Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0001124

Physical Location & Seq

Genomic Coordinates Forward (+)

49520554 .. 49529315

Gene Structure 8762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00255300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGTCGTTCTCCGACTCCGATTCGTCGTCCTACGGCGCCGACTACAAGAATTTCAAGCAAATCAGCCGTGATCGGCTATTGCATGAAATGCTTCGATCTTGTAAATCGGGGGACTCAAAATCAACTTGGAAGGTGCTGATTATGGACAAACTTACTGTCAAGATAATGTCTTATGCATGCAAAATGGCTGATATTACAGATGAAGGAGTTTCATTGGTTGAAGATATATATAGGCGAAGGCAGCCGTTGCCCTCCATGGATGCTATATACTTTATGCAGCCGTCCAAAGAGAATGTTATCATGTTCTTGTCAGACATGTCTGGAAGATCACCATTATACAGAAAGGCATTTGTTTTCTTCAGTTCACCTATTCCAAAAGAATTGGTCAGTCACATCAAGAAGGATGGAACTGTCTTAACTCGCATATCTGCTTTGAGAGAGATGAATTTGGAATATTTTGCTATAGACAGCCAGGCTTTTGTAACCAACAATGAGAAGGCTTTAGAGGAACTTTATGGGGATGAGGAGAATTCACGCAAAGGTGTTGCATGTTTGAATGTGATGGCAACTCGAGTTGCCACGGTTTTTGCTTCTTTGAGGGAATTTCCTCATGTGCGATACCGAGCTGCCAAGTCACTTGATGCCACCACGATGACAACTTTTCGTGATTTAATTCCTACAAAGCTTGCTGCAGGGATCTGGGATTGTCTCATGAAATATAAAAAAACAATTCCGAACTTCCCTGAGACAGAAACATGCGAGTTGCTTATCCTTGACAGATCTGTAGATCAGATTGCACCAATCATACACGAATGGACGTATGATGCCATGTGTCATGACTTGCTAAATATGGATGGAAATAAATATGTGCAAGAAGTTCCAGGCAAAAATGGTGGTCCACCAGAGAAAAAAGAGGTTCTCTTAGAGGATCATGATCCTGTCTGGCTTGAGCTTCGCCATGCTCATATAGCAGATGCTAGTGAACGGTTGCACGATAAAATGACCAACTTTGTATCAAAGAATAAGGCTGCACAAATGCATGGGTCCAGAGATACTCACGAACTATCTACAAGGGACTTGCAAAAGATGGTTCAAGCATTGCCACAATACAGTGAACAAATTGACAAGCTCTCCCTGCATGTAGAGATTGCGGGGAAAGTTAACAAAATTATCAGGGAGCTTGGGCTGCGAGAACTTGGGCAGTTGGAGCAGGATCTTGTTTTTGGAGATGCGGGGATGAAAGATGTAATCAAATTTTTGACAACGAAAGAGGATACAACTGGTGAAAATAAGTTGCGCTTGTTGATGATTCTTGCAGCCATTTATCCTGAGAAATTTGAGGGTGAGAAGGGTCACAATTTGATGAAGTTAGCCAAATTACCACCCGATGATATGAAGGCTGTGTCTAATATGAGACTGCTTGGTGAATCGTTAGATAGCAAAAAAAGCTCAACCGGAACTTTTTCTTTGAAGTTTGATCTTCATAAGAAGAAACGTGCAGCTAGGAAAGAGCGTCCAAATGAACAAGAAACATGGCAGCTTTCGCGTTTTTATCCCATTATAGAGGAACTTATAGAAAATCTTAGCAAAGGTGAACTGTCAAAGGAAGACTATCCGTGTTTGAATGACCCGAGTCCAAGTTTTCATGGGACATCACAAAGTGCACCAGTACATCAGCAACCGGCTGCTCATTCAATGAGATCGAGAAGGACGCCAACATGGGCGCGGCCTCGGAATTCCGATGATGGGTATTCAAGTGATTCAGTATTAAGGCATGCATCTAGTGATTTCAAGAAGATGGGCCAACGCATATTTGTAGTAATAGTAGGTGGAGCTACTAGATCAGAGCTTAGGGTTTGCCACAAACTCACAGCTAAGTTGAAGAGGGAAGTTGTTTTAGGCTCCTCGGGTCTTGATGATCCTGCACCCTTTATAACGAGACTAAAAATGTTGACAGAGAATGAGCTCTCATTGGATGATCTCCAGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0016020 GO:0019898 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04721 map04721

