Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0001124

Physical Location & Seq

Genomic Coordinates Reverse (-)

34018314 .. 34027083

Gene Structure 8770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG260700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGTCGTTATCCGGCTCCGGTTCCGGTTTGTCATCAACTTCGAACAACTACAGGAATTTTAAAGAAGTCACGCGCCACCGATTATTGCATGAAATGCTTCGGTCTTGCAAAACCGGGAACTCAAAATCAACATGGAAGGTGCTCATTATGGACGAATTTACTATCAAGATAATGTCTTACGCATGCACACTCCTTGATACTACAAATGAAGGAGTTTTATTGCTAGAGCGCATAGATAAGGAAAGGCAGCGATTTGCCTCCATGGATGCAATATATTTCATCCGGCCTTCTAAAGAGAATGTTAGATTCTTCTTGTCAGACATGTCGGGAAGTGCACCTTTATATAGGAAGGCGTTTGTTTTTTTCACTTCACCTATATCGAAAGATTTGGTTGGGCAGATAAAGGGGGATGGAAGTCTAACAAGTCGCATATCTGCATTGAGTGAGATGAATTTGGAGTATTATGCTATAGACAGCCAGGGTTTTGTTACCAATAATGAGAGAGCTTTAGCGCAGCTTTATGGGGACAAGGACGATTCACGCGAAGCCGAAGCGTGTTTGAGTGAGATGGCTGCACGTGTAGCCACAGTCTTTGCTTCTTTAAGGGAATTTCCTATTGTTCGCTACCGAGCTGCCAATAGGATGGATGCCACCATGGAGACCACTTTTCGTGATTTAATTCCTACAAAGCTTGCTGCTGGTGTCTGGGATTGTCTCATGCATTACAAAAGAACAATTCCAAATTTCCCTCAGATAGAAACATGCGAGTTACTTATCCTTGACAGATCTGTGGATCAGATTGCGCCAATCATCCACGAGTGGACATACGATGCCTTGTGTCATGACTTGTTAGATATGGAAGGAAATAAATATGTGCATGAGGTTGCGAGCATAAACGGTGGTCCTCCTGACAAGAAAGATGTTCTTCTAGAGGAGCGTGATCCTGTCTGGCTTGAACTTCGCGATCATCATTTAGGATTTGCCTTGGAATGGTTGAATTCGAAACTTTCCAATCTTAAGCAGAACAAGGCTGCACGATTCGAAAATTCAAGAGATGGGCAATGTCCTGAGCTATCTTCAAGGGAATTGAAAGAGATAACTGAAGCATTGCCACAGTATGTTGAACTAAAAGAAAAGCTCTCCCTTCATATAGAGATTGCATCGAAACTAAACAGAATTGTCAGAAACCTTGAGCTCCCATTCCTTTCGGAGCTGGAGCAGGGTCTTGTTTTTGGAGATGCAGGAATAAAAGAGGTGATCATGTTTCTGAGAATACATGGGCCGTATATTACTCGCGAACATAAGCTGCGCTTGTTGATGATTCTTGCTGCCATCTATCCTGAGAAATTTGAGGATGAAGAAGATCTACATATGATGATGAAGTACGCATATTTACTACCCCAGGATATGACTGTTGTGAGGAATATGAAGTTGATTGGGGAGAGCAGGGAAGGCTCATCTGGAATTTTTCCTCTGAAGTTTGGTATTGCTAAGAGAAAATGTTATAGGAAAGAGCGTCGAAGAGAAGATGAATGGCTTTATTCGCGCTTTTTTCCGATGATAGAGGAACTTATAGAAAAGCTTAGCAATGGTGCACTGTCAGAGGAATTATATCCATGTGTGAATCCCAATGCTCGTTTACTGAGATCGAGGAGGACACCAATGTGGGCCCACCGCCGGAATTCCGATAATGGGTTTTCAAGGGATGCATCTACTGATTTCGAAAAGATGGGCCGACGCATATTTGTAGTTATAGTAGGTGGAGCTACTAGATCAGAGCTTAGGGTTTGTCGGAAACTCACAGCAAAGCTCAAAAGGGAAGTTATTCTGGGCTCCTCATCTCTTGACGATCCTGCAACTTTTGTTACGAATCTGAAAATGATCACAGCAGACGACCAACCGCTCACGTTGGATGATATCCAGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0016020 GO:0019898 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04721 map04721

