Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001124

Physical Location & Seq

Genomic Coordinates Reverse (-)

4789761 .. 4791402

Gene Structure 1642 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0063400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGAAGGCTTCAAAATCCATCTCTCCCTTCAGGCTTTCCTCTCTTCTACGCATCCAAAAGGACCCAGCTCTCGCCCTCCAACTCTTCCAAAACCCTAAGCCTGATTCAAACCCCCAACCCCAAAAGCCCTTTCGCTACTCTCTTCTTTCCTACGACCTCATAATCTCCAAGCTCGGCCGCGCCAAAATGTTCGACCAATTGGAGCAAATCCTCCACCAAATGAAGCAAGAAACCCGTTTTGCTCCGCCCGAAATCATCTTCTGCAATGTCATGTCATACTACGGCCGGGCTCGTCTCGCTGACCGTGCACTCCAAGTGTTCGATGAAATGCCTTCTTTCCGTTGCCAGCGGACTATCAAATCATTCAATTCATTGCTAAATGCGCTTTTCAAATGTGGGAAATTTGAGAAGATGAAGAAGGTCTTGGAGGGGATTGAGGATTATGGGACCCCCGATGCGTGTACTTACAATATATTGATCAAGGCTTTTTGTGGGAGTGAGGATTTGGATAATGCACGGAAGGTGTTTGATGAAATGCGCAGCAAGGGTCTTCAACCGAGTGATGTGACATTGGGGACTTTAGTTCACAAGCTTTGTTCGGATTCTAGGGTGAAAGAAGCTTTGGAGTTGAAAGAGGATTGGGAACGCGTTCATGGAGTTTTGCCTAATGCTTTCGTTTATGCGTCGTTGATGAAAGGATTTTGTGGGATTGGTGAAATGGCATTGGCTTTTGGCCTTAAGGATGAGATGGTAAGGAAGAACATTCGGTTGGATGCAGCGGTTTATTCTACTTTGATCAGTGCGCTTCTAAAGGCCGGTAGGAGAGGAGAGGTTCCGGGCCTTTTGAAGGAAATGAGCGAGTATGGGTGCGAGCCAAATACTGTGACTTACAATGCAATGATTCATGGGTATTGTAAGGAGAAGGATTTCGAGGCAGCGTACAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAGACCAGATGCTATTAGTTACAATGTGATTATTGATGCATTGTGCAAAGGAGGGAAATGGAGCGAGGCCAATCTGTTCTTTCAAGATTTACCAAGGCGCGGGTGCCATCCGGATGTTCTTTCATATCGAATGCTATTTAGTGGACTTTGTGATTGCGGACAGTTTAAGGAAGCAGCATTTGTCTTAGATGAGATGATCTTTAAGGGTTGTGCGCCCCATTATGCACGGACGCATAAACTTGTTGAGGGTTTGTGTCAGGAAGGTAATATGGAGTTGTTAGGGACAGTTTTAAGTAGCCTGGAAAAGGCAAATGTTCTTCATGGAGATACCTGGAGGATGGTCATTTCTACGCTATGTAAGGAGAAGCCGTCAGATGTGTCTGAGCTCATCGATACTTTGGCAATGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0016020 GO:0019898 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko04721 map04721

Pfam Domains

Protein Families

Sec1

Protein Analysis

461

Amino Acids

52.06

Weight (kDa)

7.78

Isoelectric Point (pI)