Pfam Domains

Protein Families

Sec1

Protein Analysis

663

Amino Acids

75.31

Weight (kDa)

7.64

Isoelectric Point (pI)

50.59

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	44 - 645	2.9e-128	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0001124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12360 AT4G12120
fragaria_vesca	FvH4_2g27020 FvH4_2g27020 FvH4_2g27020 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992
malus_domestica	MD04G1079000.v1.1 MD06G1073800.v1.1
prunus_persica	Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1
pyrus_communis	pycom04g07080 pycom06g05270
rosa_chinensis	RchiOBHm_Chr5g0038751 RchiOBHm_Chr6g0295901 RchiOBHm_Chr7g0201411
rosa_laevigata	RLG00000003677 RLG00000011758 RLG00000033865
rosa_multiflora	Rmu_sc0001469.1_g000008 Rmu_sc0005722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042410 Rroxscaffold_3G00255300 Rroxscaffold_7G00172070
rosa_rugosa	Rorug05G0173300.1 Rorug05G0173400 Rorug05G0173500 Rorug06G0255000 Rorug06G0255000 Rorug07G0063400 Rorug07G0063500
rosa_samantha	Rh5AG260700 Rh5BG264400 Rh5CG297100 Rh5DG272800 Rh6AG368700 Rh6BG376400 Rh6CG382600 Rh6DG369200 Rh7AG190300 Rh7BG192700 Rh7CG201800 Rh7DG195300
rosa_wichuraiana	Rw5G024070 Rw5G024360 Rw6G032150 Rw7G016710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1934
AccB1I	GGYRCC	1 cut(s)	35
AccII	CGCG	2 cut(s)	1546, 1726
AciI	CCGC	3 cut(s)	1151, 1232, 1726
AclWI	GGATC	5 cut(s)	704, 929, 936, 1221, 1913
AcsI	RAATTY	7 cut(s)	49, 445, 529, 602, 1253, 1334, 1735
AcuI	CTGAAG	1 cut(s)	343
AcyI	GRCGYC	2 cut(s)	36, 1712
AdeI	CACNNNGTG	1 cut(s)	1661
AfaI	GTAC	1 cut(s)	1671
AfiI	CCNNNNNNNGG	1 cut(s)	1746
AflIII	ACRYGT	1 cut(s)	315
AjnI	CCWGG	2 cut(s)	471, 880
Alw21I	GWGCWC	2 cut(s)	1666, 1968
Alw26I	GTCTC	4 cut(s)	713, 740, 1408, 1933
Alw44I	GTGCAC	1 cut(s)	1662
AlwI	GGATC	5 cut(s)	704, 929, 936, 1221, 1913
Ama87I	CYCGRG	3 cut(s)	570, 1630, 1906
AoxI	GGCC	2 cut(s)	1727, 1801
ApaLI	GTGCAC	1 cut(s)	1662
ApoI	RAATTY	7 cut(s)	49, 445, 529, 602, 1253, 1334, 1735
ArsI	GACNNNNNNTTYG	2 cut(s)	141, 173
Asp700I	GAANNNNTTC	2 cut(s)	90, 1462
AspLEI	GCGC	3 cut(s)	38, 1299, 1726
AspS9I	GGNCC	3 cut(s)	896, 1044, 1801
AsuHPI	GGTGA	6 cut(s)	321, 357, 1295, 1355, 1436, 1604
AvaI	CYCGRG	3 cut(s)	570, 1630, 1906
AvaII	GGWCC	2 cut(s)	896, 1044
BaeGI	GKGCMC	1 cut(s)	1666
