Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0001124

Physical Location & Seq

Genomic Coordinates Reverse (-)

10842635 .. 10852593

Gene Structure 9959 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1079000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGTCGTTCTCTGACACCGACTCCTCGTCGTCCTACGGCGGCGACTACAAGAATTTCAAGCAAATCACCCGCGACCGATTGTTAATTGAAATGCTTCGGTCTTGCAAAACGGGGGACTCAACAGCAACCTGGAAGGTACTTATCGTGGACAAACTTACTCTTAACATAATATCTCACGCGTGCAAAATGTCCGACACGACAGATGAAGGTGTTTCAGTGGTTGAAGACATAGTTAAGCGAAGGCAGCCAATGCCCTCCAGGGATGCTATATACTTCATGCAGCCTACCAAAGAGAATGTTGTCATGTTCTTGTCAGACATGTCGGGAAGGTCACCATTGTACAGGAAGGCATTTGTTTTCTTTAGTTCACCTATTTCAAGAGAATTAGTTAGTCACATCAAGAAGGATGGAACTGTGTTAACTCGGATAGCTAAATTGATTGAGATGAATTTGGAATATTGTGCAATAGACAGTCAGGCTTTTGTTACCAACAACGAGAGGGCTTTAGAAGAACTTTATGGGGATGATGAGGATTCACGCAAAGGTGTTGCATGTTTGAATGTGATGGCTGCTCGTGTTGCCACAGTTTTTGCTTCGTTAAGGGAATTTCCTTTTGTGCGTTATCGAGCTGCAAAGTCACTTGATGCCACCACAATGACCACTTTTCGTGATTTAATTCCTACAAAGCTTGCGGCTGGGATCTGGGATTGTCTCATGAAATATAAAACTACAATTAAGAACTTCCCTGAGACAGAAACATGCGAGTTGCTTATCCTTGACAGATCTGTAGATCAGATTGCACCTATCATACACGAATGGACATATGACGCCATGTGTCATGACTTGCTAAATATGGATGGAAATAAGTACGCGCATGAGGTTCCAAGCAAAACTGGTGGTCCACCTGAGGAAAAAGTGGTTCTTTTAGAAGATCATGATCCTGTCTGGCTTGAGCTTCGCCACACACATATAGCAGATGCTAGCGAACGACTGCATGATAAAATGACCAACTTCGTATCAAGGAATAAGGCTGCACAGATCCACGGTTCAAGAGATGCTCGTGAACTATCTACGAGGGATTTGCAAAAGATGGTTCAAGCGTTGCCACAATATAGTGAACAAATCGACAAGCTCTCCCTTCACGTAGAGATTGCAGGAAAAGTTAACAGAATTATCCGGGAGCTTGGGCTTCGAGAAGTTGGGCAGCTGGAGCAGGATCTTGTTTTTGGAGATGCGGGCATGAAAGATGTGATCAATTTTTTGATGACAAAAGAGGATACAACTGGTGAAAATAAGTTGCGATTGTTGATGATTCTTGCAGCCATTTATCCTGAGAAATTTGAAGGCGAGAAGGGTCTCAATTTGATGAAGTTAGCAAAATTATCACCCAATGATATGAATGCTGTGAATAATATGAGACTGCTTGGGGGAGCACCAGATACCCAAAAAAGCACAGGGGCTTTTTCTCTGAAGTTTGACATTCATAAGAAGAAACGTGGAGCTAGGAAAGAACGTCCAAGTGAAGGAGAAACATGGCAGCTTGCACGCTTTTATCCAATAATAGAGGAACTTGTAGAAAACCTTAGTAAAGGTGAACTGTCAAAGGAAGATTATCCATGTTTGAATGACCCAAGTCCAACTTTTCACGGGAGGTCACATGTCACGGCAATAAATCATCCTCCAGTTGCTCATTCAATGAGATCAAGACGGACACCAACATGGGCCCGACCTCGAAATTCTGATGATGGGTATTCAAGTGATCCAGTATTACGGCATGCATCGAGTGATTTCAAAAAGATGGGTCAGCGCATATTTGTAGTTATAGTAGGTGGGGCTACTAGGTCGGAGCTTAGGGTTTGCCACAAGCTCACAGCTAAACTGAAGAGGGAAGTTGTTCTAGGCTCCTCATGTCTCGAGGATCCTGCTCCTTTTATTGCGAAACTAAAGAGGATGACGGCACATGAGCTCTCTTTGGATGATCTGCAGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0016020 GO:0019898 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04721 map04721

