Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001450

Physical Location & Seq

Genomic Coordinates Reverse (-)

34141973 .. 34148654

Gene Structure 6682 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1267200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGTTGTTGGGTGCCCATATTAATCAAGGGAGAACTCTTCTTTTTGTGTTTTACTTGTTCTTGCTTATAACGCGTGGATTTGAGAGCTCTGCAGAGCTTTCAGCTTCTCCAACTTGTTTCTCGCCGTCTCCTGCTATATCTTTTCACAGCGAATCCCAAAGTTCCCGGAGAAAAAAAGCGTTTCGTTTGTTGATCGATTTGGGGAAAATGTCGAGGAGAATGGTGGTGGCGGACCACCGTGAGACGGAGGATGAGTCGTCGAAAGCGGCGGCGAGGAGGAGGAAGAGTATGAGGTGGTATCGGGTATGGATGAAATTCATACTTTTATGGGCAGTGTACTCGTCCTTCTTCACACCTTTTGAGTTCGGGTTTTTCAGGGGTTTGGGGGAGAGACTCTTTATACTGGATGTAGTAGGACAGTTCTTCATCGCCTACCGAGACAGTCACACCCATCGAATGGTCTATAAGCGCAACTGGATTGCTCTACGGTACTTGAAATCGAGTTTTATCATTGACTTGCTTGGCTGTATGCCTTGGGATCACATCCACAAGGCTTGTGGAAGAAGAGAGGAAGTGAGGTATCTCCTATGGATAAGGTTATGTCGGGTGTGCAAAGTCACTAGGTTCTTTCATGACCTAGAAAAGGGTATTCGTATCAATTATCTGTTTACGAGGATTATAAAGCTTATTGTCGTTGAACTCTACTGCACGCATACAGCGGCCTGCATATTCTACTATTTGGCCACCACCCTACCTGCTTCACAAGAGGGGTACACATGGATTGGAAGTTTGAAGTTAGGTGACTACAGTTATTCAAGCTTCAGGGACATTGACCTATGGAAGCGCTACGCTTCTTTGTATTTTGCCACTGGTTATGGAGATATTCATGCAGTCAATCTGAGGGAAATGATATTCATAATGGGTTATGTATCTTTTAACATGATTCTCAGAGCGTATTTGATTGGTAACATGACGGCGTTAATTGTAAAAGGATCAAAGACAGAAAAGTTCAGGGACAAAATGATAGATCTCATCAAATATATGAACAGAAATAGACTTGGGAAGGATATCCATAATCAAATCAAGGGTCACTTGCGTTTAAACTATGAGAGTACCTGCACGGAGGCTGCTGTTCTCCAGGAAATTCCTGCTTCAATTCGCTCTAAGATTTCGCAAACTTTATATTTCCCATACATTGAAAGTGTTCCTCTGTTCAAGGGATGCTTGACAGAATTCATCAATCGGATTGTTATTAAACTGCATGAAGAATTTTTTCTCGCTGGAGAAGTGATCATGGAACCAGGAAAGTTATGTATTTCTTCTCCACAGCATCTCGCTGCATTAAAAGGACATGAAGATATTACACTTTTCCTTATTCTGGAAGGAGTAGACATCAACATCAAGGACAATTTTGGGAACACACCCTTACTTGAAGCCATCAAGAACAGGAATGATCGAGTTTCTTCTTTACTTGTCCAACAAGGGGCCTCCTTGAACATCGACAATGCTGGTAGTTTTATATGTACATCCATTGCAAGGGGGGACGCAGATCTCCTTAAAAGGTTATTGGCATATGGCATTGACCCAAATTCAAAAGATTATGATCACCGGACTCCACTTCATGTAGCTGCATCAGAAGGACTATTTATAATGGCAAAGTTGCTGTTAGAAGCTGGGGCTAGCGTTTTCTCGAAGGACAGATGGGGAAATACCCCACTAGATGAAGGTCGGATGTGTGGGAACAAGAATTTAATCAAACTGCTGGAAGAAGCAAAGGCAGCTCAGTTGACAGAATTCCCTTACTGTGCTCAAGAAATCACAGATAAAATGCCCCCAAAGAAGTGCACGGTGTACCCTTTCCACCCATGGGAAAGCAGAGAAGGAAGGAGACCTGGAATCGTGTTATGGGTGCCGAGTACCATTGGAGAGCTCATCCGAACAGCAGGAGAGCAACTGGAGTTTTCATCGAGTGGTTCCGGTATAATATTAACAGAAGATGCAGGTAAAATTCTTGACGTGGACTTGATAAATGATGGTCAGAAGCTGTATTTGGTCAGTGAGACACATTTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006950 