pycom09g18000

Potassium channel

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
18593987 .. 18597780
3794 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g18000.5

Sequence Viewer

Length: 1554 bp
ATGATTCTTGGAGCGTATTTGATTGGTAACATGACAGAGTTAATTGTGAAAGGATCGAACACAGAAAAGTTCAGGGACAAAATGACAGATCTCGTCAAATATATGAACAGAAATAGACTTGGGAAGGATATCCGTAATCAAATCAAAGGTCACTTGCGTTTACAATATGAGAGTACGGAGGCTGCTGTTCTCCAGGAAATTCCTGCTTCAATTCGCTCTAAGATTTTGCAAACTTTATATTTCCGATACATTGAAAGTGTTCCTCTCTTCAAGGGATGCTCGACAGAATTCATCAATCAGATCGTTATTAAACTGCATGAAGAATTTTTTCTCCCTGGAGAAGTGATCATGGAACCAGGAAACGTCGTGGATCAACTTTATTTCGTCTGTCATCGTGTGTTGGAGGAGGTGGGCATAGGGGAAGATGGAACAGAAGAAACTCTTGAGCTTTTGGAACCTAACAGCTCATTTGGAGAAATCTCCATTCTTTGCAAAATTCCTCAACTTTATACAGTTAGGGTGTGTGAATTATGTAGACTTCTGCGAATTGATAAACAATCTTTTACAAGCATCCTTGGCATATACTTCTATGATGGGCGGAAAATCTTGAACAACCTTTTAGAGGGTAAAGCACCTCGCATGAAACAACTAGAGTCAAACATTACATTTCATATCGGAAAGCAAGAAGCTGAGTTTGCTTTGAAGTTCAGTAGCGCGGCTTACCACGGAGATCGATTTCAGCTAAAAGGTTTGATCCGACCTGGAACTGATCCCAACAAGACAGATTATGATGGAAGGTCACCCTTGCATCTCGCTGCATTAAAAGGACATGAAGATATTACACTTTTCCTTATTCGGGAAGGAGTAGACATCAACATCAAGGACAATTTTGGGAACACACCCTTACTTGAAGCCATCAAGAACGGGAATGATCGAGTTTCTTCTTTACTTATCCAACAAGGGGCTTCCTTGAACATCGACAATGCTGGTTGTTTTATATGTACATCCATTGCAAGGGGGGACGCAGATCTCCTTAAAAGGTTATTGGCAAATGGCATTGACCCAAATTCAAAAGATTATGATCACCGGACTCCACTTCATGTAGCTGCATCAGAAGGACTATATATAATGGCAAAGTTGCTGTTAGAAGCTGGGGCTAGCGTTTTCTCGAAGGACAGATGGGGAAATACCCCACTAGGTGAAGGTCGGATGTGTGGGAACAAGAATTTAATCAAACTGCTGGAAGAAGCGAAGGCAGCTCAGTTGACAGAATTCCCTTACTGTGCTCAAGCAATCACAGATAAAATGCACCCAAAGAAGTGCACGGTGTACTCTTTCCACCCATGGGAAAGCAGAGAAGGAAGGAGACCTGGAATCGTGTTATGGGTCCCGAGTACCATTGGAGAGCTCATCCGAACAGCAGGAAAGCAATTGGAGTTTTCATCGAGTGGTTCCGATATAATATTAACAGAAGATGCAGGTAAAATTCTTGATGTGAACTTGTTAAATGATGGTCAGAGGCTGTATTTGGTCAGTGAGACACATTTTACATAA

Protein Analysis

518

Amino Acids

58.04

Weight (kDa)

