Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Forward (+)

24662980 .. 24666673

Gene Structure 3694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g34010.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

ATGGCTTCCACACCTCTGGAAACCGACCTTGTTGTACCAAATCATCATGCCAAGAAAGAAGTTATCGACATTGACGATGAAGAAGACGATGAGTTGTCACCGATAGAGCAGGTTCGTCTAACAGTGTCAAACGACGACGACCCTTCCCTTCCGGTATGGACTTTTCGCATGTGGTCCATCGGACTCTTATCGTGCGTCCTCCTCTCCTTTGTCAACACCTTCTTCTCCTACCGAACCGAGCCCCTCGTCATTTCCATGATCACCATCCAGGTGGCGAGTCTCCCTATCGGAAAGTTCATGGCGAGGACACTGCCCACAAGGAAGTTTCGAATCGGCTCGAAAGAGTTTTCCCTTAACCCTGGCGAGTTTAACATCAAAGAGCATGTTTTGATATCCATTTTTGCAAATACTGGAGCAGGGTTTGGCAGCGGTCCGGCGTATGCAATTGGGATTGTGACTATTGTAAAGGCGTTTTATGGGAGAAGGATATCTTTCTTGGCGAGTTGGATACTTGTAATTACCACGCAGGTTTTAGGTTATGGATGGGCCGGTATTCTCCGGAAGTACGTGGTGGATCCGGCGACGATGTGGTGGCCTAGTAGTCTCGTTCAGGTCTCTTTGTTTAGGGCTCTACACGAGAAAGACAACAACCGGATGTCAAGAGGAAAATTCTTTCTGATTGCGCTGGTATGCAGCTTTTCTTTTTATATTGTCCCAGGCTACCTGTTCATGACTATAGGAACGATTTCATGGATCTGCTGGCTTTACCCCAAGTCGATAACAGCACAACAAATCGGGTCGGGCATGCGCGGACTTGGTATAGGTTCCCTTACCTTAGACTGGTCTGTCATAGCCTCGTATCTAGGCAGCCCTCTGATCAGTCCATTCTTTGCCATTGTTAATATCACTGTTGGCTTTATGCTCATCATGTATGTGGTATTACCAACTGCCTATTGGGGATTCAACTTGTACAATGCCAAAAACTTCGCGATTTTCTCTAAAAACTTGTTTGATGACAATGGCCAAATATATAATGTCACGGCCATCGTCAACGACAAGTTCGAAATCGACATGCCTGCCTATAAACAACAAGGACATGTAAACCTCAGTGTGTTCTTTTCTCTGACCTACGGGATTGGTTTCGCTGGTGTTATATCGACCATCACACATGTGGTTCTATTCCATGGAAGGGAGATGTATGAGAAATACAAAGCTGCACACTCTGGAAAGGTGGACATACACACCCGATTGATGAGAAATTACAGGGACATACCTACTTGGTGGTTTCATATTCTGCTTTTGTTGTCGCTTGCACTCTCTCTTGGATTATGCATTTTCATGAAAGATGAGACACCAGGACTAAACGTAATCACAGAGTATATAATGGGATTGATATTACCTGGAAAACCAATAGCCAATGTATGCTTCAAAACCTATGGGTATATAAGCATGGCGCAAGCAATTTCCTTTCTGAGTGATTTCAAGTTAGGTCATTACATGAAGATCCCACCCATATCGATGTTCATAGTTCAGTGTATAGGAACCATAATATCCGGAACAGTCAATATTGGGACGGCATGGTGGCTGCTAACTACTGTGGAAAACATATGTCGAGAAGATTTACTCCCTGCTGGAAGTCCTTGGACTTGTGCCAGTGACGGTGTGTTCTTTGATGCCTCTGTAATTTGGGGTCTGGTCGGGCCAAAACGAATCTTCGGCTCACTTGGATACTACTCAGCACTCAACTGGTTTTTCCTTTTCGGCGCAATTGGACCTCTCATAGTATGGATGTTGCATAAAGCTTTTCCGACTCAAAGATGGATCGCACTGATCAACCTTCCGGTGCTTCTCGGAGCAACGGCCGTAATGCCACCGGCTACGACTGTGAACTTCAACTGCTGGATTATTGTTGGAGTTGTTTTCAATTACTATGTCTTCAGATACAGAAAGAAATGGTGGCAAAGGTACAATTATGTTCTTTCGGCTGCGTTAGATGCTGGAGTAGCGTTCATGACGGTGCTTATATATCTATCATTATCAATGAATAATAAGGGCATATCTTGGTGGGGAAATGATGGGGAACACTGTGATTTGGCTACCTGTCCAACAGCTGAAGGTTTAGATCTTGGTCATGCTTGTGTATGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

