCATCTACAAGGCCTCTGGGAGAGAAGAGTGGGTGAGGTACTTATTGTGGATACGGCTAAGCCGGGCACAGAGAGTGACCGAGTTTTTTGAGAAACTGGAGAAAGATATCAGAATCAATTACCTGTTTACTAGAATTGCCAAACTTTTTGTTGTTGAACTTTATAGCACACACACAGCTGCTTGCATATTTTACTATCTGGCTACTACTATGCCTCCATCAAGGGAAGGTTACACATGGATTGGGAGTTTGAAGATGGGTGACTATAGCTATGCGCATTTCAGAGAGATTGATCTTTGGAAGCGTTACATAACATCGCTCTATTTTGCAGTTGTTACCATGGCTACTGTTGGTTATGGAGACGTACATGCGGTGAATGCGAGGGAGATGATATTCATCATGTTTTATGTGTCCTTTGATATGATTCTTGGTGCTTATCTGCTCGGTAACATAGCGGCGTTGATAGTGAAAGGATCAAAAACAGAGAAGTTTAGGGACAAGATGACTGACCTTATCAAATACATGAGTAGAAACAGTATTGATAGAGGGATAAGTAAGGAAATTAAAAACCATTTGAGATTACAGTATGACCGCAGCTACACCGAAGCTGCTGTTCTTCAGGATATTCCTGCCTCTATTCGCAGTAAGATTTCACAGAAATTGTATGAGCCATACATCAAAGAAGTTCATCTTTTTAAAGGGTGCTCTACAGGATTCATAAAACAGATTGCAACAAGGATTCATGAGGAGTTTTTTCTTCCAGAAGAAGTTATTATAGAGCAGGGGGATGTAGTTGATCACCTATATATAGTATGCCATGGTGAACTGGAAAAGCAGGGAAGCAGAGAAGATGATGACAATGATGAGCCCCTTGAGCGTTTGAAAACCTATAGCTCATTTGGAGAGGTTTCTTTTCTTTGCAACACTCCCCAACCGTATGCTGTTCAGGTTTGCGAACTGTGTAGAGTTTTACGACTTGATAGACAGTCCTTCAGAGAAATCCTGGAGATATATTTCTTAGATGGCCGGCTTATCTTGGATAACCTGCTTGAGGGAAAAGACTGGAATACTCGGAAAAAGCTTTTGGAATCAGATATCACTCTATACATTGGAAAACATGAAATGGAGTTGGTTATGAAAGTAAACTGCGCTGCTTATGATGGAGATTTTTATCGAGTAAAACGTTTGATTGGAGCTGGTGTAGATCCAAATAAGGTGGATTATGCTGGAAGATCCCCCTTGCATGTTGCTGCATCAAAAGGGTATGAAGATATTACTCGTTTTCTTATTGAAAAAGGGGGAGACGTCAAGATGTCAGATAAGTTTGGGAACACTCCCTTGCTTGAAGCCATCAAAAATGGGCATGATCAAGTTGCTTCTCTACTTGTTCAGGCAGGGGCATCACTTACTATTGAAGATGCTGGTGATTTTCTCTGCGCTACTGTGGCAAGGAGGGATTTGGACCTCGTGAAAAGGCTTTTAGCTAATGACATGAACCCTAATGCAAAAAATTACGATCAGAGATCACCACTACATATAGCTGCTTCAGAAGGGTTGTATACAACGGCAGAGTTACTATTAGAAGCAGGAGCGAGTGTTCTATCAAATGACAGATGGGGGAAAACTCCACTTGATGAAGCCCGCATAGGTGGAAACAAGAAACTGATGCAATTGCTCGAATCTACAAGACTTTCTCAGTTGTCAGAGTTCTCTGATGGTTCTCAAGTAGTCAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015271 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0042592 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662 GO:0098771

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 Ion_trans KHA cNMP_binding

Protein Analysis

771

Amino Acids

88.24

Weight (kDa)

6.32

Isoelectric Point (pI)

42.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	105 - 352	3.7e-24	Ion transport protein
Ion_trans_2	PF07885	292 - 348	5.9e-09	Ion channel
cNMP_binding	PF00027	443 - 528	2.1e-16	Cyclic nucleotide-binding domain
