pycom14g20050

Potassium channel

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Forward (+)
21202281 .. 21205133
2853 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g20050.2

Sequence Viewer

Length: 1131 bp
ATGATCGATCGTAGCTACACCGAAGCGGCTGTTCTTCAGGATATTCCAGCCTCCATTCGCAGCAAGATTTCACAGAAATTATATGAACCATACATCAAAGAAGTTTCTCTTTTTAAGGGATGCTCTTTAGGATTCATAAAGCAGATTGCAACCAAAATTCATGAGGAGTTTTTCCTTCCAGGAGAAGTGATCATAGAGCAGGGACAAGCAGTGGATCAATTATACATAGTATGCCATGGGGAGCTGGCGAAGGTGAGAAGGCATGAAGACAGTGAAAGTGAAGAGCTCCTTGAGCGCCTGCAAACCTATAGCCCGTTTGGCGAGGTTTCTTTTCTTTGTAATACTCCCCAGCCATATTCTGTTCGGGCTAGTCAACTGTGCAGGGTCTTGCGACTTGATAAACAATCTTTTAGGGAAATCCTGGATATACATTTCTTAGATGGGCGGATTATCCTAAACAACCTCCTCGAGGGAAAAGACGTGAATACCCGGAACAAGCTTTTGGAATCAGATATCATCCTATATATTGGAAAGCATGAAATGGAGTTAGTTATGAAAGTAAATTCTGCTGCCTATGATGGAGATTTTTATCGAGTAAAATGTTTGATTGGAGCTGGAGCTGATCCCAACAAGATGGACTATGATGGAAGGTCGCCTTTGCATGTTGCTGCATCAAAAGGGTTTGTTGATATCACTCGTTTCCTTATTGAAGAAGGAGCGGCCGCTGAGATGTCAGATAAATATGGGAACACTCCTTTACTTGAAGCCATTAAAAATGGGCACGATGAAGTAGCTTCTTTACTTGTTAAGGCGGGGGCATCACTCGCTGTTGATGATGCCGGTGATTTTCTCTGTACTACGGCAGCAAGGAGGAATATGGAGCTTCTGAAAAGGCTTTTAGCCAATGACATAAACCCGAATGCGAAAAATTATGATCAGCGGTCACCACTTCATGTAGCTGCTTCAGAAGGCTTATATCCAATGGCAGAATTCCTTTTAGAAGCAGGAGCAAGTGTTCTATCAAAGGACAGATGGGGAAGAACTCCACTTGATGAAGCCCGCATAGGTGGAAATAAGAAACTGATCAAATTGCTTGAAGTCGCCAGAGCTTCTCAGTTGTCAGATTTCTAG

Protein Analysis

377

Amino Acids

41.97

Weight (kDa)

5.53

Isoelectric Point (pI)