35.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	119 - 164	3.9e-09	PPR repeat family
PPR_1	PF12854	150 - 180	5.6e-10	PPR repeat
PPR_2	PF13041	151 - 199	4.8e-14	PPR repeat family
PPR	PF01535	155 - 184	2.4e-07	PPR repeat
PPR_long	PF17177	167 - 278	3e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	222 - 271	1.4e-09	PPR repeat family
PPR_3	PF13812	246 - 302	1.4e-11	Pentatricopeptide repeat domain
PPR_2	PF13041	258 - 303	9.5e-11	PPR repeat family
PPR_3	PF13812	281 - 339	1.5e-14	Pentatricopeptide repeat domain
PPR_1	PF12854	289 - 321	1.7e-13	PPR repeat
PPR_2	PF13041	292 - 341	7.2e-22	PPR repeat family
PPR	PF01535	295 - 325	1.2e-10	PPR repeat
PPR_1	PF12854	323 - 352	1.2e-07	PPR repeat
PPR_2	PF13041	327 - 376	1e-14	PPR repeat family
PPR	PF01535	330 - 360	7.4e-06	PPR repeat
PPR_1	PF12854	358 - 390	9.3e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12360 AT4G12120
fragaria_vesca	FvH4_2g27020 FvH4_2g27020 FvH4_2g27020 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g00770 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992 FvH4_5g29992
malus_domestica	MD04G1079000.v1.1 MD06G1073800.v1.1
prunus_persica	Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1 Prupe.5G080200_v2.0.a1
pyrus_communis	pycom04g07080 pycom06g05270
rosa_chinensis	RchiOBHm_Chr5g0038751 RchiOBHm_Chr6g0295901 RchiOBHm_Chr7g0201411
rosa_laevigata	RLG00000003677 RLG00000011758 RLG00000033865
rosa_multiflora	Rmu_sc0001469.1_g000008 Rmu_sc0005722.1_g000002
rosa_roxburghii	Rroxscaffold_1G00042410 Rroxscaffold_3G00255300 Rroxscaffold_7G00172070
rosa_rugosa	Rorug05G0173300.1 Rorug05G0173400 Rorug05G0173500 Rorug06G0255000 Rorug06G0255000 Rorug07G0063400 Rorug07G0063500
rosa_samantha	Rh5AG260700 Rh5BG264400 Rh5CG297100 Rh5DG272800 Rh6AG368700 Rh6BG376400 Rh6CG382600 Rh6DG369200 Rh7AG190300 Rh7BG192700 Rh7CG201800 Rh7DG195300
rosa_wichuraiana	Rw5G024070 Rw5G024360 Rw6G032150 Rw7G016710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	539
AccB1I	GGYRCC	1 cut(s)	1077
AccI	GTMKAC	1 cut(s)	976
AccII	CGCG	3 cut(s)	180, 648, 1074
AccIII	TCCGGA	1 cut(s)	1084
AciI	CCGC	6 cut(s)	178, 245, 349, 779, 1074, 1131