Ank_4	PF13637	575 - 622	1.1e-09	Ankyrin repeats (many copies)
Ank_2	PF12796	576 - 665	1.5e-16	Ankyrin repeats (3 copies)
Ank_5	PF13857	592 - 639	6e-08	Ankyrin repeats (many copies)
Ank_4	PF13637	606 - 654	3.5e-08	Ankyrin repeats (many copies)
Ank_2	PF12796	674 - 751	1.2e-08	Ankyrin repeats (3 copies)
Ank_4	PF13637	675 - 719	1.7e-06	Ankyrin repeats (many copies)
Ank_5	PF13857	685 - 739	1.5e-07	Ankyrin repeats (many copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02850 AT3G02850 AT3G02850 AT5G37500 AT5G37500 AT5G37500 AT5G37500
fragaria_vesca	FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_5g17700 FvH4_5g17700 FvH4_5g17700 FvH4_5g17700
malus_domestica	MD09G1267200.v1.1 MD09G1267300.v1.1 MD14G1239500.v1.1 MD17G1255200.v1.1
prunus_persica	Prupe.3G164900_v2.0.a1 Prupe.3G164900_v2.0.a1 Prupe.5G237000_v2.0.a1 Prupe.5G237000_v2.0.a1
pyrus_communis	pycom09g18000 pycom14g20040 pycom14g20050 pycom17g26330
rosa_chinensis	RchiOBHm_Chr3g0492241 RchiOBHm_Chr7g0177951
rosa_laevigata	RLG00000005488 RLG00000022790
rosa_multiflora	Rmu_co8354969.1_g000001 Rmu_sc0003579.1_g000005 Rmu_sc0017005.1_g000005
rosa_roxburghii	Rroxscaffold_3G00275370 Rroxscaffold_6G00392480
rosa_rugosa	Rorug03G0252500 Rorug03G0252600 Rorug06G0411600.1 Rorug06G0411700.1
rosa_samantha	Rh3AG302600 Rh3BG338200 Rh3CG335700 Rh3DG337800 Rh7AG010400 Rh7BG010600 Rh7CG011000 Rh7DG010700
rosa_wichuraiana	Rw3G026690 Rw7G000890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1884
Acc16I	TGCGCA	1 cut(s)	852
Acc36I	ACCTGC	1 cut(s)	1629
Acc65I	GGTACC	2 cut(s)	182, 525
AccB1I	GGYRCC	2 cut(s)	182, 525
AccI	GTMKAC	3 cut(s)	342, 498, 2135
AciI	CCGC	7 cut(s)	52, 145, 454, 947, 1031, 1168, 2218
AclI	AACGTT	1 cut(s)	1759
AclWI	GGATC	3 cut(s)	1057, 1775, 1803
AcoI	YGGCCR	2 cut(s)	213, 1600
AcuI	CTGAAG	4 cut(s)	364, 1178, 1552, 2106
AcyI	GRCGYC	1 cut(s)	1881
AfaI	GTAC	6 cut(s)	184, 202, 305, 527, 617, 942
AfiI	CCNNNNNNNGG	4 cut(s)	277, 297, 571, 1627
AgsI	TTSAA	7 cut(s)	157, 734, 829, 1459, 1868, 1922, 1991
AjnI	CCWGG	2 cut(s)	569, 1578
AjuI	GAANNNNNNNTTGG	2 cut(s)	1643, 1675
AloI	GAACNNNNNNTCC	4 cut(s)	386, 418, 2157, 2189
Alw21I	GWGCWC	3 cut(s)	13, 105, 1283
Alw26I	GTCTC	2 cut(s)	930, 1872
AlwI	GGATC	3 cut(s)	1057, 1775, 1803
AlwNI	CAGNNNCTG	1 cut(s)	257