6.23

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1469
AccI GTMKAC 2 cut(s) 535, 867
AccII CGCG 1 cut(s) 716
AciI CCGC 2 cut(s) 598, 716
AclWI GGATC 4 cut(s) 61, 378, 748, 764
AcsI RAATTY 8 cut(s) 198, 287, 323, 495, 1066, 1225, 1271, 1485
AdeI CACNNNGTG 1 cut(s) 1199
AfaI GTAC 4 cut(s) 175, 1003, 1331, 1396
AfiI CCNNNNNNNGG 5 cut(s) 622, 856, 961, 1014, 1345
AgsI TTSAA 8 cut(s) 210, 254, 271, 610, 703, 911, 973, 1071
AjnI CCWGG 5 cut(s) 192, 334, 355, 760, 1369
AluBI AGCT 8 cut(s) 448, 465, 689, 742, 1106, 1151, 1259, 1408
AluI AGCT 8 cut(s) 448, 465, 689, 742, 1106, 1151, 1259, 1408
Alw21I GWGCWC 3 cut(s) 1288, 1325, 1410
Alw26I GTCTC 2 cut(s) 1360, 1532
Alw44I GTGCAC 1 cut(s) 1321
AlwI GGATC 4 cut(s) 61, 378, 748, 764
AlwNI CAGNNNCTG 1 cut(s) 1522
Ama87I CYCGRG 1 cut(s) 1390
ApaLI GTGCAC 1 cut(s) 1321
ApeKI GCWGC 4 cut(s) 182, 815, 1106, 1256
ApoI RAATTY 8 cut(s) 198, 287, 323, 495, 1066, 1225, 1271, 1485
ArsI GACNNNNNNTTYG 2 cut(s) 133, 165
Asp700I GAANNNNTTC 2 cut(s) 258, 327
AspLEI GCGC 1 cut(s) 716
AspS9I GGNCC 1 cut(s) 1387
AsuHPI GGTGA 3 cut(s) 792, 1076, 1211
AsuNHI GCTAGC 1 cut(s) 1157
AvaI CYCGRG 1 cut(s) 1390
AvaII GGWCC 1 cut(s) 1387
BaeGI GKGCMC 1 cut(s) 1325
BanII GRGCYC 1 cut(s) 1410
Bbv12I GWGCWC 3 cut(s) 1288, 1325, 1410
BbvI GCAGC 4 cut(s) 169, 802, 1093, 1268
BccI CCATC 6 cut(s) 419, 587, 785, 923, 1173, 1505
BciT130I CCWGG 5 cut(s) 194, 336, 357, 762, 1371
BclI TGATCA 2 cut(s) 345, 1081
BcoDI GTCTC 2 cut(s) 1360, 1532
BfaI CTAG 3 cut(s) 650, 1158, 1196
BfuAI ACCTGC 1 cut(s) 1469
BglII AGATCT 2 cut(s) 88, 1027
BisI GCNGC 5 cut(s) 183, 717, 816, 1107, 1257
BlsI GCNGC 5 cut(s) 184, 718, 817, 1108, 1258
Bme1390I CCNGG 5 cut(s) 194, 336, 357, 762, 1371
Bme18I GGWCC 1 cut(s) 1387
BmeT110I CYCGRG 1 cut(s) 1390
BmgT120I GGNCC 1 cut(s) 1387
BmiI GGNNCC 5 cut(s) 354, 456, 1388, 1389, 1453
BmrFI CCNGG 5 cut(s) 194, 336, 357, 762, 1371
BmsI GCATC 5 cut(s) 266, 579, 817, 1118, 1465
BmtI GCTAGC 1 cut(s) 1161
BpmI CTGGAG 2 cut(s) 176, 357
BpuEI CTTGAG 2 cut(s) 464, 1272
Bsa29I ATCGAT 1 cut(s) 733