43.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 467
AccBSI CCGCTC 1 cut(s) 719
AciI CCGC 7 cut(s) 26, 445, 719, 723, 812, 940, 1060
AclWI GGATC 2 cut(s) 222, 617
AcoI YGGCCR 1 cut(s) 720
AcsI RAATTY 3 cut(s) 156, 562, 989
AcuI CTGAAG 2 cut(s) 20, 948
AfaI GTAC 1 cut(s) 856
AfiI CCNNNNNNNGG 1 cut(s) 469
AgsI TTSAA 3 cut(s) 710, 764, 1097
AjiI CACGTC 1 cut(s) 481
AjnI CCWGG 2 cut(s) 178, 420
AjuI GAANNNNNNNTTGG 2 cut(s) 485, 517
AloI GAACNNNNNNTCC 2 cut(s) 999, 1031
Alw21I GWGCWC 1 cut(s) 288
AlwI GGATC 2 cut(s) 222, 617
Ama87I CYCGRG 1 cut(s) 467
AoxI GGCC 1 cut(s) 720
ApeKI GCWGC 5 cut(s) 60, 569, 668, 863, 959
ApoI RAATTY 3 cut(s) 156, 562, 989
AspLEI GCGC 1 cut(s) 297
AsuC2I CCSGG 1 cut(s) 490
AsuHPI GGTGA 3 cut(s) 265, 854, 936
AvaI CYCGRG 1 cut(s) 467
BaeGI GKGCMC 1 cut(s) 783
BanII GRGCYC 1 cut(s) 288
BbsI GAAGAC 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 288
BbvI GCAGC 5 cut(s) 72, 556, 655, 875, 946
BccI CCATC 5 cut(s) 434, 572, 628, 638, 1026
BceAI ACGGC 1 cut(s) 876
BciT130I CCWGG 2 cut(s) 180, 422
BclI TGATCA 3 cut(s) 189, 934, 1083
BcnI CCSGG 1 cut(s) 490
BfaI CTAG 2 cut(s) 369, 1129
BfmI CTRYAG 1 cut(s) 307
BfoI RGCGCY 1 cut(s) 298
BglI GCCNNNNNGGC 1 cut(s) 318
BisI GCNGC 8 cut(s) 27, 61, 570, 669, 720, 723, 864, 960
BlsI GCNGC 8 cut(s) 28, 62, 571, 670, 721, 724, 865, 961
Bme1390I CCNGG 3 cut(s) 180, 422, 490
BmeT110I CYCGRG 1 cut(s) 467
BmgBI CACGTC 1 cut(s) 481
BmrFI CCNGG 3 cut(s) 180, 422, 490
BmsI GCATC 4 cut(s) 110, 680, 826, 827
BpiI GAAGAC 1 cut(s) 273
BpmI CTGGAG 1 cut(s) 636
BpuEI CTTGAG 1 cut(s) 311
BpuMI CCSGG 1 cut(s) 490
Bsa29I ATCGAT 1 cut(s) 6
BsaBI GATNNNNATC 1 cut(s) 588
BsaJI CCNNGG 1 cut(s) 235
BsaXI ACNNNNNCTCC 2 cut(s) 999, 1029
Bsc4I CCNNNNNNNGG 1 cut(s) 469
Bse118I RCCGGY 1 cut(s) 839
Bse8I GATNNNNATC 1 cut(s) 588
BseBI CCWGG 2 cut(s) 180, 422
BseCI ATCGAT 1 cut(s) 6
BseDI CCNNGG 1 cut(s) 235
BseGI GGATG 2 cut(s) 125, 516
BseJI GATNNNNATC 1 cut(s) 588
BseLI CCNNNNNNNGG 1 cut(s) 469
BseMII CTCAG 2 cut(s) 717, 1127
BseRI GAGGAG 2 cut(s) 179, 455
BseSI GKGCMC 1 cut(s) 783
BseX3I CGGCCG 1 cut(s) 720
BseXI GCAGC 5 cut(s) 72, 556, 655, 875, 946
BseYI CCCAGC 1 cut(s) 348
BsgI GTGCAG 1 cut(s) 400
Bsh1285I CGRYCG 2 cut(s) 10, 723
BshFI GGCC 1 cut(s) 722
BshVI ATCGAT 1 cut(s) 6
BsiEI CGRYCG 2 cut(s) 10, 723
BsiHKAI GWGCWC 1 cut(s) 288
BsiHKCI CYCGRG 1 cut(s) 467
BsiSI CCGG 2 cut(s) 490, 840
BslFI GGGAC 1 cut(s) 216
