Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0001124

Physical Location & Seq

Genomic Coordinates Reverse (-)

34600711 .. 34609318

Gene Structure 8608 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G024360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1719 bp

ATGTCGTTATCCGGCTCCGGTTCCGGTTTGTCATCAACTTCGAACAACTACAGGAATTTTAAAGAAGTCACGCGCCACCGATTATTGCATGAAATGCTTCGGTCTTGCAAAACCGGGAACTCAAAATCAACATGGAAGGTACTCATTATGGACGAATTTACTATCAAGATAATGTCTTACGCATGCACACTCCTTGATACTACAAATGAAGGAGTTTTATTGCTAGAGCGCATAGATAAGGAAAGGCAGCGATTTGCCTCCATGGATGCAATATATTTCATCCGGCCTTCTAAAGAGAATGTTAGATTCTTCTTGTCAGACATGTCGGGAAGTGCACCTTTATATAGGAAGGCGTTTGTTTTTTTCACTTCACCTATATCGAAAGATTTGGTTGGGCAGATAAAGGGGGATGGAAGTCTAACAAGTCGCATATCTGCATTGAGTGAGATGAATTTGGAGTATTATGCTATAGACAGCCAGGGTTTTGTTACCAATAATGAGAGAGCTTTAGCGCAGCTTTATGGGGACAAGGACGATTCACGCGAAGCCGAAGCGTGTTTGAGTGAGATGGCTGCACGTGTAGCCACAGTCTTTGCTTCTTTAAGGGAATTTCCTATTGTTCGCTACCGAGCTGCCAATAGGATTGATGCCACCATGGAGACCACTTTTCGTGATTTAATTCCTACAAAGCTTGCTGCTGGTGTCTGGGATTGTCTCATGCATTACAAAAGAACAATTCCAAATTTCCCTCAGATAGAAACATGCGAGTTACTTATCCTTGACAGATCTGTGGATCAGATTGCTCCAATCATCCACGAGTGGACATACGATGCCTTGTGTCATGACTTGTTAGATATGGAAGGAAATAAATATGTGCATGAGGTTGCGAGCATAAACGGTGGTCCTCCTGACCAGAAAGATGTTCTTCTAGAGGAGCATGATCCTGTCTGGCTTGAACTTCGCGATCATCATTTAGGATTTGCCTTGGAATGGTTGAATTCAGAACTTTCCAATCTTAAGCAGAACAAGGCTGCACTATTCGAAAATTCAAGAGATGGGCAATGTCCTGAGCTATCTTCAAGGGAATTGAAAGAGATAACTGAAGCATTGCCACAGTATGTTGAACTAAAAGAAAAGCTCTCCCTTCATATAGAGATTGCATCGAAACTAAACAGAATTGTCAGGAACCTTGAGCTCCCATTCCTTTCGGAGCTGGAGCAGGGTCTTGTTTTTGGAGATGCAGGAATAAAAGAGGTGATCATGTTTCTGAGAATACATGGGCCGTATATTACTCGCGAACATAAGCTGCGCTTGTTGATGATTCTTGCTTACGCATATTTACTACCCCAGGATATGACTGTTGTGAGGAATATGAACAATGGTGCACTGTCAGAGGAATTATACCCATGTGTGAATCCCAACGCTCGTTTACTGAGATCGAGGAGGACACCAATGTGGGCCCACCGCCGGAATTCCGATAATGGGTTTTCAAGGGATGCATCTACTGATTTCGAAAAGATGGGCCGACGCATATTTGTAGTTATAGTAGGTGGAGCTACTAGATCAGAGCTTAGGGTTTGTCGGAAACTCACAGCAAAGCTCAAAAGGGAAGTTATTCTGGGCTCCTCATCTCTTGACCATCCTGCAACTTTTGTTACGAATCTGAAAATGATCACAGCAGACGACCAACCGCTCACGTTGGATGATATCCAGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0016020 GO:0019898 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04721 map04721

Pfam Domains

Protein Families

Sec1

Protein Analysis

572

Amino Acids

65.16

Weight (kDa)

6.21

Isoelectric Point (pI)