AcoI	YGGCCR	2 cut(s)	175, 283
AcsI	RAATTY	1 cut(s)	401
AcuI	CTGAAG	1 cut(s)	13
AfaI	GTAC	2 cut(s)	463, 941
AfiI	CCNNNNNNNGG	3 cut(s)	847, 1073, 1279
AflII	CTTAAG	1 cut(s)	737
AflIII	ACRYGT	1 cut(s)	646
AgsI	TTSAA	8 cut(s)	12, 108, 367, 391, 554, 631, 847, 1058
AjnI	CCWGG	2 cut(s)	1272, 1304
AjuI	GAANNNNNNNTTGG	8 cut(s)	114, 146, 407, 439, 605, 637, 752, 784
AluBI	AGCT	5 cut(s)	68, 172, 592, 620, 1360
AluI	AGCT	5 cut(s)	68, 172, 592, 620, 1360
Alw21I	GWGCWC	2 cut(s)	310, 1362
Alw26I	GTCTC	1 cut(s)	299
Alw44I	GTGCAC	1 cut(s)	306
Aor13HI	TCCGGA	1 cut(s)	1084
AoxI	GGCC	6 cut(s)	175, 283, 733, 813, 838, 1041
ApaLI	GTGCAC	1 cut(s)	306
ApeKI	GCWGC	4 cut(s)	540, 776, 935, 1148
ApoI	RAATTY	1 cut(s)	401
Asp700I	GAANNNNTTC	2 cut(s)	648, 926
AspLEI	GCGC	6 cut(s)	182, 385, 540, 805, 1074, 1189
AspS9I	GGNCC	3 cut(s)	61, 447, 838
AsuC2I	CCSGG	2 cut(s)	287, 837
AsuHPI	GGTGA	2 cut(s)	622, 725
AvaII	GGWCC	2 cut(s)	61, 447
BaeGI	GKGCMC	1 cut(s)	310
BanI	GGYRCC	1 cut(s)	1077
BanII	GRGCYC	2 cut(s)	292, 1362
BbsI	GAAGAC	1 cut(s)	542
Bbv12I	GWGCWC	2 cut(s)	310, 1362
BbvI	GCAGC	4 cut(s)	552, 788, 947, 1160
BccI	CCATC	5 cut(s)	26, 742, 952, 1089, 1306
BceAI	ACGGC	2 cut(s)	298, 1327
BciT130I	CCWGG	2 cut(s)	1274, 1306
BclI	TGATCA	2 cut(s)	477, 795
BcnI	CCSGG	2 cut(s)	287, 837
BcoDI	GTCTC	1 cut(s)	299
BfaI	CTAG	1 cut(s)	606
BfrI	CTTAAG	1 cut(s)	737
BisI	GCNGC	5 cut(s)	178, 541, 777, 936, 1149
BlsI	GCNGC	5 cut(s)	179, 542, 778, 937, 1150
Bme1390I	CCNGG	4 cut(s)	287, 837, 1274, 1306
Bme18I	GGWCC	2 cut(s)	61, 447
BmgT120I	GGNCC	3 cut(s)	61, 447, 838
BmiI	GGNNCC	5 cut(s)	63, 448, 449, 834, 1079
BmrFI	CCNGG	4 cut(s)	287, 837, 1274, 1306
BmsI	GCATC	5 cut(s)	60, 445, 763, 973, 1000
BpiI	GAAGAC	1 cut(s)	542
BpmI	CTGGAG	1 cut(s)	1327
Bpu10I	CCTNAGC	1 cut(s)	96
BpuMI	CCSGG	2 cut(s)	287, 837
Bsa29I	ATCGAT	1 cut(s)	1365
BsaJI	CCNNGG	1 cut(s)	1067
BsaWI	WCCGGW	1 cut(s)	1084
BsaXI	ACNNNNNCTCC	4 cut(s)	956, 986, 1328, 1358
Bsc4I	CCNNNNNNNGG	3 cut(s)	847, 1073, 1279
Bse118I	RCCGGY	1 cut(s)	815
Bse3DI	GCAATG	4 cut(s)	271, 371, 903, 1383
BseAI	TCCGGA	1 cut(s)	1084
BseBI	CCWGG	2 cut(s)	1274, 1306
