Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0003716

Physical Location & Seq

Genomic Coordinates Reverse (-)

44069509 .. 44073686

Gene Structure 4178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G539200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

GACGACGACGTTTCACCTGTCGAGGAAGTTCGCTTGACGGTCTCGAACGACGACGACCCGACCCTTCCAGTATGGACCTTCCGGATGTGGGCCCTGGGCCTCCTCTCATGCGTCCTCCTCTCCTTCCTCAACACCTTCTTCGCCTACCGCACGGAGCCGCTCGTCATTTCGATGATCTCCGTACAGGTGGCGACGCTCCCGATTGGACGGTTCATGGCGAGGACGCTGCCTACAAAGAAGTTTCGGGTCGGGTTGAGGGAGTTTTCTCTCAACCCGGGTCCGTTTAACATGAAGGAGCACGTGCTGATATCCATATTCGCGAATGCAGGAGCCGGGTTCGGAAGCGGGGCGGCTTATGCAATTAGTATTGTGAACATAATAAAAGCGTTTTATCATAGGAATATCTCATTTTGGGCCAGTTGGATACTTGTTATTACCACGCAGGTGTTAGGATACGGGTGGGCAGGAATTTTGCGAAAGTACGTGGTGGATCCGGCTGAGATGTGGTGGCCGAGTAGTCTTGTTCAAGTCTCTTTATTTAGGGCTCTGCATGAGAAAGACAGCAAGCGAATGTCAAGAGGGAAGTTCTTTCTGATTGCCCTCATCTGCAGCTTCTCCTGGTTCGTCGTCCCAGGCTACCTCTTCCCAACTCTGTCAACAATTTCATGGGTTTGCTGGGTGTACCCAAACTCAGTCACGGCCCAACAAATCGGGTCGGGCATGCGCGGGCTGGGCCTCGGGGCATTTTCACTTGATTGGACCGTTATAGCCTCTTACCTTGGCAGCCCTCTGATCAGCCCCTTCTTTGCCATTGTCAATGTTGCAGCTGGCTATCTTCTGGTTATGTATGTGGGTCTGCCAATTGCTTACTGGGGCGTCAATTTGTACAGTGCCAAGAACTTTCCAATCTTCTCTTCACACTTGTTTGATCACCGTGGCCAGATTTATAACGTTTCGGCCATTGTGAATGACAAGTTCGAAATTGATATGGATTCTTATGACAAACAAGGGCGCATAAATTTGAGTGTTTTCTTTGCCTTGACTTATGGTATTGGTTTTGCGGCCGTTGTATCGACCCTCACGCATGTCGCCCTCTTTAACGGAAGGGAGATATATAAGCAATACCGAAGAGCTTCACACAGTGGAAAGGTAGACATACACACCAGGTTGATGAAGAAATACAAGGACATACCTAAATGGTGGTTTCATCTTATGCTTTTGTTGTCTTTGGTGCTCTCTCTGGCGCTGTGCGTTTTCATGAAAGATGAAGTGCAAATGCCATGGTGGGGACTCATTTTTGCAGCTGGACTTGCATTAATTTTCACCCTTCCAATCAGCATTATAACTGCCACCACAAATCAGTCTCCAGGACTAAACGTCATCACAGAGTACATCATGGGCTTGATATTACCTGGCAAACCAATAGCCAATGTGTGCTTCAAAACCTATGGCTACATAAGCATGTCGCAGGCAATTTCCTTTCTCAATGACTTCAAGCTAGGCCATTACATGAAGATCCCTCCCATATCAATGTTCATAGTCCAGTGCATAGGAACATTGATAGCGGGAACAGTCAATCTTGGTGTGGCATGGTGGCTGTTGTCTACCATAGAAAACATATGTCAAGATCAATTGCTCCCTCCCAATAGTCCTTGGACTTGTCCTGGTGATCGTGTGTTCTTTGATGCCTCTGTAATCTGGGGTCTGGTTGGACCAAGAAGAATTTTCGGCTCTCTCGGAAACTACAAAGCCCTCAACTGGTTCTTCCTAATAGGTGCATCGGGGCCCCTCCTGGTGTGGTTGCTGCACAAAGCTTTCCCAAGTAAGAAATGGATCAAGCTGATCAACCTCCCAGTGCTTTTGGGAGCAACAGCTGTAATGCCACCAGCTACAACTGTGAACTTCAACTGTTGGATTGTGGTTGGAGCAATTTTCAACTTCTTTGTTTTCAGATACAGAAAGAAGTGGTGGCAGAGGTACAATTATGTTCTTTCTGCTGCTTTAGATGCTGGAGTGGCTTTCATGGGGGTGCTTTTGTACTTCTCATTGACCATGAATGAGAAAAGCATATCCTGGTGGGGAACAAATGGTGAACACTGTGAGCTAGCTACTTGTCCTACAGCCAAAGGTATAGTTGTTGATGGTTGCCCTTTGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

720

Amino Acids

80.68

Weight (kDa)

9.27

Isoelectric Point (pI)

26.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003716)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09930
fragaria_vesca	FvH4_5g34010 FvH4_5g34011
malus_domestica	MD08G1206700.v1.1 MD15G1390200.v1.1 MD15G1390400.v1.1
prunus_persica	Prupe.1G539200_v2.0.a1 Prupe.1G539300_v2.0.a1
pyrus_communis	pycom15g34950 pycom15g34960
rosa_chinensis	RchiOBHm_Chr7g0233451 RchiOBHm_Chr7g0233471
rosa_laevigata	RLG00000001268 RLG00000001269
rosa_multiflora	Rmu_sc0000029.1_g000038 Rmu_sc0000029.1_g000051
rosa_roxburghii	Rroxscaffold_3G00227270 Rroxscaffold_3G00227290
rosa_rugosa	Rorug07G0280800 Rorug07G0280800
rosa_samantha	Rh7AG436600 Rh7AG436700 Rh7BG409700 Rh7BG409800 Rh7CG456500 Rh7CG456700 Rh7DG425800 Rh7DG425900
rosa_wichuraiana	Rw0G008530 Rw0G022500 Rw7G036000 Rw7G036010 Rw7G036030 Rw7G036040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	948, 1343
AarI	CACCTGC	1 cut(s)	433
Acc36I	ACCTGC	1 cut(s)	433
AccBSI	CCGCTC	1 cut(s)	160
AccI	GTMKAC	2 cut(s)	1152, 1604
AccII	CGCG	2 cut(s)	320, 726
AccIII	TCCGGA	1 cut(s)	81
AciI	CCGC	7 cut(s)	148, 158, 345, 350, 726, 1061, 1565
AclI	AACGTT	1 cut(s)	951
AclWI	GGATC	4 cut(s)	485, 498, 1510, 1841
AcoI	YGGCCR	4 cut(s)	509, 937, 957, 1062
AcsI	RAATTY	3 cut(s)	468, 1018, 1722
AcvI	CACGTG	1 cut(s)	301
AcyI	GRCGYC	1 cut(s)	876
AdeI	CACNNNGTG	1 cut(s)	1142
AfaI	GTAC	8 cut(s)	183, 482, 683, 887, 1391, 1979, 2039, 2156
AfiI	CCNNNNNNNGG	3 cut(s)	88, 1286, 1758
AgsI	TTSAA	5 cut(s)	527, 1441, 1495, 1906, 1936
AhdI	GACNNNNNGTC	1 cut(s)	1376