AoxI	GGCC	4 cut(s)	213, 465, 588, 1600
ApeKI	GCWGC	6 cut(s)	755, 1170, 1184, 1727, 1826, 2117
Asp700I	GAANNNNTTC	1 cut(s)	401
Asp718I	GGTACC	2 cut(s)	182, 525
AspLEI	GCGC	3 cut(s)	853, 1727, 2015
AspS9I	GGNCC	1 cut(s)	2038
AsuC2I	CCSGG	1 cut(s)	641
AsuHPI	GGTGA	9 cut(s)	41, 439, 622, 848, 961, 1367, 1409, 2012, 2094
AsuNHI	GCTAGC	1 cut(s)	427
AvaII	GGWCC	1 cut(s)	2038
BaeGI	GKGCMC	1 cut(s)	646
BaeI	ACNNNNGTAYC	2 cut(s)	295, 328
BalI	TGGCCA	1 cut(s)	215
BanI	GGYRCC	2 cut(s)	182, 525
BanII	GRGCYC	3 cut(s)	13, 105, 1446
BauI	CACGAG	1 cut(s)	2042
BbsI	GAAGAC	1 cut(s)	108
Bbv12I	GWGCWC	3 cut(s)	13, 105, 1283
BbvI	GCAGC	6 cut(s)	742, 1171, 1182, 1714, 1813, 2104
BccI	CCATC	9 cut(s)	495, 587, 802, 826, 1592, 1730, 1934, 2184, 2285
BceAI	ACGGC	3 cut(s)	194, 647, 2157
BciT130I	CCWGG	2 cut(s)	571, 1580
BciVI	GTATCC	1 cut(s)	621
BclI	TGATCA	3 cut(s)	193, 1372, 1942
BcnI	CCSGG	1 cut(s)	641
BcoDI	GTCTC	2 cut(s)	930, 1872
BfaI	CTAG	2 cut(s)	428, 708
BfmI	CTRYAG	3 cut(s)	841, 1284, 1465
BfuAI	ACCTGC	1 cut(s)	1629
BfuI	GTATCC	1 cut(s)	621
BisI	GCNGC	7 cut(s)	756, 1032, 1171, 1185, 1728, 1827, 2118
BlpI	GCTNAGC	1 cut(s)	635
BlsI	GCNGC	7 cut(s)	757, 1033, 1172, 1186, 1729, 1828, 2119
BmcAI	AGTACT	1 cut(s)	202
Bme1390I	CCNGG	3 cut(s)	571, 641, 1580
Bme18I	GGWCC	1 cut(s)	2038
BmgT120I	GGNCC	1 cut(s)	2038
BmiI	GGNNCC	2 cut(s)	184, 527
BmrFI	CCNGG	3 cut(s)	571, 641, 1580
BmsI	GCATC	5 cut(s)	565, 1838, 1984, 1985, 2232
BmtI	GCTAGC	1 cut(s)	431
BpiI	GAAGAC	1 cut(s)	108
BpmI	CTGGAG	3 cut(s)	386, 695, 1601
Bpu1102I	GCTNAGC	1 cut(s)	635
BpuEI	CTTGAG	3 cut(s)	1469, 1646, 2283
BpuMI	CCSGG	1 cut(s)	641
Bsa29I	ATCGAT	1 cut(s)	441
BsaAI	YACGTR	1 cut(s)	307
BsaBI	GATNNNNATC	2 cut(s)	971, 1746
BsaHI	GRCGYC	1 cut(s)	1881
BsaJI	CCNNGG	6 cut(s)	210, 556, 569, 570, 915, 1393
BsaWI	WCCGGW	1 cut(s)	522
Bsc4I	CCNNNNNNNGG	4 cut(s)	277, 297, 571, 1627
Bse118I	RCCGGY	1 cut(s)	1602
Bse1I	ACTGG	5 cut(s)	137, 302, 678, 1407, 1643
Bse8I	GATNNNNATC	2 cut(s)	971, 1746
BseBI	CCWGG	2 cut(s)	571, 1580
BseCI	ATCGAT	1 cut(s)	441
BseDI	CCNNGG	6 cut(s)	210, 556, 569, 570, 915, 1393
BseGI	GGATG	3 cut(s)	286, 580, 1369
BseJI	GATNNNNATC	2 cut(s)	971, 1746
BseLI	CCNNNNNNNGG	4 cut(s)	277, 297, 571, 1627
BseMII	CTCAG	1 cut(s)	2285
BseNI	ACTGG	5 cut(s)	137, 302, 678, 1407, 1643
BseRI	GAGGAG	4 cut(s)	55, 175, 337, 1337
