Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0001124

Physical Location & Seq

Genomic Coordinates Forward (+)

20922261 .. 20935798

Gene Structure 13538 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g29992.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTCGTCCGGTACCAGTTTGTCATCAGCTTCGACCAAGTACAGGAATTTTAAAGAAATCACGCGCCACCGATTATTGAATGAAATGCTTCGGTCTTGCAAAACTTGGAACTCAAAATCAACATGGAAGGTACTCGTTATGGATGAATTTACTGTCAAGATAATGTCTCACGCATGCACAGTCGTTGATACTACAAATGAAGGTGTTTCATTGCTTGAGCGCATAGATAAAAAAAGGCAGCGATTGCCATCTATGGATGCAATATATTTTATCCGGCCTTCTAAAGAAAATGTTAGATTCTTCTTGTCAGACATGTCGGGAGGCGTACCTTTCTATAGGAAGGCGTTTGTTTTCTTCACTTCACCGATATCCAAGCATTTGGTTGGGCAGATCAAGGCGGATGCAAGTCTAAGAAGCCGCATATCTGCATTGAGTGAGATGAACCTGGAGTACTATGCTATAGATAGCCAGGGTTTTGTTACCAATAACCAGAGAGCTTTACAGCAGCTGTATGGGGACAAGGACGATTCACGCGAAGCTGAAGCATGTTTGAATGAGATGGCTGCACGTGTTGCCACAGTCTTTGCTTCATTAAGGGAACTTCCTGTTGTTCACTACCGAGCTGCCAATAGGTTTGATGCCACCGTGGAGACCACTTTTTGTGATTTGATTCCTACAAAGCTTGCTGCTGGTATCTGGGATTCTCTCATGCATTACAAGAGAACAATTCCAGATTTCCCTCAGAGAGAAACTTGCGAGTTACTTATCCTTGACAGATCCGTGGATCAGATTGCGCCAATCATACACGAATGGACATATGATGCCTTGTGTCATGACTTGTTAGAAATGGAAGGAAATAAATATGTTCACGAGGTTGCAAACATAACTGGTGGTCCTCCTGACAAGAAAGATGTTCTTCTAGACGAGTGTGATCCTGTCTGGCTTGAGCTTCGCGATCGTCATTTAGGATTTGCCTTGGAATGGTTAAAGTCAGAACTTTCCAGTCTTAAGCAGAATAAGGTTGCACGATTCGAAAATTCAAGAGATGGGCAATCTCCTGAGGTATCCTCGAGGGAATTGAAAGACATAACTGAAGCATTGCCACAGTATCTTGAACTAAAAGAGAAGCTCTCCCTTCATATAGAGATTGCATCGAAACTAAACACAATTGTCAGGAACTTCAAGCTTCCGTTCCTTTCGGAGCTGGAGCAGAGTCTGGTTTATGGTGATGCAGGAATAAGAGAAGTGATAATGTTTCTGAGAATACACGGGCCGTCTATTGGTCGCGAACATATGCTGCGCTTGTTGATGATTGCTGCTGCCATTTATCCTGAGTTTTTGAAGGACGGGGGATATTTACAGATGATGATGAAGCATGCGAATTTACTACCCCAGGATATGACTGCTGTGAGGAATATGAAGTTGATTGGGAAGGGCCAAGAAGGCTCATCTGGAATCTTTCCTATGAAGTTTGGTATTGCCAAGAGAGAACGGTATAGGAAAGAGCGTCCAAGAGAAGATGAATGGCGTTATTCGCGGTTTTCTCCGATGATAGAGGAACTCATAGAAAAGCTTAGCAATGGTGCACTGTCAGAGGAGTTGTATCCTTGTGTGAATCCCAACGCTTGTGTACCGAAATCGAGGAGGACACCAACGTGGGCCCACCGTCGGACTTCTGATGATGGGCTCTCAAGGTATGCATCCAGTGGTTATGAAAAGATGGGCCAACGGATCTTTGTAGTTATAGTAGGTGGAGCTACTAGATCAGAGCTTAGGGTGTGCCATAAGCTCACAGCTAAGCTCAAAAGGGAAGTTATTCTGGGCTCATCATCTCTGGACGATCCTGCATCTTTTGTTACGAGAACAAGCCGCTCATGTTGGATGATGTACAGATCTGACTATGGAAGTTCAACAAATTTTTTTTTTTTTTTTTTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0016020 GO:0019898 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04721 map04721