AjnI	CCWGG	9 cut(s)	93, 617, 631, 1163, 1366, 1411, 1663, 1791, 2072
AjuI	GAANNNNNNNTTGG	4 cut(s)	898, 930, 1421, 1453
AleI	CACNNNNGTG	1 cut(s)	443
Alw21I	GWGCWC	2 cut(s)	300, 1236
Alw26I	GTCTC	3 cut(s)	46, 535, 1368
AlwI	GGATC	4 cut(s)	485, 498, 1510, 1841
Ama87I	CYCGRG	2 cut(s)	274, 737
Aor13HI	TCCGGA	1 cut(s)	81
ApaI	GGGCCC	2 cut(s)	94, 1788
ApeKI	GCWGC	7 cut(s)	226, 609, 783, 824, 1301, 1804, 1997
ApoI	RAATTY	3 cut(s)	468, 1018, 1722
AseI	ATTAAT	1 cut(s)	1316
Asp700I	GAANNNNTTC	1 cut(s)	1132
AspLEI	GCGC	3 cut(s)	726, 1014, 1246
AsuC2I	CCSGG	3 cut(s)	275, 276, 334
AsuHPI	GGTGA	5 cut(s)	6, 923, 1315, 1679, 2102
AsuII	TTCGAA	1 cut(s)	978
AsuNHI	GCTAGC	1 cut(s)	2104
AvaI	CYCGRG	2 cut(s)	274, 737
AvaII	GGWCC	4 cut(s)	75, 278, 759, 1712
BaeGI	GKGCMC	2 cut(s)	94, 1788
BalI	TGGCCA	1 cut(s)	939
BamHI	GGATCC	1 cut(s)	490
BanII	GRGCYC	3 cut(s)	94, 547, 1788
BbrPI	CACGTG	1 cut(s)	301
Bbv12I	GWGCWC	2 cut(s)	300, 1236
BbvI	GCAGC	7 cut(s)	213, 621, 795, 836, 1313, 1791, 1984
BccI	CCATC	1 cut(s)	2135
BceAI	ACGGC	2 cut(s)	714, 1049
BcgI	CGANNNNNNTGC	2 cut(s)	208, 242
BciT130I	CCWGG	9 cut(s)	95, 619, 633, 1165, 1368, 1413, 1665, 1793, 2074
BciVI	GTATCC	2 cut(s)	417, 446
BclI	TGATCA	3 cut(s)	792, 928, 1842
BcnI	CCSGG	3 cut(s)	275, 276, 334
BcoDI	GTCTC	3 cut(s)	46, 535, 1368
BfaI	CTAG	2 cut(s)	1499, 2105
BfmI	CTRYAG	2 cut(s)	607, 2118
BfoI	RGCGCY	1 cut(s)	1247
BfuAI	ACCTGC	1 cut(s)	433
BfuI	GTATCC	2 cut(s)	417, 446
Bme18I	GGWCC	4 cut(s)	75, 278, 759, 1712
BmeRI	GACNNNNNGTC	1 cut(s)	1376
BmeT110I	CYCGRG	2 cut(s)	274, 737
BmiI	GGNNCC	8 cut(s)	92, 156, 279, 331, 492, 1785, 1786, 1787
BmrI	ACTGGG	2 cut(s)	880, 1847
BmsI	GCATC	3 cut(s)	1675, 1787, 1996
BmtI	GCTAGC	1 cut(s)	2108
BmuI	ACTGGG	2 cut(s)	880, 1847
BpmI	CTGGAG	2 cut(s)	1350, 2031
Bpu14I	TTCGAA	1 cut(s)	978
BpuMI	CCSGG	3 cut(s)	275, 276, 334
BsaAI	YACGTR	2 cut(s)	301, 484
BsaHI	GRCGYC	1 cut(s)	876
BsaI	GGTCTC	1 cut(s)	46
BsaJI	CCNNGG	9 cut(s)	93, 94, 274, 631, 736, 778, 934, 1280, 1652
BsaWI	WCCGGW	1 cut(s)	81
Bsc4I	CCNNNNNNNGG	3 cut(s)	88, 1286, 1758