BseCI	ATCGAT	1 cut(s)	1365
BseDI	CCNNGG	1 cut(s)	1067
BseGI	GGATG	7 cut(s)	51, 748, 778, 958, 1081, 1093, 1317
BseLI	CCNNNNNNNGG	3 cut(s)	847, 1073, 1279
BseMI	GCAATG	4 cut(s)	271, 371, 903, 1383
BseMII	CTCAG	1 cut(s)	1347
BseRI	GAGGAG	1 cut(s)	840
BseSI	GKGCMC	1 cut(s)	310
BseX3I	CGGCCG	2 cut(s)	175, 283
BseXI	GCAGC	4 cut(s)	552, 788, 947, 1160
BseYI	CCCAGC	1 cut(s)	64
Bsh1236I	CGCG	3 cut(s)	180, 648, 1074
Bsh1285I	CGRYCG	2 cut(s)	178, 286
BshFI	GGCC	6 cut(s)	177, 285, 735, 815, 840, 1043
BshNI	GGYRCC	1 cut(s)	1077
BshVI	ATCGAT	1 cut(s)	1365
BsiEI	CGRYCG	2 cut(s)	178, 286
BsiHKAI	GWGCWC	2 cut(s)	310, 1362
BsiSI	CCGG	4 cut(s)	286, 816, 836, 1085
BslFI	GGGAC	3 cut(s)	460, 589, 1270
BslI	CCNNNNNNNGG	3 cut(s)	847, 1073, 1279
BsmAI	GTCTC	1 cut(s)	299
BsmBI	CGTCTC	1 cut(s)	299
BsmFI	GGGAC	3 cut(s)	460, 589, 1270
BsmI	GAATGC	1 cut(s)	1110
BsnI	GGCC	6 cut(s)	177, 285, 735, 815, 840, 1043
Bsp1286I	GDGCHC	3 cut(s)	292, 310, 1362
Bsp13I	TCCGGA	1 cut(s)	1084
Bsp143I	GATC	3 cut(s)	477, 795, 1170
BspACI	CCGC	6 cut(s)	178, 245, 349, 779, 1074, 1131
BspANI	GGCC	6 cut(s)	177, 285, 735, 815, 840, 1043
BspCNI	CTCAG	1 cut(s)	1348
BspDI	ATCGAT	1 cut(s)	1365
BspEI	TCCGGA	1 cut(s)	1084
BspFNI	CGCG	3 cut(s)	180, 648, 1074
BspLI	GGNNCC	5 cut(s)	63, 448, 449, 834, 1079
BspT107I	GGYRCC	1 cut(s)	1077
BspTI	CTTAAG	1 cut(s)	737
BsrDI	GCAATG	4 cut(s)	271, 371, 903, 1383
BsrFI	RCCGGY	1 cut(s)	815
BssAI	RCCGGY	1 cut(s)	815
BssECI	CCNNGG	1 cut(s)	1067
BssMI	GATC	3 cut(s)	477, 795, 1170
BssT1I	CCWWGG	1 cut(s)	1067
Bst2UI	CCWGG	2 cut(s)	1274, 1306
Bst4CI	ACNGT	4 cut(s)	305, 883, 1137, 1261
Bst6I	CTCTTC	3 cut(s)	48, 89, 147
BstAFI	CTTAAG	1 cut(s)	737
BstC8I	GCNNGC	2 cut(s)	347, 872
BstDEI	CTNAG	3 cut(s)	96, 1159, 1356
BstENI	CCTNNNNNAGG	2 cut(s)	845, 1277
BstF5I	GGATG	7 cut(s)	51, 748, 778, 958, 1081, 1093, 1317
BstFNI	CGCG	3 cut(s)	180, 648, 1074
BstHHI	GCGC	6 cut(s)	182, 385, 540, 805, 1074, 1189
BstKTI	GATC	3 cut(s)	480, 798, 1173
BstMAI	GTCTC	1 cut(s)	299
BstMBI	GATC	3 cut(s)	477, 795, 1170
BstMCI	CGRYCG	2 cut(s)	178, 286
BstMWI	GCNNNNNNNGC	3 cut(s)	296, 305, 382
BstNI	CCWGG	2 cut(s)	1274, 1306