Pfam Domains

Protein Families

Sec1

Protein Analysis

642

Amino Acids

73.75

Weight (kDa)

6.71

Isoelectric Point (pI)

45.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	46 - 623	1.8e-108	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12360 AT4G12120
fragaria_vesca	FvH4_2g27020 FvH4_2g27020 FvH4_2g27020 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992
malus_domestica	MD04G1079000.v1.1 MD06G1073800.v1.1
prunus_persica	Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1
pyrus_communis	pycom04g07080 pycom06g05270
rosa_chinensis	RchiOBHm_Chr5g0038751 RchiOBHm_Chr6g0295901 RchiOBHm_Chr7g0201411
rosa_laevigata	RLG00000003677 RLG00000011758 RLG00000033865
rosa_multiflora	Rmu_sc0001469.1_g000008 Rmu_sc0005722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042410 Rroxscaffold_3G00255300 Rroxscaffold_7G00172070
rosa_rugosa	Rorug05G0173300.1 Rorug05G0173400 Rorug05G0173500 Rorug06G0255000 Rorug06G0255000 Rorug07G0063400 Rorug07G0063500
rosa_samantha	Rh5AG260700 Rh5BG264400 Rh5CG297100 Rh5DG272800 Rh6AG368700 Rh6BG376400 Rh6CG382600 Rh6DG369200 Rh7AG190300 Rh7BG192700 Rh7CG201800 Rh7DG195300
rosa_wichuraiana	Rw5G024070 Rw5G024360 Rw6G032150 Rw7G016710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1903
AccII	CGCG	5 cut(s)	73, 543, 963, 1296, 1546
AciI	CCGC	2 cut(s)	1675, 1901
AclWI	GGATC	3 cut(s)	801, 935, 1844
AcuI	CTGAAG	2 cut(s)	1122, 1496
AcvI	CACGTG	1 cut(s)	578
AfaI	GTAC	1 cut(s)	1385
AfiI	CCNNNNNNNGG	3 cut(s)	990, 1677, 1692
AflII	CTTAAG	1 cut(s)	1016
AflIII	ACRYGT	2 cut(s)	321, 577
AgsI	TTSAA	7 cut(s)	956, 997, 1050, 1080, 1090, 1124, 1701
AjnI	CCWGG	2 cut(s)	477, 1401
AleI	CACNNNNGTG	1 cut(s)	1663
Alw21I	GWGCWC	4 cut(s)	144, 337, 1197, 1597
Alw26I	GTCTC	2 cut(s)	653, 719
Alw44I	GTGCAC	2 cut(s)	333, 1593
AlwI	GGATC	3 cut(s)	801, 935, 1844
AoxI	GGCC	4 cut(s)	284, 1280, 1668, 1732
ApaI	GGGCCC	1 cut(s)	1672
ApaLI	GTGCAC	2 cut(s)	333, 1593
ApeKI	GCWGC	8 cut(s)	247, 514, 572, 632, 695, 1031, 1306, 1328
Asp700I	GAANNNNTTC	2 cut(s)	96, 1824
AspLEI	GCGC	6 cut(s)	75, 231, 514, 805, 1311, 1548
AspS9I	GGNCC	5 cut(s)	902, 1280, 1668, 1669, 1732