Bse1I	ACTGG	6 cut(s)	68, 417, 875, 1543, 1763, 1853
BseAI	TCCGGA	1 cut(s)	81
BseBI	CCWGG	9 cut(s)	95, 619, 633, 1165, 1368, 1413, 1665, 1793, 2074
BseDI	CCNNGG	9 cut(s)	93, 94, 274, 631, 736, 778, 934, 1280, 1652
BseGI	GGATG	1 cut(s)	90
BseLI	CCNNNNNNNGG	3 cut(s)	88, 1286, 1758
BseMII	CTCAG	2 cut(s)	489, 705
BseNI	ACTGG	6 cut(s)	68, 417, 875, 1543, 1763, 1853
BseRI	GAGGAG	2 cut(s)	92, 107
BseSI	GKGCMC	2 cut(s)	94, 1788
BseX3I	CGGCCG	1 cut(s)	1062
BseXI	GCAGC	7 cut(s)	213, 621, 795, 836, 1313, 1791, 1984
BseYI	CCCAGC	2 cut(s)	675, 730
BsgI	GTGCAG	1 cut(s)	1790
Bsh1236I	CGCG	2 cut(s)	320, 726
Bsh1285I	CGRYCG	1 cut(s)	1065
BsiEI	CGRYCG	1 cut(s)	1065
BsiHKAI	GWGCWC	2 cut(s)	300, 1236
BsiHKCI	CYCGRG	2 cut(s)	274, 737
BsiSI	CCGG	4 cut(s)	82, 275, 333, 494
BslFI	GGGAC	2 cut(s)	614, 1302
BslI	CCNNNNNNNGG	3 cut(s)	88, 1286, 1758
BsmAI	GTCTC	3 cut(s)	46, 535, 1368
BsmFI	GGGAC	2 cut(s)	614, 1302
BsmI	GAATGC	1 cut(s)	328
Bso31I	GGTCTC	1 cut(s)	46
BsoBI	CYCGRG	2 cut(s)	274, 737
Bsp119I	TTCGAA	1 cut(s)	978
Bsp120I	GGGCCC	2 cut(s)	90, 1784
Bsp1286I	GDGCHC	5 cut(s)	94, 300, 547, 1236, 1788
Bsp13I	TCCGGA	1 cut(s)	81
Bsp1407I	TGTACA	1 cut(s)	885
Bsp143I	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
Bsp19I	CCATGG	1 cut(s)	1280
Bsp68I	TCGCGA	1 cut(s)	320
BspACI	CCGC	7 cut(s)	148, 158, 345, 350, 726, 1061, 1565
BspCNI	CTCAG	2 cut(s)	490, 704
BspEI	TCCGGA	1 cut(s)	81
BspFNI	CGCG	2 cut(s)	320, 726
BspHI	TCATGA	1 cut(s)	1257
BspLI	GGNNCC	8 cut(s)	92, 156, 279, 331, 492, 1785, 1786, 1787
BspMAI	CTGCAG	1 cut(s)	611
BspMI	ACCTGC	1 cut(s)	433
BspOI	GCTAGC	1 cut(s)	2108
BspPI	GGATC	4 cut(s)	485, 498, 1510, 1841
BspQI	GCTCTTC	1 cut(s)	1123
BspT104I	TTCGAA	1 cut(s)	978
BspTNI	GGTCTC	1 cut(s)	46
BsrBI	CCGCTC	1 cut(s)	160
BsrGI	TGTACA	1 cut(s)	885
BsrI	ACTGG	6 cut(s)	68, 417, 875, 1543, 1763, 1853
BssECI	CCNNGG	9 cut(s)	93, 94, 274, 631, 736, 778, 934, 1280, 1652
BssMI	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
BssNI	GRCGYC	1 cut(s)	876
BssT1I	CCWWGG	3 cut(s)	778, 1280, 1652
Bst2UI	CCWGG	9 cut(s)	95, 619, 633, 1165, 1368, 1413, 1665, 1793, 2074