BanI	GGYRCC	1 cut(s)	35
BanII	GRGCYC	1 cut(s)	1968
BbsI	GAAGAC	1 cut(s)	1614
Bbv12I	GWGCWC	2 cut(s)	1666, 1968
BccI	CCATC	6 cut(s)	398, 556, 848, 1081, 1739, 1792
BceAI	ACGGC	4 cut(s)	49, 51, 229, 265
BciT130I	CCWGG	2 cut(s)	473, 882
BciVI	GTATCC	1 cut(s)	1267
BcoDI	GTCTC	4 cut(s)	713, 740, 1408, 1933
BfaI	CTAG	4 cut(s)	978, 1503, 1782, 1839
BfmI	CTRYAG	3 cut(s)	462, 690, 783
BfoI	RGCGCY	1 cut(s)	39
BfuI	GTATCC	1 cut(s)	1267
BglII	AGATCT	2 cut(s)	779, 1986
Bme1390I	CCNGG	2 cut(s)	473, 882
Bme18I	GGWCC	2 cut(s)	896, 1044
BmeT110I	CYCGRG	3 cut(s)	570, 1630, 1906
BmgT120I	GGNCC	3 cut(s)	896, 1044, 1801
BmiI	GGNNCC	3 cut(s)	37, 1045, 1903
BmrFI	CCNGG	2 cut(s)	473, 882
BmsI	GCATC	6 cut(s)	250, 631, 814, 964, 1219, 1787
BoxI	GACNNNNGTC	1 cut(s)	1632
BpiI	GAAGAC	1 cut(s)	1614
BpmI	CTGGAG	1 cut(s)	1967
Bpu10I	CCTNAGC	1 cut(s)	1850
BpuEI	CTTGAG	1 cut(s)	968
BsaBI	GATNNNNATC	1 cut(s)	933
BsaHI	GRCGYC	2 cut(s)	36, 1712
BsaJI	CCNNGG	4 cut(s)	255, 579, 1730, 1905
BsaWI	WCCGGW	1 cut(s)	1454
BsaXI	ACNNNNNCTCC	2 cut(s)	1115, 1145
Bsc4I	CCNNNNNNNGG	1 cut(s)	1746
Bse118I	RCCGGY	1 cut(s)	1681
Bse1I	ACTGG	2 cut(s)	1285, 1667
Bse3DI	GCAATG	1 cut(s)	1097
Bse8I	GATNNNNATC	1 cut(s)	933
BseBI	CCWGG	2 cut(s)	473, 882
BseDI	CCNNGG	4 cut(s)	255, 579, 1730, 1905
BseGI	GGATG	6 cut(s)	265, 409, 526, 859, 1242, 1981
BseJI	GATNNNNATC	1 cut(s)	933
BseLI	CCNNNNNNNGG	1 cut(s)	1746
BseMI	GCAATG	1 cut(s)	1097
BseMII	CTCAG	2 cut(s)	735, 1320
BseNI	ACTGG	2 cut(s)	1285, 1667
BseRI	GAGGAG	2 cut(s)	539, 1894
BseSI	GKGCMC	1 cut(s)	1666
BsgI	GTGCAG	3 cut(s)	1014, 1518, 1908
Bsh1236I	CGCG	2 cut(s)	1546, 1726
BshFI	GGCC	2 cut(s)	1729, 1803
BshNI	GGYRCC	1 cut(s)	35
BsiHKAI	GWGCWC	2 cut(s)	1666, 1968
BsiHKCI	CYCGRG	3 cut(s)	570, 1630, 1906
BsiSI	CCGG	2 cut(s)	1455, 1682
BslFI	GGGAC	3 cut(s)	125, 1088, 1663
BslI	CCNNNNNNNGG	1 cut(s)	1746
BsmAI	GTCTC	4 cut(s)	713, 740, 1408, 1933
BsmFI	GGGAC	3 cut(s)	125, 1088, 1663
BsnI	GGCC	2 cut(s)	1729, 1803
BsoBI	CYCGRG	3 cut(s)	570, 1630, 1906
Bsp1286I	GDGCHC	2 cut(s)	1666, 1968
Bsp19I	CCATGG	1 cut(s)	255
BspACI	CCGC	3 cut(s)	1151, 1232, 1726
BspANI	GGCC	2 cut(s)	1729, 1803
BspCNI	CTCAG	2 cut(s)	736, 1321
BspFNI	CGCG	2 cut(s)	1546, 1726
BspHI	TCATGA	3 cut(s)	711, 835, 931
BspLI	GGNNCC	3 cut(s)	37, 1045, 1903
BspMAI	CTGCAG	1 cut(s)	694
BspPI	GGATC	5 cut(s)	704, 929, 936, 1221, 1913
BspT107I	GGYRCC	1 cut(s)	35