Pfam Domains

Protein Families

Sec1

Protein Analysis

646

Amino Acids

73.93

Weight (kDa)

8.74

Isoelectric Point (pI)

51.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	43 - 609	7.3e-106	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12360 AT4G12120
fragaria_vesca	FvH4_2g27020 FvH4_2g27020 FvH4_2g27020 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992
malus_domestica	MD04G1079000.v1.1 MD06G1073800.v1.1
prunus_persica	Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1
pyrus_communis	pycom04g07080 pycom06g05270
rosa_chinensis	RchiOBHm_Chr5g0038751 RchiOBHm_Chr6g0295901 RchiOBHm_Chr7g0201411
rosa_laevigata	RLG00000003677 RLG00000011758 RLG00000033865
rosa_multiflora	Rmu_sc0001469.1_g000008 Rmu_sc0005722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042410 Rroxscaffold_3G00255300 Rroxscaffold_7G00172070
rosa_rugosa	Rorug05G0173300.1 Rorug05G0173400 Rorug05G0173500 Rorug06G0255000 Rorug06G0255000 Rorug07G0063400 Rorug07G0063500
rosa_samantha	Rh5AG260700 Rh5BG264400 Rh5CG297100 Rh5DG272800 Rh6AG368700 Rh6BG376400 Rh6CG382600 Rh6DG369200 Rh7AG190300 Rh7BG192700 Rh7CG201800 Rh7DG195300
rosa_wichuraiana	Rw5G024070 Rw5G024360 Rw6G032150 Rw7G016710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	1069
Acc65I	GGTACC	1 cut(s)	11
AccB1I	GGYRCC	1 cut(s)	11
AccBSI	CCGCTC	1 cut(s)	1872
AccII	CGCG	5 cut(s)	64, 534, 954, 1287, 1537
AciI	CCGC	4 cut(s)	398, 418, 1537, 1870
AclWI	GGATC	5 cut(s)	771, 792, 926, 1739, 1835
AcsI	RAATTY	5 cut(s)	46, 146, 1036, 1381, 1915
AcuI	CTGAAG	2 cut(s)	561, 1113
AcvI	CACGTG	1 cut(s)	569
AfaI	GTAC	7 cut(s)	13, 41, 132, 327, 452, 1632, 1889
AfiI	CCNNNNNNNGG	4 cut(s)	42, 981, 1280, 1668
AflII	CTTAAG	1 cut(s)	1007
AflIII	ACRYGT	2 cut(s)	312, 568
AgsI	TTSAA	8 cut(s)	79, 553, 1041, 1081, 1115, 1183, 1342, 1911
AjnI	CCWGG	3 cut(s)	444, 468, 1392
AleI	CACNNNNGTG	1 cut(s)	1654
Alw21I	GWGCWC	1 cut(s)	1588
Alw26I	GTCTC	2 cut(s)	171, 644
Alw44I	GTGCAC	1 cut(s)	1584
AlwI	GGATC	5 cut(s)	771, 792, 926, 1739, 1835
AlwNI	CAGNNNCTG	2 cut(s)	508, 1216
Ama87I	CYCGRG	1 cut(s)	1069