Pfam Domains

Protein Families

Sec1

Protein Analysis

664

Amino Acids

74.96

Weight (kDa)

7.62

Isoelectric Point (pI)

48.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec1	PF00995	45 - 645	7.2e-123	Sec1 family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12360 AT4G12120
fragaria_vesca	FvH4_2g27020 FvH4_2g27020 FvH4_2g27020 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992
malus_domestica	MD04G1079000.v1.1 MD06G1073800.v1.1
prunus_persica	Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1
pyrus_communis	pycom04g07080 pycom06g05270
rosa_chinensis	RchiOBHm_Chr5g0038751 RchiOBHm_Chr6g0295901 RchiOBHm_Chr7g0201411
rosa_laevigata	RLG00000003677 RLG00000011758 RLG00000033865
rosa_multiflora	Rmu_sc0001469.1_g000008 Rmu_sc0005722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042410 Rroxscaffold_3G00255300 Rroxscaffold_7G00172070
rosa_rugosa	Rorug05G0173300.1 Rorug05G0173400 Rorug05G0173500 Rorug06G0255000 Rorug06G0255000 Rorug07G0063400 Rorug07G0063500
rosa_samantha	Rh5AG260700 Rh5BG264400 Rh5CG297100 Rh5DG272800 Rh6AG368700 Rh6BG376400 Rh6CG382600 Rh6DG369200 Rh7AG190300 Rh7BG192700 Rh7CG201800 Rh7DG195300
rosa_wichuraiana	Rw5G024070 Rw5G024360 Rw6G032150 Rw7G016710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	72, 179, 872
AciI	CCGC	4 cut(s)	39, 70, 692, 1235
AclWI	GGATC	7 cut(s)	707, 932, 1033, 1224, 1754, 1913, 1926
AcsI	RAATTY	5 cut(s)	52, 448, 605, 1337, 1735
AcuI	CTGAAG	2 cut(s)	1490, 1901
AcyI	GRCGYC	1 cut(s)	828
AfaI	GTAC	3 cut(s)	138, 341, 869
AfiI	CCNNNNNNNGG	1 cut(s)	1523
AflIII	ACRYGT	3 cut(s)	177, 318, 1657
AhdI	GACNNNNNGTC	1 cut(s)	25
AjnI	CCWGG	2 cut(s)	128, 257
Alw21I	GWGCWC	2 cut(s)	1435, 1968
Alw26I	GTCTC	5 cut(s)	716, 743, 1361, 1411, 1916
AlwI	GGATC	7 cut(s)	707, 932, 1033, 1224, 1754, 1913, 1926
Ama87I	CYCGRG	1 cut(s)	1913
AoxI	GGCC	1 cut(s)	1722
ApaI	GGGCCC	1 cut(s)	1726
ApeKI	GCWGC	8 cut(s)	244, 280, 569, 629, 1031, 1204, 1319, 1537
ApoI	RAATTY	5 cut(s)	52, 448, 605, 1337, 1735
Asp700I	GAANNNNTTC	2 cut(s)	93, 1893
AspLEI	GCGC	2 cut(s)	874, 1809
AspS9I	GGNCC	3 cut(s)	899, 1722, 1723