Bst6I	CTCTTC	3 cut(s)	647, 919, 1123
BstACI	GRCGYC	1 cut(s)	876
BstAUI	TGTACA	1 cut(s)	885
BstBAI	YACGTR	2 cut(s)	301, 484
BstBI	TTCGAA	1 cut(s)	978
BstC8I	GCNNGC	6 cut(s)	566, 722, 728, 829, 1470, 2106
BstDEI	CTNAG	2 cut(s)	498, 691
BstDSI	CCRYGG	2 cut(s)	934, 1280
BstF5I	GGATG	1 cut(s)	90
BstFNI	CGCG	2 cut(s)	320, 726
BstH2I	RGCGCY	1 cut(s)	1247
BstHHI	GCGC	3 cut(s)	726, 1014, 1246
BstKTI	GATC	9 cut(s)	177, 493, 795, 931, 1518, 1630, 1672, 1836, 1845
BstMAI	GTCTC	3 cut(s)	46, 535, 1368
BstMBI	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
BstMCI	CGRYCG	1 cut(s)	1065
BstMWI	GCNNNNNNNGC	6 cut(s)	356, 732, 1310, 1458, 2006, 2015
BstNI	CCWGG	9 cut(s)	95, 619, 633, 1165, 1368, 1413, 1665, 1793, 2074
BstNSI	RCATGY	3 cut(s)	724, 1088, 1465
BstSFI	CTRYAG	2 cut(s)	607, 2118
BstSLI	GKGCMC	2 cut(s)	94, 1788
BstUI	CGCG	2 cut(s)	320, 726
BstV1I	GCAGC	7 cut(s)	213, 621, 795, 836, 1313, 1791, 1984
BstX2I	RGATCY	2 cut(s)	490, 1515
BstYI	RGATCY	2 cut(s)	490, 1515
BstZI	CGGCCG	1 cut(s)	1062
BsuI	GTATCC	2 cut(s)	417, 446
BtgI	CCRYGG	2 cut(s)	934, 1280
BtsCI	GGATG	1 cut(s)	90
BtsIMutI	CAGTG	5 cut(s)	895, 1147, 1550, 1860, 2095
BtuMI	TCGCGA	1 cut(s)	320
BveI	ACCTGC	1 cut(s)	433
Cac8I	GCNNGC	6 cut(s)	566, 722, 728, 829, 1470, 2106
CciI	TCATGA	1 cut(s)	1257
CfoI	GCGC	3 cut(s)	726, 1014, 1246
Cfr9I	CCCGGG	1 cut(s)	274
CseI	GACGC	4 cut(s)	100, 202, 232, 865
CsiI	ACCWGGT	1 cut(s)	1163
Csp6I	GTAC	8 cut(s)	182, 481, 682, 886, 1390, 1978, 2038, 2155
CviQI	GTAC	8 cut(s)	182, 481, 682, 886, 1390, 1978, 2038, 2155
DdeI	CTNAG	2 cut(s)	498, 691
DpnI	GATC	9 cut(s)	176, 492, 794, 930, 1517, 1629, 1671, 1835, 1844
DpnII	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
DraIII	CACNNNGTG	1 cut(s)	1142
DriI	GACNNNNNGTC	1 cut(s)	1376
EaeI	YGGCCR	4 cut(s)	509, 937, 957, 1062
EagI	CGGCCG	1 cut(s)	1062
Eam1104I	CTCTTC	3 cut(s)	647, 919, 1123
Eam1105I	GACNNNNNGTC	1 cut(s)	1376
EarI	CTCTTC	3 cut(s)	647, 919, 1123
EclXI	CGGCCG	1 cut(s)	1062
Eco130I	CCWWGG	3 cut(s)	778, 1280, 1652