716

Amino Acids

80.23

Weight (kDa)

8.3

Isoelectric Point (pI)

27.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	52 - 452	3e-102	OPT oligopeptide transporter protein
OPT	PF03169	452 - 678	2.7e-63	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	845
Acc36I	ACCTGC	2 cut(s)	100, 517
AccII	CGCG	2 cut(s)	810, 989
AccIII	TCCGGA	2 cut(s)	558, 1553
AciI	CCGC	2 cut(s)	429, 810
AclWI	GGATC	5 cut(s)	569, 582, 761, 1498, 1829
AcoI	YGGCCR	3 cut(s)	1021, 1041, 1860
AcsI	RAATTY	1 cut(s)	668
AcuI	CTGAAG	2 cut(s)	1921, 2133
AfaI	GTAC	4 cut(s)	36, 566, 971, 1967
AfiI	CCNNNNNNNGG	2 cut(s)	840, 1189
AflIII	ACRYGT	2 cut(s)	1096, 1168
AgsI	TTSAA	5 cut(s)	964, 1429, 1483, 1894, 1924
AjnI	CCWGG	5 cut(s)	267, 358, 715, 1354, 1399
AjuI	GAANNNNNNNTTGG	2 cut(s)	1409, 1441
AleI	CACNNNNGTG	1 cut(s)	1169
AluBI	AGCT	4 cut(s)	696, 1214, 1802, 2111
AluI	AGCT	4 cut(s)	696, 1214, 1802, 2111
Alw26I	GTCTC	4 cut(s)	284, 608, 619, 1343
AlwI	GGATC	5 cut(s)	569, 582, 761, 1498, 1829
Aor13HI	TCCGGA	2 cut(s)	558, 1553
AoxI	GGCC	6 cut(s)	546, 593, 1021, 1041, 1700, 1860
ApeKI	GCWGC	6 cut(s)	426, 693, 867, 1214, 1585, 1985
ApoI	RAATTY	1 cut(s)	668
Asp700I	GAANNNNTTC	1 cut(s)	745
AspLEI	GCGC	4 cut(s)	685, 810, 1456, 1766
AspS9I	GGNCC	5 cut(s)	174, 431, 546, 1700, 1772
AsuHPI	GGTGA	2 cut(s)	90, 253
AsuII	TTCGAA	2 cut(s)	328, 1062
AvaII	GGWCC	3 cut(s)	174, 431, 1772
BalI	TGGCCA	1 cut(s)	1023
BamHI	GGATCC	1 cut(s)	574
BanII	GRGCYC	2 cut(s)	243, 631
BauI	CACGAG	1 cut(s)	635
BbsI	GAAGAC	2 cut(s)	90, 1927
BbvI	GCAGC	6 cut(s)	438, 705, 879, 1201, 1572, 1972
BccI	CCATC	7 cut(s)	185, 272, 537, 1052, 1169, 1812, 2069
BceAI	ACGGC	4 cut(s)	1056, 1590, 1847, 1875
BcgI	CGANNNNNNTGC	4 cut(s)	292, 326, 1058, 1092
BciT130I	CCWGG	5 cut(s)	269, 360, 717, 1356, 1401
BciVI	GTATCC	2 cut(s)	501, 1721
BclI	TGATCA	3 cut(s)	258, 876, 1830
BcoDI	GTCTC	4 cut(s)	284, 608, 619, 1343
BfaI	CTAG	2 cut(s)	597, 863
BfmI	CTRYAG	1 cut(s)	735
BfuAI	ACCTGC	2 cut(s)	100, 517
BfuI	GTATCC	2 cut(s)	501, 1721
BglII	AGATCT	1 cut(s)	2122
BisI	GCNGC	6 cut(s)	427, 694, 868, 1215, 1586, 1986