BseSI	GKGCMC	1 cut(s)	646
BseXI	GCAGC	6 cut(s)	742, 1171, 1182, 1714, 1813, 2104
Bsh1285I	CGRYCG	1 cut(s)	505
BshFI	GGCC	4 cut(s)	215, 467, 590, 1602
BshNI	GGYRCC	2 cut(s)	182, 525
BshVI	ATCGAT	1 cut(s)	441
BsiEI	CGRYCG	1 cut(s)	505
BsiHKAI	GWGCWC	3 cut(s)	13, 105, 1283
BsiSI	CCGG	4 cut(s)	392, 523, 640, 1603
BslFI	GGGAC	1 cut(s)	1085
BslI	CCNNNNNNNGG	4 cut(s)	277, 297, 571, 1627
BsmAI	GTCTC	2 cut(s)	930, 1872
BsmBI	CGTCTC	2 cut(s)	930, 1872
BsmFI	GGGAC	1 cut(s)	1085
BsmI	GAATGC	1 cut(s)	958
BsnI	GGCC	4 cut(s)	215, 467, 590, 1602
Bsp1286I	GDGCHC	5 cut(s)	13, 105, 646, 1283, 1446
Bsp1720I	GCTNAGC	1 cut(s)	635
Bsp19I	CCATGG	2 cut(s)	915, 1393
BspACI	CCGC	7 cut(s)	52, 145, 454, 947, 1031, 1168, 2218
BspANI	GGCC	4 cut(s)	215, 467, 590, 1602
BspCNI	CTCAG	1 cut(s)	2284
BspDI	ATCGAT	1 cut(s)	441
BspHI	TCATGA	3 cut(s)	13, 108, 1318
BspLI	GGNNCC	2 cut(s)	184, 527
BspMI	ACCTGC	1 cut(s)	1629
BspOI	GCTAGC	1 cut(s)	431
BspPI	GGATC	3 cut(s)	1057, 1775, 1803
BspT107I	GGYRCC	2 cut(s)	182, 525
BsrFI	RCCGGY	1 cut(s)	1602
BsrI	ACTGG	5 cut(s)	137, 302, 678, 1407, 1643
BssAI	RCCGGY	1 cut(s)	1602
BssECI	CCNNGG	6 cut(s)	210, 556, 569, 570, 915, 1393
BssNAI	GTATAC	1 cut(s)	2136
BssNI	GRCGYC	1 cut(s)	1881
BssSI	CACGAG	1 cut(s)	2042
BssT1I	CCWWGG	3 cut(s)	556, 915, 1393
Bst1107I	GTATAC	1 cut(s)	2136
Bst2BI	CACGAG	1 cut(s)	2042
Bst2UI	CCWGG	2 cut(s)	571, 1580
Bst4CI	ACNGT	9 cut(s)	451, 473, 925, 1112, 1161, 1512, 1536, 1563, 2020
Bst6I	CTCTTC	2 cut(s)	152, 597
BstACI	GRCGYC	1 cut(s)	1881
BstBAI	YACGTR	1 cut(s)	307
BstC8I	GCNNGC	5 cut(s)	223, 429, 760, 1604, 2218
BstDEI	CTNAG	3 cut(s)	635, 1594, 2271
BstDSI	CCRYGG	3 cut(s)	210, 915, 1393
BstENI	CCTNNNNNAGG	1 cut(s)	1625
BstF5I	GGATG	3 cut(s)	286, 580, 1369
BstHHI	GCGC	3 cut(s)	853, 1727, 2015
BstMAI	GTCTC	2 cut(s)	930, 1872
BstMCI	CGRYCG	1 cut(s)	505
BstMWI	GCNNNNNNNGC	3 cut(s)	953, 1450, 2021
BstNI	CCWGG	2 cut(s)	571, 1580
BstNSI	RCATGY	2 cut(s)	947, 1823
BstSCI	CCNGG	3 cut(s)	569, 639, 1578
BstSFI	CTRYAG	3 cut(s)	841, 1284, 1465
BstSLI	GKGCMC	1 cut(s)	646
BstV1I	GCAGC	6 cut(s)	742, 1171, 1182, 1714, 1813, 2104
BstV2I	GAAGAC	1 cut(s)	108
BstX2I	RGATCY	2 cut(s)	1780, 1808
BstYI	RGATCY	2 cut(s)	1780, 1808
BstZ17I	GTATAC	1 cut(s)	2136
Bsu15I	ATCGAT	1 cut(s)	441
BsuI	GTATCC	1 cut(s)	621