AsuC2I	CCSGG	1 cut(s)	1178
AsuHPI	GGTGA	6 cut(s)	58, 324, 360, 1298, 1377, 1604
AsuNHI	GCTAGC	1 cut(s)	980
AvaI	CYCGRG	1 cut(s)	1913
AvaII	GGWCC	1 cut(s)	899
AxyI	CCTNAGG	1 cut(s)	906
BaeGI	GKGCMC	1 cut(s)	1726
BamHI	GGATCC	1 cut(s)	1918
BanII	GRGCYC	2 cut(s)	1726, 1968
BauI	CACGAG	2 cut(s)	573, 1059
BbsI	GAAGAC	1 cut(s)	231
Bbv12I	GWGCWC	2 cut(s)	1435, 1968
BbvI	GCAGC	8 cut(s)	256, 292, 556, 616, 1018, 1216, 1331, 1549
BccI	CCATC	6 cut(s)	401, 559, 851, 1084, 1739, 1792
BceAI	ACGGC	4 cut(s)	52, 1680, 1787, 1971
BcgI	CGANNNNNNTGC	4 cut(s)	1063, 1097, 1904, 1938
BciT130I	CCWGG	2 cut(s)	130, 259
BciVI	GTATCC	1 cut(s)	1270
BclI	TGATCA	1 cut(s)	1251
BcnI	CCSGG	1 cut(s)	1178
BcoDI	GTCTC	5 cut(s)	716, 743, 1361, 1411, 1916
BfaI	CTAG	4 cut(s)	981, 1503, 1839, 1898
BfmI	CTRYAG	2 cut(s)	786, 1982
BfuI	GTATCC	1 cut(s)	1270
BglII	AGATCT	1 cut(s)	782
Bme1390I	CCNGG	3 cut(s)	130, 259, 1178
Bme18I	GGWCC	1 cut(s)	899
BmeRI	GACNNNNNGTC	1 cut(s)	25
BmeT110I	CYCGRG	1 cut(s)	1913
BmgT120I	GGNCC	3 cut(s)	899, 1722, 1723
BmiI	GGNNCC	4 cut(s)	882, 1724, 1903, 1920
BmrFI	CCNGG	3 cut(s)	130, 259, 1178
BmsI	GCATC	6 cut(s)	253, 634, 967, 1045, 1222, 1787
BmtI	GCTAGC	1 cut(s)	984
BoxI	GACNNNNGTC	1 cut(s)	1632
BpiI	GAAGAC	1 cut(s)	231
BpmI	CTGGAG	3 cut(s)	241, 1229, 1665
Bpu10I	CCTNAGC	1 cut(s)	1850
BpuEI	CTTGAG	1 cut(s)	971
BpuMI	CCSGG	1 cut(s)	1178
BsaAI	YACGTR	1 cut(s)	1144
BsaBI	GATNNNNATC	1 cut(s)	936
BsaHI	GRCGYC	1 cut(s)	828
BsaI	GGTCTC	1 cut(s)	1361
BsaJI	CCNNGG	2 cut(s)	258, 1042
BsaXI	ACNNNNNCTCC	4 cut(s)	5, 35, 1118, 1148
Bsc4I	CCNNNNNNNGG	1 cut(s)	1523
Bse1I	ACTGG	4 cut(s)	898, 1288, 1682, 1763
Bse21I	CCTNAGG	1 cut(s)	906
Bse8I	GATNNNNATC	1 cut(s)	936
BseBI	CCWGG	2 cut(s)	130, 259
BseDI	CCNNGG	2 cut(s)	258, 1042
BseGI	GGATG	7 cut(s)	268, 412, 529, 862, 1675, 1956, 1981
BseJI	GATNNNNATC	1 cut(s)	936
BseLI	CCNNNNNNNGG	1 cut(s)	1523
BseMII	CTCAG	3 cut(s)	738, 897, 1323
BseNI	ACTGG	4 cut(s)	898, 1288, 1682, 1763
BseRI	GAGGAG	2 cut(s)	13, 1894
BseSI	GKGCMC	1 cut(s)	1726
BseXI	GCAGC	8 cut(s)	256, 292, 556, 616, 1018, 1216, 1331, 1549
BseYI	CCCAGC	1 cut(s)	695
