Rh7CG011000

Potassium channel

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
822562 .. 828425
5864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG011000.1

Sequence Viewer

Length: 1527 bp
ATGCCTCCATCACAGGAAGGTTACACATGGATTGGGAGTTTGAAGATGGGTGACTATAGCTATGCACATTTCAGGGAGATTGATCTTTGGAAGCGTTACATAACTTCGCTCTATTTTGCAGTTGTTACCATGGCCACCGTTGGTTATGGAGAGATACATGCAGTGAATGTGAGGGAGATGATATTCATCATGTTTTATGTGTCTTTTGATATGATTCTTGGTGCTTATCTGCTTGGTAACATTGCGGCATTGATAGTGAAAGGATCAAAAACAGAGAAGTTTAGGGACAAGATGGCGGACCTTATCAAATACATGAATAGAAACCGTATTGATAGAGGGATAAGTAAGGAAATTAAAAACCATTTGAGATTACAGTATGACCGTAGCTACACCGAAGCTGCTGTTCTTCAGGATATCCCTGCCTCTATTCGCAGTAAGATTTCACAGAAATTGTATGAGCCATACATCAAAGAAGTTCATCTTTTTAAAGGGTGCTCTACGGGATTCATAAAACAGATAGCAACCAGAATTCATGAGGAGTTTTTCCTTCCAGCAGAAGTGATTATAGAGCAGGGGGATGTAGTAGATCACCTATATATAGTATGCCATGGTGAACTGGAAAAGCTGGGAAGGGGTGAAGATGATGACAGTGAAGAGCTGTTTGAGCGTTTGCAAACCTATAGCTCATTTGGAGAGGTTTCTTTTCTTTGCAACACTCCCCAGCCGTATGCTGTTCGGGTTTGTCAACTGTGTAGGGTCTTACGACTTGATAGACAGTCCTTCAGAGAAATACTGGAGATATATTTCTTAGATGGCCGGCTTATCTTGGATAACCTGCTTGAGGGAAAAGACTTGTATACCCGGAATAAGCTTTTGGAATCAGATATCACTCTATATATCGGAAAGCATGAAATGGAGTTAGTTATGAAAGTAAATTGTGCTGTCTATGATGGAGATTTTTATCGAGTAAAACGTTTGATTGGAGCTGGTGTAGATCCAAACAAGGTGGATTATGCTGGAAGGTCCCCTTTGCATGTTGCTGCATCAAAAGGGTACGAGGATATTGCTCGTTTTCTTATTGAAAAAGGGGGAGACGTCAAGATGTCAGATAAGTTTGGGAAGACTCCATTGCTTGAAGCCATAAAAAATGGGCATGATCAAGTTGCTTCTTTACTTGTTCAGGCAGGGGCATCACTTACTATTGAAGATGCTGGTGATTTTCTCTGTGCTACTGTAGCAAAGAGGGATTTGGACCTCGTAAAAAGGCTTTTAGCCAATGACATGAATCCAAATGCGAAAAATTATGATCAGAGATCACCACTACATGTAGCTGCTTCAGAAGGGTTATATCCAATGGCAGAGTTCCTATTAGAAGCAGGAGCAAGTGTTCTATCAAAGGACAGATGGGGGAAAACTCCACTTGATGAAGCCCGCATAGGTGGAAGTAACAAGCTAATGCAATTGCTCGAATCTACAAGACTTTCTCAGTTGTCAGAGTTCTCTGATGGTTCTCAAGTAGTGAATTAG

Protein Analysis

508

Amino Acids

57.57

Weight (kDa)

5.87

Isoelectric Point (pI)