BlsI	GCNGC	6 cut(s)	428, 695, 869, 1216, 1587, 1987
Bme1390I	CCNGG	5 cut(s)	269, 360, 717, 1356, 1401
Bme18I	GGWCC	3 cut(s)	174, 431, 1772
BmgT120I	GGNCC	5 cut(s)	174, 431, 546, 1700, 1772
BmiI	GGNNCC	3 cut(s)	576, 826, 1543
BmrFI	CCNGG	5 cut(s)	269, 360, 717, 1356, 1401
BmsI	GCATC	2 cut(s)	1663, 1984
BpiI	GAAGAC	2 cut(s)	90, 1927
BpmI	CTGGAG	2 cut(s)	432, 2019
Bpu14I	TTCGAA	2 cut(s)	328, 1062
Bsa29I	ATCGAT	1 cut(s)	1517
BsaAI	YACGTR	1 cut(s)	568
BsaBI	GATNNNNATC	1 cut(s)	263
BsaI	GGTCTC	1 cut(s)	619
BsaJI	CCNNGG	4 cut(s)	358, 715, 1183, 1640
BsaWI	WCCGGW	5 cut(s)	151, 558, 651, 1553, 1840
Bsc4I	CCNNNNNNNGG	2 cut(s)	840, 1189
Bse118I	RCCGGY	2 cut(s)	548, 1873
Bse1I	ACTGG	4 cut(s)	415, 845, 1653, 1751
Bse8I	GATNNNNATC	1 cut(s)	263
BseAI	TCCGGA	2 cut(s)	558, 1553
BseBI	CCWGG	5 cut(s)	269, 360, 717, 1356, 1401
BseCI	ATCGAT	1 cut(s)	1517
BseDI	CCNNGG	4 cut(s)	358, 715, 1183, 1640
BseGI	GGATG	4 cut(s)	264, 548, 660, 1794
BseJI	GATNNNNATC	1 cut(s)	263
BseLI	CCNNNNNNNGG	2 cut(s)	840, 1189
BseMII	CTCAG	3 cut(s)	1120, 1463, 1749
BseNI	ACTGG	4 cut(s)	415, 845, 1653, 1751
BseRI	GAGGAG	1 cut(s)	191
BseX3I	CGGCCG	1 cut(s)	1860
BseXI	GCAGC	6 cut(s)	438, 705, 879, 1201, 1572, 1972
BsgI	GTGCAG	1 cut(s)	1200
Bsh1236I	CGCG	2 cut(s)	810, 989
Bsh1285I	CGRYCG	1 cut(s)	1863
BshFI	GGCC	6 cut(s)	548, 595, 1023, 1043, 1702, 1862
BshVI	ATCGAT	1 cut(s)	1517
BsiEI	CGRYCG	1 cut(s)	1863
BsiSI	CCGG	9 cut(s)	152, 434, 549, 559, 578, 652, 1554, 1841, 1874
BslFI	GGGAC	3 cut(s)	698, 1280, 1585
BslI	CCNNNNNNNGG	2 cut(s)	840, 1189
BsmAI	GTCTC	4 cut(s)	284, 608, 619, 1343
BsmFI	GGGAC	3 cut(s)	698, 1280, 1585
BsnI	GGCC	6 cut(s)	548, 595, 1023, 1043, 1702, 1862
Bso31I	GGTCTC	1 cut(s)	619
Bsp119I	TTCGAA	2 cut(s)	328, 1062
Bsp1286I	GDGCHC	2 cut(s)	243, 631
Bsp13I	TCCGGA	2 cut(s)	558, 1553
Bsp1407I	TGTACA	1 cut(s)	969
Bsp143I	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
Bsp19I	CCATGG	1 cut(s)	1183
Bsp68I	TCGCGA	1 cut(s)	989
BspACI	CCGC	2 cut(s)	429, 810
BspANI	GGCC	6 cut(s)	548, 595, 1023, 1043, 1702, 1862
BspCNI	CTCAG	3 cut(s)	1119, 1464, 1748
BspDI	ATCGAT	1 cut(s)	1517
BspEI	TCCGGA	2 cut(s)	558, 1553
BspFNI	CGCG	2 cut(s)	810, 989
BspHI	TCATGA	3 cut(s)	729, 1338, 2010
BspLI	GGNNCC	3 cut(s)	576, 826, 1543