AoxI	GGCC	5 cut(s)	275, 1271, 1435, 1659, 1723
ApaI	GGGCCC	1 cut(s)	1663
ApaLI	GTGCAC	1 cut(s)	1584
ApeKI	GCWGC	8 cut(s)	238, 505, 563, 623, 686, 1297, 1316, 1319
ApoI	RAATTY	5 cut(s)	46, 146, 1036, 1381, 1915
Asp700I	GAANNNNTTC	2 cut(s)	87, 1815
Asp718I	GGTACC	1 cut(s)	11
AspLEI	GCGC	4 cut(s)	66, 222, 796, 1302
AspS9I	GGNCC	6 cut(s)	893, 1271, 1435, 1659, 1660, 1723
AsuHPI	GGTGA	2 cut(s)	354, 1238
AsuII	TTCGAA	1 cut(s)	1032
AvaI	CYCGRG	1 cut(s)	1069
AvaII	GGWCC	1 cut(s)	893
AxyI	CCTNAGG	1 cut(s)	1059
BaeGI	GKGCMC	2 cut(s)	1588, 1663
BanI	GGYRCC	1 cut(s)	11
BanII	GRGCYC	3 cut(s)	1663, 1689, 1826
BauI	CACGAG	1 cut(s)	869
BbrPI	CACGTG	1 cut(s)	569
Bbv12I	GWGCWC	1 cut(s)	1588
BbvI	GCAGC	8 cut(s)	250, 517, 550, 610, 673, 1284, 1303, 1306
BccI	CCATC	5 cut(s)	256, 553, 1040, 1676, 1714
BceAI	ACGGC	1 cut(s)	1258
BciT130I	CCWGG	3 cut(s)	446, 470, 1394
BciVI	GTATCC	2 cut(s)	1075, 1614
BcoDI	GTCTC	2 cut(s)	171, 644
BfaI	CTAG	2 cut(s)	920, 1761
BfmI	CTRYAG	2 cut(s)	334, 459
BfrI	CTTAAG	1 cut(s)	1007
BfuI	GTATCC	2 cut(s)	1075, 1614
BglI	GCCNNNNNGGC	1 cut(s)	1443
BglII	AGATCT	1 cut(s)	1892
BlpI	GCTNAGC	2 cut(s)	1574, 1797
BmcAI	AGTACT	1 cut(s)	452
Bme1390I	CCNGG	3 cut(s)	446, 470, 1394
Bme18I	GGWCC	1 cut(s)	893
BmeT110I	CYCGRG	1 cut(s)	1069
BmgT120I	GGNCC	6 cut(s)	893, 1271, 1435, 1659, 1660, 1723
BmiI	GGNNCC	2 cut(s)	13, 1661
BmrFI	CCNGG	3 cut(s)	446, 470, 1394
BmsI	GCATC	8 cut(s)	247, 391, 628, 811, 1160, 1219, 1709, 1856
BplI	GAGNNNNNCTC	4 cut(s)	1052, 1084, 1115, 1147
BpmI	CTGGAG	2 cut(s)	467, 1226
Bpu10I	CCTNAGC	1 cut(s)	1772
Bpu1102I	GCTNAGC	2 cut(s)	1574, 1797
Bpu14I	TTCGAA	1 cut(s)	1032
BpuEI	CTTGAG	3 cut(s)	236, 965, 1675
BsaAI	YACGTR	1 cut(s)	569
BsaBI	GATNNNNATC	1 cut(s)	247
BsaI	GGTCTC	1 cut(s)	644
BsaJI	CCNNGG	5 cut(s)	469, 645, 780, 975, 1392
BsaWI	WCCGGW	1 cut(s)	8
Bsc4I	CCNNNNNNNGG	4 cut(s)	42, 981, 1280, 1668
Bse1I	ACTGG	4 cut(s)	15, 892, 1002, 1704
Bse21I	CCTNAGG	1 cut(s)	1059
Bse3DI	GCAATG	3 cut(s)	209, 1097, 1585
Bse8I	GATNNNNATC	1 cut(s)	247
BseBI	CCWGG	3 cut(s)	446, 470, 1394