41.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ion_trans PF00520 19 - 90 1.2e-08 Ion transport protein
Ion_trans_2 PF07885 30 - 86 1.7e-09 Ion channel
cNMP_binding PF00027 181 - 266 2.3e-16 Cyclic nucleotide-binding domain
Ank_4 PF13637 313 - 360 9.9e-10 Ankyrin repeats (many copies)
Ank_2 PF12796 314 - 403 7.8e-17 Ankyrin repeats (3 copies)
Ank_5 PF13857 330 - 377 2e-08 Ankyrin repeats (many copies)
Ank PF00023 340 - 370 3.8e-06 Ankyrin repeat
Ank_4 PF13637 344 - 392 7.5e-08 Ankyrin repeats (many copies)
Ank_2 PF12796 412 - 489 1.5e-08 Ankyrin repeats (3 copies)
Ank_4 PF13637 413 - 457 1.6e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 423 - 477 2.6e-10 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1098
Acc36I ACCTGC 1 cut(s) 843
AccI GTMKAC 1 cut(s) 857
AciI CCGC 3 cut(s) 245, 296, 1432
AclI AACGTT 1 cut(s) 973
AclWI GGATC 2 cut(s) 271, 989
AcoI YGGCCR 2 cut(s) 132, 814
AcsI RAATTY 1 cut(s) 528
AcuI CTGAAG 3 cut(s) 392, 766, 1320
AcyI GRCGYC 1 cut(s) 1095
AfaI GTAC 1 cut(s) 1055
AfiI CCNNNNNNNGG 1 cut(s) 841
AflIII ACRYGT 1 cut(s) 1324
AgsI TTSAA 4 cut(s) 43, 1082, 1136, 1205
AjuI GAANNNNNNNTTGG 2 cut(s) 857, 889
AloI GAACNNNNNNTCC 2 cut(s) 1371, 1403
Alw21I GWGCWC 1 cut(s) 497
Alw26I GTCTC 1 cut(s) 1086
AlwI GGATC 2 cut(s) 271, 989
AoxI GGCC 2 cut(s) 132, 814
ApeKI GCWGC 3 cut(s) 398, 1040, 1331
ApoI RAATTY 1 cut(s) 528
AspS9I GGNCC 3 cut(s) 298, 1023, 1252
AsuC2I CCSGG 1 cut(s) 862
AsuHPI GGTGA 6 cut(s) 62, 581, 623, 647, 1226, 1308
AvaII GGWCC 3 cut(s) 298, 1023, 1252
BalI TGGCCA 1 cut(s) 134
BbsI GAAGAC 1 cut(s) 1127
Bbv12I GWGCWC 1 cut(s) 497
BbvI GCAGC 3 cut(s) 385, 1027, 1318
BccI CCATC 7 cut(s) 16, 40, 286, 806, 944, 1398, 1499
BceAI ACGGC 1 cut(s) 709
BcgI CGANNNNNNTGC 2 cut(s) 1046, 1080
BclI TGATCA 2 cut(s) 1156, 1306
BcnI CCSGG 1 cut(s) 862
BcoDI GTCTC 1 cut(s) 1086
BfmI CTRYAG 3 cut(s) 55, 679, 1233
BfuAI ACCTGC 1 cut(s) 843
BisI GCNGC 4 cut(s) 246, 399, 1041, 1332
BlsI GCNGC 4 cut(s) 247, 400, 1042, 1333
Bme1390I CCNGG 1 cut(s) 862
Bme18I GGWCC 3 cut(s) 298, 1023, 1252
BmgT120I GGNCC 3 cut(s) 298, 1023, 1252
BmiI GGNNCC 1 cut(s) 1025
BmrFI CCNGG 1 cut(s) 862
BmsI GCATC 3 cut(s) 1052, 1198, 1199
BpiI GAAGAC 1 cut(s) 1127
BpmI CTGGAG 1 cut(s) 815
BpuEI CTTGAG 2 cut(s) 860, 1497
BpuMI CCSGG 1 cut(s) 862
BsaBI GATNNNNATC 2 cut(s) 185, 960
BsaHI GRCGYC 1 cut(s) 1095
BsaJI CCNNGG 2 cut(s) 129, 607
BsaXI ACNNNNNCTCC 4 cut(s) 975, 1005, 1371, 1401
Bsc4I CCNNNNNNNGG 1 cut(s) 841
Bse118I RCCGGY 1 cut(s) 816