BspMI	ACCTGC	2 cut(s)	100, 517
BspPI	GGATC	5 cut(s)	569, 582, 761, 1498, 1829
BspT104I	TTCGAA	2 cut(s)	328, 1062
BspTNI	GGTCTC	1 cut(s)	619
BsrFI	RCCGGY	2 cut(s)	548, 1873
BsrGI	TGTACA	1 cut(s)	969
BsrI	ACTGG	4 cut(s)	415, 845, 1653, 1751
BssAI	RCCGGY	2 cut(s)	548, 1873
BssECI	CCNNGG	4 cut(s)	358, 715, 1183, 1640
BssMI	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
BssSI	CACGAG	1 cut(s)	635
BssT1I	CCWWGG	2 cut(s)	1183, 1640
Bst2BI	CACGAG	1 cut(s)	635
Bst2UI	CCWGG	5 cut(s)	269, 360, 717, 1356, 1401
Bst4CI	ACNGT	8 cut(s)	124, 910, 1561, 1597, 1661, 1885, 2017, 2087
BstAUI	TGTACA	1 cut(s)	969
BstBAI	YACGTR	1 cut(s)	568
BstBI	TTCGAA	2 cut(s)	328, 1062
BstC8I	GCNNGC	5 cut(s)	761, 806, 1077, 1311, 1458
BstDEI	CTNAG	4 cut(s)	835, 1106, 1472, 1735
BstDSI	CCRYGG	1 cut(s)	1183
BstF5I	GGATG	4 cut(s)	264, 548, 660, 1794
BstFNI	CGCG	2 cut(s)	810, 989
BstHHI	GCGC	4 cut(s)	685, 810, 1456, 1766
BstKTI	GATC	8 cut(s)	261, 577, 756, 879, 1506, 1824, 1833, 2125
BstMAI	GTCTC	4 cut(s)	284, 608, 619, 1343
BstMBI	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
BstMCI	CGRYCG	1 cut(s)	1863
BstMWI	GCNNNNNNNGC	2 cut(s)	1994, 2003
BstNI	CCWGG	5 cut(s)	269, 360, 717, 1356, 1401
BstNSI	RCATGY	6 cut(s)	172, 386, 808, 1075, 1100, 1172
BstSCI	CCNGG	5 cut(s)	267, 358, 715, 1354, 1399
BstSFI	CTRYAG	1 cut(s)	735
BstUI	CGCG	2 cut(s)	810, 989
BstV1I	GCAGC	6 cut(s)	438, 705, 879, 1201, 1572, 1972
BstV2I	GAAGAC	2 cut(s)	90, 1927
BstX2I	RGATCY	4 cut(s)	574, 753, 1503, 2122
BstXI	CCANNNNNNTGG	2 cut(s)	16, 271
BstYI	RGATCY	4 cut(s)	574, 753, 1503, 2122
BstZI	CGGCCG	1 cut(s)	1860
Bsu15I	ATCGAT	1 cut(s)	1517
BsuI	GTATCC	2 cut(s)	501, 1721
BsuRI	GGCC	6 cut(s)	548, 595, 1023, 1043, 1702, 1862
BsuTUI	ATCGAT	1 cut(s)	1517
BtgI	CCRYGG	1 cut(s)	1183
BtsCI	GGATG	4 cut(s)	264, 548, 660, 1794
BtsI	GCAGTG	1 cut(s)	308
BtsIMutI	CAGTG	8 cut(s)	129, 308, 906, 1114, 1538, 1660, 1826, 2083
BtuMI	TCGCGA	1 cut(s)	989
BveI	ACCTGC	2 cut(s)	100, 517
Cac8I	GCNNGC	5 cut(s)	761, 806, 1077, 1311, 1458
CciI	TCATGA	3 cut(s)	729, 1338, 2010
CfoI	GCGC	4 cut(s)	685, 810, 1456, 1766
Cfr10I	RCCGGY	2 cut(s)	548, 1873
Cfr13I	GGNCC	5 cut(s)	174, 431, 546, 1700, 1772
ClaI	ATCGAT	1 cut(s)	1517
CpoI	CGGWCCG	1 cut(s)	431
CseI	GACGC	1 cut(s)	184
Csp6I	GTAC	4 cut(s)	35, 565, 970, 1966