BsgI	GTGCAG	1 cut(s)	1017
Bsh1236I	CGCG	3 cut(s)	72, 179, 872
Bsh1285I	CGRYCG	1 cut(s)	76
BshFI	GGCC	1 cut(s)	1724
BsiEI	CGRYCG	1 cut(s)	76
BsiHKAI	GWGCWC	2 cut(s)	1435, 1968
BsiHKCI	CYCGRG	1 cut(s)	1913
BsiSI	CCGG	1 cut(s)	1177
BslFI	GGGAC	1 cut(s)	128
BslI	CCNNNNNNNGG	1 cut(s)	1523
BsmAI	GTCTC	5 cut(s)	716, 743, 1361, 1411, 1916
BsmFI	GGGAC	1 cut(s)	128
BsmI	GAATGC	1 cut(s)	1405
BsnI	GGCC	1 cut(s)	1724
Bso31I	GGTCTC	1 cut(s)	1361
BsoBI	CYCGRG	1 cut(s)	1913
Bsp120I	GGGCCC	1 cut(s)	1722
Bsp1286I	GDGCHC	3 cut(s)	1435, 1726, 1968
Bsp1407I	TGTACA	1 cut(s)	339
BspACI	CCGC	4 cut(s)	39, 70, 692, 1235
BspANI	GGCC	1 cut(s)	1724
BspCNI	CTCAG	3 cut(s)	739, 898, 1324
BspFNI	CGCG	3 cut(s)	72, 179, 872
BspHI	TCATGA	3 cut(s)	714, 838, 934
BspLI	GGNNCC	4 cut(s)	882, 1724, 1903, 1920
BspMAI	CTGCAG	1 cut(s)	1986
BspOI	GCTAGC	1 cut(s)	984
BspPI	GGATC	7 cut(s)	707, 932, 1033, 1224, 1754, 1913, 1926
BspTNI	GGTCTC	1 cut(s)	1361
BsrGI	TGTACA	1 cut(s)	339
BsrI	ACTGG	4 cut(s)	898, 1288, 1682, 1763
BssECI	CCNNGG	2 cut(s)	258, 1042
BssNI	GRCGYC	1 cut(s)	828
BssSI	CACGAG	2 cut(s)	573, 1059
Bst2BI	CACGAG	2 cut(s)	573, 1059
Bst2UI	CCWGG	2 cut(s)	130, 259
Bst4CI	ACNGT	5 cut(s)	415, 473, 586, 1046, 1599
Bst6I	CTCTTC	1 cut(s)	1877
BstACI	GRCGYC	1 cut(s)	828
BstAPI	GCANNNNNTGC	1 cut(s)	250
BstAUI	TGTACA	1 cut(s)	339
BstBAI	YACGTR	1 cut(s)	1144
BstC8I	GCNNGC	7 cut(s)	181, 690, 982, 1237, 1542, 1546, 1776
BstDEI	CTNAG	5 cut(s)	747, 906, 1332, 1583, 1850
BstDSI	CCRYGG	1 cut(s)	1042
BstEII	GGTNACC	1 cut(s)	330
BstF5I	GGATG	7 cut(s)	268, 412, 529, 862, 1675, 1956, 1981
BstFNI	CGCG	3 cut(s)	72, 179, 872
BstHHI	GCGC	2 cut(s)	874, 1809
BstMAI	GTCTC	5 cut(s)	716, 743, 1361, 1411, 1916
BstMCI	CGRYCG	1 cut(s)	76
BstMWI	GCNNNNNNNGC	4 cut(s)	244, 250, 578, 1210
BstNI	CCWGG	2 cut(s)	130, 259
BstNSI	RCATGY	5 cut(s)	322, 555, 762, 1661, 1778
BstPAI	GACNNNNGTC	1 cut(s)	1632
BstPI	GGTNACC	1 cut(s)	330
BstSCI	CCNGG	3 cut(s)	128, 257, 1176
BstSFI	CTRYAG	2 cut(s)	786, 1982
BstSLI	GKGCMC	1 cut(s)	1726
BstUI	CGCG	3 cut(s)	72, 179, 872
BstV1I	GCAGC	8 cut(s)	256, 292, 556, 616, 1018, 1216, 1331, 1549