Eco24I	GRGCYC	3 cut(s)	94, 547, 1788
Eco31I	GGTCTC	1 cut(s)	46
Eco32I	GATATC	1 cut(s)	309
Eco47I	GGWCC	4 cut(s)	75, 278, 759, 1712
Eco52I	CGGCCG	1 cut(s)	1062
Eco72I	CACGTG	1 cut(s)	301
Eco88I	CYCGRG	2 cut(s)	274, 737
EcoO109I	RGGNCCY	3 cut(s)	91, 1784, 1785
EcoRII	CCWGG	9 cut(s)	93, 617, 631, 1163, 1366, 1411, 1663, 1791, 2072
EcoRV	GATATC	1 cut(s)	309
EcoT14I	CCWWGG	3 cut(s)	778, 1280, 1652
EcoT38I	GRGCYC	3 cut(s)	94, 547, 1788
ErhI	CCWWGG	3 cut(s)	778, 1280, 1652
FaqI	GGGAC	2 cut(s)	614, 1302
FauI	CCCGC	3 cut(s)	338, 719, 1558
FauNDI	CATATG	1 cut(s)	1619
FbaI	TGATCA	3 cut(s)	792, 928, 1842
FblI	GTMKAC	2 cut(s)	1152, 1604
FokI	GGATG	1 cut(s)	97
FriOI	GRGCYC	3 cut(s)	94, 547, 1788
FspBI	CTAG	2 cut(s)	1499, 2105
GlaI	GCGC	3 cut(s)	725, 1013, 1245
GsaI	CCCAGC	2 cut(s)	679, 734
GsuI	CTGGAG	2 cut(s)	1350, 2031
HaeII	RGCGCY	1 cut(s)	1247
HapII	CCGG	4 cut(s)	82, 275, 333, 494
HgaI	GACGC	4 cut(s)	100, 202, 232, 865
HhaI	GCGC	3 cut(s)	726, 1014, 1246
Hin1I	GRCGYC	1 cut(s)	876
Hin6I	GCGC	3 cut(s)	724, 1012, 1244
HinP1I	GCGC	3 cut(s)	724, 1012, 1244
HincII	GTYRAC	1 cut(s)	657
HindII	GTYRAC	1 cut(s)	657
HindIII	AAGCTT	1 cut(s)	1812
HinfI	GANTC	2 cut(s)	992, 1290
HpaII	CCGG	4 cut(s)	82, 275, 333, 494
HphI	GGTGA	5 cut(s)	6, 923, 1315, 1679, 2102
Hpy166II	GTNNAC	7 cut(s)	373, 657, 682, 1153, 1605, 1900, 2093
Hpy188I	TCNGA	5 cut(s)	341, 594, 792, 1739, 1952
Hpy188III	TCNNGA	7 cut(s)	43, 82, 199, 319, 576, 1258, 1625
Hpy8I	GTNNAC	7 cut(s)	373, 657, 682, 1153, 1605, 1900, 2093
Hpy99I	CGWCG	6 cut(s)	8, 11, 53, 56, 196, 629
HpyAV	CCTTC	8 cut(s)	74, 88, 133, 145, 286, 811, 1098, 1337
HpyCH4IV	ACGT	5 cut(s)	9, 300, 483, 951, 1377
HpyF10VI	GCNNNNNNNGC	6 cut(s)	356, 732, 1310, 1458, 2006, 2015
HpyF3I	CTNAG	2 cut(s)	498, 691
HpySE526I	ACGT	5 cut(s)	9, 300, 483, 951, 1377
Hsp92I	GRCGYC	1 cut(s)	876
HspAI	GCGC	3 cut(s)	724, 1012, 1244
Kpn2I	TCCGGA	1 cut(s)	81
Ksp22I	TGATCA	3 cut(s)	792, 928, 1842
Kzo9I	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
LguI	GCTCTTC	1 cut(s)	1123
LmnI	GCTCC	7 cut(s)	154, 201, 295, 329, 1641, 1865, 1925