BsrDI	GCAATG	1 cut(s)	1097
BsrFI	RCCGGY	1 cut(s)	1681
BsrI	ACTGG	2 cut(s)	1285, 1667
BssAI	RCCGGY	1 cut(s)	1681
BssECI	CCNNGG	4 cut(s)	255, 579, 1730, 1905
BssNI	GRCGYC	2 cut(s)	36, 1712
BssT1I	CCWWGG	1 cut(s)	255
Bst2UI	CCWGG	2 cut(s)	473, 882
Bst4CI	ACNGT	6 cut(s)	157, 412, 583, 987, 1112, 1599
Bst6I	CTCTTC	1 cut(s)	1877
BstACI	GRCGYC	2 cut(s)	36, 1712
BstAPI	GCANNNNNTGC	2 cut(s)	88, 247
BstC8I	GCNNGC	3 cut(s)	178, 687, 1776
BstDEI	CTNAG	6 cut(s)	744, 922, 1329, 1583, 1850, 1875
BstDSI	CCRYGG	2 cut(s)	255, 579
BstF5I	GGATG	6 cut(s)	265, 409, 526, 859, 1242, 1981
BstFNI	CGCG	2 cut(s)	1546, 1726
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	3 cut(s)	38, 1299, 1726
BstMAI	GTCTC	4 cut(s)	713, 740, 1408, 1933
BstMWI	GCNNNNNNNGC	9 cut(s)	88, 241, 247, 968, 1135, 1186, 1207, 1446, 1543
BstNI	CCWGG	2 cut(s)	473, 882
BstNSI	RCATGY	6 cut(s)	180, 319, 552, 759, 1142, 1778
BstPAI	GACNNNNGTC	1 cut(s)	1632
BstSCI	CCNGG	2 cut(s)	471, 880
BstSFI	CTRYAG	3 cut(s)	462, 690, 783
BstSLI	GKGCMC	1 cut(s)	1666
BstUI	CGCG	2 cut(s)	1546, 1726
BstV2I	GAAGAC	1 cut(s)	1614
BstX2I	RGATCY	4 cut(s)	696, 779, 1213, 1986
BstYI	RGATCY	4 cut(s)	696, 779, 1213, 1986
BsuI	GTATCC	1 cut(s)	1267
BsuRI	GGCC	2 cut(s)	1729, 1803
BtgI	CCRYGG	2 cut(s)	255, 579
BtsCI	GGATG	6 cut(s)	265, 409, 526, 859, 1242, 1981
BtsIMutI	CAGTG	1 cut(s)	1117
Cac8I	GCNNGC	3 cut(s)	178, 687, 1776
CciI	TCATGA	3 cut(s)	711, 835, 931
CfoI	GCGC	3 cut(s)	38, 1299, 1726
Cfr10I	RCCGGY	1 cut(s)	1681
Cfr13I	GGNCC	3 cut(s)	896, 1044, 1801
CseI	GACGC	2 cut(s)	1502, 1720
Csp6I	GTAC	1 cut(s)	1670
CspCI	CAANNNNNGTGG	4 cut(s)	568, 603, 874, 909
CviQI	GTAC	1 cut(s)	1670
DdeI	CTNAG	6 cut(s)	744, 922, 1329, 1583, 1850, 1875
DinI	GGCGCC	1 cut(s)	37
DraIII	CACNNNGTG	1 cut(s)	1661
Eam1104I	CTCTTC	1 cut(s)	1877
EarI	CTCTTC	1 cut(s)	1877
Ecl136II	GAGCTC	1 cut(s)	1966
Eco130I	CCWWGG	1 cut(s)	255
Eco24I	GRGCYC	1 cut(s)	1968
Eco47I	GGWCC	2 cut(s)	896, 1044
Eco53kI	GAGCTC	1 cut(s)	1966
Eco57I	CTGAAG	1 cut(s)	343
Eco88I	CYCGRG	3 cut(s)	570, 1630, 1906
EcoICRI	GAGCTC	1 cut(s)	1966
EcoRI	GAATTC	2 cut(s)	529, 1735
EcoRII	CCWGG	2 cut(s)	471, 880
EcoT14I	CCWWGG	1 cut(s)	255
EcoT22I	ATGCAT	3 cut(s)	178, 1041, 1780
EcoT38I	GRGCYC	1 cut(s)	1968
EgeI	GGCGCC	1 cut(s)	37
EheI	GGCGCC	1 cut(s)	37
ErhI	CCWWGG	1 cut(s)	255
FalI	AAGNNNNNCTT	2 cut(s)	1283, 1315