GO:0008150 GO:0008324 GO:0009266 GO:0009409 GO:0009414 GO:0009415 GO:0009628 GO:0009719 GO:0009725 GO:0009737 GO:0009753 GO:0009987 GO:0010033 GO:0010035 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015271 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0033993 GO:0034220 GO:0042221 GO:0042391 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank_2 Ank_4 Ion_trans KHA cNMP_binding

Protein Analysis

692

Amino Acids

79.19

Weight (kDa)

9.04

Isoelectric Point (pI)

47.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	100 - 333	5.4e-15	Ion transport protein
Ank_2	PF12796	444 - 533	2e-11	Ankyrin repeats (3 copies)
Ank_2	PF12796	512 - 589	9.3e-10	Ankyrin repeats (3 copies)
Ank_4	PF13637	513 - 556	4.6e-07	Ankyrin repeats (many copies)
Ank_5	PF13857	522 - 574	9.9e-10	Ankyrin repeats (many copies)
Ank	PF00023	535 - 566	7.6e-06	Ankyrin repeat
KHA	PF11834	613 - 684	1.6e-20	KHA, dimerisation domain of potassium ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001450)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G02850 AT3G02850 AT3G02850 AT5G37500 AT5G37500 AT5G37500 AT5G37500
fragaria_vesca	FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_1g30020 FvH4_5g17700 FvH4_5g17700 FvH4_5g17700 FvH4_5g17700
malus_domestica	MD09G1267200.v1.1 MD09G1267300.v1.1 MD14G1239500.v1.1 MD17G1255200.v1.1
prunus_persica	Prupe.3G164900_v2.0.a1 Prupe.3G164900_v2.0.a1 Prupe.5G237000_v2.0.a1 Prupe.5G237000_v2.0.a1
pyrus_communis	pycom09g18000 pycom14g20040 pycom14g20050 pycom17g26330
rosa_chinensis	RchiOBHm_Chr3g0492241 RchiOBHm_Chr7g0177951
rosa_laevigata	RLG00000005488 RLG00000022790
rosa_multiflora	Rmu_co8354969.1_g000001 Rmu_sc0003579.1_g000005 Rmu_sc0017005.1_g000005
rosa_roxburghii	Rroxscaffold_3G00275370 Rroxscaffold_6G00392480
rosa_rugosa	Rorug03G0252500 Rorug03G0252600 Rorug06G0411600.1 Rorug06G0411700.1