BseDI	CCNNGG	5 cut(s)	469, 645, 780, 975, 1392
BseGI	GGATG	5 cut(s)	148, 262, 406, 1700, 1887
BseJI	GATNNNNATC	1 cut(s)	247
BseLI	CCNNNNNNNGG	4 cut(s)	42, 981, 1280, 1668
BseMI	GCAATG	3 cut(s)	209, 1097, 1585
BseMII	CTCAG	4 cut(s)	755, 1050, 1250, 1323
BseNI	ACTGG	4 cut(s)	15, 892, 1002, 1704
BseRI	GAGGAG	2 cut(s)	1610, 1657
BseSI	GKGCMC	2 cut(s)	1588, 1663
BseXI	GCAGC	8 cut(s)	250, 517, 550, 610, 673, 1284, 1303, 1306
BsgI	GTGCAG	1 cut(s)	549
Bsh1236I	CGCG	5 cut(s)	64, 534, 954, 1287, 1537
Bsh1285I	CGRYCG	1 cut(s)	958
BshFI	GGCC	5 cut(s)	277, 1273, 1437, 1661, 1725
BshNI	GGYRCC	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	958
BsiHKAI	GWGCWC	1 cut(s)	1588
BsiHKCI	CYCGRG	1 cut(s)	1069
BsiSI	CCGG	2 cut(s)	9, 274
BslFI	GGGAC	1 cut(s)	530
BslI	CCNNNNNNNGG	4 cut(s)	42, 981, 1280, 1668
BsmAI	GTCTC	2 cut(s)	171, 644
BsmFI	GGGAC	1 cut(s)	530
BsnI	GGCC	5 cut(s)	277, 1273, 1437, 1661, 1725
Bso31I	GGTCTC	1 cut(s)	644
BsoBI	CYCGRG	1 cut(s)	1069
Bsp119I	TTCGAA	1 cut(s)	1032
Bsp120I	GGGCCC	1 cut(s)	1659
Bsp1286I	GDGCHC	4 cut(s)	1588, 1663, 1689, 1826
Bsp1407I	TGTACA	1 cut(s)	1887
Bsp143I	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
Bsp1720I	GCTNAGC	2 cut(s)	1574, 1797
Bsp68I	TCGCGA	2 cut(s)	954, 1287
BspACI	CCGC	4 cut(s)	398, 418, 1537, 1870
BspANI	GGCC	5 cut(s)	277, 1273, 1437, 1661, 1725
BspCNI	CTCAG	4 cut(s)	754, 1051, 1251, 1324
BspFNI	CGCG	5 cut(s)	64, 534, 954, 1287, 1537
BspHI	TCATGA	1 cut(s)	832
BspLI	GGNNCC	2 cut(s)	13, 1661
BspPI	GGATC	5 cut(s)	771, 792, 926, 1739, 1835
BspT104I	TTCGAA	1 cut(s)	1032
BspT107I	GGYRCC	1 cut(s)	11
BspTI	CTTAAG	1 cut(s)	1007
BspTNI	GGTCTC	1 cut(s)	644
BsrBI	CCGCTC	1 cut(s)	1872
BsrDI	GCAATG	3 cut(s)	209, 1097, 1585
BsrGI	TGTACA	1 cut(s)	1887
BsrI	ACTGG	4 cut(s)	15, 892, 1002, 1704
BssECI	CCNNGG	5 cut(s)	469, 645, 780, 975, 1392
BssMI	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
BssSI	CACGAG	1 cut(s)	869
BssT1I	CCWWGG	1 cut(s)	975
Bst2BI	CACGAG	1 cut(s)	869
Bst2UI	CCWGG	3 cut(s)	446, 470, 1394
Bst4CI	ACNGT	8 cut(s)	154, 181, 580, 646, 1107, 1494, 1590, 1667