BstSCI	CCNGG	4 cut(s)	285, 835, 1272, 1304
BstSLI	GKGCMC	1 cut(s)	310
BstUI	CGCG	3 cut(s)	180, 648, 1074
BstV1I	GCAGC	4 cut(s)	552, 788, 947, 1160
BstV2I	GAAGAC	1 cut(s)	542
BstZI	CGGCCG	2 cut(s)	175, 283
Bsu15I	ATCGAT	1 cut(s)	1365
BsuRI	GGCC	6 cut(s)	177, 285, 735, 815, 840, 1043
BsuTUI	ATCGAT	1 cut(s)	1365
BtsCI	GGATG	7 cut(s)	51, 748, 778, 958, 1081, 1093, 1317
BtsIMutI	CAGTG	1 cut(s)	805
Cac8I	GCNNGC	2 cut(s)	347, 872
CfoI	GCGC	6 cut(s)	182, 385, 540, 805, 1074, 1189
Cfr10I	RCCGGY	1 cut(s)	815
Cfr13I	GGNCC	3 cut(s)	61, 447, 838
ClaI	ATCGAT	1 cut(s)	1365
CseI	GACGC	2 cut(s)	672, 1213
Csp6I	GTAC	2 cut(s)	462, 940
CviAII	CATG	4 cut(s)	271, 653, 905, 1295
CviQI	GTAC	2 cut(s)	462, 940
DdeI	CTNAG	3 cut(s)	96, 1159, 1356
DpnI	GATC	3 cut(s)	479, 797, 1172
DpnII	GATC	3 cut(s)	477, 795, 1170
EaeI	YGGCCR	2 cut(s)	175, 283
EagI	CGGCCG	2 cut(s)	175, 283
Eam1104I	CTCTTC	3 cut(s)	48, 89, 147
EarI	CTCTTC	3 cut(s)	48, 89, 147
EciI	GGCGGA	1 cut(s)	234
Ecl136II	GAGCTC	1 cut(s)	1360
EclXI	CGGCCG	2 cut(s)	175, 283
Eco130I	CCWWGG	1 cut(s)	1067
Eco24I	GRGCYC	2 cut(s)	292, 1362
Eco47I	GGWCC	2 cut(s)	61, 447
Eco52I	CGGCCG	2 cut(s)	175, 283
Eco53kI	GAGCTC	1 cut(s)	1360
Eco57I	CTGAAG	1 cut(s)	13
EcoICRI	GAGCTC	1 cut(s)	1360
EcoNI	CCTNNNNNAGG	2 cut(s)	845, 1277
EcoO109I	RGGNCCY	2 cut(s)	61, 447
EcoRII	CCWGG	2 cut(s)	1272, 1304
EcoT14I	CCWWGG	1 cut(s)	1067
EcoT22I	ATGCAT	1 cut(s)	1015
EcoT38I	GRGCYC	2 cut(s)	292, 1362
ErhI	CCWWGG	1 cut(s)	1067
Esp3I	CGTCTC	1 cut(s)	299
FaeI	CATG	4 cut(s)	274, 656, 908, 1298
FalI	AAGNNNNNCTT	2 cut(s)	407, 439
FaqI	GGGAC	3 cut(s)	460, 589, 1270
FatI	CATG	4 cut(s)	270, 652, 904, 1294
FauI	CCCGC	1 cut(s)	1067
FbaI	TGATCA	2 cut(s)	477, 795
FblI	GTMKAC	1 cut(s)	976
Fnu4HI	GCNGC	5 cut(s)	178, 541, 777, 936, 1149
FokI	GGATG	7 cut(s)	38, 755, 785, 965, 1068, 1100, 1324
FriOI	GRGCYC	2 cut(s)	292, 1362
Fsp4HI	GCNGC	5 cut(s)	178, 541, 777, 936, 1149
FspBI	CTAG	1 cut(s)	606
FspI	TGCGCA	1 cut(s)	539
GlaI	GCGC	6 cut(s)	181, 384, 539, 804, 1073, 1188
GluI	GCNGC	5 cut(s)	178, 541, 777, 936, 1149
GsaI	CCCAGC	1 cut(s)	68
GsuI	CTGGAG	1 cut(s)	1327
HaeIII	GGCC	6 cut(s)	177, 285, 735, 815, 840, 1043