BsaBI GATNNNNATC 1 cut(s) 1080
BsaI GGTCTC 1 cut(s) 1360
BsaJI CCNNGG 4 cut(s) 334, 574, 724, 1343
BsaWI WCCGGW 1 cut(s) 1086
Bsc4I CCNNNNNNNGG 5 cut(s) 622, 856, 961, 1014, 1345
Bse3DI GCAATG 1 cut(s) 1008
Bse8I GATNNNNATC 1 cut(s) 1080
BseBI CCWGG 5 cut(s) 194, 336, 357, 762, 1371
BseCI ATCGAT 1 cut(s) 733
BseDI CCNNGG 4 cut(s) 334, 574, 724, 1343
BseGI GGATG 5 cut(s) 281, 570, 1004, 1215, 1410
BseJI GATNNNNATC 1 cut(s) 1080
BseLI CCNNNNNNNGG 5 cut(s) 622, 856, 961, 1014, 1345
BseMI GCAATG 1 cut(s) 1008
BseMII CTCAG 2 cut(s) 681, 1274
BseRI GAGGAG 1 cut(s) 419
BseSI GKGCMC 1 cut(s) 1325
BseXI GCAGC 4 cut(s) 169, 802, 1093, 1268
BseYI CCCAGC 1 cut(s) 1151
Bsh1236I CGCG 1 cut(s) 716
BshVI ATCGAT 1 cut(s) 733
BsiHKAI GWGCWC 3 cut(s) 1288, 1325, 1410
BsiHKCI CYCGRG 1 cut(s) 1390
BsiSI CCGG 1 cut(s) 1087
BslFI GGGAC 3 cut(s) 89, 1034, 1373
BslI CCNNNNNNNGG 5 cut(s) 622, 856, 961, 1014, 1345
BsmAI GTCTC 2 cut(s) 1360, 1532
BsmFI GGGAC 3 cut(s) 89, 1034, 1373
Bso31I GGTCTC 1 cut(s) 1360
BsoBI CYCGRG 1 cut(s) 1390
Bsp1286I GDGCHC 3 cut(s) 1288, 1325, 1410
Bsp1407I TGTACA 1 cut(s) 1001
Bsp19I CCATGG 1 cut(s) 1343
BspACI CCGC 2 cut(s) 598, 716
BspCNI CTCAG 2 cut(s) 682, 1273
BspDI ATCGAT 1 cut(s) 733
BspFNI CGCG 1 cut(s) 716
BspLI GGNNCC 5 cut(s) 354, 456, 1388, 1389, 1453
BspMI ACCTGC 1 cut(s) 1469
BspOI GCTAGC 1 cut(s) 1161
BspPI GGATC 4 cut(s) 61, 378, 748, 764
BspTNI GGTCTC 1 cut(s) 1360
BsrDI GCAATG 1 cut(s) 1008
BsrGI TGTACA 1 cut(s) 1001
BssECI CCNNGG 4 cut(s) 334, 574, 724, 1343
BssT1I CCWWGG 2 cut(s) 574, 1343
Bst2UI CCWGG 5 cut(s) 194, 336, 357, 762, 1371
Bst4CI ACNGT 3 cut(s) 514, 1283, 1327
Bst6I CTCTTC 1 cut(s) 272
BstAUI TGTACA 1 cut(s) 1001
BstC8I GCNNGC 1 cut(s) 1159
BstDEI CTNAG 3 cut(s) 219, 690, 1260
BstDSI CCRYGG 2 cut(s) 724, 1343
BstEII GGTNACC 1 cut(s) 798
BstENI CCTNNNNNAGG 1 cut(s) 620
BstF5I GGATG 5 cut(s) 281, 570, 1004, 1215, 1410
BstFNI CGCG 1 cut(s) 716
BstHHI GCGC 1 cut(s) 716
BstMAI GTCTC 2 cut(s) 1360, 1532
BstMWI GCNNNNNNNGC 3 cut(s) 576, 695, 1256
BstNI CCWGG 5 cut(s) 194, 336, 357, 762, 1371