BstAFI	CTTAAG	1 cut(s)	1007
BstAPI	GCANNNNNTGC	2 cut(s)	244, 572
BstAUI	TGTACA	1 cut(s)	1887
BstBAI	YACGTR	1 cut(s)	569
BstBI	TTCGAA	1 cut(s)	1032
BstC8I	GCNNGC	3 cut(s)	175, 684, 1377
BstDEI	CTNAG	8 cut(s)	410, 741, 1059, 1259, 1332, 1574, 1772, 1797
BstDSI	CCRYGG	2 cut(s)	645, 780
BstF5I	GGATG	5 cut(s)	148, 262, 406, 1700, 1887
BstFNI	CGCG	5 cut(s)	64, 534, 954, 1287, 1537
BstHHI	GCGC	4 cut(s)	66, 222, 796, 1302
BstKTI	GATC	9 cut(s)	393, 779, 787, 934, 958, 1734, 1766, 1843, 1895
BstMAI	GTCTC	2 cut(s)	171, 644
BstMBI	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
BstMCI	CGRYCG	1 cut(s)	958
BstMWI	GCNNNNNNNGC	4 cut(s)	244, 572, 1443, 1534
BstNI	CCWGG	3 cut(s)	446, 470, 1394
BstNSI	RCATGY	4 cut(s)	177, 316, 549, 1379
BstSCI	CCNGG	3 cut(s)	444, 468, 1392
BstSFI	CTRYAG	2 cut(s)	334, 459
BstSLI	GKGCMC	2 cut(s)	1588, 1663
BstUI	CGCG	5 cut(s)	64, 534, 954, 1287, 1537
BstV1I	GCAGC	8 cut(s)	250, 517, 550, 610, 673, 1284, 1303, 1306
BstX2I	RGATCY	3 cut(s)	776, 1731, 1892
BstXI	CCANNNNNNTGG	1 cut(s)	379
BstYI	RGATCY	3 cut(s)	776, 1731, 1892
Bsu36I	CCTNAGG	1 cut(s)	1059
BsuI	GTATCC	2 cut(s)	1075, 1614
BsuRI	GGCC	5 cut(s)	277, 1273, 1437, 1661, 1725
BtgI	CCRYGG	2 cut(s)	645, 780
BtsCI	GGATG	5 cut(s)	148, 262, 406, 1700, 1887
BtsIMutI	CAGTG	2 cut(s)	1586, 1711
BtuMI	TCGCGA	2 cut(s)	954, 1287
Cac8I	GCNNGC	3 cut(s)	175, 684, 1377
CaiI	CAGNNNCTG	2 cut(s)	508, 1216
CciI	TCATGA	1 cut(s)	832
CfoI	GCGC	4 cut(s)	66, 222, 796, 1302
Cfr13I	GGNCC	6 cut(s)	893, 1271, 1435, 1659, 1660, 1723
CseI	GACGC	1 cut(s)	1496
Csp6I	GTAC	7 cut(s)	12, 40, 131, 326, 451, 1631, 1888
CspCI	CAANNNNNGTGG	2 cut(s)	565, 600
CviAII	CATG	8 cut(s)	123, 174, 313, 546, 709, 833, 1376, 1875
CviQI	GTAC	7 cut(s)	12, 40, 131, 326, 451, 1631, 1888
DdeI	CTNAG	8 cut(s)	410, 741, 1059, 1259, 1332, 1574, 1772, 1797
DpnI	GATC	9 cut(s)	392, 778, 786, 933, 957, 1733, 1765, 1842, 1894
DpnII	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
DraI	TTTAAA	1 cut(s)	52
EciI	GGCGGA	1 cut(s)	413
Eco130I	CCWWGG	1 cut(s)	975
Eco24I	GRGCYC	3 cut(s)	1663, 1689, 1826