HapII	CCGG	4 cut(s)	286, 816, 836, 1085
HgaI	GACGC	2 cut(s)	672, 1213
HhaI	GCGC	6 cut(s)	182, 385, 540, 805, 1074, 1189
Hin1II	CATG	4 cut(s)	274, 656, 908, 1298
Hin6I	GCGC	6 cut(s)	180, 383, 538, 803, 1072, 1187
HinP1I	GCGC	6 cut(s)	180, 383, 538, 803, 1072, 1187
HindIII	AAGCTT	2 cut(s)	590, 618
HinfI	GANTC	3 cut(s)	104, 602, 901
HpaII	CCGG	4 cut(s)	286, 816, 836, 1085
HphI	GGTGA	2 cut(s)	622, 725
Hpy166II	GTNNAC	5 cut(s)	308, 462, 586, 977, 1118
Hpy188I	TCNGA	3 cut(s)	601, 1348, 1357
Hpy188III	TCNNGA	3 cut(s)	1058, 1085, 1232
Hpy8I	GTNNAC	5 cut(s)	308, 462, 586, 977, 1118
Hpy99I	CGWCG	1 cut(s)	688
HpyAV	CCTTC	7 cut(s)	37, 342, 412, 514, 841, 916, 1229
HpyCH4III	ACNGT	4 cut(s)	305, 883, 1137, 1261
HpyCH4V	TGCA	9 cut(s)	264, 308, 515, 776, 896, 1013, 1020, 1199, 1381
HpyF10VI	GCNNNNNNNGC	3 cut(s)	296, 305, 382
HpyF3I	CTNAG	3 cut(s)	96, 1159, 1356
Hsp92II	CATG	4 cut(s)	274, 656, 908, 1298
HspAI	GCGC	6 cut(s)	180, 383, 538, 803, 1072, 1187
KflI	GGGWCCC	1 cut(s)	447
Kpn2I	TCCGGA	1 cut(s)	1084
Ksp22I	TGATCA	2 cut(s)	477, 795
Kzo9I	GATC	3 cut(s)	477, 795, 1170
LmnI	GCTCC	3 cut(s)	202, 247, 1035
Lsp1109I	GCAGC	4 cut(s)	552, 788, 947, 1160
LweI	GCATC	5 cut(s)	60, 445, 763, 973, 1000
MaeI	CTAG	1 cut(s)	606
MaeIII	GTNAC	3 cut(s)	565, 883, 992
MalI	GATC	3 cut(s)	479, 797, 1172
MboI	GATC	3 cut(s)	477, 795, 1170
MboII	GAAGA	9 cut(s)	35, 76, 134, 250, 421, 427, 542, 769, 1283
MfeI	CAATTG	1 cut(s)	197
MhlI	GDGCHC	3 cut(s)	292, 310, 1362
MluCI	AATT	3 cut(s)	197, 367, 401
MluI	ACGCGT	1 cut(s)	646
MmeI	TCCRAC	2 cut(s)	103, 750
Mph1103I	ATGCAT	1 cut(s)	1015
MroI	TCCGGA	1 cut(s)	1084
MroXI	GAANNNNTTC	2 cut(s)	648, 926
MseI	TTAA	4 cut(s)	738, 1140, 1176, 1265
MslI	CAYNNNNRTG	1 cut(s)	1086
MspA1I	CMGCKG	2 cut(s)	349, 779
MspCI	CTTAAG	1 cut(s)	737
MspI	CCGG	4 cut(s)	286, 816, 836, 1085
MspR9I	CCNGG	4 cut(s)	287, 837, 1274, 1306
MunI	CAATTG	1 cut(s)	197
Mva1269I	GAATGC	1 cut(s)	1110
MvaI	CCWGG	2 cut(s)	1274, 1306
MvnI	CGCG	3 cut(s)	180, 648, 1074
MwoI	GCNNNNNNNGC	3 cut(s)	296, 305, 382
NciI	CCSGG	2 cut(s)	287, 837
NdeII	GATC	3 cut(s)	477, 795, 1170