BstV2I	GAAGAC	1 cut(s)	231
BstX2I	RGATCY	5 cut(s)	699, 782, 1038, 1216, 1918
BstYI	RGATCY	5 cut(s)	699, 782, 1038, 1216, 1918
Bsu36I	CCTNAGG	1 cut(s)	906
BsuI	GTATCC	1 cut(s)	1270
BsuRI	GGCC	1 cut(s)	1724
BtgI	CCRYGG	1 cut(s)	1042
BtsCI	GGATG	7 cut(s)	268, 412, 529, 862, 1675, 1956, 1981
BtsIMutI	CAGTG	1 cut(s)	222
Cac8I	GCNNGC	7 cut(s)	181, 690, 982, 1237, 1542, 1546, 1776
CciI	TCATGA	3 cut(s)	714, 838, 934
CfoI	GCGC	2 cut(s)	874, 1809
Cfr13I	GGNCC	3 cut(s)	899, 1722, 1723
CseI	GACGC	1 cut(s)	836
Csp6I	GTAC	3 cut(s)	137, 340, 868
CspCI	CAANNNNNGTGG	4 cut(s)	571, 606, 877, 912
CviQI	GTAC	3 cut(s)	137, 340, 868
DdeI	CTNAG	5 cut(s)	747, 906, 1332, 1583, 1850
DriI	GACNNNNNGTC	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	1877
Eam1105I	GACNNNNNGTC	1 cut(s)	25
EarI	CTCTTC	1 cut(s)	1877
Ecl136II	GAGCTC	1 cut(s)	1966
Eco24I	GRGCYC	2 cut(s)	1726, 1968
Eco31I	GGTCTC	1 cut(s)	1361
Eco47I	GGWCC	1 cut(s)	899
Eco53kI	GAGCTC	1 cut(s)	1966
Eco57I	CTGAAG	2 cut(s)	1490, 1901
Eco81I	CCTNAGG	1 cut(s)	906
Eco88I	CYCGRG	1 cut(s)	1913
Eco91I	GGTNACC	1 cut(s)	330
EcoICRI	GAGCTC	1 cut(s)	1966
EcoO65I	GGTNACC	1 cut(s)	330
EcoRII	CCWGG	2 cut(s)	128, 257
EcoT22I	ATGCAT	1 cut(s)	1780
EcoT38I	GRGCYC	2 cut(s)	1726, 1968
FalI	AAGNNNNNCTT	4 cut(s)	906, 938, 1624, 1656
FaqI	GGGAC	1 cut(s)	128
FauI	CCCGC	2 cut(s)	77, 1228
FauNDI	CATATG	1 cut(s)	823
FbaI	TGATCA	1 cut(s)	1251
FokI	GGATG	7 cut(s)	275, 419, 536, 869, 1662, 1963, 1988
FriOI	GRGCYC	2 cut(s)	1726, 1968
FspBI	CTAG	4 cut(s)	981, 1503, 1839, 1898
GlaI	GCGC	2 cut(s)	873, 1808
GsaI	CCCAGC	1 cut(s)	699
GsuI	CTGGAG	3 cut(s)	241, 1229, 1665
HaeIII	GGCC	1 cut(s)	1724
HapII	CCGG	1 cut(s)	1177
HgaI	GACGC	1 cut(s)	836
HhaI	GCGC	2 cut(s)	874, 1809
Hin1I	GRCGYC	1 cut(s)	828
Hin6I	GCGC	2 cut(s)	872, 1807
HinP1I	GCGC	2 cut(s)	872, 1807
HincII	GTYRAC	2 cut(s)	420, 1165
HindII	GTYRAC	2 cut(s)	420, 1165
HindIII	AAGCTT	1 cut(s)	686
HinfI	GANTC	4 cut(s)	20, 116, 533, 1312
HpaI	GTTAAC	2 cut(s)	420, 1165
HpaII	CCGG	1 cut(s)	1177
HphI	GGTGA	6 cut(s)	58, 324, 360, 1298, 1377, 1604
Hpy166II	GTNNAC	8 cut(s)	148, 368, 420, 902, 1064, 1118, 1165, 1595