AsuC2I	CCSGG	1 cut(s)	115
AsuHPI	GGTGA	2 cut(s)	363, 1267
AsuII	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
AvaII	GGWCC	1 cut(s)	902
BaeGI	GKGCMC	3 cut(s)	337, 1597, 1672
BanII	GRGCYC	3 cut(s)	1197, 1672, 1835
BarI	GAAGNNNNNNTAC	2 cut(s)	1350, 1382
BauI	CACGAG	1 cut(s)	815
BbrPI	CACGTG	1 cut(s)	578
Bbv12I	GWGCWC	4 cut(s)	144, 337, 1197, 1597
BbvI	GCAGC	8 cut(s)	259, 526, 559, 619, 682, 1018, 1293, 1315
BccI	CCATC	6 cut(s)	404, 562, 637, 1049, 1340, 1723
BceAI	ACGGC	1 cut(s)	1267
BciT130I	CCWGG	2 cut(s)	479, 1403
BclI	TGATCA	2 cut(s)	1257, 1881
BcnI	CCSGG	1 cut(s)	115
BcoDI	GTCTC	2 cut(s)	653, 719
BfaI	CTAG	3 cut(s)	224, 929, 1770
BfmI	CTRYAG	2 cut(s)	49, 468
BfrI	CTTAAG	1 cut(s)	1016
BglII	AGATCT	3 cut(s)	785, 1363, 1923
BisI	GCNGC	8 cut(s)	248, 515, 573, 633, 696, 1032, 1307, 1329
BlpI	GCTNAGC	1 cut(s)	1583
BlsI	GCNGC	8 cut(s)	249, 516, 574, 634, 697, 1033, 1308, 1330
Bme1390I	CCNGG	3 cut(s)	115, 479, 1403
Bme18I	GGWCC	1 cut(s)	902
BmgT120I	GGNCC	5 cut(s)	902, 1280, 1668, 1669, 1732
BmiI	GGNNCC	4 cut(s)	16, 22, 1670, 1834
BmrFI	CCNGG	3 cut(s)	115, 479, 1403
BmsI	GCATC	7 cut(s)	256, 637, 820, 1169, 1228, 1696, 1718
BpmI	CTGGAG	1 cut(s)	1235
Bpu10I	CCTNAGC	2 cut(s)	1068, 1781
Bpu1102I	GCTNAGC	1 cut(s)	1583
Bpu14I	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
BpuEI	CTTGAG	1 cut(s)	1211
BpuMI	CCSGG	1 cut(s)	115
BsaAI	YACGTR	1 cut(s)	578
BsaI	GGTCTC	1 cut(s)	653
BsaJI	CCNNGG	5 cut(s)	261, 478, 654, 984, 1401
BsaWI	WCCGGW	2 cut(s)	17, 23
Bsc4I	CCNNNNNNNGG	3 cut(s)	990, 1677, 1692
Bse3DI	GCAATG	3 cut(s)	1067, 1106, 1594
BseBI	CCWGG	2 cut(s)	479, 1403
BseDI	CCNNGG	5 cut(s)	261, 478, 654, 984, 1401
BseGI	GGATG	9 cut(s)	271, 279, 415, 648, 652, 810, 1360, 1711, 1918
BseLI	CCNNNNNNNGG	3 cut(s)	990, 1677, 1692
BseMI	GCAATG	3 cut(s)	1067, 1106, 1594
BseMII	CTCAG	5 cut(s)	764, 1059, 1259, 1332, 1634
BseRI	GAGGAG	3 cut(s)	947, 1666, 1825
BseSI	GKGCMC	3 cut(s)	337, 1597, 1672
BseXI	GCAGC	8 cut(s)	259, 526, 559, 619, 682, 1018, 1293, 1315
BsgI	GTGCAG	2 cut(s)	558, 1017
Bsh1236I	CGCG	5 cut(s)	73, 543, 963, 1296, 1546
BshFI	GGCC	4 cut(s)	286, 1282, 1670, 1734