Bse1I ACTGG 2 cut(s) 621, 798
Bse3DI GCAATG 2 cut(s) 240, 1127
Bse8I GATNNNNATC 2 cut(s) 185, 960
BseDI CCNNGG 2 cut(s) 129, 607
BseGI GGATG 1 cut(s) 583
BseJI GATNNNNATC 2 cut(s) 185, 960
BseLI CCNNNNNNNGG 1 cut(s) 841
BseMI GCAATG 2 cut(s) 240, 1127
BseMII CTCAG 1 cut(s) 1499
BseNI ACTGG 2 cut(s) 621, 798
BseRI GAGGAG 1 cut(s) 551
BseXI GCAGC 3 cut(s) 385, 1027, 1318
BseYI CCCAGC 2 cut(s) 625, 720
BshFI GGCC 2 cut(s) 134, 816
BsiHKAI GWGCWC 1 cut(s) 497
BsiSI CCGG 2 cut(s) 817, 862
BslFI GGGAC 2 cut(s) 299, 1009
BslI CCNNNNNNNGG 1 cut(s) 841
BsmAI GTCTC 1 cut(s) 1086
BsmBI CGTCTC 1 cut(s) 1086
BsmFI GGGAC 2 cut(s) 299, 1009
BsnI GGCC 2 cut(s) 134, 816
Bsp1286I GDGCHC 1 cut(s) 497
Bsp143I GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
Bsp19I CCATGG 2 cut(s) 129, 607
BspACI CCGC 3 cut(s) 245, 296, 1432
BspANI GGCC 2 cut(s) 134, 816
BspCNI CTCAG 1 cut(s) 1498
BspHI TCATGA 1 cut(s) 532
BspLI GGNNCC 1 cut(s) 1025
BspMI ACCTGC 1 cut(s) 843
BspPI GGATC 2 cut(s) 271, 989
BspQI GCTCTTC 1 cut(s) 648
BsrDI GCAATG 2 cut(s) 240, 1127
BsrFI RCCGGY 1 cut(s) 816
BsrI ACTGG 2 cut(s) 621, 798
BssAI RCCGGY 1 cut(s) 816
BssECI CCNNGG 2 cut(s) 129, 607
BssMI GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
BssNAI GTATAC 1 cut(s) 858
BssNI GRCGYC 1 cut(s) 1095
BssT1I CCWWGG 2 cut(s) 129, 607
Bst1107I GTATAC 1 cut(s) 858
Bst4CI ACNGT 8 cut(s) 139, 326, 375, 383, 650, 750, 777, 1234
Bst6I CTCTTC 1 cut(s) 648
BstACI GRCGYC 1 cut(s) 1095
BstC8I GCNNGC 2 cut(s) 818, 1432
BstDEI CTNAG 2 cut(s) 808, 1485
BstDSI CCRYGG 2 cut(s) 129, 607
BstENI CCTNNNNNAGG 1 cut(s) 839
BstF5I GGATG 1 cut(s) 583
BstKTI GATC 7 cut(s) 85, 266, 589, 997, 1159, 1309, 1316
BstMAI GTCTC 1 cut(s) 1086
BstMBI GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
BstMWI GCNNNNNNNGC 2 cut(s) 664, 1235
BstNSI RCATGY 3 cut(s) 161, 1037, 1328
BstSCI CCNGG 1 cut(s) 860
BstSFI CTRYAG 3 cut(s) 55, 679, 1233
BstV1I GCAGC 3 cut(s) 385, 1027, 1318
BstV2I GAAGAC 1 cut(s) 1127
BstX2I RGATCY 1 cut(s) 994
BstYI RGATCY 1 cut(s) 994
BstZ17I GTATAC 1 cut(s) 858
BsuRI GGCC 2 cut(s) 134, 816
BtgI CCRYGG 2 cut(s) 129, 607
BtsCI GGATG 1 cut(s) 583
BtsI GCAGTG 1 cut(s) 168
BtsIMutI CAGTG 2 cut(s) 168, 655
BveI ACCTGC 1 cut(s) 843
Cac8I GCNNGC 2 cut(s) 818, 1432
CciI TCATGA 1 cut(s) 532
Cfr10I RCCGGY 1 cut(s) 816
Cfr13I GGNCC 3 cut(s) 298, 1023, 1252
Csp6I GTAC 1 cut(s) 1054
CspCI CAANNNNNGTGG 2 cut(s) 987, 1022
CviQI GTAC 1 cut(s) 1054
DdeI CTNAG 2 cut(s) 808, 1485