rosa_samantha	Rh3AG302600 Rh3BG338200 Rh3CG335700 Rh3DG337800 Rh7AG010400 Rh7BG010600 Rh7CG011000 Rh7DG010700
rosa_wichuraiana	Rw3G026690 Rw7G000890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	68, 680, 1649
Acc36I	ACCTGC	3 cut(s)	763, 1124, 1991
AccB1I	GGYRCC	2 cut(s)	11, 1909
AccB7I	CCANNNNNTGG	1 cut(s)	457
AccI	GTMKAC	1 cut(s)	1389
AccII	CGCG	1 cut(s)	73
AciI	CCGC	4 cut(s)	230, 266, 269, 719
AclWI	GGATC	2 cut(s)	546, 1000
AcoI	YGGCCR	1 cut(s)	741
AcsI	RAATTY	8 cut(s)	314, 1143, 1232, 1268, 1588, 1747, 1793, 2007
AcuI	CTGAAG	1 cut(s)	805
AfaI	GTAC	7 cut(s)	338, 491, 773, 1114, 1525, 1853, 1918
AfeI	AGCGCT	1 cut(s)	845
AfiI	CCNNNNNNNGG	7 cut(s)	244, 457, 643, 1378, 1483, 1536, 1867
AflIII	ACRYGT	1 cut(s)	71
AjiI	CACGTC	1 cut(s)	2017
AjnI	CCWGG	3 cut(s)	1137, 1300, 1891
AjuI	GAANNNNNNNTTGG	2 cut(s)	2033, 2065
Alw21I	GWGCWC	4 cut(s)	89, 1810, 1847, 1932
Alw26I	GTCTC	6 cut(s)	132, 236, 385, 432, 1882, 2054
Alw44I	GTGCAC	1 cut(s)	1843
AlwI	GGATC	2 cut(s)	546, 1000
AlwNI	CAGNNNCTG	1 cut(s)	2044
Aor51HI	AGCGCT	1 cut(s)	845
AoxI	GGCC	3 cut(s)	720, 741, 1485
ApaLI	GTGCAC	1 cut(s)	1843
ApeKI	GCWGC	4 cut(s)	1127, 1337, 1628, 1778
ApoI	RAATTY	8 cut(s)	314, 1143, 1232, 1268, 1588, 1747, 1793, 2007
ArsI	GACNNNNNNTTYG	2 cut(s)	1072, 1104
AseI	ATTAAT	1 cut(s)	21
Asp700I	GAANNNNTTC	2 cut(s)	1203, 1272
AspLEI	GCGC	2 cut(s)	471, 846
AspS9I	GGNCC	2 cut(s)	232, 1485
AsuC2I	CCSGG	1 cut(s)	166
AsuHPI	GGTGA	2 cut(s)	812, 1598
AsuNHI	GCTAGC	1 cut(s)	1679
AvaII	GGWCC	1 cut(s)	232
BaeGI	GKGCMC	2 cut(s)	16, 1847
BalI	TGGCCA	1 cut(s)	743
BanI	GGYRCC	2 cut(s)	11, 1909
BanII	GRGCYC	2 cut(s)	89, 1932
BarI	GAAGNNNNNNTAC	2 cut(s)	329, 361
Bbv12I	GWGCWC	4 cut(s)	89, 1810, 1847, 1932
BbvI	GCAGC	4 cut(s)	1114, 1324, 1615, 1790
BccI	CCATC	4 cut(s)	459, 1445, 1695, 2027
BceAI	ACGGC	2 cut(s)	109, 990
BcgI	CGANNNNNNTGC	2 cut(s)	321, 355
BciT130I	CCWGG	3 cut(s)	1139, 1302, 1893
BclI	TGATCA	2 cut(s)	1290, 1603
BcnI	CCSGG	1 cut(s)	166
BcoDI	GTCTC	6 cut(s)	132, 236, 385, 432, 1882, 2054
BfaI	CTAG	4 cut(s)	621, 638, 1680, 1718
BfmI	CTRYAG	2 cut(s)	90, 805
BfoI	RGCGCY	1 cut(s)	847
BfuAI	ACCTGC	3 cut(s)	763, 1124, 1991
BglII	AGATCT	2 cut(s)	1027, 1549