Eco31I	GGTCTC	1 cut(s)	644
Eco32I	GATATC	1 cut(s)	369
Eco47I	GGWCC	1 cut(s)	893
Eco57I	CTGAAG	2 cut(s)	561, 1113
Eco72I	CACGTG	1 cut(s)	569
Eco81I	CCTNAGG	1 cut(s)	1059
Eco88I	CYCGRG	1 cut(s)	1069
EcoRII	CCWGG	3 cut(s)	444, 468, 1392
EcoRV	GATATC	1 cut(s)	369
EcoT14I	CCWWGG	1 cut(s)	975
EcoT22I	ATGCAT	2 cut(s)	714, 1702
EcoT38I	GRGCYC	3 cut(s)	1663, 1689, 1826
ErhI	CCWWGG	1 cut(s)	975
FaeI	CATG	8 cut(s)	126, 177, 316, 549, 712, 836, 1379, 1878
FalI	AAGNNNNNCTT	2 cut(s)	900, 932
FaqI	GGGAC	1 cut(s)	530
FatI	CATG	8 cut(s)	122, 173, 312, 545, 708, 832, 1375, 1874
FauNDI	CATATG	2 cut(s)	817, 1293
FokI	GGATG	5 cut(s)	155, 269, 413, 1687, 1894
FriOI	GRGCYC	3 cut(s)	1663, 1689, 1826
FspBI	CTAG	2 cut(s)	920, 1761
GlaI	GCGC	4 cut(s)	65, 221, 795, 1301
GsuI	CTGGAG	2 cut(s)	467, 1226
HaeIII	GGCC	5 cut(s)	277, 1273, 1437, 1661, 1725
HapII	CCGG	2 cut(s)	9, 274
HgaI	GACGC	1 cut(s)	1496
HhaI	GCGC	4 cut(s)	66, 222, 796, 1302
Hin1II	CATG	8 cut(s)	126, 177, 316, 549, 712, 836, 1379, 1878
Hin6I	GCGC	4 cut(s)	64, 220, 794, 1300
HinP1I	GCGC	4 cut(s)	64, 220, 794, 1300
HindIII	AAGCTT	3 cut(s)	680, 1184, 1571
HinfI	GANTC	8 cut(s)	297, 527, 670, 701, 1029, 1213, 1455, 1615
HpaII	CCGG	2 cut(s)	9, 274
HphI	GGTGA	2 cut(s)	354, 1238
Hpy166II	GTNNAC	4 cut(s)	613, 868, 1586, 1631
Hpy8I	GTNNAC	4 cut(s)	613, 868, 1586, 1631
Hpy99I	CGWCG	1 cut(s)	1671
HpyAV	CCTTC	9 cut(s)	121, 194, 288, 334, 845, 1145, 1336, 1426, 1436
HpyCH4III	ACNGT	8 cut(s)	154, 181, 580, 646, 1107, 1494, 1590, 1667
HpyCH4IV	ACGT	2 cut(s)	568, 1655
HpyF10VI	GCNNNNNNNGC	4 cut(s)	244, 572, 1443, 1534
HpyF3I	CTNAG	8 cut(s)	410, 741, 1059, 1259, 1332, 1574, 1772, 1797
HpySE526I	ACGT	2 cut(s)	568, 1655
Hsp92II	CATG	8 cut(s)	126, 177, 316, 549, 712, 836, 1379, 1878
HspAI	GCGC	4 cut(s)	64, 220, 794, 1300
KpnI	GGTACC	1 cut(s)	15
Kzo9I	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
LmnI	GCTCC	3 cut(s)	1201, 1207, 1754
Lsp1109I	GCAGC	8 cut(s)	250, 517, 550, 610, 673, 1284, 1303, 1306
LweI	GCATC	8 cut(s)	247, 391, 628, 811, 1160, 1219, 1709, 1856