CspI	CGGWCCG	1 cut(s)	431
CviQI	GTAC	4 cut(s)	35, 565, 970, 1966
DdeI	CTNAG	4 cut(s)	835, 1106, 1472, 1735
DpnI	GATC	8 cut(s)	260, 576, 755, 878, 1505, 1823, 1832, 2124
DpnII	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
DrdI	GACNNNNNNGTC	1 cut(s)	845
DseDI	GACNNNNNNGTC	1 cut(s)	845
EaeI	YGGCCR	3 cut(s)	1021, 1041, 1860
EagI	CGGCCG	1 cut(s)	1860
EclXI	CGGCCG	1 cut(s)	1860
Eco130I	CCWWGG	2 cut(s)	1183, 1640
Eco24I	GRGCYC	2 cut(s)	243, 631
Eco31I	GGTCTC	1 cut(s)	619
Eco32I	GATATC	2 cut(s)	393, 489
Eco47I	GGWCC	3 cut(s)	174, 431, 1772
Eco52I	CGGCCG	1 cut(s)	1860
Eco57I	CTGAAG	2 cut(s)	1921, 2133
EcoRII	CCWGG	5 cut(s)	267, 358, 715, 1354, 1399
EcoRV	GATATC	2 cut(s)	393, 489
EcoT14I	CCWWGG	2 cut(s)	1183, 1640
EcoT22I	ATGCAT	1 cut(s)	1334
EcoT38I	GRGCYC	2 cut(s)	243, 631
ErhI	CCWWGG	2 cut(s)	1183, 1640
FalI	AAGNNNNNCTT	2 cut(s)	475, 507
FaqI	GGGAC	3 cut(s)	698, 1280, 1585
FauNDI	CATATG	1 cut(s)	1607
FbaI	TGATCA	3 cut(s)	258, 876, 1830
Fnu4HI	GCNGC	6 cut(s)	427, 694, 868, 1215, 1586, 1986
FokI	GGATG	4 cut(s)	251, 555, 667, 1801
FriOI	GRGCYC	2 cut(s)	243, 631
Fsp4HI	GCNGC	6 cut(s)	427, 694, 868, 1215, 1586, 1986
FspBI	CTAG	2 cut(s)	597, 863
GlaI	GCGC	4 cut(s)	684, 809, 1455, 1765
GluI	GCNGC	6 cut(s)	427, 694, 868, 1215, 1586, 1986
GsuI	CTGGAG	2 cut(s)	432, 2019
HaeIII	GGCC	6 cut(s)	548, 595, 1023, 1043, 1702, 1862
HapII	CCGG	9 cut(s)	152, 434, 549, 559, 578, 652, 1554, 1841, 1874
HgaI	GACGC	1 cut(s)	184
HhaI	GCGC	4 cut(s)	685, 810, 1456, 1766
Hin6I	GCGC	4 cut(s)	683, 808, 1454, 1764
HinP1I	GCGC	4 cut(s)	683, 808, 1454, 1764
HincII	GTYRAC	2 cut(s)	214, 1051
HindII	GTYRAC	2 cut(s)	214, 1051
HindIII	AAGCTT	1 cut(s)	1800
HinfI	GANTC	6 cut(s)	183, 277, 330, 960, 1710, 1810
HpaII	CCGG	9 cut(s)	152, 434, 549, 559, 578, 652, 1554, 1841, 1874
HphI	GGTGA	2 cut(s)	90, 253
Hpy166II	GTNNAC	5 cut(s)	214, 1051, 1102, 1234, 1888
Hpy188I	TCNGA	9 cut(s)	182, 290, 678, 876, 1125, 1473, 1809, 1853, 1940
Hpy8I	GTNNAC	5 cut(s)	214, 1051, 1102, 1234, 1888
Hpy99I	CGWCG	3 cut(s)	137, 140, 586
HpyAV	CCTTC	7 cut(s)	153, 158, 229, 477, 1182, 1847, 2108
HpyCH4III	ACNGT	8 cut(s)	124, 910, 1561, 1597, 1661, 1885, 2017, 2087
HpyCH4IV	ACGT	2 cut(s)	567, 1365
HpyCH4V	TGCA	7 cut(s)	404, 443, 693, 1217, 1313, 1332, 1795