BisI	GCNGC	7 cut(s)	267, 270, 720, 1128, 1338, 1629, 1779
BlsI	GCNGC	7 cut(s)	268, 271, 721, 1129, 1339, 1630, 1780
Bme1390I	CCNGG	4 cut(s)	166, 1139, 1302, 1893
Bme18I	GGWCC	1 cut(s)	232
BmgBI	CACGTC	1 cut(s)	2017
BmgT120I	GGNCC	2 cut(s)	232, 1485
BmiI	GGNNCC	5 cut(s)	13, 1299, 1486, 1911, 1975
BmrFI	CCNGG	4 cut(s)	166, 1139, 1302, 1893
BmsI	GCATC	4 cut(s)	1211, 1339, 1640, 1987
BmtI	GCTAGC	1 cut(s)	1683
BpmI	CTGGAG	3 cut(s)	1121, 1302, 1976
BpuEI	CTTGAG	1 cut(s)	1794
BpuMI	CCSGG	1 cut(s)	166
Bsa29I	ATCGAT	1 cut(s)	195
BsaBI	GATNNNNATC	1 cut(s)	1602
BsaI	GGTCTC	1 cut(s)	1882
BsaJI	CCNNGG	2 cut(s)	533, 1865
BsaWI	WCCGGW	2 cut(s)	1608, 1976
BsaXI	ACNNNNNCTCC	4 cut(s)	239, 269, 271, 301
Bsc4I	CCNNNNNNNGG	7 cut(s)	244, 457, 643, 1378, 1483, 1536, 1867
Bse1I	ACTGG	4 cut(s)	408, 479, 874, 1959
Bse3DI	GCAATG	1 cut(s)	1530
Bse8I	GATNNNNATC	1 cut(s)	1602
BseBI	CCWGG	3 cut(s)	1139, 1302, 1893
BseCI	ATCGAT	1 cut(s)	195
BseDI	CCNNGG	2 cut(s)	533, 1865
BseGI	GGATG	8 cut(s)	256, 315, 412, 543, 1226, 1526, 1737, 1932
BseJI	GATNNNNATC	1 cut(s)	1602
BseLI	CCNNNNNNNGG	7 cut(s)	244, 457, 643, 1378, 1483, 1536, 1867
BseMI	GCAATG	1 cut(s)	1530
BseMII	CTCAG	3 cut(s)	890, 961, 1796
BseNI	ACTGG	4 cut(s)	408, 479, 874, 1959
BseRI	GAGGAG	3 cut(s)	229, 289, 292
BseSI	GKGCMC	2 cut(s)	16, 1847
BseXI	GCAGC	4 cut(s)	1114, 1324, 1615, 1790
BseYI	CCCAGC	1 cut(s)	1673
BsgI	GTGCAG	2 cut(s)	691, 1102
Bsh1236I	CGCG	1 cut(s)	73
BshFI	GGCC	3 cut(s)	722, 743, 1487
BshNI	GGYRCC	2 cut(s)	11, 1909
BshVI	ATCGAT	1 cut(s)	195
BsiHKAI	GWGCWC	4 cut(s)	89, 1810, 1847, 1932
BsiSI	CCGG	3 cut(s)	166, 1609, 1977
BslFI	GGGAC	3 cut(s)	839, 1028, 1556
BslI	CCNNNNNNNGG	7 cut(s)	244, 457, 643, 1378, 1483, 1536, 1867
BsmAI	GTCTC	6 cut(s)	132, 236, 385, 432, 1882, 2054
BsmBI	CGTCTC	2 cut(s)	132, 236
BsmFI	GGGAC	3 cut(s)	839, 1028, 1556
BsnI	GGCC	3 cut(s)	722, 743, 1487
Bso31I	GGTCTC	1 cut(s)	1882
Bsp1286I	GDGCHC	5 cut(s)	16, 89, 1810, 1847, 1932
Bsp1407I	TGTACA	1 cut(s)	1523
Bsp143I	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
Bsp19I	CCATGG	1 cut(s)	1865
BspACI	CCGC	4 cut(s)	230, 266, 269, 719
BspANI	GGCC	3 cut(s)	722, 743, 1487
BspCNI	CTCAG	3 cut(s)	891, 960, 1795