BstPI GGTNACC 1 cut(s) 798
BstSCI CCNGG 5 cut(s) 192, 334, 355, 760, 1369
BstSLI GKGCMC 1 cut(s) 1325
BstUI CGCG 1 cut(s) 716
BstV1I GCAGC 4 cut(s) 169, 802, 1093, 1268
BstX2I RGATCY 2 cut(s) 88, 1027
BstYI RGATCY 2 cut(s) 88, 1027
Bsu15I ATCGAT 1 cut(s) 733
BsuTUI ATCGAT 1 cut(s) 733
BtgI CCRYGG 2 cut(s) 724, 1343
BtsCI GGATG 5 cut(s) 281, 570, 1004, 1215, 1410
BtsIMutI CAGTG 1 cut(s) 1540
BveI ACCTGC 1 cut(s) 1469
Cac8I GCNNGC 1 cut(s) 1159
CaiI CAGNNNCTG 1 cut(s) 1522
CfoI GCGC 1 cut(s) 716
Cfr13I GGNCC 1 cut(s) 1387
ClaI ATCGAT 1 cut(s) 733
CseI GACGC 1 cut(s) 1031
Csp6I GTAC 4 cut(s) 174, 1002, 1330, 1395
CviAII CATG 7 cut(s) 31, 317, 349, 640, 830, 1100, 1344
CviQI GTAC 4 cut(s) 174, 1002, 1330, 1395
DdeI CTNAG 3 cut(s) 219, 690, 1260
DraIII CACNNNGTG 1 cut(s) 1199
Eam1104I CTCTTC 1 cut(s) 272
EarI CTCTTC 1 cut(s) 272
EciI GGCGGA 1 cut(s) 613
Ecl136II GAGCTC 1 cut(s) 1408
Eco130I CCWWGG 2 cut(s) 574, 1343
Eco24I GRGCYC 1 cut(s) 1410
Eco31I GGTCTC 1 cut(s) 1360
Eco32I GATATC 1 cut(s) 130
Eco47I GGWCC 1 cut(s) 1387
Eco53kI GAGCTC 1 cut(s) 1408
Eco88I CYCGRG 1 cut(s) 1390
Eco91I GGTNACC 1 cut(s) 798
EcoICRI GAGCTC 1 cut(s) 1408
EcoNI CCTNNNNNAGG 1 cut(s) 620
EcoO109I RGGNCCY 1 cut(s) 1387
EcoO65I GGTNACC 1 cut(s) 798
EcoRI GAATTC 2 cut(s) 287, 1271
EcoRII CCWGG 5 cut(s) 192, 334, 355, 760, 1369
EcoRV GATATC 1 cut(s) 130
EcoT14I CCWWGG 2 cut(s) 574, 1343
EcoT38I GRGCYC 1 cut(s) 1410
ErhI CCWWGG 2 cut(s) 574, 1343
FaeI CATG 7 cut(s) 34, 320, 352, 643, 833, 1103, 1347
FalI AAGNNNNNCTT 2 cut(s) 426, 458
FaqI GGGAC 3 cut(s) 89, 1034, 1373
FatI CATG 7 cut(s) 30, 316, 348, 639, 829, 1099, 1343
FbaI TGATCA 2 cut(s) 345, 1081
FblI GTMKAC 2 cut(s) 535, 867
Fnu4HI GCNGC 5 cut(s) 183, 717, 816, 1107, 1257
FokI GGATG 5 cut(s) 288, 557, 991, 1222, 1397
FriOI GRGCYC 1 cut(s) 1410
Fsp4HI GCNGC 5 cut(s) 183, 717, 816, 1107, 1257
FspBI CTAG 3 cut(s) 650, 1158, 1196
GlaI GCGC 1 cut(s) 715
GluI GCNGC 5 cut(s) 183, 717, 816, 1107, 1257
GsaI CCCAGC 1 cut(s) 1155
GsuI CTGGAG 2 cut(s) 176, 357
HapII CCGG 1 cut(s) 1087