DpnI GATC 7 cut(s) 84, 265, 588, 996, 1158, 1308, 1315
DpnII GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
DraI TTTAAA 1 cut(s) 487
EaeI YGGCCR 2 cut(s) 132, 814
Eam1104I CTCTTC 1 cut(s) 648
EarI CTCTTC 1 cut(s) 648
EciI GGCGGA 1 cut(s) 311
Eco130I CCWWGG 2 cut(s) 129, 607
Eco32I GATATC 2 cut(s) 415, 886
Eco47I GGWCC 3 cut(s) 298, 1023, 1252
Eco57I CTGAAG 3 cut(s) 392, 766, 1320
EcoNI CCTNNNNNAGG 1 cut(s) 839
EcoO109I RGGNCCY 1 cut(s) 1023
EcoRI GAATTC 1 cut(s) 528
EcoRV GATATC 2 cut(s) 415, 886
EcoT14I CCWWGG 2 cut(s) 129, 607
ErhI CCWWGG 2 cut(s) 129, 607
Esp3I CGTCTC 1 cut(s) 1086
FalI AAGNNNNNCTT 4 cut(s) 465, 497, 1012, 1044
FaqI GGGAC 2 cut(s) 299, 1009
FauI CCCGC 1 cut(s) 1439
FbaI TGATCA 2 cut(s) 1156, 1306
FblI GTMKAC 1 cut(s) 857
Fnu4HI GCNGC 4 cut(s) 246, 399, 1041, 1332
FokI GGATG 1 cut(s) 590
Fsp4HI GCNGC 4 cut(s) 246, 399, 1041, 1332
GluI GCNGC 4 cut(s) 246, 399, 1041, 1332
GsaI CCCAGC 2 cut(s) 629, 724
GsuI CTGGAG 1 cut(s) 815
HaeIII GGCC 2 cut(s) 134, 816
HapII CCGG 2 cut(s) 817, 862
Hin1I GRCGYC 1 cut(s) 1095
HincII GTYRAC 1 cut(s) 746
HindII GTYRAC 1 cut(s) 746
HindIII AAGCTT 1 cut(s) 869
HinfI GANTC 6 cut(s) 214, 504, 878, 1123, 1285, 1469
HpaII CCGG 2 cut(s) 817, 862
HphI GGTGA 6 cut(s) 62, 581, 623, 647, 1226, 1308
Hpy166II GTNNAC 3 cut(s) 614, 746, 858
Hpy188I TCNGA 8 cut(s) 785, 883, 902, 1108, 1311, 1339, 1495, 1504
Hpy188III TCNNGA 3 cut(s) 410, 533, 1099
Hpy8I GTNNAC 3 cut(s) 614, 746, 858
HpyAV CCTTC 6 cut(s) 11, 557, 624, 790, 1014, 1334
HpyCH4III ACNGT 8 cut(s) 139, 326, 375, 383, 650, 750, 777, 1234
HpyCH4IV ACGT 2 cut(s) 973, 1095
HpyCH4V TGCA 8 cut(s) 65, 119, 161, 673, 711, 1033, 1043, 1459
HpyF10VI GCNNNNNNNGC 2 cut(s) 664, 1235
HpyF3I CTNAG 2 cut(s) 808, 1485
HpySE526I ACGT 2 cut(s) 973, 1095
Hsp92I GRCGYC 1 cut(s) 1095
KroI GCCGGC 1 cut(s) 816
KroNI GCCGGC 1 cut(s) 818
Ksp22I TGATCA 2 cut(s) 1156, 1306
Kzo9I GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
LguI GCTCTTC 1 cut(s) 648
LmnI GCTCC 2 cut(s) 983, 1379
Lsp1109I GCAGC 3 cut(s) 385, 1027, 1318
LweI GCATC 3 cut(s) 1052, 1198, 1199
MaeII ACGT 2 cut(s) 973, 1095
MaeIII GTNAC 6 cut(s) 20, 50, 95, 124, 236, 1445
MalI GATC 7 cut(s) 84, 265, 588, 996, 1158, 1308, 1315
MboI GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
MboII GAAGA 6 cut(s) 55, 398, 650, 665, 1132, 1217
MfeI CAATTG 1 cut(s) 1460
MflI RGATCY 1 cut(s) 994
MhlI GDGCHC 1 cut(s) 497
MlsI TGGCCA 1 cut(s) 134
MluCI AATT 7 cut(s) 351, 449, 528, 934, 1300, 1460, 1522