BspDI	ATCGAT	1 cut(s)	195
BspFNI	CGCG	1 cut(s)	73
BspHI	TCATGA	1 cut(s)	631
BspLI	GGNNCC	5 cut(s)	13, 1299, 1486, 1911, 1975
BspMAI	CTGCAG	1 cut(s)	94
BspMI	ACCTGC	3 cut(s)	763, 1124, 1991
BspOI	GCTAGC	1 cut(s)	1683
BspPI	GGATC	2 cut(s)	546, 1000
BspT107I	GGYRCC	2 cut(s)	11, 1909
BspTNI	GGTCTC	1 cut(s)	1882
BsrDI	GCAATG	1 cut(s)	1530
BsrGI	TGTACA	1 cut(s)	1523
BsrI	ACTGG	4 cut(s)	408, 479, 874, 1959
BssECI	CCNNGG	2 cut(s)	533, 1865
BssMI	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
BssT1I	CCWWGG	2 cut(s)	533, 1865
Bst2UI	CCWGG	3 cut(s)	1139, 1302, 1893
Bst4CI	ACNGT	7 cut(s)	239, 420, 443, 489, 809, 1805, 1849
Bst6I	CTCTTC	3 cut(s)	42, 278, 559
BstAUI	TGTACA	1 cut(s)	1523
BstC8I	GCNNGC	3 cut(s)	710, 724, 1681
BstDEI	CTNAG	4 cut(s)	899, 947, 1164, 1782
BstDSI	CCRYGG	1 cut(s)	1865
BstENI	CCTNNNNNAGG	1 cut(s)	641
BstF5I	GGATG	8 cut(s)	256, 315, 412, 543, 1226, 1526, 1737, 1932
BstFNI	CGCG	1 cut(s)	73
BstH2I	RGCGCY	1 cut(s)	847
BstHHI	GCGC	2 cut(s)	471, 846
BstKTI	GATC	8 cut(s)	195, 541, 995, 1030, 1293, 1456, 1552, 1606
BstMAI	GTCTC	6 cut(s)	132, 236, 385, 432, 1882, 2054
BstMBI	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
BstMWI	GCNNNNNNNGC	2 cut(s)	70, 1778
BstNI	CCWGG	3 cut(s)	1139, 1302, 1893
BstSCI	CCNGG	4 cut(s)	164, 1137, 1300, 1891
BstSFI	CTRYAG	2 cut(s)	90, 805
BstSLI	GKGCMC	2 cut(s)	16, 1847
BstUI	CGCG	1 cut(s)	73
BstV1I	GCAGC	4 cut(s)	1114, 1324, 1615, 1790
BstX2I	RGATCY	2 cut(s)	1027, 1549
BstYI	RGATCY	2 cut(s)	1027, 1549
Bsu15I	ATCGAT	1 cut(s)	195
BsuRI	GGCC	3 cut(s)	722, 743, 1487
BsuTUI	ATCGAT	1 cut(s)	195
BtgI	CCRYGG	1 cut(s)	1865
BtgZI	GCGATG	1 cut(s)	412
BtrI	CACGTC	1 cut(s)	2017
BtsCI	GGATG	8 cut(s)	256, 315, 412, 543, 1226, 1526, 1737, 1932
BtsI	GCAGTG	1 cut(s)	339
BtsIMutI	CAGTG	3 cut(s)	339, 867, 2062
BveI	ACCTGC	3 cut(s)	763, 1124, 1991
Cac8I	GCNNGC	3 cut(s)	710, 724, 1681
CaiI	CAGNNNCTG	1 cut(s)	2044
CciI	TCATGA	1 cut(s)	631
CfoI	GCGC	2 cut(s)	471, 846
Cfr13I	GGNCC	2 cut(s)	232, 1485
ClaI	ATCGAT	1 cut(s)	195
CseI	GACGC	1 cut(s)	1553
Csp6I	GTAC	7 cut(s)	337, 490, 772, 1113, 1524, 1852, 1917
CspCI	CAANNNNNGTGG	4 cut(s)	536, 538, 571, 573