BsiHKAI	GWGCWC	4 cut(s)	144, 337, 1197, 1597
BsiSI	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1678
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	3 cut(s)	990, 1677, 1692
BsmAI	GTCTC	2 cut(s)	653, 719
BsmFI	GGGAC	1 cut(s)	539
BsnI	GGCC	4 cut(s)	286, 1282, 1670, 1734
Bso31I	GGTCTC	1 cut(s)	653
Bsp119I	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
Bsp120I	GGGCCC	1 cut(s)	1668
Bsp1286I	GDGCHC	6 cut(s)	144, 337, 1197, 1597, 1672, 1835
Bsp1720I	GCTNAGC	1 cut(s)	1583
Bsp19I	CCATGG	2 cut(s)	261, 654
Bsp68I	TCGCGA	2 cut(s)	963, 1296
BspACI	CCGC	2 cut(s)	1675, 1901
BspANI	GGCC	4 cut(s)	286, 1282, 1670, 1734
BspCNI	CTCAG	5 cut(s)	763, 1060, 1260, 1333, 1635
BspFNI	CGCG	5 cut(s)	73, 543, 963, 1296, 1546
BspHI	TCATGA	1 cut(s)	841
BspLI	GGNNCC	4 cut(s)	16, 22, 1670, 1834
BspPI	GGATC	3 cut(s)	801, 935, 1844
BspT104I	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
BspTI	CTTAAG	1 cut(s)	1016
BspTNI	GGTCTC	1 cut(s)	653
BsrBI	CCGCTC	1 cut(s)	1903
BsrDI	GCAATG	3 cut(s)	1067, 1106, 1594
BssECI	CCNNGG	5 cut(s)	261, 478, 654, 984, 1401
BssSI	CACGAG	1 cut(s)	815
BssT1I	CCWWGG	3 cut(s)	261, 654, 984
Bst2BI	CACGAG	1 cut(s)	815
Bst2UI	CCWGG	2 cut(s)	479, 1403
Bst4CI	ACNGT	5 cut(s)	589, 899, 1116, 1414, 1599
Bst6I	CTCTTC	1 cut(s)	1516
BstAFI	CTTAAG	1 cut(s)	1016
BstAPI	GCANNNNNTGC	1 cut(s)	94
BstBAI	YACGTR	1 cut(s)	578
BstBI	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
BstC8I	GCNNGC	3 cut(s)	184, 693, 889
BstDEI	CTNAG	8 cut(s)	750, 1068, 1268, 1341, 1491, 1583, 1643, 1781
BstDSI	CCRYGG	2 cut(s)	261, 654
BstF5I	GGATG	9 cut(s)	271, 279, 415, 648, 652, 810, 1360, 1711, 1918
BstFNI	CGCG	5 cut(s)	73, 543, 963, 1296, 1546
BstHHI	GCGC	6 cut(s)	75, 231, 514, 805, 1311, 1548
BstMAI	GTCTC	2 cut(s)	653, 719
BstMWI	GCNNNNNNNGC	4 cut(s)	94, 581, 1452, 1543
BstNI	CCWGG	2 cut(s)	479, 1403
BstNSI	RCATGY	3 cut(s)	186, 325, 765
BstSCI	CCNGG	3 cut(s)	113, 477, 1401
BstSFI	CTRYAG	2 cut(s)	49, 468
BstSLI	GKGCMC	3 cut(s)	337, 1597, 1672
BstUI	CGCG	5 cut(s)	73, 543, 963, 1296, 1546
BstV1I	GCAGC	8 cut(s)	259, 526, 559, 619, 682, 1018, 1293, 1315