FaqI	GGGAC	3 cut(s)	125, 1088, 1663
FauI	CCCGC	2 cut(s)	1144, 1225
FokI	GGATG	6 cut(s)	272, 416, 533, 866, 1249, 1988
FriOI	GRGCYC	1 cut(s)	1968
FspBI	CTAG	4 cut(s)	978, 1503, 1782, 1839
GlaI	GCGC	3 cut(s)	37, 1298, 1725
GsuI	CTGGAG	1 cut(s)	1967
HaeII	RGCGCY	1 cut(s)	39
HaeIII	GGCC	2 cut(s)	1729, 1803
HapII	CCGG	2 cut(s)	1455, 1682
HgaI	GACGC	2 cut(s)	1502, 1720
HhaI	GCGC	3 cut(s)	38, 1299, 1726
Hin1I	GRCGYC	2 cut(s)	36, 1712
Hin6I	GCGC	3 cut(s)	36, 1297, 1724
HinP1I	GCGC	3 cut(s)	36, 1297, 1724
HincII	GTYRAC	2 cut(s)	1162, 1953
HindII	GTYRAC	2 cut(s)	1162, 1953
HindIII	AAGCTT	1 cut(s)	683
HinfI	GANTC	7 cut(s)	14, 20, 113, 1309, 1427, 1633, 1760
HpaI	GTTAAC	1 cut(s)	1162
HpaII	CCGG	2 cut(s)	1455, 1682
HphI	GGTGA	6 cut(s)	321, 357, 1295, 1355, 1436, 1604
Hpy166II	GTNNAC	8 cut(s)	365, 899, 983, 1115, 1162, 1595, 1664, 1953
Hpy188I	TCNGA	9 cut(s)	13, 19, 313, 735, 792, 1734, 1741, 1846, 1991
Hpy8I	GTNNAC	8 cut(s)	365, 899, 983, 1115, 1162, 1595, 1664, 1953
Hpy99I	CGWCG	1 cut(s)	28
HpyAV	CCTTC	8 cut(s)	124, 197, 231, 394, 490, 1342, 1390, 1701
HpyCH4III	ACNGT	6 cut(s)	157, 412, 583, 987, 1112, 1599
HpyCH4IV	ACGT	2 cut(s)	818, 1495
HpyF10VI	GCNNNNNNNGC	9 cut(s)	88, 241, 247, 968, 1135, 1186, 1207, 1446, 1543
HpyF3I	CTNAG	6 cut(s)	744, 922, 1329, 1583, 1850, 1875
HpySE526I	ACGT	2 cut(s)	818, 1495
Hsp92I	GRCGYC	2 cut(s)	36, 1712
HspAI	GCGC	3 cut(s)	36, 1297, 1724
KasI	GGCGCC	1 cut(s)	35
KspAI	GTTAAC	1 cut(s)	1162
LmnI	GCTCC	4 cut(s)	1177, 1207, 1832, 1907
LweI	GCATC	6 cut(s)	250, 631, 814, 964, 1219, 1787
MaeI	CTAG	4 cut(s)	978, 1503, 1782, 1839
MaeII	ACGT	2 cut(s)	818, 1495
MaeIII	GTNAC	4 cut(s)	389, 481, 633, 1352
MboII	GAAGA	8 cut(s)	233, 336, 349, 1472, 1501, 1619, 1807, 1894
MflI	RGATCY	4 cut(s)	696, 779, 1213, 1986
MhlI	GDGCHC	2 cut(s)	1666, 1968
Mly113I	GGCGCC	1 cut(s)	36
MlyI	GAGTC	3 cut(s)	8, 107, 1642
MmeI	TCCRAC	2 cut(s)	36, 1185
Mph1103I	ATGCAT	3 cut(s)	178, 1041, 1780
MroXI	GAANNNNTTC	2 cut(s)	90, 1462
MseI	TTAA	4 cut(s)	416, 671, 1161, 1769
MslI	CAYNNNNRTG	1 cut(s)	650
MspI	CCGG	2 cut(s)	1455, 1682
MspR9I	CCNGG	2 cut(s)	473, 882
MvaI	CCWGG	2 cut(s)	473, 882
MvnI	CGCG	2 cut(s)	1546, 1726
MwoI	GCNNNNNNNGC	9 cut(s)	88, 241, 247, 968, 1135, 1186, 1207, 1446, 1543
NarI	GGCGCC	1 cut(s)	36
NcoI	CCATGG	1 cut(s)	255
NlaIV	GGNNCC	3 cut(s)	37, 1045, 1903
NmuCI	GTSAC	3 cut(s)	389, 633, 1352