CviQI	GTAC	7 cut(s)	337, 490, 772, 1113, 1524, 1852, 1917
DdeI	CTNAG	4 cut(s)	899, 947, 1164, 1782
DpnI	GATC	8 cut(s)	194, 540, 994, 1029, 1292, 1455, 1551, 1605
DpnII	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
DraI	TTTAAA	1 cut(s)	1101
EaeI	YGGCCR	1 cut(s)	741
Eam1104I	CTCTTC	3 cut(s)	42, 278, 559
EarI	CTCTTC	3 cut(s)	42, 278, 559
EciI	GGCGGA	1 cut(s)	245
Ecl136II	GAGCTC	2 cut(s)	87, 1930
Eco130I	CCWWGG	2 cut(s)	533, 1865
Eco24I	GRGCYC	2 cut(s)	89, 1932
Eco31I	GGTCTC	1 cut(s)	1882
Eco32I	GATATC	1 cut(s)	1069
Eco47I	GGWCC	1 cut(s)	232
Eco47III	AGCGCT	1 cut(s)	845
Eco53kI	GAGCTC	2 cut(s)	87, 1930
Eco57I	CTGAAG	1 cut(s)	805
EcoICRI	GAGCTC	2 cut(s)	87, 1930
EcoNI	CCTNNNNNAGG	1 cut(s)	641
EcoO109I	RGGNCCY	1 cut(s)	1485
EcoRI	GAATTC	2 cut(s)	1232, 1793
EcoRII	CCWGG	3 cut(s)	1137, 1300, 1891
EcoRV	GATATC	1 cut(s)	1069
EcoT14I	CCWWGG	2 cut(s)	533, 1865
EcoT38I	GRGCYC	2 cut(s)	89, 1932
ErhI	CCWWGG	2 cut(s)	533, 1865
Esp3I	CGTCTC	2 cut(s)	132, 236
FalI	AAGNNNNNCTT	4 cut(s)	1076, 1108, 1208, 1240
FaqI	GGGAC	3 cut(s)	839, 1028, 1556
FauNDI	CATATG	1 cut(s)	1573
FbaI	TGATCA	2 cut(s)	1290, 1603
FblI	GTMKAC	1 cut(s)	1389
Fnu4HI	GCNGC	7 cut(s)	267, 270, 720, 1128, 1338, 1629, 1779
FokI	GGATG	8 cut(s)	263, 322, 419, 530, 1233, 1513, 1744, 1919
FriOI	GRGCYC	2 cut(s)	89, 1932
Fsp4HI	GCNGC	7 cut(s)	267, 270, 720, 1128, 1338, 1629, 1779
FspBI	CTAG	4 cut(s)	621, 638, 1680, 1718
GlaI	GCGC	2 cut(s)	470, 845
GluI	GCNGC	7 cut(s)	267, 270, 720, 1128, 1338, 1629, 1779
GsaI	CCCAGC	1 cut(s)	1677
GsuI	CTGGAG	3 cut(s)	1121, 1302, 1976
HaeII	RGCGCY	1 cut(s)	847
HaeIII	GGCC	3 cut(s)	722, 743, 1487
HapII	CCGG	3 cut(s)	166, 1609, 1977
HgaI	GACGC	1 cut(s)	1553
HhaI	GCGC	2 cut(s)	471, 846
Hin6I	GCGC	2 cut(s)	469, 844
HinP1I	GCGC	2 cut(s)	469, 844
HincII	GTYRAC	1 cut(s)	1788
HindII	GTYRAC	1 cut(s)	1788
HindIII	AAGCTT	2 cut(s)	683, 817
HinfI	GANTC	6 cut(s)	152, 254, 393, 943, 1612, 1896
HpaII	CCGG	3 cut(s)	166, 1609, 1977
HphI	GGTGA	2 cut(s)	812, 1598
Hpy166II	GTNNAC	8 cut(s)	337, 669, 774, 1390, 1788, 1845, 1852, 2020
Hpy188I	TCNGA	7 cut(s)	900, 950, 1245, 1636, 1731, 1937, 2040
Hpy188III	TCNNGA	6 cut(s)	632, 1379, 1441, 1690, 1811, 2012