MaeI	CTAG	2 cut(s)	920, 1761
MaeII	ACGT	2 cut(s)	568, 1655
MaeIII	GTNAC	3 cut(s)	478, 759, 1855
MalI	GATC	9 cut(s)	392, 778, 786, 933, 957, 1733, 1765, 1842, 1894
MbiI	CCGCTC	1 cut(s)	1872
MboI	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
MboII	GAAGA	4 cut(s)	292, 346, 908, 1529
MfeI	CAATTG	1 cut(s)	1167
MflI	RGATCY	3 cut(s)	776, 1731, 1892
MhlI	GDGCHC	4 cut(s)	1588, 1663, 1689, 1826
MluCI	AATT	8 cut(s)	46, 146, 726, 1036, 1076, 1167, 1381, 1915
MlyI	GAGTC	1 cut(s)	1222
MmeI	TCCRAC	2 cut(s)	1649, 1859
Mph1103I	ATGCAT	2 cut(s)	714, 1702
MroXI	GAANNNNTTC	2 cut(s)	87, 1815
MseI	TTAA	4 cut(s)	51, 593, 986, 1008
MslI	CAYNNNNRTG	1 cut(s)	1654
MspA1I	CMGCKG	1 cut(s)	508
MspCI	CTTAAG	1 cut(s)	1007
MspI	CCGG	2 cut(s)	9, 274
MspR9I	CCNGG	3 cut(s)	446, 470, 1394
MunI	CAATTG	1 cut(s)	1167
MvaI	CCWGG	3 cut(s)	446, 470, 1394
MvnI	CGCG	5 cut(s)	64, 534, 954, 1287, 1537
MwoI	GCNNNNNNNGC	4 cut(s)	244, 572, 1443, 1534
NdeI	CATATG	2 cut(s)	817, 1293
NdeII	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
NlaIII	CATG	8 cut(s)	126, 177, 316, 549, 712, 836, 1379, 1878
NlaIV	GGNNCC	2 cut(s)	13, 1661
NruI	TCGCGA	2 cut(s)	954, 1287
NsiI	ATGCAT	2 cut(s)	714, 1702
NspI	RCATGY	4 cut(s)	177, 316, 549, 1379
NspV	TTCGAA	1 cut(s)	1032
OliI	CACNNNNGTG	1 cut(s)	1654
PaeI	GCATGC	2 cut(s)	177, 1379
PaeR7I	CTCGAG	1 cut(s)	1069
PagI	TCATGA	1 cut(s)	832
PciI	ACATGT	1 cut(s)	312
PcsI	WCGNNNNNNNCGW	1 cut(s)	531
PdmI	GAANNNNTTC	2 cut(s)	87, 1815
PfeI	GAWTC	7 cut(s)	297, 527, 670, 701, 1029, 1455, 1615
Ple19I	CGATCG	1 cut(s)	958
PleI	GAGTC	1 cut(s)	1221
PmaCI	CACGTG	1 cut(s)	569
PmlI	CACGTG	1 cut(s)	569
PpsI	GAGTC	1 cut(s)	1221
Ppu21I	YACGTR	1 cut(s)	569
PscI	ACATGT	1 cut(s)	312
Psp6I	CCWGG	3 cut(s)	444, 468, 1392
PspCI	CACGTG	1 cut(s)	569
PspGI	CCWGG	3 cut(s)	444, 468, 1392
PspN4I	GGNNCC	2 cut(s)	13, 1661
PspOMI	GGGCCC	1 cut(s)	1659
PspPI	GGNCC	6 cut(s)	893, 1271, 1435, 1659, 1660, 1723
PspXI	VCTCGAGB	1 cut(s)	1069
PsrI	GAACNNNNNNTAC	2 cut(s)	434, 466
PstNI	CAGNNNCTG	2 cut(s)	508, 1216
PsuI	RGATCY	3 cut(s)	776, 1731, 1892