BstX2I	RGATCY	3 cut(s)	785, 1363, 1923
BstXI	CCANNNNNNTGG	1 cut(s)	643
BstYI	RGATCY	3 cut(s)	785, 1363, 1923
BsuRI	GGCC	4 cut(s)	286, 1282, 1670, 1734
BtgI	CCRYGG	2 cut(s)	261, 654
BtsCI	GGATG	9 cut(s)	271, 279, 415, 648, 652, 810, 1360, 1711, 1918
BtsIMutI	CAGTG	1 cut(s)	1595
BtuMI	TCGCGA	2 cut(s)	963, 1296
Cac8I	GCNNGC	3 cut(s)	184, 693, 889
CciI	TCATGA	1 cut(s)	841
CfoI	GCGC	6 cut(s)	75, 231, 514, 805, 1311, 1548
Cfr13I	GGNCC	5 cut(s)	902, 1280, 1668, 1669, 1732
CseI	GACGC	2 cut(s)	1505, 1746
Csp6I	GTAC	1 cut(s)	1384
CspCI	CAANNNNNGTGG	2 cut(s)	574, 609
CviQI	GTAC	1 cut(s)	1384
DdeI	CTNAG	8 cut(s)	750, 1068, 1268, 1341, 1491, 1583, 1643, 1781
DraI	TTTAAA	1 cut(s)	61
Eam1104I	CTCTTC	1 cut(s)	1516
EarI	CTCTTC	1 cut(s)	1516
Ecl136II	GAGCTC	1 cut(s)	1195
Eco130I	CCWWGG	3 cut(s)	261, 654, 984
Eco24I	GRGCYC	3 cut(s)	1197, 1672, 1835
Eco31I	GGTCTC	1 cut(s)	653
Eco32I	GATATC	1 cut(s)	1918
Eco47I	GGWCC	1 cut(s)	902
Eco53kI	GAGCTC	1 cut(s)	1195
Eco57I	CTGAAG	2 cut(s)	1122, 1496
Eco72I	CACGTG	1 cut(s)	578
EcoICRI	GAGCTC	1 cut(s)	1195
EcoRI	GAATTC	2 cut(s)	997, 1681
EcoRII	CCWGG	2 cut(s)	477, 1401
EcoRV	GATATC	1 cut(s)	1918
EcoT14I	CCWWGG	3 cut(s)	261, 654, 984
EcoT22I	ATGCAT	2 cut(s)	723, 1711
EcoT38I	GRGCYC	3 cut(s)	1197, 1672, 1835
ErhI	CCWWGG	3 cut(s)	261, 654, 984
FalI	AAGNNNNNCTT	6 cut(s)	322, 354, 909, 941, 1295, 1327
FaqI	GGGAC	1 cut(s)	539
FauNDI	CATATG	1 cut(s)	1371
FbaI	TGATCA	2 cut(s)	1257, 1881
Fnu4HI	GCNGC	8 cut(s)	248, 515, 573, 633, 696, 1032, 1307, 1329
FokI	GGATG	9 cut(s)	266, 278, 422, 655, 659, 797, 1367, 1718, 1925
FriOI	GRGCYC	3 cut(s)	1197, 1672, 1835
Fsp4HI	GCNGC	8 cut(s)	248, 515, 573, 633, 696, 1032, 1307, 1329
FspBI	CTAG	3 cut(s)	224, 929, 1770
GlaI	GCGC	6 cut(s)	74, 230, 513, 804, 1310, 1547
GluI	GCNGC	8 cut(s)	248, 515, 573, 633, 696, 1032, 1307, 1329
GsuI	CTGGAG	1 cut(s)	1235
HaeIII	GGCC	4 cut(s)	286, 1282, 1670, 1734
HapII	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1678
HgaI	GACGC	2 cut(s)	1505, 1746
HhaI	GCGC	6 cut(s)	75, 231, 514, 805, 1311, 1548
Hin6I	GCGC	6 cut(s)	73, 229, 512, 803, 1309, 1546
HinP1I	GCGC	6 cut(s)	73, 229, 512, 803, 1309, 1546