43.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	46 - 444	2.8e-84	Sec1 family
Sec1	PF00995	454 - 553	4.5e-11	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12360 AT4G12120
fragaria_vesca	FvH4_2g27020 FvH4_2g27020 FvH4_2g27020 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992
malus_domestica	MD04G1079000.v1.1 MD06G1073800.v1.1
prunus_persica	Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1
pyrus_communis	pycom04g07080 pycom06g05270
rosa_chinensis	RchiOBHm_Chr5g0038751 RchiOBHm_Chr6g0295901 RchiOBHm_Chr7g0201411
rosa_laevigata	RLG00000003677 RLG00000011758 RLG00000033865
rosa_multiflora	Rmu_sc0001469.1_g000008 Rmu_sc0005722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042410 Rroxscaffold_3G00255300 Rroxscaffold_7G00172070
rosa_rugosa	Rorug05G0173300.1 Rorug05G0173400 Rorug05G0173500 Rorug06G0255000 Rorug06G0255000 Rorug07G0063400 Rorug07G0063500
rosa_samantha	Rh5AG260700 Rh5BG264400 Rh5CG297100 Rh5DG272800 Rh6AG368700 Rh6BG376400 Rh6CG382600 Rh6DG369200 Rh7AG190300 Rh7BG192700 Rh7CG201800 Rh7DG195300
rosa_wichuraiana	Rw5G024070 Rw5G024360 Rw6G032150 Rw7G016710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	1693
AccII	CGCG	4 cut(s)	73, 543, 963, 1296
AciI	CCGC	2 cut(s)	1465, 1691
AclWI	GGATC	2 cut(s)	801, 935
AcsI	RAATTY	8 cut(s)	55, 155, 451, 608, 742, 997, 1045, 1471
AcuI	CTGAAG	1 cut(s)	1122
AcvI	CACGTG	1 cut(s)	578
AfaI	GTAC	1 cut(s)	141
AfiI	CCNNNNNNNGG	3 cut(s)	990, 1467, 1482
AflII	CTTAAG	1 cut(s)	1016
AflIII	ACRYGT	2 cut(s)	321, 577
AgsI	TTSAA	7 cut(s)	956, 997, 1050, 1080, 1090, 1124, 1491
AjnI	CCWGG	2 cut(s)	477, 1347
AleI	CACNNNNGTG	1 cut(s)	1453
Alw21I	GWGCWC	3 cut(s)	337, 1197, 1387
Alw26I	GTCTC	2 cut(s)	653, 719
Alw44I	GTGCAC	2 cut(s)	333, 1383
AlwI	GGATC	2 cut(s)	801, 935
AoxI	GGCC	4 cut(s)	284, 1280, 1458, 1522
ApaI	GGGCCC	1 cut(s)	1462
ApaLI	GTGCAC	2 cut(s)	333, 1383
ApeKI	GCWGC	7 cut(s)	247, 514, 572, 632, 695, 1031, 1306
ApoI	RAATTY	8 cut(s)	55, 155, 451, 608, 742, 997, 1045, 1471
Asp700I	GAANNNNTTC	2 cut(s)	96, 1614
AspLEI	GCGC	4 cut(s)	75, 231, 514, 1311
AspS9I	GGNCC	5 cut(s)	902, 1280, 1458, 1459, 1522
AsuC2I	CCSGG	1 cut(s)	115
AsuHPI	GGTGA	2 cut(s)	363, 1267
AsuII	TTCGAA	3 cut(s)	41, 1041, 1512
AvaII	GGWCC	1 cut(s)	902
BaeGI	GKGCMC	3 cut(s)	337, 1387, 1462
BanII	GRGCYC	3 cut(s)	1197, 1462, 1625
BauI	CACGAG	1 cut(s)	815
BbrPI	CACGTG	1 cut(s)	578
Bbv12I	GWGCWC	3 cut(s)	337, 1197, 1387
BbvI	GCAGC	7 cut(s)	259, 526, 559, 619, 682, 1018, 1293
BccI	CCATC	5 cut(s)	404, 562, 1049, 1513, 1647