Lsp1109I	GCAGC	7 cut(s)	213, 621, 795, 836, 1313, 1791, 1984
LweI	GCATC	3 cut(s)	1675, 1787, 1996
MabI	ACCWGGT	1 cut(s)	1163
MaeI	CTAG	2 cut(s)	1499, 2105
MaeII	ACGT	5 cut(s)	9, 300, 483, 951, 1377
MaeIII	GTNAC	1 cut(s)	694
MalI	GATC	9 cut(s)	176, 492, 794, 930, 1517, 1629, 1671, 1835, 1844
MbiI	CCGCTC	1 cut(s)	160
MboI	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
MfeI	CAATTG	2 cut(s)	861, 1631
MflI	RGATCY	2 cut(s)	490, 1515
MhlI	GDGCHC	5 cut(s)	94, 300, 547, 1236, 1788
MlsI	TGGCCA	1 cut(s)	939
MluNI	TGGCCA	1 cut(s)	939
MlyI	GAGTC	1 cut(s)	1284
MmeI	TCCRAC	4 cut(s)	401, 1690, 1892, 1903
Mox20I	TGGCCA	1 cut(s)	939
MroI	TCCGGA	1 cut(s)	81
MroXI	GAANNNNTTC	1 cut(s)	1132
MscI	TGGCCA	1 cut(s)	939
MseI	TTAA	3 cut(s)	285, 1098, 1316
MslI	CAYNNNNRTG	5 cut(s)	170, 443, 1460, 1529, 2027
Msp20I	TGGCCA	1 cut(s)	939
MspA1I	CMGCKG	3 cut(s)	827, 1304, 1874
MspI	CCGG	4 cut(s)	82, 275, 333, 494
MunI	CAATTG	2 cut(s)	861, 1631
Mva1269I	GAATGC	1 cut(s)	328
MvaI	CCWGG	9 cut(s)	95, 619, 633, 1165, 1368, 1413, 1665, 1793, 2074
MvnI	CGCG	2 cut(s)	320, 726
MwoI	GCNNNNNNNGC	6 cut(s)	356, 732, 1310, 1458, 2006, 2015
NciI	CCSGG	3 cut(s)	275, 276, 334
NcoI	CCATGG	1 cut(s)	1280
NdeI	CATATG	1 cut(s)	1619
NdeII	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
NheI	GCTAGC	1 cut(s)	2104
NlaIV	GGNNCC	8 cut(s)	92, 156, 279, 331, 492, 1785, 1786, 1787
NmeAIII	GCCGAG	1 cut(s)	537
NmuCI	GTSAC	1 cut(s)	694
NruI	TCGCGA	1 cut(s)	320
NspI	RCATGY	3 cut(s)	724, 1088, 1465
NspV	TTCGAA	1 cut(s)	978
OliI	CACNNNNGTG	1 cut(s)	443
PaeI	GCATGC	1 cut(s)	724
PagI	TCATGA	1 cut(s)	1257
PaqCI	CACCTGC	1 cut(s)	433
PasI	CCCWGGG	1 cut(s)	94
PciSI	GCTCTTC	1 cut(s)	1123
PctI	GAATGC	1 cut(s)	328
PdmI	GAANNNNTTC	1 cut(s)	1132
PfeI	GAWTC	1 cut(s)	992
PfoI	TCCNGGA	1 cut(s)	1366
PleI	GAGTC	1 cut(s)	1284
PmaCI	CACGTG	1 cut(s)	301
PmlI	CACGTG	1 cut(s)	301
PpsI	GAGTC	1 cut(s)	1284
Ppu21I	YACGTR	2 cut(s)	301, 484
PshBI	ATTAAT	1 cut(s)	1316
PsiI	TTATAA	2 cut(s)	948, 1343
Psp1406I	AACGTT	1 cut(s)	951
Psp6I	CCWGG	9 cut(s)	93, 617, 631, 1163, 1366, 1411, 1663, 1791, 2072