BslI CCNNNNNNNGG 1 cut(s) 469
BsmFI GGGAC 1 cut(s) 216
BsmI GAATGC 1 cut(s) 925
BsnI GGCC 1 cut(s) 722
BsoBI CYCGRG 1 cut(s) 467
Bsp1286I GDGCHC 2 cut(s) 288, 783
Bsp143I GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
Bsp19I CCATGG 1 cut(s) 235
BspACI CCGC 7 cut(s) 26, 445, 719, 723, 812, 940, 1060
BspANI GGCC 1 cut(s) 722
BspCNI CTCAG 2 cut(s) 718, 1126
BspDI ATCGAT 1 cut(s) 6
BspHI TCATGA 1 cut(s) 160
BspPI GGATC 2 cut(s) 222, 617
BspQI GCTCTTC 1 cut(s) 276
BsrBI CCGCTC 1 cut(s) 719
BsrFI RCCGGY 1 cut(s) 839
BssAI RCCGGY 1 cut(s) 839
BssECI CCNNGG 1 cut(s) 235
BssMI GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
BssT1I CCWWGG 1 cut(s) 235
Bst2UI CCWGG 2 cut(s) 180, 422
Bst4CI ACNGT 2 cut(s) 272, 378
Bst6I CTCTTC 1 cut(s) 276
BstC8I GCNNGC 3 cut(s) 246, 299, 1060
BstDEI CTNAG 3 cut(s) 436, 726, 1113
BstDSI CCRYGG 1 cut(s) 235
BstEII GGTNACC 1 cut(s) 942
BstENI CCTNNNNNAGG 1 cut(s) 467
BstF5I GGATG 2 cut(s) 125, 516
BstH2I RGCGCY 1 cut(s) 298
BstHHI GCGC 1 cut(s) 297
BstKTI GATC 7 cut(s) 6, 10, 192, 217, 625, 937, 1086
BstMBI GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
BstMCI CGRYCG 2 cut(s) 10, 723
BstMWI GCNNNNNNNGC 3 cut(s) 292, 318, 824
BstNI CCWGG 2 cut(s) 180, 422
BstNSI RCATGY 1 cut(s) 665
BstPI GGTNACC 1 cut(s) 942
BstSCI CCNGG 3 cut(s) 178, 420, 488
BstSFI CTRYAG 1 cut(s) 307
BstSLI GKGCMC 1 cut(s) 783
BstV1I GCAGC 5 cut(s) 72, 556, 655, 875, 946
BstV2I GAAGAC 1 cut(s) 273
BstXI CCANNNNNNTGG 1 cut(s) 634
BstZI CGGCCG 1 cut(s) 720
Bsu15I ATCGAT 1 cut(s) 6
BsuRI GGCC 1 cut(s) 722
BsuTUI ATCGAT 1 cut(s) 6
BtgI CCRYGG 1 cut(s) 235
BtrI CACGTC 1 cut(s) 481
BtsCI GGATG 2 cut(s) 125, 516
BtsI GCAGTG 1 cut(s) 216
BtsIMutI CAGTG 2 cut(s) 216, 277
Cac8I GCNNGC 3 cut(s) 246, 299, 1060
CciI TCATGA 1 cut(s) 160
CciNI GCGGCCGC 1 cut(s) 720
CfoI GCGC 1 cut(s) 297
Cfr10I RCCGGY 1 cut(s) 839
ClaI ATCGAT 1 cut(s) 6
Csp6I GTAC 1 cut(s) 855
CviAII CATG 6 cut(s) 161, 236, 263, 536, 662, 953
CviQI GTAC 1 cut(s) 855
DdeI CTNAG 3 cut(s) 436, 726, 1113
DpnI GATC 7 cut(s) 5, 9, 191, 216, 624, 936, 1085
DpnII GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
EaeI YGGCCR 1 cut(s) 720
EagI CGGCCG 1 cut(s) 720
Eam1104I CTCTTC 1 cut(s) 276
EarI CTCTTC 1 cut(s) 276
EciI GGCGGA 1 cut(s) 460
Ecl136II GAGCTC 1 cut(s) 286
EclXI CGGCCG 1 cut(s) 720
Eco130I CCWWGG 1 cut(s) 235
Eco24I GRGCYC 1 cut(s) 288
Eco32I GATATC 2 cut(s) 514, 691