Hpy8I	GTNNAC	8 cut(s)	337, 669, 774, 1390, 1788, 1845, 1852, 2020
Hpy99I	CGWCG	1 cut(s)	262
HpyAV	CCTTC	8 cut(s)	355, 1057, 1376, 1631, 1687, 1718, 1874, 1878
HpyCH4III	ACNGT	7 cut(s)	239, 420, 443, 489, 809, 1805, 1849
HpyCH4IV	ACGT	1 cut(s)	2016
HpyF10VI	GCNNNNNNNGC	2 cut(s)	70, 1778
HpyF3I	CTNAG	4 cut(s)	899, 947, 1164, 1782
HpySE526I	ACGT	1 cut(s)	2016
HspAI	GCGC	2 cut(s)	469, 844
Ksp22I	TGATCA	2 cut(s)	1290, 1603
Kzo9I	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
Lsp1109I	GCAGC	4 cut(s)	1114, 1324, 1615, 1790
LweI	GCATC	4 cut(s)	1211, 1339, 1640, 1987
MaeI	CTAG	4 cut(s)	621, 638, 1680, 1718
MaeII	ACGT	1 cut(s)	2016
MaeIII	GTNAC	5 cut(s)	443, 616, 800, 965, 1088
MalI	GATC	8 cut(s)	194, 540, 994, 1029, 1292, 1455, 1551, 1605
MboI	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
MflI	RGATCY	2 cut(s)	1027, 1549
MhlI	GDGCHC	5 cut(s)	16, 89, 1810, 1847, 1932
MlsI	TGGCCA	1 cut(s)	743
MluI	ACGCGT	1 cut(s)	71
MluNI	TGGCCA	1 cut(s)	743
MlyI	GAGTC	3 cut(s)	263, 387, 1606
MmeI	TCCRAC	3 cut(s)	134, 1501, 1709
Mox20I	TGGCCA	1 cut(s)	743
MroXI	GAANNNNTTC	2 cut(s)	1203, 1272
MscI	TGGCCA	1 cut(s)	743
MseI	TTAA	9 cut(s)	21, 936, 980, 1100, 1254, 1343, 1557, 1751, 1988
Msp20I	TGGCCA	1 cut(s)	743
MspA1I	CMGCKG	1 cut(s)	719
MspI	CCGG	3 cut(s)	166, 1609, 1977
MspR9I	CCNGG	4 cut(s)	166, 1139, 1302, 1893
MssI	GTTTAAAC	1 cut(s)	1101
MvaI	CCWGG	3 cut(s)	1139, 1302, 1893
MvnI	CGCG	1 cut(s)	73
MwoI	GCNNNNNNNGC	2 cut(s)	70, 1778
NciI	CCSGG	1 cut(s)	166
NcoI	CCATGG	1 cut(s)	1865
NdeI	CATATG	1 cut(s)	1573
NdeII	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
NheI	GCTAGC	1 cut(s)	1679
NlaIV	GGNNCC	5 cut(s)	13, 1299, 1486, 1911, 1975
NmeAIII	GCCGAG	1 cut(s)	1938
NmuCI	GTSAC	4 cut(s)	443, 616, 800, 1088
PagI	TCATGA	1 cut(s)	631
PdmI	GAANNNNTTC	2 cut(s)	1203, 1272
PfeI	GAWTC	3 cut(s)	152, 943, 1896
PflMI	CCANNNNNTGG	1 cut(s)	457
PfoI	TCCNGGA	2 cut(s)	164, 1137
PkrI	GCNGC	7 cut(s)	268, 271, 721, 1129, 1339, 1630, 1780
PleI	GAGTC	3 cut(s)	262, 387, 1606
PmeI	GTTTAAAC	1 cut(s)	1101
PpsI	GAGTC	3 cut(s)	262, 387, 1606
PshBI	ATTAAT	1 cut(s)	21
PsiI	TTATAA	3 cut(s)	68, 680, 1649
Psp124BI	GAGCTC	2 cut(s)	89, 1932