HindIII	AAGCTT	2 cut(s)	689, 1580
HinfI	GANTC	6 cut(s)	306, 536, 1038, 1321, 1624, 1870
HpaII	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1678
HphI	GGTGA	2 cut(s)	363, 1267
Hpy166II	GTNNAC	4 cut(s)	335, 822, 1595, 1640
Hpy8I	GTNNAC	4 cut(s)	335, 822, 1595, 1640
Hpy99I	CGWCG	2 cut(s)	1521, 1740
HpyAV	CCTTC	7 cut(s)	130, 203, 297, 343, 854, 1154, 1445
HpyCH4III	ACNGT	5 cut(s)	589, 899, 1116, 1414, 1599
HpyCH4IV	ACGT	2 cut(s)	577, 1907
HpyF10VI	GCNNNNNNNGC	4 cut(s)	94, 581, 1452, 1543
HpyF3I	CTNAG	8 cut(s)	750, 1068, 1268, 1341, 1491, 1583, 1643, 1781
HpySE526I	ACGT	2 cut(s)	577, 1907
HspAI	GCGC	6 cut(s)	73, 229, 512, 803, 1309, 1546
Ksp22I	TGATCA	2 cut(s)	1257, 1881
LmnI	GCTCC	7 cut(s)	20, 934, 1200, 1210, 1216, 1763, 1838
Lsp1109I	GCAGC	8 cut(s)	259, 526, 559, 619, 682, 1018, 1293, 1315
LweI	GCATC	7 cut(s)	256, 637, 820, 1169, 1228, 1696, 1718
MaeI	CTAG	3 cut(s)	224, 929, 1770
MaeII	ACGT	2 cut(s)	577, 1907
MaeIII	GTNAC	4 cut(s)	67, 487, 768, 1864
MbiI	CCGCTC	1 cut(s)	1903
MboII	GAAGA	7 cut(s)	301, 917, 1068, 1370, 1373, 1533, 1538
MflI	RGATCY	3 cut(s)	785, 1363, 1923
MhlI	GDGCHC	6 cut(s)	144, 337, 1197, 1597, 1672, 1835
MmeI	TCCRAC	2 cut(s)	1772, 1890
Mph1103I	ATGCAT	2 cut(s)	723, 1711
MroXI	GAANNNNTTC	2 cut(s)	96, 1824
MseI	TTAA	4 cut(s)	60, 602, 677, 1017
MslI	CAYNNNNRTG	1 cut(s)	1663
MspCI	CTTAAG	1 cut(s)	1016
MspI	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1678
MspR9I	CCNGG	3 cut(s)	115, 479, 1403
MvaI	CCWGG	2 cut(s)	479, 1403
MvnI	CGCG	5 cut(s)	73, 543, 963, 1296, 1546
MwoI	GCNNNNNNNGC	4 cut(s)	94, 581, 1452, 1543
NciI	CCSGG	1 cut(s)	115
NcoI	CCATGG	2 cut(s)	261, 654
NdeI	CATATG	1 cut(s)	1371
NlaIV	GGNNCC	4 cut(s)	16, 22, 1670, 1834
NmuCI	GTSAC	1 cut(s)	67
NruI	TCGCGA	2 cut(s)	963, 1296
NsiI	ATGCAT	2 cut(s)	723, 1711
NspI	RCATGY	3 cut(s)	186, 325, 765
NspV	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
OliI	CACNNNNGTG	1 cut(s)	1663
PaeI	GCATGC	1 cut(s)	186
PagI	TCATGA	1 cut(s)	841
PciI	ACATGT	1 cut(s)	321
PcsI	WCGNNNNNNNCGW	1 cut(s)	540
PdmI	GAANNNNTTC	2 cut(s)	96, 1824
PfeI	GAWTC	6 cut(s)	306, 536, 1038, 1321, 1624, 1870