NlaIII	CATG	4 cut(s)	274, 656, 908, 1298
NlaIV	GGNNCC	5 cut(s)	63, 448, 449, 834, 1079
NmeAIII	GCCGAG	1 cut(s)	153
NmuCI	GTSAC	2 cut(s)	565, 883
NsbI	TGCGCA	1 cut(s)	539
NsiI	ATGCAT	1 cut(s)	1015
PctI	GAATGC	1 cut(s)	1110
PdmI	GAANNNNTTC	2 cut(s)	648, 926
PfeI	GAWTC	3 cut(s)	104, 602, 901
PkrI	GCNGC	5 cut(s)	179, 542, 778, 937, 1150
PpuMI	RGGWCCY	2 cut(s)	61, 447
Psp124BI	GAGCTC	1 cut(s)	1362
Psp5II	RGGWCCY	2 cut(s)	61, 447
Psp6I	CCWGG	2 cut(s)	1272, 1304
PspFI	CCCAGC	1 cut(s)	64
PspGI	CCWGG	2 cut(s)	1272, 1304
PspN4I	GGNNCC	5 cut(s)	63, 448, 449, 834, 1079
PspPI	GGNCC	3 cut(s)	61, 447, 838
PspPPI	RGGWCCY	2 cut(s)	61, 447
RsaI	GTAC	2 cut(s)	463, 941
RsaNI	GTAC	2 cut(s)	462, 940
RseI	CAYNNNNRTG	1 cut(s)	1086
SacI	GAGCTC	1 cut(s)	1362
SaqAI	TTAA	4 cut(s)	738, 1140, 1176, 1265
SatI	GCNGC	5 cut(s)	178, 541, 777, 936, 1149
Sau3AI	GATC	3 cut(s)	477, 795, 1170
Sau96I	GGNCC	3 cut(s)	61, 447, 838
ScrFI	CCNGG	4 cut(s)	287, 837, 1274, 1306
SduI	GDGCHC	3 cut(s)	292, 310, 1362
SfaNI	GCATC	5 cut(s)	60, 445, 763, 973, 1000
SinI	GGWCC	2 cut(s)	61, 447
SmiMI	CAYNNNNRTG	1 cut(s)	1086
SmlI	CTYRAG	1 cut(s)	737
SmoI	CTYRAG	1 cut(s)	737
Sse9I	AATT	3 cut(s)	197, 367, 401
SsiI	CCGC	6 cut(s)	178, 245, 349, 779, 1074, 1131
SspMI	CTAG	1 cut(s)	606
SstI	GAGCTC	1 cut(s)	1362
StyD4I	CCNGG	4 cut(s)	285, 835, 1272, 1304
StyI	CCWWGG	1 cut(s)	1067
TaaI	ACNGT	4 cut(s)	305, 883, 1137, 1261
TaqI	TCGA	5 cut(s)	192, 321, 930, 1102, 1365
TasI	AATT	3 cut(s)	197, 367, 401
TatI	WGTACW	1 cut(s)	461
TauI	GCSGC	1 cut(s)	180
TfiI	GAWTC	3 cut(s)	104, 602, 901
Tru1I	TTAA	4 cut(s)	738, 1140, 1176, 1265
Tru9I	TTAA	4 cut(s)	738, 1140, 1176, 1265
TscAI	CASTG	1 cut(s)	805
TseFI	GTSAC	2 cut(s)	565, 883
TseI	GCWGC	4 cut(s)	540, 776, 935, 1148
Tsp45I	GTSAC	2 cut(s)	565, 883
TspGWI	ACGGA	3 cut(s)	329, 532, 1216
TspRI	CASTG	1 cut(s)	805
Vha464I	CTTAAG	1 cut(s)	737
VneI	GTGCAC	1 cut(s)	306
VpaK11BI	GGWCC	2 cut(s)	61, 447
XagI	CCTNNNNNAGG	2 cut(s)	845, 1277
XapI	RAATTY	1 cut(s)	401
XmiI	GTMKAC	1 cut(s)	976
XmnI	GAANNNNTTC	2 cut(s)	648, 926
XspI	CTAG	1 cut(s)	606
Zsp2I	ATGCAT	1 cut(s)	1015

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.