PspCI	CACGTG	1 cut(s)	301
PspFI	CCCAGC	2 cut(s)	675, 730
PspGI	CCWGG	9 cut(s)	93, 617, 631, 1163, 1366, 1411, 1663, 1791, 2072
PspN4I	GGNNCC	8 cut(s)	92, 156, 279, 331, 492, 1785, 1786, 1787
PspOMI	GGGCCC	2 cut(s)	90, 1784
PstI	CTGCAG	1 cut(s)	611
PsuI	RGATCY	2 cut(s)	490, 1515
PvuII	CAGCTG	3 cut(s)	827, 1304, 1874
RruI	TCGCGA	1 cut(s)	320
RsaI	GTAC	8 cut(s)	183, 482, 683, 887, 1391, 1979, 2039, 2156
RsaNI	GTAC	8 cut(s)	182, 481, 682, 886, 1390, 1978, 2038, 2155
RseI	CAYNNNNRTG	5 cut(s)	170, 443, 1460, 1529, 2027
SapI	GCTCTTC	1 cut(s)	1123
SaqAI	TTAA	3 cut(s)	285, 1098, 1316
Sau3AI	GATC	9 cut(s)	174, 490, 792, 928, 1515, 1627, 1669, 1833, 1842
SchI	GAGTC	1 cut(s)	1284
SduI	GDGCHC	5 cut(s)	94, 300, 547, 1236, 1788
SexAI	ACCWGGT	1 cut(s)	1163
SfaNI	GCATC	3 cut(s)	1675, 1787, 1996
SfcI	CTRYAG	2 cut(s)	607, 2118
SfuI	TTCGAA	1 cut(s)	978
SinI	GGWCC	4 cut(s)	75, 278, 759, 1712
SmaI	CCCGGG	1 cut(s)	276
SmiMI	CAYNNNNRTG	5 cut(s)	170, 443, 1460, 1529, 2027
SphI	GCATGC	1 cut(s)	724
SsiI	CCGC	7 cut(s)	148, 158, 345, 350, 726, 1061, 1565
SspMI	CTAG	2 cut(s)	1499, 2105
StyI	CCWWGG	3 cut(s)	778, 1280, 1652
TaiI	ACGT	5 cut(s)	12, 303, 486, 954, 1380
TaqI	TCGA	5 cut(s)	21, 44, 170, 978, 1073
TatI	WGTACW	4 cut(s)	885, 1389, 2037, 2154
TauI	GCSGC	3 cut(s)	160, 353, 1064
TfiI	GAWTC	1 cut(s)	992
Tru1I	TTAA	3 cut(s)	285, 1098, 1316
Tru9I	TTAA	3 cut(s)	285, 1098, 1316
TscAI	CASTG	5 cut(s)	895, 1147, 1550, 1860, 2102
TseFI	GTSAC	1 cut(s)	694
TseI	GCWGC	7 cut(s)	226, 609, 783, 824, 1301, 1804, 1997
Tsp45I	GTSAC	1 cut(s)	694
TspGWI	ACGGA	4 cut(s)	167, 169, 270, 1116
TspMI	CCCGGG	1 cut(s)	274
TspRI	CASTG	5 cut(s)	895, 1147, 1550, 1860, 2102
VpaK11BI	GGWCC	4 cut(s)	75, 278, 759, 1712
VspI	ATTAAT	1 cut(s)	1316
XapI	RAATTY	3 cut(s)	468, 1018, 1722
XceI	RCATGY	3 cut(s)	724, 1088, 1465
XcmI	CCANNNNNNNNNTGG	2 cut(s)	867, 1827
XmaI	CCCGGG	1 cut(s)	274
XmiI	GTMKAC	2 cut(s)	1152, 1604
XmnI	GAANNNNTTC	1 cut(s)	1132
XspI	CTAG	2 cut(s)	1499, 2105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.