BsuRI	GGCC	4 cut(s)	215, 467, 590, 1602
BsuTUI	ATCGAT	1 cut(s)	441
BtgI	CCRYGG	3 cut(s)	210, 915, 1393
BtgZI	GCGATG	3 cut(s)	473, 499, 876
BtsCI	GGATG	3 cut(s)	286, 580, 1369
BtsI	GCAGTG	1 cut(s)	186
BtsIMutI	CAGTG	1 cut(s)	186
BveI	ACCTGC	1 cut(s)	1629
Cac8I	GCNNGC	5 cut(s)	223, 429, 760, 1604, 2218
CaiI	CAGNNNCTG	1 cut(s)	257
CciI	TCATGA	3 cut(s)	13, 108, 1318
CfoI	GCGC	3 cut(s)	853, 1727, 2015
Cfr10I	RCCGGY	1 cut(s)	1602
Cfr13I	GGNCC	1 cut(s)	2038
ClaI	ATCGAT	1 cut(s)	441
CseI	GACGC	2 cut(s)	325, 406
Csp6I	GTAC	6 cut(s)	183, 201, 304, 526, 616, 941
CspCI	CAANNNNNGTGG	2 cut(s)	1773, 1808
CviQI	GTAC	6 cut(s)	183, 201, 304, 526, 616, 941
DdeI	CTNAG	3 cut(s)	635, 1594, 2271
DraI	TTTAAA	1 cut(s)	1273
EaeI	YGGCCR	2 cut(s)	213, 1600
Eam1104I	CTCTTC	2 cut(s)	152, 597
EarI	CTCTTC	2 cut(s)	152, 597
Ecl136II	GAGCTC	2 cut(s)	11, 103
Eco130I	CCWWGG	3 cut(s)	556, 915, 1393
Eco147I	AGGCCT	1 cut(s)	590
Eco24I	GRGCYC	3 cut(s)	13, 105, 1446
Eco32I	GATATC	3 cut(s)	445, 685, 1672
Eco47I	GGWCC	1 cut(s)	2038
Eco53kI	GAGCTC	2 cut(s)	11, 103
Eco57I	CTGAAG	4 cut(s)	364, 1178, 1552, 2106
EcoICRI	GAGCTC	2 cut(s)	11, 103
EcoNI	CCTNNNNNAGG	1 cut(s)	1625
EcoRII	CCWGG	2 cut(s)	569, 1578
EcoRV	GATATC	3 cut(s)	445, 685, 1672
EcoT14I	CCWWGG	3 cut(s)	556, 915, 1393
EcoT22I	ATGCAT	1 cut(s)	6
EcoT38I	GRGCYC	3 cut(s)	13, 105, 1446
ErhI	CCWWGG	3 cut(s)	556, 915, 1393
Esp3I	CGTCTC	2 cut(s)	930, 1872
FalI	AAGNNNNNCTT	2 cut(s)	1251, 1283
FaqI	GGGAC	1 cut(s)	1085
FauI	CCCGC	1 cut(s)	2225
FbaI	TGATCA	3 cut(s)	193, 1372, 1942
FblI	GTMKAC	3 cut(s)	342, 498, 2135
Fnu4HI	GCNGC	7 cut(s)	756, 1032, 1171, 1185, 1728, 1827, 2118
FokI	GGATG	3 cut(s)	273, 587, 1376
FriOI	GRGCYC	3 cut(s)	13, 105, 1446
Fsp4HI	GCNGC	7 cut(s)	756, 1032, 1171, 1185, 1728, 1827, 2118
FspAI	RTGCGCAY	1 cut(s)	852
FspBI	CTAG	2 cut(s)	428, 708
FspI	TGCGCA	1 cut(s)	852
GlaI	GCGC	3 cut(s)	852, 1726, 2014
GluI	GCNGC	7 cut(s)	756, 1032, 1171, 1185, 1728, 1827, 2118
GsuI	CTGGAG	3 cut(s)	386, 695, 1601
HaeIII	GGCC	4 cut(s)	215, 467, 590, 1602
HapII	CCGG	4 cut(s)	392, 523, 640, 1603
HgaI	GACGC	2 cut(s)	325, 406
HhaI	GCGC	3 cut(s)	853, 1727, 2015
Hin1I	GRCGYC	1 cut(s)	1881
Hin6I	GCGC	3 cut(s)	851, 1725, 2013
HinP1I	GCGC	3 cut(s)	851, 1725, 2013
HindIII	AAGCTT	1 cut(s)	1655
HpaII	CCGG	4 cut(s)	392, 523, 640, 1603