BceAI	ACGGC	1 cut(s)	1267
BciT130I	CCWGG	2 cut(s)	479, 1349
BclI	TGATCA	2 cut(s)	1257, 1671
BcnI	CCSGG	1 cut(s)	115
BcoDI	GTCTC	2 cut(s)	653, 719
BfaI	CTAG	3 cut(s)	224, 929, 1560
BfmI	CTRYAG	2 cut(s)	49, 468
BfrI	CTTAAG	1 cut(s)	1016
BglII	AGATCT	2 cut(s)	785, 1713
BisI	GCNGC	7 cut(s)	248, 515, 573, 633, 696, 1032, 1307
BlsI	GCNGC	7 cut(s)	249, 516, 574, 634, 697, 1033, 1308
Bme1390I	CCNGG	3 cut(s)	115, 479, 1349
Bme18I	GGWCC	1 cut(s)	902
BmgT120I	GGNCC	5 cut(s)	902, 1280, 1458, 1459, 1522
BmiI	GGNNCC	5 cut(s)	16, 22, 1187, 1460, 1624
BmrFI	CCNGG	3 cut(s)	115, 479, 1349
BmsI	GCATC	7 cut(s)	256, 637, 820, 1169, 1228, 1486, 1508
BpmI	CTGGAG	1 cut(s)	1235
Bpu10I	CCTNAGC	2 cut(s)	1068, 1571
Bpu14I	TTCGAA	3 cut(s)	41, 1041, 1512
BpuEI	CTTGAG	1 cut(s)	1211
BpuMI	CCSGG	1 cut(s)	115
BsaAI	YACGTR	1 cut(s)	578
BsaI	GGTCTC	1 cut(s)	653
BsaJI	CCNNGG	5 cut(s)	261, 478, 654, 984, 1347
BsaWI	WCCGGW	2 cut(s)	17, 23
Bsc4I	CCNNNNNNNGG	3 cut(s)	990, 1467, 1482
Bse3DI	GCAATG	2 cut(s)	1067, 1106
BseBI	CCWGG	2 cut(s)	479, 1349
BseDI	CCNNGG	5 cut(s)	261, 478, 654, 984, 1347
BseGI	GGATG	7 cut(s)	271, 279, 415, 810, 1501, 1639, 1708
BseLI	CCNNNNNNNGG	3 cut(s)	990, 1467, 1482
BseMI	GCAATG	2 cut(s)	1067, 1106
BseMII	CTCAG	4 cut(s)	764, 1059, 1259, 1424
BseRI	GAGGAG	3 cut(s)	947, 1456, 1615
BseSI	GKGCMC	3 cut(s)	337, 1387, 1462
BseXI	GCAGC	7 cut(s)	259, 526, 559, 619, 682, 1018, 1293
BsgI	GTGCAG	2 cut(s)	558, 1017
Bsh1236I	CGCG	4 cut(s)	73, 543, 963, 1296
BshFI	GGCC	4 cut(s)	286, 1282, 1460, 1524
BsiHKAI	GWGCWC	3 cut(s)	337, 1197, 1387
BsiSI	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1468
BslFI	GGGAC	1 cut(s)	539
BslI	CCNNNNNNNGG	3 cut(s)	990, 1467, 1482
BsmAI	GTCTC	2 cut(s)	653, 719
BsmFI	GGGAC	1 cut(s)	539
BsnI	GGCC	4 cut(s)	286, 1282, 1460, 1524
Bso31I	GGTCTC	1 cut(s)	653
Bsp119I	TTCGAA	3 cut(s)	41, 1041, 1512
Bsp120I	GGGCCC	1 cut(s)	1458
Bsp1286I	GDGCHC	5 cut(s)	337, 1197, 1387, 1462, 1625
Bsp143I	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
Bsp19I	CCATGG	2 cut(s)	261, 654
Bsp68I	TCGCGA	2 cut(s)	963, 1296
BspACI	CCGC	2 cut(s)	1465, 1691
BspANI	GGCC	4 cut(s)	286, 1282, 1460, 1524
BspCNI	CTCAG	4 cut(s)	763, 1060, 1260, 1425
BspFNI	CGCG	4 cut(s)	73, 543, 963, 1296
BspHI	TCATGA	1 cut(s)	841
BspLI	GGNNCC	5 cut(s)	16, 22, 1187, 1460, 1624
BspPI	GGATC	2 cut(s)	801, 935
BspT104I	TTCGAA	3 cut(s)	41, 1041, 1512
BspTI	CTTAAG	1 cut(s)	1016
BspTNI	GGTCTC	1 cut(s)	653
BsrBI	CCGCTC	1 cut(s)	1693
BsrDI	GCAATG	2 cut(s)	1067, 1106