MluNI TGGCCA 1 cut(s) 134
MlyI GAGTC 1 cut(s) 1117
Mox20I TGGCCA 1 cut(s) 134
MroNI GCCGGC 1 cut(s) 816
MscI TGGCCA 1 cut(s) 134
MseI TTAA 2 cut(s) 354, 486
Msp20I TGGCCA 1 cut(s) 134
MspI CCGG 2 cut(s) 817, 862
MspR9I CCNGG 1 cut(s) 862
MunI CAATTG 1 cut(s) 1460
MwoI GCNNNNNNNGC 2 cut(s) 664, 1235
NaeI GCCGGC 1 cut(s) 818
NciI CCSGG 1 cut(s) 862
NcoI CCATGG 2 cut(s) 129, 607
NdeII GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
NgoMIV GCCGGC 1 cut(s) 816
NlaIV GGNNCC 1 cut(s) 1025
NmuCI GTSAC 1 cut(s) 50
NspI RCATGY 3 cut(s) 161, 1037, 1328
PagI TCATGA 1 cut(s) 532
PciI ACATGT 1 cut(s) 1324
PciSI GCTCTTC 1 cut(s) 648
PcsI WCGNNNNNNNCGW 1 cut(s) 970
PdiI GCCGGC 1 cut(s) 818
PfeI GAWTC 5 cut(s) 214, 504, 878, 1285, 1469
PkrI GCNGC 4 cut(s) 247, 400, 1042, 1333
PleI GAGTC 1 cut(s) 1117
PpsI GAGTC 1 cut(s) 1117
PpuMI RGGWCCY 1 cut(s) 1023
PscI ACATGT 1 cut(s) 1324
Psp1406I AACGTT 1 cut(s) 973
Psp5II RGGWCCY 1 cut(s) 1023
PspFI CCCAGC 2 cut(s) 625, 720
PspN4I GGNNCC 1 cut(s) 1025
PspPI GGNCC 3 cut(s) 298, 1023, 1252
PspPPI RGGWCCY 1 cut(s) 1023
PsuI RGATCY 1 cut(s) 994
RsaI GTAC 1 cut(s) 1055
RsaNI GTAC 1 cut(s) 1054
SapI GCTCTTC 1 cut(s) 648
SaqAI TTAA 2 cut(s) 354, 486
SatI GCNGC 4 cut(s) 246, 399, 1041, 1332
Sau3AI GATC 7 cut(s) 82, 263, 586, 994, 1156, 1306, 1313
Sau96I GGNCC 3 cut(s) 298, 1023, 1252
SchI GAGTC 1 cut(s) 1117
ScrFI CCNGG 1 cut(s) 862
SduI GDGCHC 1 cut(s) 497
SfaNI GCATC 3 cut(s) 1052, 1198, 1199
SfcI CTRYAG 3 cut(s) 55, 679, 1233
SinI GGWCC 3 cut(s) 298, 1023, 1252
SmlI CTYRAG 2 cut(s) 839, 1512
SmoI CTYRAG 2 cut(s) 839, 1512
Sse9I AATT 7 cut(s) 351, 449, 528, 934, 1300, 1460, 1522
SsiI CCGC 3 cut(s) 245, 296, 1432
StyD4I CCNGG 1 cut(s) 860
StyI CCWWGG 2 cut(s) 129, 607
TaaI ACNGT 8 cut(s) 139, 326, 375, 383, 650, 750, 777, 1234
TaiI ACGT 2 cut(s) 976, 1098
TaqI TCGA 2 cut(s) 964, 1467
TasI AATT 7 cut(s) 351, 449, 528, 934, 1300, 1460, 1522
TauI GCSGC 1 cut(s) 248
TfiI GAWTC 5 cut(s) 214, 504, 878, 1285, 1469
Tru1I TTAA 2 cut(s) 354, 486
Tru9I TTAA 2 cut(s) 354, 486
TscAI CASTG 2 cut(s) 168, 655
TseFI GTSAC 1 cut(s) 50
TseI GCWGC 3 cut(s) 398, 1040, 1331
Tsp45I GTSAC 1 cut(s) 50
TspDTI ATGAA 9 cut(s) 175, 329, 467, 496, 521, 924, 941, 1298, 1440
TspRI CASTG 2 cut(s) 168, 655
VpaK11BI GGWCC 3 cut(s) 298, 1023, 1252
XagI CCTNNNNNAGG 1 cut(s) 839
XapI RAATTY 1 cut(s) 528
XceI RCATGY 3 cut(s) 161, 1037, 1328
XmiI GTMKAC 1 cut(s) 857
ZraI GACGTC 1 cut(s) 1096
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.