HphI	GGTGA	9 cut(s)	41, 439, 622, 848, 961, 1367, 1409, 2012, 2094
Hpy166II	GTNNAC	6 cut(s)	343, 499, 705, 1400, 1720, 2136
Hpy8I	GTNNAC	6 cut(s)	343, 499, 705, 1400, 1720, 2136
Hpy99I	CGWCG	6 cut(s)	34, 101, 276, 422, 548, 551
HpyAV	CCTTC	5 cut(s)	71, 361, 797, 1576, 2120
HpyCH4III	ACNGT	9 cut(s)	451, 473, 925, 1112, 1161, 1512, 1536, 1563, 2020
HpyCH4IV	ACGT	4 cut(s)	306, 939, 1759, 1881
HpyF10VI	GCNNNNNNNGC	3 cut(s)	953, 1450, 2021
HpyF3I	CTNAG	3 cut(s)	635, 1594, 2271
HpySE526I	ACGT	4 cut(s)	306, 939, 1759, 1881
Hsp92I	GRCGYC	1 cut(s)	1881
HspAI	GCGC	3 cut(s)	851, 1725, 2013
KpnI	GGTACC	2 cut(s)	186, 529
KroI	GCCGGC	1 cut(s)	1602
KroNI	GCCGGC	1 cut(s)	1604
Ksp22I	TGATCA	3 cut(s)	193, 1372, 1942
LmnI	GCTCC	3 cut(s)	8, 1769, 2165
Lsp1109I	GCAGC	6 cut(s)	742, 1171, 1182, 1714, 1813, 2104
LweI	GCATC	5 cut(s)	565, 1838, 1984, 1985, 2232
MaeI	CTAG	2 cut(s)	428, 708
MaeII	ACGT	4 cut(s)	306, 939, 1759, 1881
MaeIII	GTNAC	8 cut(s)	473, 652, 806, 836, 881, 910, 1022, 2148
MfeI	CAATTG	1 cut(s)	2246
MflI	RGATCY	2 cut(s)	1780, 1808
MhlI	GDGCHC	5 cut(s)	13, 105, 646, 1283, 1446
MlsI	TGGCCA	1 cut(s)	215
MluCI	AATT	6 cut(s)	694, 711, 1137, 1235, 2086, 2246
MluNI	TGGCCA	1 cut(s)	215
MlyI	GAGTC	2 cut(s)	56, 176
MmeI	TCCRAC	1 cut(s)	293
Mox20I	TGGCCA	1 cut(s)	215
Mph1103I	ATGCAT	1 cut(s)	6
MroNI	GCCGGC	1 cut(s)	1602
MroXI	GAANNNNTTC	1 cut(s)	401
MscI	TGGCCA	1 cut(s)	215
MseI	TTAA	2 cut(s)	1140, 1272
Msp20I	TGGCCA	1 cut(s)	215
MspA1I	CMGCKG	1 cut(s)	755
MspI	CCGG	4 cut(s)	392, 523, 640, 1603
MspR9I	CCNGG	3 cut(s)	571, 641, 1580
MunI	CAATTG	1 cut(s)	2246
Mva1269I	GAATGC	1 cut(s)	958
MvaI	CCWGG	2 cut(s)	571, 1580
MwoI	GCNNNNNNNGC	3 cut(s)	953, 1450, 2021
NaeI	GCCGGC	1 cut(s)	1604
NciI	CCSGG	1 cut(s)	641
NcoI	CCATGG	2 cut(s)	915, 1393
NgoMIV	GCCGGC	1 cut(s)	1602
NheI	GCTAGC	1 cut(s)	427
NlaIV	GGNNCC	2 cut(s)	184, 527
NmuCI	GTSAC	3 cut(s)	473, 652, 836
NsbI	TGCGCA	1 cut(s)	852
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	2 cut(s)	947, 1823
PagI	TCATGA	3 cut(s)	13, 108, 1318
PasI	CCCWGGG	1 cut(s)	570
PceI	AGGCCT	1 cut(s)	590
PcsI	WCGNNNNNNNCGW	3 cut(s)	125, 447, 1756
PctI	GAATGC	1 cut(s)	958
PdiI	GCCGGC	1 cut(s)	1604
PdmI	GAANNNNTTC	1 cut(s)	401
PfeI	GAWTC	8 cut(s)	375, 397, 690, 1000, 1290, 1315, 1664, 2255
PflFI	GACNNNGTC	1 cut(s)	416
PfoI	TCCNGGA	1 cut(s)	1578