BssECI	CCNNGG	5 cut(s)	261, 478, 654, 984, 1347
BssMI	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
BssSI	CACGAG	1 cut(s)	815
BssT1I	CCWWGG	3 cut(s)	261, 654, 984
Bst2BI	CACGAG	1 cut(s)	815
Bst2UI	CCWGG	2 cut(s)	479, 1349
Bst4CI	ACNGT	5 cut(s)	589, 899, 1116, 1360, 1389
BstAFI	CTTAAG	1 cut(s)	1016
BstAPI	GCANNNNNTGC	1 cut(s)	94
BstBAI	YACGTR	1 cut(s)	578
BstBI	TTCGAA	3 cut(s)	41, 1041, 1512
BstC8I	GCNNGC	3 cut(s)	184, 693, 889
BstDEI	CTNAG	5 cut(s)	750, 1068, 1268, 1433, 1571
BstDSI	CCRYGG	2 cut(s)	261, 654
BstF5I	GGATG	7 cut(s)	271, 279, 415, 810, 1501, 1639, 1708
BstFNI	CGCG	4 cut(s)	73, 543, 963, 1296
BstHHI	GCGC	4 cut(s)	75, 231, 514, 1311
BstKTI	GATC	9 cut(s)	788, 796, 943, 967, 1260, 1439, 1565, 1674, 1716
BstMAI	GTCTC	2 cut(s)	653, 719
BstMBI	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
BstMWI	GCNNNNNNNGC	2 cut(s)	94, 581
BstNI	CCWGG	2 cut(s)	479, 1349
BstNSI	RCATGY	3 cut(s)	186, 325, 765
BstSCI	CCNGG	3 cut(s)	113, 477, 1347
BstSFI	CTRYAG	2 cut(s)	49, 468
BstSLI	GKGCMC	3 cut(s)	337, 1387, 1462
BstUI	CGCG	4 cut(s)	73, 543, 963, 1296
BstV1I	GCAGC	7 cut(s)	259, 526, 559, 619, 682, 1018, 1293
BstX2I	RGATCY	2 cut(s)	785, 1713
BstYI	RGATCY	2 cut(s)	785, 1713
BsuRI	GGCC	4 cut(s)	286, 1282, 1460, 1524
BtgI	CCRYGG	2 cut(s)	261, 654
BtsCI	GGATG	7 cut(s)	271, 279, 415, 810, 1501, 1639, 1708
BtsIMutI	CAGTG	1 cut(s)	1385
BtuMI	TCGCGA	2 cut(s)	963, 1296
Cac8I	GCNNGC	3 cut(s)	184, 693, 889
CciI	TCATGA	1 cut(s)	841
CfoI	GCGC	4 cut(s)	75, 231, 514, 1311
Cfr13I	GGNCC	5 cut(s)	902, 1280, 1458, 1459, 1522
CseI	GACGC	1 cut(s)	1536
Csp6I	GTAC	1 cut(s)	140
CspCI	CAANNNNNGTGG	2 cut(s)	574, 609
CviQI	GTAC	1 cut(s)	140
DdeI	CTNAG	5 cut(s)	750, 1068, 1268, 1433, 1571
DpnI	GATC	9 cut(s)	787, 795, 942, 966, 1259, 1438, 1564, 1673, 1715
DpnII	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
DraI	TTTAAA	1 cut(s)	61
Ecl136II	GAGCTC	1 cut(s)	1195
Eco130I	CCWWGG	3 cut(s)	261, 654, 984
Eco24I	GRGCYC	3 cut(s)	1197, 1462, 1625
Eco31I	GGTCTC	1 cut(s)	653
Eco32I	GATATC	1 cut(s)	1708
Eco47I	GGWCC	1 cut(s)	902
Eco53kI	GAGCTC	1 cut(s)	1195
Eco57I	CTGAAG	1 cut(s)	1122
Eco72I	CACGTG	1 cut(s)	578
EcoICRI	GAGCTC	1 cut(s)	1195
EcoRI	GAATTC	2 cut(s)	997, 1471
EcoRII	CCWGG	2 cut(s)	477, 1347
EcoRV	GATATC	1 cut(s)	1708
EcoT14I	CCWWGG	3 cut(s)	261, 654, 984
EcoT22I	ATGCAT	2 cut(s)	723, 1501
EcoT38I	GRGCYC	3 cut(s)	1197, 1462, 1625
ErhI	CCWWGG	3 cut(s)	261, 654, 984
FalI	AAGNNNNNCTT	6 cut(s)	322, 354, 909, 941, 1295, 1327
FaqI	GGGAC	1 cut(s)	539