Eco52I CGGCCG 1 cut(s) 720
Eco53kI GAGCTC 1 cut(s) 286
Eco57I CTGAAG 2 cut(s) 20, 948
Eco88I CYCGRG 1 cut(s) 467
Eco91I GGTNACC 1 cut(s) 942
EcoICRI GAGCTC 1 cut(s) 286
EcoNI CCTNNNNNAGG 1 cut(s) 467
EcoO65I GGTNACC 1 cut(s) 942
EcoRI GAATTC 1 cut(s) 989
EcoRII CCWGG 2 cut(s) 178, 420
EcoRV GATATC 2 cut(s) 514, 691
EcoT14I CCWWGG 1 cut(s) 235
EcoT38I GRGCYC 1 cut(s) 288
ErhI CCWWGG 1 cut(s) 235
FaeI CATG 6 cut(s) 164, 239, 266, 539, 665, 956
FalI AAGNNNNNCTT 6 cut(s) 93, 125, 273, 305, 640, 672
FaqI GGGAC 1 cut(s) 216
FatI CATG 6 cut(s) 160, 235, 262, 535, 661, 952
FauI CCCGC 2 cut(s) 805, 1067
FbaI TGATCA 3 cut(s) 189, 934, 1083
Fnu4HI GCNGC 8 cut(s) 27, 61, 570, 669, 720, 723, 864, 960
FokI GGATG 2 cut(s) 132, 503
FriOI GRGCYC 1 cut(s) 288
Fsp4HI GCNGC 8 cut(s) 27, 61, 570, 669, 720, 723, 864, 960
FspBI CTAG 2 cut(s) 369, 1129
GlaI GCGC 1 cut(s) 296
GluI GCNGC 8 cut(s) 27, 61, 570, 669, 720, 723, 864, 960
GsaI CCCAGC 1 cut(s) 352
GsuI CTGGAG 1 cut(s) 636
HaeII RGCGCY 1 cut(s) 298
HaeIII GGCC 1 cut(s) 722
HapII CCGG 2 cut(s) 490, 840
HhaI GCGC 1 cut(s) 297
Hin1II CATG 6 cut(s) 164, 239, 266, 539, 665, 956
Hin6I GCGC 1 cut(s) 295
HinP1I GCGC 1 cut(s) 295
HincII GTYRAC 1 cut(s) 374
HindII GTYRAC 1 cut(s) 374
HindIII AAGCTT 1 cut(s) 497
HinfI GANTC 2 cut(s) 132, 506
HpaII CCGG 2 cut(s) 490, 840
HphI GGTGA 3 cut(s) 265, 854, 936
Hpy166II GTNNAC 1 cut(s) 374
Hpy188I TCNGA 5 cut(s) 511, 736, 888, 967, 1123
Hpy188III TCNNGA 2 cut(s) 38, 161
Hpy8I GTNNAC 1 cut(s) 374
HpyAV CCTTC 6 cut(s) 185, 244, 252, 642, 707, 962
HpyCH4III ACNGT 2 cut(s) 272, 378
HpyCH4IV ACGT 1 cut(s) 480
HpyCH4V TGCA 5 cut(s) 149, 301, 381, 661, 671
HpyF10VI GCNNNNNNNGC 3 cut(s) 292, 318, 824
HpyF3I CTNAG 3 cut(s) 436, 726, 1113
HpySE526I ACGT 1 cut(s) 480
Hsp92II CATG 6 cut(s) 164, 239, 266, 539, 665, 956
HspAI GCGC 1 cut(s) 295
Ksp22I TGATCA 3 cut(s) 189, 934, 1083
Kzo9I GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
LguI GCTCTTC 1 cut(s) 276
LmnI GCTCC 7 cut(s) 241, 291, 611, 617, 716, 880, 1007
Lsp1109I GCAGC 5 cut(s) 72, 556, 655, 875, 946
LweI GCATC 4 cut(s) 110, 680, 826, 827
MaeI CTAG 2 cut(s) 369, 1129
MaeII ACGT 1 cut(s) 480
MaeIII GTNAC 1 cut(s) 942
MalI GATC 7 cut(s) 5, 9, 191, 216, 624, 936, 1085
MbiI CCGCTC 1 cut(s) 719
MboI GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
MboII GAAGA 5 cut(s) 26, 278, 293, 722, 1050
MhlI GDGCHC 2 cut(s) 288, 783