PkrI	GCNGC	7 cut(s)	757, 1033, 1172, 1186, 1729, 1828, 2119
Ple19I	CGATCG	1 cut(s)	505
PleI	GAGTC	2 cut(s)	56, 175
PpsI	GAGTC	2 cut(s)	56, 175
Ppu21I	YACGTR	1 cut(s)	307
Psp124BI	GAGCTC	2 cut(s)	13, 105
Psp1406I	AACGTT	1 cut(s)	1759
Psp6I	CCWGG	2 cut(s)	569, 1578
PspGI	CCWGG	2 cut(s)	569, 1578
PspN4I	GGNNCC	2 cut(s)	184, 527
PspPI	GGNCC	1 cut(s)	2038
PstNI	CAGNNNCTG	1 cut(s)	257
PsuI	RGATCY	2 cut(s)	1780, 1808
PsyI	GACNNNGTC	1 cut(s)	416
PvuI	CGATCG	1 cut(s)	505
PvuII	CAGCTG	1 cut(s)	755
RsaI	GTAC	6 cut(s)	184, 202, 305, 527, 617, 942
RsaNI	GTAC	6 cut(s)	183, 201, 304, 526, 616, 941
SacI	GAGCTC	2 cut(s)	13, 105
SaqAI	TTAA	2 cut(s)	1140, 1272
SatI	GCNGC	7 cut(s)	756, 1032, 1171, 1185, 1728, 1827, 2118
Sau96I	GGNCC	1 cut(s)	2038
ScaI	AGTACT	1 cut(s)	202
SchI	GAGTC	2 cut(s)	56, 176
ScrFI	CCNGG	3 cut(s)	571, 641, 1580
SduI	GDGCHC	5 cut(s)	13, 105, 646, 1283, 1446
SfaNI	GCATC	5 cut(s)	565, 1838, 1984, 1985, 2232
SfcI	CTRYAG	3 cut(s)	841, 1284, 1465
SinI	GGWCC	1 cut(s)	2038
SmlI	CTYRAG	3 cut(s)	1448, 1625, 2298
SmoI	CTYRAG	3 cut(s)	1448, 1625, 2298
Sse9I	AATT	6 cut(s)	694, 711, 1137, 1235, 2086, 2246
SseBI	AGGCCT	1 cut(s)	590
SsiI	CCGC	7 cut(s)	52, 145, 454, 947, 1031, 1168, 2218
SspMI	CTAG	2 cut(s)	428, 708
SstI	GAGCTC	2 cut(s)	13, 105
StuI	AGGCCT	1 cut(s)	590
StyD4I	CCNGG	3 cut(s)	569, 639, 1578
StyI	CCWWGG	3 cut(s)	556, 915, 1393
TaaI	ACNGT	9 cut(s)	451, 473, 925, 1112, 1161, 1512, 1536, 1563, 2020
TaiI	ACGT	4 cut(s)	309, 942, 1762, 1884
TaqI	TCGA	6 cut(s)	274, 411, 441, 549, 1750, 2253
TaqII	GACCGA	3 cut(s)	142, 410, 671
TasI	AATT	6 cut(s)	694, 711, 1137, 1235, 2086, 2246
TatI	WGTACW	1 cut(s)	200
TauI	GCSGC	1 cut(s)	1034
TfiI	GAWTC	8 cut(s)	375, 397, 690, 1000, 1290, 1315, 1664, 2255
Tru1I	TTAA	2 cut(s)	1140, 1272
Tru9I	TTAA	2 cut(s)	1140, 1272
TscAI	CASTG	1 cut(s)	193
TseFI	GTSAC	3 cut(s)	473, 652, 836
TseI	GCWGC	6 cut(s)	755, 1170, 1184, 1727, 1826, 2117
Tsp45I	GTSAC	3 cut(s)	473, 652, 836
TspGWI	ACGGA	1 cut(s)	260
TspRI	CASTG	1 cut(s)	193
Tth111I	GACNNNGTC	1 cut(s)	416
VpaK11BI	GGWCC	1 cut(s)	2038
XagI	CCTNNNNNAGG	1 cut(s)	1625
XceI	RCATGY	2 cut(s)	947, 1823
XmiI	GTMKAC	3 cut(s)	342, 498, 2135
XmnI	GAANNNNTTC	1 cut(s)	401
XspI	CTAG	2 cut(s)	428, 708
ZraI	GACGTC	1 cut(s)	1882
ZrmI	AGTACT	1 cut(s)	202
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.