NsiI	ATGCAT	3 cut(s)	178, 1041, 1780
NspI	RCATGY	6 cut(s)	180, 319, 552, 759, 1142, 1778
PaeI	GCATGC	2 cut(s)	180, 1778
PaeR7I	CTCGAG	1 cut(s)	570
PagI	TCATGA	3 cut(s)	711, 835, 931
PciI	ACATGT	1 cut(s)	315
PdmI	GAANNNNTTC	2 cut(s)	90, 1462
PfeI	GAWTC	4 cut(s)	20, 1309, 1427, 1760
PleI	GAGTC	3 cut(s)	8, 107, 1641
PluTI	GGCGCC	1 cut(s)	39
PpsI	GAGTC	3 cut(s)	8, 107, 1641
PscI	ACATGT	1 cut(s)	315
PshAI	GACNNNNGTC	1 cut(s)	1632
PsiI	TTATAA	1 cut(s)	1934
Psp124BI	GAGCTC	1 cut(s)	1968
Psp6I	CCWGG	2 cut(s)	471, 880
PspGI	CCWGG	2 cut(s)	471, 880
PspN4I	GGNNCC	3 cut(s)	37, 1045, 1903
PspPI	GGNCC	3 cut(s)	896, 1044, 1801
PspXI	VCTCGAGB	1 cut(s)	570
PstI	CTGCAG	1 cut(s)	694
PsuI	RGATCY	4 cut(s)	696, 779, 1213, 1986
RsaI	GTAC	1 cut(s)	1671
RsaNI	GTAC	1 cut(s)	1670
RseI	CAYNNNNRTG	1 cut(s)	650
SacI	GAGCTC	1 cut(s)	1968
SaqAI	TTAA	4 cut(s)	416, 671, 1161, 1769
Sau96I	GGNCC	3 cut(s)	896, 1044, 1801
SchI	GAGTC	3 cut(s)	8, 107, 1642
ScrFI	CCNGG	2 cut(s)	473, 882
SduI	GDGCHC	2 cut(s)	1666, 1968
SfaNI	GCATC	6 cut(s)	250, 631, 814, 964, 1219, 1787
SfcI	CTRYAG	3 cut(s)	462, 690, 783
SfoI	GGCGCC	1 cut(s)	37
Sfr274I	CTCGAG	1 cut(s)	570
SinI	GGWCC	2 cut(s)	896, 1044
SlaI	CTCGAG	1 cut(s)	570
SmiMI	CAYNNNNRTG	1 cut(s)	650
SmlI	CTYRAG	2 cut(s)	570, 947
SmoI	CTYRAG	2 cut(s)	570, 947
SphI	GCATGC	2 cut(s)	180, 1778
SsiI	CCGC	3 cut(s)	1151, 1232, 1726
SspDI	GGCGCC	1 cut(s)	35
SspI	AATATT	1 cut(s)	455
SspMI	CTAG	4 cut(s)	978, 1503, 1782, 1839
SstI	GAGCTC	1 cut(s)	1968
StyD4I	CCNGG	2 cut(s)	471, 880
StyI	CCWWGG	1 cut(s)	255
TaaI	ACNGT	6 cut(s)	157, 412, 583, 987, 1112, 1599
TaiI	ACGT	2 cut(s)	821, 1498
TaqI	TCGA	3 cut(s)	94, 571, 1703
TatI	WGTACW	1 cut(s)	1669
TauI	GCSGC	1 cut(s)	1729
TfiI	GAWTC	4 cut(s)	20, 1309, 1427, 1760
Tru1I	TTAA	4 cut(s)	416, 671, 1161, 1769
Tru9I	TTAA	4 cut(s)	416, 671, 1161, 1769
TscAI	CASTG	1 cut(s)	1117
TseFI	GTSAC	3 cut(s)	389, 633, 1352
Tsp45I	GTSAC	3 cut(s)	389, 633, 1352
TspGWI	ACGGA	1 cut(s)	1605
TspRI	CASTG	1 cut(s)	1117
VneI	GTGCAC	1 cut(s)	1662
VpaK11BI	GGWCC	2 cut(s)	896, 1044
XapI	RAATTY	7 cut(s)	49, 445, 529, 602, 1253, 1334, 1735
XceI	RCATGY	6 cut(s)	180, 319, 552, 759, 1142, 1778
XhoI	CTCGAG	1 cut(s)	570
XmnI	GAANNNNTTC	2 cut(s)	90, 1462
XspI	CTAG	4 cut(s)	978, 1503, 1782, 1839
Zsp2I	ATGCAT	3 cut(s)	178, 1041, 1780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.