HgaI GACGC 1 cut(s) 1031
HhaI GCGC 1 cut(s) 716
Hin1II CATG 7 cut(s) 34, 320, 352, 643, 833, 1103, 1347
Hin6I GCGC 1 cut(s) 714
HinP1I GCGC 1 cut(s) 714
HincII GTYRAC 1 cut(s) 1266
HindII GTYRAC 1 cut(s) 1266
HinfI GANTC 4 cut(s) 4, 653, 1090, 1374
HpaII CCGG 1 cut(s) 1087
HphI GGTGA 3 cut(s) 792, 1076, 1211
Hpy166II GTNNAC 7 cut(s) 161, 536, 868, 1266, 1323, 1330, 1498
Hpy188I TCNGA 9 cut(s) 245, 300, 677, 758, 1114, 1209, 1415, 1456, 1518
Hpy188III TCNNGA 7 cut(s) 443, 607, 857, 919, 1168, 1390, 1490
Hpy8I GTNNAC 7 cut(s) 161, 536, 868, 1266, 1323, 1330, 1498
Hpy99I CGWCG 1 cut(s) 368
HpyAV CCTTC 9 cut(s) 118, 789, 854, 1109, 1165, 1196, 1246, 1352, 1356
HpyCH4III ACNGT 3 cut(s) 514, 1283, 1327
HpyCH4IV ACGT 1 cut(s) 363
HpyF10VI GCNNNNNNNGC 3 cut(s) 576, 695, 1256
HpyF3I CTNAG 3 cut(s) 219, 690, 1260
HpySE526I ACGT 1 cut(s) 363
Hsp92II CATG 7 cut(s) 34, 320, 352, 643, 833, 1103, 1347
HspAI GCGC 1 cut(s) 714
KflI GGGWCCC 1 cut(s) 1387
Ksp22I TGATCA 2 cut(s) 345, 1081
LmnI GCTCC 1 cut(s) 11
Lsp1109I GCAGC 4 cut(s) 169, 802, 1093, 1268
LweI GCATC 5 cut(s) 266, 579, 817, 1118, 1465
MaeI CTAG 3 cut(s) 650, 1158, 1196
MaeII ACGT 1 cut(s) 363
MaeIII GTNAC 3 cut(s) 26, 149, 798
MboII GAAGA 8 cut(s) 259, 332, 434, 446, 845, 933, 1256, 1484
MfeI CAATTG 1 cut(s) 1430
MflI RGATCY 2 cut(s) 88, 1027
MhlI GDGCHC 3 cut(s) 1288, 1325, 1410
MlyI GAGTC 2 cut(s) 662, 1084
MmeI TCCRAC 4 cut(s) 381, 781, 979, 1187
MnlI CCTC 8 cut(s) 172, 273, 397, 400, 510, 616, 645, 1512
MroXI GAANNNNTTC 2 cut(s) 258, 327
MseI TTAA 7 cut(s) 41, 309, 821, 1035, 1229, 1466, 1505
MspI CCGG 1 cut(s) 1087
MspR9I CCNGG 5 cut(s) 194, 336, 357, 762, 1371
MunI CAATTG 1 cut(s) 1430
MvaI CCWGG 5 cut(s) 194, 336, 357, 762, 1371
MvnI CGCG 1 cut(s) 716
MwoI GCNNNNNNNGC 3 cut(s) 576, 695, 1256
NcoI CCATGG 1 cut(s) 1343
NheI GCTAGC 1 cut(s) 1157
NlaIII CATG 7 cut(s) 34, 320, 352, 643, 833, 1103, 1347
NlaIV GGNNCC 5 cut(s) 354, 456, 1388, 1389, 1453
NmuCI GTSAC 2 cut(s) 149, 798
PdmI GAANNNNTTC 2 cut(s) 258, 327
PfeI GAWTC 2 cut(s) 4, 1374
PfoI TCCNGGA 1 cut(s) 192