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1994, 2003
HpyF3I	CTNAG	4 cut(s)	835, 1106, 1472, 1735
HpySE526I	ACGT	2 cut(s)	567, 1365
HspAI	GCGC	4 cut(s)	683, 808, 1454, 1764
Kpn2I	TCCGGA	2 cut(s)	558, 1553
Ksp22I	TGATCA	3 cut(s)	258, 876, 1830
Kzo9I	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
LmnI	GCTCC	2 cut(s)	413, 1853
Lsp1109I	GCAGC	6 cut(s)	438, 705, 879, 1201, 1572, 1972
LweI	GCATC	2 cut(s)	1663, 1984
MaeI	CTAG	2 cut(s)	597, 863
MaeII	ACGT	2 cut(s)	567, 1365
MaeIII	GTNAC	4 cut(s)	96, 454, 1036, 1655
MalI	GATC	8 cut(s)	260, 576, 755, 878, 1505, 1823, 1832, 2124
MboI	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
MboII	GAAGA	7 cut(s)	92, 95, 214, 1513, 1628, 1705, 1927
MfeI	CAATTG	2 cut(s)	444, 1767
MflI	RGATCY	4 cut(s)	574, 753, 1503, 2122
MhlI	GDGCHC	2 cut(s)	243, 631
MlsI	TGGCCA	1 cut(s)	1023
MluCI	AATT	9 cut(s)	444, 516, 668, 1258, 1461, 1683, 1767, 1924, 1969
MluNI	TGGCCA	1 cut(s)	1023
MlyI	GAGTC	3 cut(s)	177, 286, 1804
MmeI	TCCRAC	4 cut(s)	485, 1832, 1891, 2129
Mox20I	TGGCCA	1 cut(s)	1023
Mph1103I	ATGCAT	1 cut(s)	1334
MroI	TCCGGA	2 cut(s)	558, 1553
MroXI	GAANNNNTTC	1 cut(s)	745
MscI	TGGCCA	1 cut(s)	1023
MseI	TTAA	3 cut(s)	354, 369, 900
MslI	CAYNNNNRTG	8 cut(s)	254, 269, 932, 1169, 1337, 1517, 2015, 2136
Msp20I	TGGCCA	1 cut(s)	1023
MspA1I	CMGCKG	2 cut(s)	429, 2111
MspI	CCGG	9 cut(s)	152, 434, 549, 559, 578, 652, 1554, 1841, 1874
MspR9I	CCNGG	5 cut(s)	269, 360, 717, 1356, 1401
MunI	CAATTG	2 cut(s)	444, 1767
MvaI	CCWGG	5 cut(s)	269, 360, 717, 1356, 1401
MvnI	CGCG	2 cut(s)	810, 989
MwoI	GCNNNNNNNGC	2 cut(s)	1994, 2003
NcoI	CCATGG	1 cut(s)	1183
NdeI	CATATG	1 cut(s)	1607
NdeII	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
NlaIV	GGNNCC	3 cut(s)	576, 826, 1543
NmuCI	GTSAC	4 cut(s)	96, 454, 1036, 1655
NruI	TCGCGA	1 cut(s)	989
NsiI	ATGCAT	1 cut(s)	1334
NspI	RCATGY	6 cut(s)	172, 386, 808, 1075, 1100, 1172
NspV	TTCGAA	2 cut(s)	328, 1062
OliI	CACNNNNGTG	1 cut(s)	1169
PaeI	GCATGC	1 cut(s)	808
PagI	TCATGA	3 cut(s)	729, 1338, 2010
PciI	ACATGT	2 cut(s)	1096, 1168
PcsI	WCGNNNNNNNCGW	2 cut(s)	72, 1059
PdmI	GAANNNNTTC	1 cut(s)	745
PfeI	GAWTC	3 cut(s)	330, 960, 1710
PkrI	GCNGC	6 cut(s)	428, 695, 869, 1216, 1587, 1987
PleI	GAGTC	3 cut(s)	177, 285, 1804