FbaI	TGATCA	2 cut(s)	1257, 1671
Fnu4HI	GCNGC	7 cut(s)	248, 515, 573, 633, 696, 1032, 1307
FokI	GGATG	7 cut(s)	266, 278, 422, 797, 1508, 1626, 1715
FriOI	GRGCYC	3 cut(s)	1197, 1462, 1625
Fsp4HI	GCNGC	7 cut(s)	248, 515, 573, 633, 696, 1032, 1307
FspBI	CTAG	3 cut(s)	224, 929, 1560
GlaI	GCGC	4 cut(s)	74, 230, 513, 1310
GluI	GCNGC	7 cut(s)	248, 515, 573, 633, 696, 1032, 1307
GsuI	CTGGAG	1 cut(s)	1235
HaeIII	GGCC	4 cut(s)	286, 1282, 1460, 1524
HapII	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1468
HgaI	GACGC	1 cut(s)	1536
HhaI	GCGC	4 cut(s)	75, 231, 514, 1311
Hin6I	GCGC	4 cut(s)	73, 229, 512, 1309
HinP1I	GCGC	4 cut(s)	73, 229, 512, 1309
HindIII	AAGCTT	1 cut(s)	689
HinfI	GANTC	5 cut(s)	306, 536, 1321, 1414, 1660
HpaII	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1468
HphI	GGTGA	2 cut(s)	363, 1267
Hpy166II	GTNNAC	4 cut(s)	335, 822, 1385, 1430
Hpy8I	GTNNAC	4 cut(s)	335, 822, 1385, 1430
Hpy99I	CGWCG	1 cut(s)	1530
HpyAV	CCTTC	6 cut(s)	130, 203, 297, 343, 854, 1154
HpyCH4III	ACNGT	5 cut(s)	589, 899, 1116, 1360, 1389
HpyCH4IV	ACGT	2 cut(s)	577, 1697
HpyF10VI	GCNNNNNNNGC	2 cut(s)	94, 581
HpyF3I	CTNAG	5 cut(s)	750, 1068, 1268, 1433, 1571
HpySE526I	ACGT	2 cut(s)	577, 1697
HspAI	GCGC	4 cut(s)	73, 229, 512, 1309
Ksp22I	TGATCA	2 cut(s)	1257, 1671
Kzo9I	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
LmnI	GCTCC	8 cut(s)	20, 808, 934, 1200, 1210, 1216, 1553, 1628
Lsp1109I	GCAGC	7 cut(s)	259, 526, 559, 619, 682, 1018, 1293
LweI	GCATC	7 cut(s)	256, 637, 820, 1169, 1228, 1486, 1508
MaeI	CTAG	3 cut(s)	224, 929, 1560
MaeII	ACGT	2 cut(s)	577, 1697
MaeIII	GTNAC	4 cut(s)	67, 487, 768, 1654
MalI	GATC	9 cut(s)	787, 795, 942, 966, 1259, 1438, 1564, 1673, 1715
MbiI	CCGCTC	1 cut(s)	1693
MboI	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
MboII	GAAGA	3 cut(s)	301, 917, 1068
MflI	RGATCY	2 cut(s)	785, 1713
MhlI	GDGCHC	5 cut(s)	337, 1197, 1387, 1462, 1625
MmeI	TCCRAC	2 cut(s)	1562, 1680
Mph1103I	ATGCAT	2 cut(s)	723, 1501
MroXI	GAANNNNTTC	2 cut(s)	96, 1614
MseI	TTAA	4 cut(s)	60, 602, 677, 1017
MslI	CAYNNNNRTG	1 cut(s)	1453
MspCI	CTTAAG	1 cut(s)	1016
MspI	CCGG	6 cut(s)	12, 18, 24, 114, 283, 1468
MspR9I	CCNGG	3 cut(s)	115, 479, 1349
MvaI	CCWGG	2 cut(s)	479, 1349
MvnI	CGCG	4 cut(s)	73, 543, 963, 1296
MwoI	GCNNNNNNNGC	2 cut(s)	94, 581
NciI	CCSGG	1 cut(s)	115
NcoI	CCATGG	2 cut(s)	261, 654
NdeII	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
NlaIV	GGNNCC	5 cut(s)	16, 22, 1187, 1460, 1624
NmuCI	GTSAC	1 cut(s)	67
NruI	TCGCGA	2 cut(s)	963, 1296