PkrI GCNGC 5 cut(s) 184, 718, 817, 1108, 1258
PleI GAGTC 2 cut(s) 661, 1084
PpsI GAGTC 2 cut(s) 661, 1084
PpuMI RGGWCCY 1 cut(s) 1387
Psp124BI GAGCTC 1 cut(s) 1410
Psp5II RGGWCCY 1 cut(s) 1387
Psp6I CCWGG 5 cut(s) 192, 334, 355, 760, 1369
PspEI GGTNACC 1 cut(s) 798
PspFI CCCAGC 1 cut(s) 1151
PspGI CCWGG 5 cut(s) 192, 334, 355, 760, 1369
PspN4I GGNNCC 5 cut(s) 354, 456, 1388, 1389, 1453
PspPI GGNCC 1 cut(s) 1387
PspPPI RGGWCCY 1 cut(s) 1387
PstNI CAGNNNCTG 1 cut(s) 1522
PsuI RGATCY 2 cut(s) 88, 1027
RsaI GTAC 4 cut(s) 175, 1003, 1331, 1396
RsaNI GTAC 4 cut(s) 174, 1002, 1330, 1395
SacI GAGCTC 1 cut(s) 1410
SaqAI TTAA 7 cut(s) 41, 309, 821, 1035, 1229, 1466, 1505
SatI GCNGC 5 cut(s) 183, 717, 816, 1107, 1257
Sau96I GGNCC 1 cut(s) 1387
SchI GAGTC 2 cut(s) 662, 1084
ScrFI CCNGG 5 cut(s) 194, 336, 357, 762, 1371
SduI GDGCHC 3 cut(s) 1288, 1325, 1410
SfaNI GCATC 5 cut(s) 266, 579, 817, 1118, 1465
SinI GGWCC 1 cut(s) 1387
SmlI CTYRAG 2 cut(s) 443, 1287
SmoI CTYRAG 2 cut(s) 443, 1287
SsiI CCGC 2 cut(s) 598, 716
SspI AATATT 1 cut(s) 1464
SspMI CTAG 3 cut(s) 650, 1158, 1196
SstI GAGCTC 1 cut(s) 1410
StyD4I CCNGG 5 cut(s) 192, 334, 355, 760, 1369
StyI CCWWGG 2 cut(s) 574, 1343
TaaI ACNGT 3 cut(s) 514, 1283, 1327
TaiI ACGT 1 cut(s) 366
TaqI TCGA 7 cut(s) 56, 281, 733, 934, 978, 1169, 1445
TatI WGTACW 2 cut(s) 1001, 1329
TauI GCSGC 1 cut(s) 719
TfiI GAWTC 2 cut(s) 4, 1374
Tru1I TTAA 7 cut(s) 41, 309, 821, 1035, 1229, 1466, 1505
Tru9I TTAA 7 cut(s) 41, 309, 821, 1035, 1229, 1466, 1505
TscAI CASTG 1 cut(s) 1540
TseFI GTSAC 2 cut(s) 149, 798
TseI GCWGC 4 cut(s) 182, 815, 1106, 1256
Tsp45I GTSAC 2 cut(s) 149, 798
TspDTI ATGAA 8 cut(s) 119, 280, 333, 656, 659, 846, 1088, 1431
TspGWI ACGGA 3 cut(s) 122, 191, 741
TspRI CASTG 1 cut(s) 1540
VneI GTGCAC 1 cut(s) 1321
VpaK11BI GGWCC 1 cut(s) 1387
XagI CCTNNNNNAGG 1 cut(s) 620
XapI RAATTY 8 cut(s) 198, 287, 323, 495, 1066, 1225, 1271, 1485
XmiI GTMKAC 2 cut(s) 535, 867
XmnI GAANNNNTTC 2 cut(s) 258, 327
XspI CTAG 3 cut(s) 650, 1158, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.