PpsI	GAGTC	3 cut(s)	177, 285, 1804
Ppu21I	YACGTR	1 cut(s)	568
PscI	ACATGT	2 cut(s)	1096, 1168
Psp6I	CCWGG	5 cut(s)	267, 358, 715, 1354, 1399
PspGI	CCWGG	5 cut(s)	267, 358, 715, 1354, 1399
PspN4I	GGNNCC	3 cut(s)	576, 826, 1543
PspPI	GGNCC	5 cut(s)	174, 431, 546, 1700, 1772
PsuI	RGATCY	4 cut(s)	574, 753, 1503, 2122
PvuII	CAGCTG	1 cut(s)	2111
RruI	TCGCGA	1 cut(s)	989
RsaI	GTAC	4 cut(s)	36, 566, 971, 1967
RsaNI	GTAC	4 cut(s)	35, 565, 970, 1966
RseI	CAYNNNNRTG	8 cut(s)	254, 269, 932, 1169, 1337, 1517, 2015, 2136
Rsr2I	CGGWCCG	1 cut(s)	431
RsrII	CGGWCCG	1 cut(s)	431
SaqAI	TTAA	3 cut(s)	354, 369, 900
SatI	GCNGC	6 cut(s)	427, 694, 868, 1215, 1586, 1986
Sau3AI	GATC	8 cut(s)	258, 574, 753, 876, 1503, 1821, 1830, 2122
Sau96I	GGNCC	5 cut(s)	174, 431, 546, 1700, 1772
SchI	GAGTC	3 cut(s)	177, 286, 1804
ScrFI	CCNGG	5 cut(s)	269, 360, 717, 1356, 1401
SduI	GDGCHC	2 cut(s)	243, 631
SfaNI	GCATC	2 cut(s)	1663, 1984
SfcI	CTRYAG	1 cut(s)	735
SfuI	TTCGAA	2 cut(s)	328, 1062
SinI	GGWCC	3 cut(s)	174, 431, 1772
SmiMI	CAYNNNNRTG	8 cut(s)	254, 269, 932, 1169, 1337, 1517, 2015, 2136
SphI	GCATGC	1 cut(s)	808
Sse9I	AATT	9 cut(s)	444, 516, 668, 1258, 1461, 1683, 1767, 1924, 1969
SsiI	CCGC	2 cut(s)	429, 810
SspI	AATATT	1 cut(s)	1567
SspMI	CTAG	2 cut(s)	597, 863
StyD4I	CCNGG	5 cut(s)	267, 358, 715, 1354, 1399
StyI	CCWWGG	2 cut(s)	1183, 1640
TaaI	ACNGT	8 cut(s)	124, 910, 1561, 1597, 1661, 1885, 2017, 2087
TaiI	ACGT	2 cut(s)	570, 1368
TaqI	TCGA	9 cut(s)	66, 328, 338, 776, 1062, 1068, 1157, 1517, 1612
TasI	AATT	9 cut(s)	444, 516, 668, 1258, 1461, 1683, 1767, 1924, 1969
TatI	WGTACW	1 cut(s)	969
TfiI	GAWTC	3 cut(s)	330, 960, 1710
Tru1I	TTAA	3 cut(s)	354, 369, 900
Tru9I	TTAA	3 cut(s)	354, 369, 900
TscAI	CASTG	8 cut(s)	129, 315, 913, 1114, 1538, 1660, 1833, 2090
TseFI	GTSAC	4 cut(s)	96, 454, 1036, 1655
TseI	GCWGC	6 cut(s)	426, 693, 867, 1214, 1585, 1985
Tsp45I	GTSAC	4 cut(s)	96, 454, 1036, 1655
TspRI	CASTG	8 cut(s)	129, 315, 913, 1114, 1538, 1660, 1833, 2090
VpaK11BI	GGWCC	3 cut(s)	174, 431, 1772
XapI	RAATTY	1 cut(s)	668
XceI	RCATGY	6 cut(s)	172, 386, 808, 1075, 1100, 1172
XcmI	CCANNNNNNNNNTGG	2 cut(s)	951, 1168
XmnI	GAANNNNTTC	1 cut(s)	745
XspI	CTAG	2 cut(s)	597, 863
Zsp2I	ATGCAT	1 cut(s)	1334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.