Psp6I	CCWGG	3 cut(s)	1137, 1300, 1891
PspFI	CCCAGC	1 cut(s)	1673
PspGI	CCWGG	3 cut(s)	1137, 1300, 1891
PspN4I	GGNNCC	5 cut(s)	13, 1299, 1486, 1911, 1975
PspPI	GGNCC	2 cut(s)	232, 1485
PstI	CTGCAG	1 cut(s)	94
PstNI	CAGNNNCTG	1 cut(s)	2044
PsuI	RGATCY	2 cut(s)	1027, 1549
RsaI	GTAC	7 cut(s)	338, 491, 773, 1114, 1525, 1853, 1918
RsaNI	GTAC	7 cut(s)	337, 490, 772, 1113, 1524, 1852, 1917
SacI	GAGCTC	2 cut(s)	89, 1932
SaqAI	TTAA	9 cut(s)	21, 936, 980, 1100, 1254, 1343, 1557, 1751, 1988
SatI	GCNGC	7 cut(s)	267, 270, 720, 1128, 1338, 1629, 1779
Sau3AI	GATC	8 cut(s)	192, 538, 992, 1027, 1290, 1453, 1549, 1603
Sau96I	GGNCC	2 cut(s)	232, 1485
SchI	GAGTC	3 cut(s)	263, 387, 1606
ScrFI	CCNGG	4 cut(s)	166, 1139, 1302, 1893
SduI	GDGCHC	5 cut(s)	16, 89, 1810, 1847, 1932
SfaNI	GCATC	4 cut(s)	1211, 1339, 1640, 1987
SfcI	CTRYAG	2 cut(s)	90, 805
SinI	GGWCC	1 cut(s)	232
SmlI	CTYRAG	1 cut(s)	1809
SmoI	CTYRAG	1 cut(s)	1809
SsiI	CCGC	4 cut(s)	230, 266, 269, 719
SspI	AATATT	1 cut(s)	1986
SspMI	CTAG	4 cut(s)	621, 638, 1680, 1718
SstI	GAGCTC	2 cut(s)	89, 1932
StyD4I	CCNGG	4 cut(s)	164, 1137, 1300, 1891
StyI	CCWWGG	2 cut(s)	533, 1865
TaaI	ACNGT	7 cut(s)	239, 420, 443, 489, 809, 1805, 1849
TaiI	ACGT	1 cut(s)	2019
TaqI	TCGA	9 cut(s)	195, 212, 260, 454, 500, 1456, 1500, 1691, 1967
TatI	WGTACW	2 cut(s)	336, 1523
TauI	GCSGC	3 cut(s)	269, 272, 722
TfiI	GAWTC	3 cut(s)	152, 943, 1896
Tru1I	TTAA	9 cut(s)	21, 936, 980, 1100, 1254, 1343, 1557, 1751, 1988
Tru9I	TTAA	9 cut(s)	21, 936, 980, 1100, 1254, 1343, 1557, 1751, 1988
TscAI	CASTG	3 cut(s)	339, 874, 2062
TseFI	GTSAC	4 cut(s)	443, 616, 800, 1088
TseI	GCWGC	4 cut(s)	1127, 1337, 1628, 1778
Tsp45I	GTSAC	4 cut(s)	443, 616, 800, 1088
TspGWI	ACGGA	2 cut(s)	260, 1136
TspRI	CASTG	3 cut(s)	339, 874, 2062
Van91I	CCANNNNNTGG	1 cut(s)	457
VneI	GTGCAC	1 cut(s)	1843
VpaK11BI	GGWCC	1 cut(s)	232
VspI	ATTAAT	1 cut(s)	21
XagI	CCTNNNNNAGG	1 cut(s)	641
XapI	RAATTY	8 cut(s)	314, 1143, 1232, 1268, 1588, 1747, 1793, 2007
XcmI	CCANNNNNNNNNTGG	1 cut(s)	554
XmiI	GTMKAC	1 cut(s)	1389
XmnI	GAANNNNTTC	2 cut(s)	1203, 1272
XspI	CTAG	4 cut(s)	621, 638, 1680, 1718

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.