Hpy188I	TCNGA	8 cut(s)	13, 193, 316, 426, 795, 1470, 1741, 1846
Hpy8I	GTNNAC	8 cut(s)	148, 368, 420, 902, 1064, 1118, 1165, 1595
Hpy99I	CGWCG	1 cut(s)	31
HpyCH4III	ACNGT	5 cut(s)	415, 473, 586, 1046, 1599
HpyCH4IV	ACGT	3 cut(s)	1143, 1495, 1513
HpyF10VI	GCNNNNNNNGC	4 cut(s)	244, 250, 578, 1210
HpyF3I	CTNAG	5 cut(s)	747, 906, 1332, 1583, 1850
HpySE526I	ACGT	3 cut(s)	1143, 1495, 1513
Hsp92I	GRCGYC	1 cut(s)	828
HspAI	GCGC	2 cut(s)	872, 1807
Ksp22I	TGATCA	1 cut(s)	1251
KspAI	GTTAAC	2 cut(s)	420, 1165
LmnI	GCTCC	7 cut(s)	1180, 1210, 1430, 1499, 1846, 1907, 1930
Lsp1109I	GCAGC	8 cut(s)	256, 292, 556, 616, 1018, 1216, 1331, 1549
LweI	GCATC	6 cut(s)	253, 634, 967, 1045, 1222, 1787
MaeI	CTAG	4 cut(s)	981, 1503, 1839, 1898
MaeII	ACGT	3 cut(s)	1143, 1495, 1513
MaeIII	GTNAC	6 cut(s)	330, 392, 484, 636, 1653, 1660
MboII	GAAGA	6 cut(s)	236, 521, 941, 1501, 1619, 1894
MflI	RGATCY	5 cut(s)	699, 782, 1038, 1216, 1918
MhlI	GDGCHC	3 cut(s)	1435, 1726, 1968
MluI	ACGCGT	1 cut(s)	177
MlyI	GAGTC	2 cut(s)	14, 110
MmeI	TCCRAC	3 cut(s)	216, 1661, 1824
Mph1103I	ATGCAT	1 cut(s)	1780
MroXI	GAANNNNTTC	2 cut(s)	93, 1893
MseI	TTAA	8 cut(s)	83, 162, 234, 419, 599, 674, 735, 1164
MslI	CAYNNNNRTG	2 cut(s)	653, 1717
MspA1I	CMGCKG	1 cut(s)	1207
MspI	CCGG	1 cut(s)	1177
MspR9I	CCNGG	3 cut(s)	130, 259, 1178
Mva1269I	GAATGC	1 cut(s)	1405
MvaI	CCWGG	2 cut(s)	130, 259
MvnI	CGCG	3 cut(s)	72, 179, 872
MwoI	GCNNNNNNNGC	4 cut(s)	244, 250, 578, 1210
NciI	CCSGG	1 cut(s)	1178
NdeI	CATATG	1 cut(s)	823
NheI	GCTAGC	1 cut(s)	980
NlaIV	GGNNCC	4 cut(s)	882, 1724, 1903, 1920
NmuCI	GTSAC	5 cut(s)	330, 392, 636, 1653, 1660
NsiI	ATGCAT	1 cut(s)	1780
NspI	RCATGY	5 cut(s)	322, 555, 762, 1661, 1778
PaeI	GCATGC	1 cut(s)	1778
PaeR7I	CTCGAG	1 cut(s)	1913
PagI	TCATGA	3 cut(s)	714, 838, 934
PciI	ACATGT	2 cut(s)	318, 1657
PctI	GAATGC	1 cut(s)	1405
PdmI	GAANNNNTTC	2 cut(s)	93, 1893
PfeI	GAWTC	2 cut(s)	533, 1312
PfoI	TCCNGGA	1 cut(s)	1176
PleI	GAGTC	2 cut(s)	14, 110
PpsI	GAGTC	2 cut(s)	14, 110
Ppu21I	YACGTR	1 cut(s)	1144
PscI	ACATGT	2 cut(s)	318, 1657
PshAI	GACNNNNGTC	1 cut(s)	1632
Psp124BI	GAGCTC	1 cut(s)	1968