MluCI AATT 7 cut(s) 77, 156, 218, 562, 928, 989, 1088
MnlI CCTC 7 cut(s) 61, 157, 316, 463, 473, 476, 864
MseI TTAA 3 cut(s) 114, 771, 807
MspA1I CMGCKG 2 cut(s) 725, 940
MspI CCGG 2 cut(s) 490, 840
MspR9I CCNGG 3 cut(s) 180, 422, 490
Mva1269I GAATGC 1 cut(s) 925
MvaI CCWGG 2 cut(s) 180, 422
MwoI GCNNNNNNNGC 3 cut(s) 292, 318, 824
NciI CCSGG 1 cut(s) 490
NcoI CCATGG 1 cut(s) 235
NdeII GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
NlaIII CATG 6 cut(s) 164, 239, 266, 539, 665, 956
NmuCI GTSAC 1 cut(s) 942
NotI GCGGCCGC 1 cut(s) 720
NspI RCATGY 1 cut(s) 665
PaeR7I CTCGAG 1 cut(s) 467
PagI TCATGA 1 cut(s) 160
PciSI GCTCTTC 1 cut(s) 276
PctI GAATGC 1 cut(s) 925
PfeI GAWTC 2 cut(s) 132, 506
PfoI TCCNGGA 2 cut(s) 178, 420
PkrI GCNGC 8 cut(s) 28, 62, 571, 670, 721, 724, 865, 961
Ple19I CGATCG 1 cut(s) 10
Psp124BI GAGCTC 1 cut(s) 288
Psp6I CCWGG 2 cut(s) 178, 420
PspEI GGTNACC 1 cut(s) 942
PspFI CCCAGC 1 cut(s) 348
PspGI CCWGG 2 cut(s) 178, 420
PspXI VCTCGAGB 1 cut(s) 467
PvuI CGATCG 1 cut(s) 10
RsaI GTAC 1 cut(s) 856
RsaNI GTAC 1 cut(s) 855
SacI GAGCTC 1 cut(s) 288
SapI GCTCTTC 1 cut(s) 276
SaqAI TTAA 3 cut(s) 114, 771, 807
SatI GCNGC 8 cut(s) 27, 61, 570, 669, 720, 723, 864, 960
Sau3AI GATC 7 cut(s) 3, 7, 189, 214, 622, 934, 1083
ScrFI CCNGG 3 cut(s) 180, 422, 490
SduI GDGCHC 2 cut(s) 288, 783
SfaNI GCATC 4 cut(s) 110, 680, 826, 827
SfcI CTRYAG 1 cut(s) 307
Sfr274I CTCGAG 1 cut(s) 467
SlaI CTCGAG 1 cut(s) 467
SmlI CTYRAG 2 cut(s) 290, 467
SmoI CTYRAG 2 cut(s) 290, 467
Sse9I AATT 7 cut(s) 77, 156, 218, 562, 928, 989, 1088
SsiI CCGC 7 cut(s) 26, 445, 719, 723, 812, 940, 1060
SspMI CTAG 2 cut(s) 369, 1129
SstI GAGCTC 1 cut(s) 288
StyD4I CCNGG 3 cut(s) 178, 420, 488
StyI CCWWGG 1 cut(s) 235
TaaI ACNGT 2 cut(s) 272, 378
TaiI ACGT 1 cut(s) 483
TaqI TCGA 3 cut(s) 6, 468, 592
TasI AATT 7 cut(s) 77, 156, 218, 562, 928, 989, 1088
TatI WGTACW 1 cut(s) 854
TauI GCSGC 3 cut(s) 29, 722, 725
TfiI GAWTC 2 cut(s) 132, 506
Tru1I TTAA 3 cut(s) 114, 771, 807
Tru9I TTAA 3 cut(s) 114, 771, 807
TscAI CASTG 2 cut(s) 216, 277
TseFI GTSAC 1 cut(s) 942
TseI GCWGC 5 cut(s) 60, 569, 668, 863, 959
Tsp45I GTSAC 1 cut(s) 942
TspDTI ATGAA 9 cut(s) 99, 124, 149, 279, 552, 569, 801, 941, 1068
TspRI CASTG 2 cut(s) 216, 277
XagI CCTNNNNNAGG 1 cut(s) 467
XapI RAATTY 3 cut(s) 156, 562, 989
XceI RCATGY 1 cut(s) 665
XhoI CTCGAG 1 cut(s) 467
XspI CTAG 2 cut(s) 369, 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.