NsiI	ATGCAT	2 cut(s)	723, 1501
NspI	RCATGY	3 cut(s)	186, 325, 765
NspV	TTCGAA	3 cut(s)	41, 1041, 1512
OliI	CACNNNNGTG	1 cut(s)	1453
PaeI	GCATGC	1 cut(s)	186
PagI	TCATGA	1 cut(s)	841
PciI	ACATGT	1 cut(s)	321
PcsI	WCGNNNNNNNCGW	1 cut(s)	540
PdmI	GAANNNNTTC	2 cut(s)	96, 1614
PfeI	GAWTC	5 cut(s)	306, 536, 1321, 1414, 1660
PkrI	GCNGC	7 cut(s)	249, 516, 574, 634, 697, 1033, 1308
PmaCI	CACGTG	1 cut(s)	578
PmlI	CACGTG	1 cut(s)	578
Ppu21I	YACGTR	1 cut(s)	578
PscI	ACATGT	1 cut(s)	321
Psp124BI	GAGCTC	1 cut(s)	1197
Psp6I	CCWGG	2 cut(s)	477, 1347
PspCI	CACGTG	1 cut(s)	578
PspGI	CCWGG	2 cut(s)	477, 1347
PspN4I	GGNNCC	5 cut(s)	16, 22, 1187, 1460, 1624
PspOMI	GGGCCC	1 cut(s)	1458
PspPI	GGNCC	5 cut(s)	902, 1280, 1458, 1459, 1522
PsuI	RGATCY	2 cut(s)	785, 1713
RruI	TCGCGA	2 cut(s)	963, 1296
RsaI	GTAC	1 cut(s)	141
RsaNI	GTAC	1 cut(s)	140
RseI	CAYNNNNRTG	1 cut(s)	1453
SacI	GAGCTC	1 cut(s)	1197
SaqAI	TTAA	4 cut(s)	60, 602, 677, 1017
SatI	GCNGC	7 cut(s)	248, 515, 573, 633, 696, 1032, 1307
Sau3AI	GATC	9 cut(s)	785, 793, 940, 964, 1257, 1436, 1562, 1671, 1713
Sau96I	GGNCC	5 cut(s)	902, 1280, 1458, 1459, 1522
ScrFI	CCNGG	3 cut(s)	115, 479, 1349
SduI	GDGCHC	5 cut(s)	337, 1197, 1387, 1462, 1625
SfaNI	GCATC	7 cut(s)	256, 637, 820, 1169, 1228, 1486, 1508
SfcI	CTRYAG	2 cut(s)	49, 468
SfuI	TTCGAA	3 cut(s)	41, 1041, 1512
SinI	GGWCC	1 cut(s)	902
SmiMI	CAYNNNNRTG	1 cut(s)	1453
SmlI	CTYRAG	2 cut(s)	1016, 1190
SmoI	CTYRAG	2 cut(s)	1016, 1190
SphI	GCATGC	1 cut(s)	186
SsiI	CCGC	2 cut(s)	1465, 1691
SspMI	CTAG	3 cut(s)	224, 929, 1560
SstI	GAGCTC	1 cut(s)	1197
StyD4I	CCNGG	3 cut(s)	113, 477, 1347
StyI	CCWWGG	3 cut(s)	261, 654, 984
TaaI	ACNGT	5 cut(s)	589, 899, 1116, 1360, 1389
TaiI	ACGT	2 cut(s)	580, 1700
TaqI	TCGA	6 cut(s)	41, 380, 1041, 1163, 1439, 1512
TaqII	GACCGA	1 cut(s)	90
TfiI	GAWTC	5 cut(s)	306, 536, 1321, 1414, 1660
Tru1I	TTAA	4 cut(s)	60, 602, 677, 1017
Tru9I	TTAA	4 cut(s)	60, 602, 677, 1017
TscAI	CASTG	1 cut(s)	1392
TseFI	GTSAC	1 cut(s)	67
TseI	GCWGC	7 cut(s)	247, 514, 572, 632, 695, 1031, 1306
Tsp45I	GTSAC	1 cut(s)	67
TspDTI	ATGAA	6 cut(s)	105, 222, 268, 464, 1136, 1388
TspRI	CASTG	1 cut(s)	1392
Vha464I	CTTAAG	1 cut(s)	1016
VneI	GTGCAC	2 cut(s)	333, 1383
VpaK11BI	GGWCC	1 cut(s)	902
XapI	RAATTY	8 cut(s)	55, 155, 451, 608, 742, 997, 1045, 1471
XbaI	TCTAGA	1 cut(s)	928
XceI	RCATGY	3 cut(s)	186, 325, 765
XmnI	GAANNNNTTC	2 cut(s)	96, 1614
XspI	CTAG	3 cut(s)	224, 929, 1560
Zsp2I	ATGCAT	2 cut(s)	723, 1501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.