Psp6I	CCWGG	2 cut(s)	128, 257
PspEI	GGTNACC	1 cut(s)	330
PspFI	CCCAGC	1 cut(s)	695
PspGI	CCWGG	2 cut(s)	128, 257
PspN4I	GGNNCC	4 cut(s)	882, 1724, 1903, 1920
PspOMI	GGGCCC	1 cut(s)	1722
PspPI	GGNCC	3 cut(s)	899, 1722, 1723
PstI	CTGCAG	1 cut(s)	1986
PsuI	RGATCY	5 cut(s)	699, 782, 1038, 1216, 1918
PvuII	CAGCTG	1 cut(s)	1207
RsaI	GTAC	3 cut(s)	138, 341, 869
RsaNI	GTAC	3 cut(s)	137, 340, 868
RseI	CAYNNNNRTG	2 cut(s)	653, 1717
SacI	GAGCTC	1 cut(s)	1968
SaqAI	TTAA	8 cut(s)	83, 162, 234, 419, 599, 674, 735, 1164
Sau96I	GGNCC	3 cut(s)	899, 1722, 1723
SchI	GAGTC	2 cut(s)	14, 110
ScrFI	CCNGG	3 cut(s)	130, 259, 1178
SduI	GDGCHC	3 cut(s)	1435, 1726, 1968
SfaNI	GCATC	6 cut(s)	253, 634, 967, 1045, 1222, 1787
SfcI	CTRYAG	2 cut(s)	786, 1982
Sfr274I	CTCGAG	1 cut(s)	1913
SinI	GGWCC	1 cut(s)	899
SlaI	CTCGAG	1 cut(s)	1913
SmiMI	CAYNNNNRTG	2 cut(s)	653, 1717
SmlI	CTYRAG	2 cut(s)	950, 1913
SmoI	CTYRAG	2 cut(s)	950, 1913
SphI	GCATGC	1 cut(s)	1778
SsiI	CCGC	4 cut(s)	39, 70, 692, 1235
SspI	AATATT	1 cut(s)	458
SspMI	CTAG	4 cut(s)	981, 1503, 1839, 1898
SstI	GAGCTC	1 cut(s)	1968
StyD4I	CCNGG	3 cut(s)	128, 257, 1176
TaaI	ACNGT	5 cut(s)	415, 473, 586, 1046, 1599
TaiI	ACGT	3 cut(s)	1146, 1498, 1516
TaqI	TCGA	6 cut(s)	625, 1125, 1192, 1732, 1781, 1914
TaqII	GACCGA	2 cut(s)	87, 90
TatI	WGTACW	1 cut(s)	339
TauI	GCSGC	2 cut(s)	42, 695
TfiI	GAWTC	2 cut(s)	533, 1312
Tru1I	TTAA	8 cut(s)	83, 162, 234, 419, 599, 674, 735, 1164
Tru9I	TTAA	8 cut(s)	83, 162, 234, 419, 599, 674, 735, 1164
TscAI	CASTG	1 cut(s)	222
TseFI	GTSAC	5 cut(s)	330, 392, 636, 1653, 1660
TseI	GCWGC	8 cut(s)	244, 280, 569, 629, 1031, 1204, 1319, 1537
Tsp45I	GTSAC	5 cut(s)	330, 392, 636, 1653, 1660
TspDTI	ATGAA	8 cut(s)	219, 265, 461, 731, 1256, 1382, 1412, 1472
TspGWI	ACGGA	1 cut(s)	1723
TspRI	CASTG	1 cut(s)	222
VpaK11BI	GGWCC	1 cut(s)	899
XapI	RAATTY	5 cut(s)	52, 448, 605, 1337, 1735
XceI	RCATGY	5 cut(s)	322, 555, 762, 1661, 1778
XhoI	CTCGAG	1 cut(s)	1913
XmnI	GAANNNNTTC	2 cut(s)	93, 1893
XspI	CTAG	4 cut(s)	981, 1503, 1839, 1898
Zsp2I	ATGCAT	1 cut(s)	1780

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.