PvuI	CGATCG	1 cut(s)	958
PvuII	CAGCTG	1 cut(s)	508
RruI	TCGCGA	2 cut(s)	954, 1287
RsaI	GTAC	7 cut(s)	13, 41, 132, 327, 452, 1632, 1889
RsaNI	GTAC	7 cut(s)	12, 40, 131, 326, 451, 1631, 1888
RseI	CAYNNNNRTG	1 cut(s)	1654
SaqAI	TTAA	4 cut(s)	51, 593, 986, 1008
Sau3AI	GATC	9 cut(s)	390, 776, 784, 931, 955, 1731, 1763, 1840, 1892
Sau96I	GGNCC	6 cut(s)	893, 1271, 1435, 1659, 1660, 1723
ScaI	AGTACT	1 cut(s)	452
SchI	GAGTC	1 cut(s)	1222
ScrFI	CCNGG	3 cut(s)	446, 470, 1394
SduI	GDGCHC	4 cut(s)	1588, 1663, 1689, 1826
SfaNI	GCATC	8 cut(s)	247, 391, 628, 811, 1160, 1219, 1709, 1856
SfcI	CTRYAG	2 cut(s)	334, 459
Sfr274I	CTCGAG	1 cut(s)	1069
SfuI	TTCGAA	1 cut(s)	1032
SinI	GGWCC	1 cut(s)	893
SlaI	CTCGAG	1 cut(s)	1069
SmiMI	CAYNNNNRTG	1 cut(s)	1654
SmlI	CTYRAG	5 cut(s)	215, 944, 1007, 1069, 1690
SmoI	CTYRAG	5 cut(s)	215, 944, 1007, 1069, 1690
SphI	GCATGC	2 cut(s)	177, 1379
Sse9I	AATT	8 cut(s)	46, 146, 726, 1036, 1076, 1167, 1381, 1915
SsiI	CCGC	4 cut(s)	398, 418, 1537, 1870
SspMI	CTAG	2 cut(s)	920, 1761
StyD4I	CCNGG	3 cut(s)	444, 468, 1392
StyI	CCWWGG	1 cut(s)	975
TaaI	ACNGT	8 cut(s)	154, 181, 580, 646, 1107, 1494, 1590, 1667
TaiI	ACGT	2 cut(s)	571, 1658
TaqI	TCGA	5 cut(s)	32, 1032, 1070, 1154, 1640
TaqII	GACCGA	1 cut(s)	81
TasI	AATT	8 cut(s)	46, 146, 726, 1036, 1076, 1167, 1381, 1915
TatI	WGTACW	3 cut(s)	39, 450, 1887
TauI	GCSGC	2 cut(s)	420, 1872
TfiI	GAWTC	7 cut(s)	297, 527, 670, 701, 1029, 1455, 1615
Tru1I	TTAA	4 cut(s)	51, 593, 986, 1008
Tru9I	TTAA	4 cut(s)	51, 593, 986, 1008
TscAI	CASTG	2 cut(s)	1593, 1711
TseI	GCWGC	8 cut(s)	238, 505, 563, 623, 686, 1297, 1316, 1319
TspGWI	ACGGA	3 cut(s)	769, 1179, 1744
TspRI	CASTG	2 cut(s)	1593, 1711
Vha464I	CTTAAG	1 cut(s)	1007
VneI	GTGCAC	1 cut(s)	1584
VpaK11BI	GGWCC	1 cut(s)	893
XapI	RAATTY	5 cut(s)	46, 146, 1036, 1381, 1915
XbaI	TCTAGA	1 cut(s)	919
XceI	RCATGY	4 cut(s)	177, 316, 549, 1379
XhoI	CTCGAG	1 cut(s)	1069
XmnI	GAANNNNTTC	2 cut(s)	87, 1815
XspI	CTAG	2 cut(s)	920, 1761
ZrmI	AGTACT	1 cut(s)	452
Zsp2I	ATGCAT	2 cut(s)	714, 1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.