PkrI	GCNGC	8 cut(s)	249, 516, 574, 634, 697, 1033, 1308, 1330
PmaCI	CACGTG	1 cut(s)	578
PmlI	CACGTG	1 cut(s)	578
Ppu21I	YACGTR	1 cut(s)	578
PscI	ACATGT	1 cut(s)	321
Psp124BI	GAGCTC	1 cut(s)	1197
Psp6I	CCWGG	2 cut(s)	477, 1401
PspCI	CACGTG	1 cut(s)	578
PspGI	CCWGG	2 cut(s)	477, 1401
PspN4I	GGNNCC	4 cut(s)	16, 22, 1670, 1834
PspOMI	GGGCCC	1 cut(s)	1668
PspPI	GGNCC	5 cut(s)	902, 1280, 1668, 1669, 1732
PsuI	RGATCY	3 cut(s)	785, 1363, 1923
RruI	TCGCGA	2 cut(s)	963, 1296
RsaI	GTAC	1 cut(s)	1385
RsaNI	GTAC	1 cut(s)	1384
RseI	CAYNNNNRTG	1 cut(s)	1663
SacI	GAGCTC	1 cut(s)	1197
SaqAI	TTAA	4 cut(s)	60, 602, 677, 1017
SatI	GCNGC	8 cut(s)	248, 515, 573, 633, 696, 1032, 1307, 1329
Sau96I	GGNCC	5 cut(s)	902, 1280, 1668, 1669, 1732
ScrFI	CCNGG	3 cut(s)	115, 479, 1403
SduI	GDGCHC	6 cut(s)	144, 337, 1197, 1597, 1672, 1835
SfaNI	GCATC	7 cut(s)	256, 637, 820, 1169, 1228, 1696, 1718
SfcI	CTRYAG	2 cut(s)	49, 468
SfuI	TTCGAA	4 cut(s)	41, 1001, 1041, 1722
SinI	GGWCC	1 cut(s)	902
SmiMI	CAYNNNNRTG	1 cut(s)	1663
SmlI	CTYRAG	2 cut(s)	1016, 1190
SmoI	CTYRAG	2 cut(s)	1016, 1190
SphI	GCATGC	1 cut(s)	186
SsiI	CCGC	2 cut(s)	1675, 1901
SspMI	CTAG	3 cut(s)	224, 929, 1770
SstI	GAGCTC	1 cut(s)	1197
StyD4I	CCNGG	3 cut(s)	113, 477, 1401
StyI	CCWWGG	3 cut(s)	261, 654, 984
TaaI	ACNGT	5 cut(s)	589, 899, 1116, 1414, 1599
TaiI	ACGT	2 cut(s)	580, 1910
TaqI	TCGA	8 cut(s)	41, 380, 1001, 1041, 1163, 1519, 1649, 1722
TaqII	GACCGA	1 cut(s)	90
TfiI	GAWTC	6 cut(s)	306, 536, 1038, 1321, 1624, 1870
Tru1I	TTAA	4 cut(s)	60, 602, 677, 1017
Tru9I	TTAA	4 cut(s)	60, 602, 677, 1017
TscAI	CASTG	1 cut(s)	1602
TseFI	GTSAC	1 cut(s)	67
TseI	GCWGC	8 cut(s)	247, 514, 572, 632, 695, 1031, 1306, 1328
Tsp45I	GTSAC	1 cut(s)	67
TspDTI	ATGAA	9 cut(s)	105, 222, 268, 464, 1136, 1371, 1394, 1442, 1545
TspRI	CASTG	1 cut(s)	1602
Vha464I	CTTAAG	1 cut(s)	1016
VneI	GTGCAC	2 cut(s)	333, 1593
VpaK11BI	GGWCC	1 cut(s)	902
XbaI	TCTAGA	1 cut(s)	928
XceI	RCATGY	3 cut(s)	186, 325, 765
XmnI	GAANNNNTTC	2 cut(s)	96, 1824
XspI	CTAG	3 cut(s)	224, 929, 1770
Zsp2I	ATGCAT	2 cut(s)	723, 1711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.